View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6014_high_9 (Length: 436)

Name: NF6014_high_9
Description: NF6014
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6014_high_9
NF6014_high_9
[»] chr6 (22 HSPs)
chr6 (1-368)||(30632494-30632860)
chr6 (399-436)||(3288951-3288988)
chr6 (399-435)||(1158918-1158954)
chr6 (399-435)||(3338498-3338534)
chr6 (399-435)||(11524786-11524822)
chr6 (399-435)||(24604896-24604932)
chr6 (399-435)||(29009975-29010011)
chr6 (396-436)||(29010282-29010322)
chr6 (396-435)||(17971848-17971887)
chr6 (401-435)||(11524728-11524762)
chr6 (401-435)||(33346501-33346535)
chr6 (401-435)||(35119140-35119174)
chr6 (399-436)||(8850238-8850275)
chr6 (396-436)||(18683568-18683608)
chr6 (399-435)||(24605202-24605238)
chr6 (399-435)||(25551368-25551404)
chr6 (399-431)||(25551669-25551701)
chr6 (399-435)||(31029545-31029581)
chr6 (399-435)||(33329227-33329263)
chr6 (399-435)||(33544843-33544879)
chr6 (399-435)||(33548186-33548222)
chr6 (399-435)||(35132919-35132955)
[»] chr1 (42 HSPs)
chr1 (138-367)||(36651205-36651438)
chr1 (302-355)||(13327174-13327228)
chr1 (396-435)||(6241271-6241310)
chr1 (399-436)||(10654357-10654394)
chr1 (399-435)||(11787761-11787797)
chr1 (399-435)||(16268018-16268054)
chr1 (399-435)||(21385265-21385301)
chr1 (399-435)||(23281339-23281375)
chr1 (399-435)||(29256853-29256889)
chr1 (399-435)||(33753246-33753282)
chr1 (399-435)||(35986253-35986289)
chr1 (399-435)||(36657830-36657866)
chr1 (399-435)||(50118368-50118404)
chr1 (399-435)||(50921420-50921456)
chr1 (399-435)||(51691895-51691931)
chr1 (399-435)||(52412619-52412655)
chr1 (400-435)||(24590248-24590283)
chr1 (396-435)||(37199250-37199289)
chr1 (401-435)||(32564278-32564312)
chr1 (401-435)||(49291016-49291050)
chr1 (399-436)||(7964134-7964171)
chr1 (399-432)||(9881573-9881606)
chr1 (399-436)||(24326603-24326640)
chr1 (399-436)||(25088037-25088074)
chr1 (399-436)||(29021603-29021640)
chr1 (402-435)||(32517629-32517662)
chr1 (399-436)||(34028742-34028779)
chr1 (399-436)||(34029049-34029086)
chr1 (399-435)||(4045120-4045156)
chr1 (399-435)||(9119313-9119349)
chr1 (399-435)||(10923383-10923419)
chr1 (399-435)||(10923692-10923728)
chr1 (396-436)||(15073927-15073967)
chr1 (399-435)||(16267736-16267772)
chr1 (399-435)||(18793712-18793748)
chr1 (399-435)||(19886003-19886039)
chr1 (396-436)||(29022549-29022589)
chr1 (396-436)||(32193995-32194035)
chr1 (399-435)||(45305738-45305774)
chr1 (399-435)||(50574846-50574882)
chr1 (399-435)||(50921081-50921117)
chr1 (396-436)||(52750180-52750220)
[»] chr7 (21 HSPs)
chr7 (397-435)||(23437171-23437209)
chr7 (399-435)||(8769611-8769647)
chr7 (399-435)||(11679031-11679067)
chr7 (399-435)||(31715950-31715986)
chr7 (399-435)||(48704137-48704173)
chr7 (401-436)||(35086068-35086103)
chr7 (397-436)||(38842349-38842388)
chr7 (401-435)||(34568606-34568640)
chr7 (300-344)||(22357979-22358024)
chr7 (399-436)||(30474297-30474334)
chr7 (400-436)||(473214-473250)
chr7 (400-436)||(14682994-14683030)
chr7 (396-436)||(14708237-14708277)
chr7 (399-435)||(19543511-19543547)
chr7 (399-435)||(21522241-21522277)
chr7 (399-435)||(21522545-21522581)
chr7 (399-435)||(23472885-23472921)
chr7 (399-435)||(35085760-35085796)
chr7 (399-435)||(40740050-40740086)
chr7 (399-435)||(43140719-43140755)
chr7 (399-435)||(47305148-47305184)
[»] chr8 (28 HSPs)
chr8 (399-436)||(5417141-5417178)
chr8 (399-436)||(9495082-9495119)
chr8 (398-435)||(44254885-44254922)
chr8 (399-435)||(758365-758401)
chr8 (399-435)||(1826120-1826156)
chr8 (399-435)||(1860565-1860601)
chr8 (399-435)||(3868965-3869001)
chr8 (399-435)||(7041953-7041989)
chr8 (399-435)||(14920740-14920776)
chr8 (399-435)||(24456755-24456791)
chr8 (399-435)||(40094496-40094532)
chr8 (401-435)||(21515529-21515563)
chr8 (396-430)||(44678547-44678581)
