View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6014_high_17 (Length: 333)
Name: NF6014_high_17
Description: NF6014
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6014_high_17 |
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Alignment Details
Target: chr7 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 46287813 - 46287503
Alignment:
| Q |
1 |
gaaactattgatgtagtggaattcattttgtttcttggttgtacgatgatatttatgtcttagggtaacatcggtggaagaaaaattagggagaagaaaa |
100 |
Q |
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| T |
46287813 |
gaaactattgatgtagtggaattcattttgtttcttggttgtacgatgatatttatgtcttagggtaacatcggtgaaagaaaaattagggagaagaaaa |
46287714 |
T |
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| Q |
101 |
ctatttgagaggctgtgggttttccaaaactggaactattaaatttggggttgaatttttattatctttatatgtagtcatgacatgacatctatgttgg |
200 |
Q |
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| T |
46287713 |
ctatttgagaggttgtgggttttccaaaactggaactattaaatttggggttgaatttttattatctttatatgtagtcatgacatgacatctatgttgg |
46287614 |
T |
|
| Q |
201 |
caagtagccagggtaatttgcacattccagccagctatattaaattggtaatttgatttataat---aatagccatctttaactatggatggttaaatat |
297 |
Q |
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| T |
46287613 |
caagtagccagggtaatttgcacattccagccaactatattaaattggtaatttgatttataataataatagccatctttaacgttggatggttaaatat |
46287514 |
T |
|
| Q |
298 |
ggagcaaatag |
308 |
Q |
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|| ||||||| |
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| T |
46287513 |
tgaacaaatag |
46287503 |
T |
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