chr8 (402-435)||(7041653-7041686)
chr8 (400-433)||(26736147-26736180)
chr8 (399-436)||(44678338-44678375)
chr8 (399-435)||(119445-119481)
chr8 (399-435)||(3869278-3869314)
chr8 (300-367)||(6271563-6271630)
chr8 (396-436)||(22013952-22013992)
chr8 (399-435)||(24456981-24457017)
chr8 (399-435)||(30872804-30872840)
chr8 (399-435)||(31230634-31230670)
chr8 (399-435)||(31230942-31230978)
chr8 (399-435)||(37393498-37393534)
chr8 (399-435)||(37393806-37393842)
chr8 (399-435)||(39912248-39912284)
chr8 (399-435)||(40040183-40040219)
[»] chr5 (33 HSPs)
chr5 (399-436)||(5087828-5087865)
chr5 (399-436)||(10656115-10656152)
chr5 (399-436)||(19205271-19205308)
chr5 (399-436)||(35263515-35263552)
chr5 (399-435)||(5152944-5152980)
chr5 (399-435)||(7399098-7399134)
chr5 (399-435)||(31656379-31656415)
chr5 (399-435)||(42710679-42710715)
chr5 (400-435)||(7210774-7210809)
chr5 (401-436)||(15267568-15267603)
chr5 (400-435)||(28392099-28392134)
chr5 (396-435)||(40589383-40589422)
chr5 (396-435)||(40589986-40590025)
chr5 (402-435)||(9692942-9692975)
chr5 (399-436)||(16920486-16920523)
chr5 (399-436)||(37192472-37192509)
chr5 (399-436)||(42766838-42766875)
chr5 (399-435)||(5460275-5460311)
chr5 (399-435)||(7399407-7399443)
chr5 (399-435)||(8418513-8418549)
chr5 (399-435)||(10656423-10656459)
chr5 (399-435)||(12695015-12695051)
chr5 (399-435)||(15476287-15476323)
chr5 (399-435)||(15476588-15476624)
chr5 (399-431)||(16353487-16353519)
chr5 (396-436)||(16669524-16669564)
chr5 (399-435)||(17736576-17736612)
chr5 (399-435)||(19204965-19205001)
chr5 (399-435)||(21750831-21750867)
chr5 (399-435)||(26289041-26289077)
chr5 (399-435)||(29023958-29023994)
chr5 (399-435)||(33762923-33762959)
chr5 (399-435)||(38384889-38384925)
[»] chr4 (34 HSPs)
chr4 (399-436)||(33626192-33626229)
chr4 (399-436)||(40067676-40067713)
chr4 (399-436)||(46535544-46535581)
chr4 (399-435)||(1205399-1205435)
chr4 (399-435)||(21217868-21217904)
chr4 (399-435)||(21218176-21218212)
chr4 (399-435)||(29864197-29864233)
chr4 (399-435)||(29864504-29864540)
chr4 (399-435)||(33625885-33625921)
chr4 (399-435)||(33882278-33882314)
chr4 (399-435)||(34958853-34958889)
chr4 (399-435)||(37515782-37515818)
chr4 (399-435)||(52914973-52915009)
chr4 (399-435)||(54136112-54136148)
chr4 (400-435)||(25058855-25058890)
chr4 (396-435)||(27347926-27347965)
chr4 (396-435)||(45911597-45911636)
chr4 (399-436)||(11815881-11815918)
chr4 (399-436)||(38866419-38866456)
chr4 (398-435)||(43316899-43316936)
chr4 (402-435)||(43317208-43317241)
chr4 (399-436)||(43969575-43969612)
chr4 (399-436)||(44428534-44428571)
chr4 (399-436)||(44710424-44710461)
chr4 (399-436)||(52915271-52915308)
chr4 (396-436)||(1098396-1098436)
chr4 (399-435)||(1157535-1157571)
chr4 (399-435)||(2738901-2738937)
chr4 (399-435)||(9010834-9010870)
chr4 (399-435)||(10014486-10014522)
chr4 (399-435)||(10021627-10021663)
chr4 (399-435)||(25218105-25218141)
chr4 (399-435)||(48209969-48210005)
chr4 (399-435)||(53645472-53645508)
[»] chr3 (38 HSPs)
chr3 (398-435)||(26332652-26332689)
chr3 (396-436)||(967479-967519)
chr3 (399-435)||(12123408-12123444)
chr3 (399-435)||(28688319-28688355)
chr3 (399-435)||(34521586-34521622)
chr3 (399-435)||(40410733-40410769)
chr3 (399-435)||(41208422-41208458)
chr3 (399-435)||(41208729-41208765)
chr3 (399-435)||(45871718-45871754)
chr3 (399-435)||(52606149-52606185)
chr3 (399-435)||(54107690-54107726)
chr3 (400-435)||(7937665-7937700)
chr3 (399-436)||(8846404-8846441)
chr3 (399-436)||(10756739-10756776)
chr3 (398-435)||(19124501-19124538)
chr3 (402-435)||(26332343-26332376)
chr3 (399-436)||(43527044-43527081)
chr3 (399-436)||(44069144-44069181)
chr3 (399-436)||(54831876-54831913)
chr3 (399-435)||(4846925-4846961)
chr3 (399-435)||(7743094-7743130)
chr3 (399-435)||(14353067-14353103)
chr3 (399-435)||(14353376-14353412)
chr3 (399-435)||(27940293-27940329)
chr3 (399-435)||(31514191-31514227)
chr3 (399-435)||(34521287-34521323)
chr3 (399-435)||(34630003-34630039)
chr3 (399-435)||(35580278-35580314)
chr3 (399-435)||(35753760-35753796)
chr3 (399-435)||(40969276-40969312)
chr3 (399-435)||(41997840-41997876)
chr3 (399-435)||(41998143-41998179)
chr3 (399-435)||(45171396-45171432)
chr3 (399-435)||(45872018-45872054)
chr3 (399-435)||(51883880-51883916)
chr3 (399-435)||(52609691-52609727)
chr3 (399-435)||(53678762-53678798)
chr3 (399-435)||(54081613-54081649)
[»] chr2 (41 HSPs)
chr2 (399-436)||(16260892-16260929)
chr2 (399-436)||(16261198-16261235)
chr2 (399-436)||(34127892-34127929)
chr2 (398-435)||(41377374-41377411)
chr2 (399-435)||(4104180-4104216)
chr2 (399-435)||(4120785-4120821)
chr2 (399-435)||(13354198-13354234)
chr2 (399-435)||(16736122-16736158)
chr2 (399-435)||(25642597-25642633)
chr2 (399-435)||(27132532-27132568)
chr2 (399-435)||(38275498-38275534)
chr2 (399-435)||(39912648-39912684)
chr2 (399-435)||(43183604-43183640)
chr2 (396-435)||(1580170-1580209)
chr2 (399-433)||(3603525-3603559)
chr2 (397-435)||(37744717-37744755)
chr2 (300-344)||(21419102-21419147)
chr2 (399-436)||(31450687-31450724)
chr2 (399-436)||(31450994-31451031)
chr2 (399-436)||(34820607-34820644)
chr2 (399-435)||(4104488-4104524)
chr2 (399-435)||(5921715-5921751)
chr2 (399-435)||(12303806-12303842)
chr2 (399-435)||(13354506-13354542)
chr2 (399-435)||(17856220-17856256)
chr2 (399-435)||(18565332-18565368)
chr2 (400-436)||(18950758-18950794)
chr2 (399-435)||(25642289-25642325)
chr2 (399-435)||(27883489-27883525)
chr2 (399-435)||(28202881-28202917)
chr2 (399-435)||(28203189-28203225)
chr2 (399-435)||(28631295-28631331)
chr2 (399-435)||(34820300-34820336)
chr2 (300-344)||(35370677-35370721)
chr2 (399-435)||(37412907-37412943)
chr2 (399-435)||(37744470-37744506)
chr2 (399-435)||(39454472-39454508)
chr2 (399-435)||(41659766-41659802)
chr2 (399-435)||(43183912-43183948)
chr2 (396-436)||(43820328-43820368)
chr2 (399-435)||(44915761-44915797)
[»] scaffold0809 (1 HSPs)
scaffold0809 (399-435)||(4647-4683)
[»] scaffold0236 (1 HSPs)
scaffold0236 (399-435)||(11543-11579)
[»] scaffold0444 (1 HSPs)
scaffold0444 (399-436)||(11660-11697)
[»] scaffold0188 (1 HSPs)
scaffold0188 (402-435)||(13870-13903)
[»] scaffold0168 (1 HSPs)
scaffold0168 (399-435)||(11816-11852)
[»] scaffold0051 (1 HSPs)
scaffold0051 (399-435)||(40681-40717)
[»] scaffold0016 (1 HSPs)
scaffold0016 (399-435)||(90826-90862)


Alignment Details
Target: chr6 (Bit Score: 239; Significance: 1e-132; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 368
Target Start/End: Complemental strand, 30632860 - 30632494
Alignment:
Q  1 taactatatataatccttaacaggaaaaaagaaagtgaagttttgtctacaatttacagatgaattcaaatatttaactagaattttaatttatgattcc 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||| |    
T  30632860 taactatatataatccttaacaggaaaaaagaaagcgaagttttgtctacaatttacagatgaatttaaatctttaactagaatttcaatttatgatttc 30632761  T
Q  101 tttgttgttattgtgttcagaatgttgaatcattacatgtgattatgtttgtgcgctctcagccaccgcctaacgattcactactcacaatttcattgtc 200  Q
    || ||||||||| || | ||||| |||| |||||||||| |||||||||||||||||||| || |||||| ||||||||||||||||| ||| |||||||    
T  30632760 tt-gttgttattatgctaagaattttgattcattacatgcgattatgtttgtgcgctctctgcgaccgcccaacgattcactactcactattacattgtc 30632662  T
Q  201 aattcattctcatatgcttgtattcatttttaatatttttatttatccactatccnnnnnnnnnnttaatcttgtcattttttaaaaagcctcgaagtcc 300  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||          ||| ||  |||||||||||||||||||||||||||    
T  30632661 aattcattctcatatgcttgtattcatttttaata-ttttatttatccactatccaaaaaaaaaattagtcccgtcattttttaaaaagcctcgaagtcc 30632563  T
Q  301 tcatctttcttatatcttgaaatttc-ttaaaattttgaatatatattaactttaattatatcttatag 368  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  30632562 tcatctttcttatatcttgaaatttctttaaaattttgaatatatattaactttaattatatcttatag 30632494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 3288951 - 3288988
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  3288951 ccttaactatttaggtagtatcgctttggtcccttaac 3288988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 1158954 - 1158918
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  1158954 ccttaactatttaagtagtatcgctttggtcccttaa 1158918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 3338498 - 3338534
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  3338498 ccttaactatttaggtagtatcgctttggtcccttaa 3338534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 11524786 - 11524822
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  11524786 ccttaactatttaggtagtatcgctttggtcccttaa 11524822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 24604896 - 24604932
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  24604896 ccttaactatttaggtagtatcgctttggtcccttaa 24604932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 29009975 - 29010011
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  29009975 ccttaactatttacgtagtatcgctttggtcccttaa 29010011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 396 - 436
Target Start/End: Complemental strand, 29010322 - 29010282
Alignment:
Q  396 gttccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||| |||||||||||||||||||| ||||||||||||    
T  29010322 gttccttgactatttatgtagtatcgctgtggtcccttaac 29010282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 435
Target Start/End: Complemental strand, 17971887 - 17971848
Alignment:
Q  396 gttccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  17971887 gttccttaactattttagtagtatcgctttggtcccttaa 17971848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 401 - 435
Target Start/End: Original strand, 11524728 - 11524762
Alignment:
Q  401 ttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||| |||||||||||||||||||||||    
T  11524728 ttaactatttaggtagtatcgctttggtcccttaa 11524762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 401 - 435
Target Start/End: Original strand, 33346501 - 33346535
Alignment:
Q  401 ttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||| |||||||||||||||||||||||    
T  33346501 ttaactatttaggtagtatcgctttggtcccttaa 33346535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 401 - 435
Target Start/End: Complemental strand, 35119174 - 35119140
Alignment:
Q  401 ttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||| |||||||||||||||||||||||    
T  35119174 ttaactatttaggtagtatcgctttggtcccttaa 35119140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 8850238 - 8850275
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    |||||||||||||| ||||||| |||||||||||||||    
T  8850238 ccttaactatttatttagtatcactttggtcccttaac 8850275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 436
Target Start/End: Original strand, 18683568 - 18683608
Alignment:
Q  396 gttccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||||||  | |||||||||||||||||||||    
T  18683568 gttccttaactatttaattggtatcgctttggtcccttaac 18683608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 24605238 - 24605202
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| ||||||||| |||||||||||||    
T  24605238 ccttaactatttaggtagtatcgatttggtcccttaa 24605202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 25551368 - 25551404
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  25551368 ccttaactatttaggtagtattgctttggtcccttaa 25551404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 431
Target Start/End: Complemental strand, 25551701 - 25551669
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtccc 431  Q
    ||||||||||||| |||||||||||||||||||    
T  25551701 ccttaactatttaagtagtatcgctttggtccc 25551669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 31029545 - 31029581
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||| |||||| |||||||||||||||||||||||    
T  31029545 ccttaattatttaggtagtatcgctttggtcccttaa 31029581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 33329227 - 33329263
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  33329227 ccttaactatttaggtagtattgctttggtcccttaa 33329263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 33544843 - 33544879
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  33544843 ccttaactatttaagtagtattgctttggtcccttaa 33544879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 33548222 - 33548186
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  33548222 ccttaactatttaggtagtatcgctttggccccttaa 33548186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 35132955 - 35132919
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  35132955 ccttaactatttaggtagtaccgctttggtcccttaa 35132919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 5e-23; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 138 - 367
Target Start/End: Complemental strand, 36651438 - 36651205
Alignment:
Q  138 tgtgattatgtttgtgcgctctcagccaccgcctaacgattcactactcacaatttcattgtcaattcattctcatatgcttgtattcattt--ttaata 235  Q
    ||||||||||||| ||| |||||||||||| || ||| ||||||| ||||||||||||| ||||| ||||||||||||| ||| |||  |||  ||||||    
T  36651438 tgtgattatgtttttgcactctcagccaccacccaacaattcactgctcacaatttcatcgtcaactcattctcatatgtttggatttttttgtttaata 36651339  T
Q  236 tttttatttatccactatccnnnnnnnnnnttaatcttgtcattttttaaaaagcctcgaagtcctcatctttcttatatct---tgaaatttcttaaaa 332  Q
    |||   ||| ||||||||            ||| ||| ||| || | || |||||||| ||||||||||||||||||||| |   |||||||||||||||    
T  36651338 tttcc-tttctccactatttaaaaatcattttagtctcgtcgttctctataaagcctcaaagtcctcatctttcttatatatctttgaaatttcttaaaa 36651240  T
Q  333 ttttgaatatatattaactttaattatatcttata 367  Q
     |||| |||||||||||||| |||| |||||||||    
T  36651239 ctttgtatatatattaacttcaattttatcttata 36651205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 302 - 355
Target Start/End: Original strand, 13327174 - 13327228
Alignment:
Q  302 catctttcttatatc-ttgaaatttcttaaaattttgaatatatattaactttaa 355  Q
    ||||||||||||||  ||||||||||||||||||||| |||||||||||||||||    
T  13327174 catctttcttatatggttgaaatttcttaaaattttggatatatattaactttaa 13327228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 396 - 435
Target Start/End: Original strand, 6241271 - 6241310
Alignment:
Q  396 gttccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  6241271 gttccttaactatttatttagtatcgctttggtcccttaa 6241310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 10654394 - 10654357
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  10654394 ccttaactatttaggtagtatcgctttggtcccttaac 10654357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 11787761 - 11787797
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  11787761 ccttaactatttaggtagtatcgctttggtcccttaa 11787797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 16268054 - 16268018
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  16268054 ccttaactatttaggtagtatcgctttggtcccttaa 16268018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 21385301 - 21385265
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  21385301 ccttaactatttaagtagtatcgctttggtcccttaa 21385265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 23281375 - 23281339
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  23281375 ccttaactatttaggtagtatcgctttggtcccttaa 23281339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 29256853 - 29256889
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  29256853 ccttaactatttaggtagtatcgctttggtcccttaa 29256889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 33753246 - 33753282
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  33753246 ccttaactatttaggtagtatcgctttggtcccttaa 33753282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 35986253 - 35986289
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  35986253 ccttaactatttaggtagtatcgctttggtcccttaa 35986289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 36657866 - 36657830
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||||| |||||||||||||||||||||    
T  36657866 ccttaactatttatgcagtatcgctttggtcccttaa 36657830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 50118368 - 50118404
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  50118368 ccttaactatttaggtagtatcgctttggtcccttaa 50118404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 50921456 - 50921420
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  50921456 ccttaactatttaggtagtatcgctttggtcccttaa 50921420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 51691895 - 51691931
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  51691895 ccttaactatttaggtagtatcgctttggtcccttaa 51691931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 52412619 - 52412655
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  52412619 ccttaactatttaggtagtatcgctttggtcccttaa 52412655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 435
Target Start/End: Original strand, 24590248 - 24590283
Alignment:
Q  400 cttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||||||||| |||||||||||||||||||||||    
T  24590248 cttaactatttaagtagtatcgctttggtcccttaa 24590283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 435
Target Start/End: Complemental strand, 37199289 - 37199250
Alignment:
Q  396 gttccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||||||||||||| |||||||| ||||||||||||||    
T  37199289 gttccttaactatttaggtagtatcactttggtcccttaa 37199250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 401 - 435
Target Start/End: Complemental strand, 32564312 - 32564278
Alignment:
Q  401 ttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||| |||||||||||||||||||||||    
T  32564312 ttaactatttaggtagtatcgctttggtcccttaa 32564278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 401 - 435
Target Start/End: Original strand, 49291016 - 49291050
Alignment:
Q  401 ttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||| |||||||||||||||||||||||    
T  49291016 ttaactatttaggtagtatcgctttggtcccttaa 49291050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 7964134 - 7964171
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    |||||||||||||| | |||||||||||||||||||||    
T  7964134 ccttaactatttatttggtatcgctttggtcccttaac 7964171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 432
Target Start/End: Original strand, 9881573 - 9881606
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtccct 432  Q
    ||||||||||||| ||||||||||||||||||||    
T  9881573 ccttaactatttaggtagtatcgctttggtccct 9881606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 24326603 - 24326640
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    |||||||||||||| | |||||||||||||||||||||    
T  24326603 ccttaactatttatttggtatcgctttggtcccttaac 24326640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 25088037 - 25088074
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  25088037 ccttaactatttaggtagtatcgctttggtcctttaac 25088074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 29021603 - 29021640
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    |||||||||||||| | |||||||||||||||||||||    
T  29021603 ccttaactatttatttggtatcgctttggtcccttaac 29021640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 435
Target Start/End: Original strand, 32517629 - 32517662
Alignment:
Q  402 taactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||||||| |||||||||||||||||||||||    
T  32517629 taactatttaggtagtatcgctttggtcccttaa 32517662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 34028742 - 34028779
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  34028742 ccttaactatttaggtagtatcactttggtcccttaac 34028779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 34029086 - 34029049
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  34029086 ccttaactatttaggtagtatcactttggtcccttaac 34029049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 4045120 - 4045156
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| ||||||||| |||||||||||||    
T  4045120 ccttaactatttaggtagtatcgttttggtcccttaa 4045156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 9119313 - 9119349
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||| ||| |||||||||||||||||||||||    
T  9119313 ccttaactacttaggtagtatcgctttggtcccttaa 9119349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 10923383 - 10923419
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||| |||||| |||||||||||||||||||||||    
T  10923383 ccttaattatttaggtagtatcgctttggtcccttaa 10923419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 10923728 - 10923692
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| || ||||||||||||||||||||    
T  10923728 ccttaactatttaagtggtatcgctttggtcccttaa 10923692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 436
Target Start/End: Complemental strand, 15073967 - 15073927
Alignment:
Q  396 gttccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||||||  | |||||||||||||||||||||    
T  15073967 gttccttaactatttaattggtatcgctttggtcccttaac 15073927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 16267736 - 16267772
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  16267736 ccttaactatttaggtaatatcgctttggtcccttaa 16267772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 18793712 - 18793748
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||| |||||| |||||||||||||||||||||||    
T  18793712 ccttaattatttaggtagtatcgctttggtcccttaa 18793748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 19886003 - 19886039
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  19886003 ccttaactatttttgtagtatcgctttggttccttaa 19886039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 436
Target Start/End: Complemental strand, 29022589 - 29022549
Alignment:
Q  396 gttccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||||||| | ||||| |||||||||||||||    
T  29022589 gttccttaactatttatttggtatcactttggtcccttaac 29022549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 436
Target Start/End: Complemental strand, 32194035 - 32193995
Alignment:
Q  396 gttccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||||||  | |||||||||||||||||||||    
T  32194035 gttccttaactatttaattggtatcgctttggtcccttaac 32193995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 45305774 - 45305738
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  45305774 ccttaactatttaggtagtatcactttggtcccttaa 45305738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 50574882 - 50574846
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| ||||||||| |||||||||||||    
T  50574882 ccttaactatttaggtagtatcgttttggtcccttaa 50574846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 50921081 - 50921117
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  50921081 ccttaactatttaggtagtatcactttggtcccttaa 50921117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 436
Target Start/End: Original strand, 52750180 - 52750220
Alignment:
Q  396 gttccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    |||||| |||||||||| | |||||||||||||||||||||    
T  52750180 gttcctcaactatttatttggtatcgctttggtcccttaac 52750220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000002; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 435
Target Start/End: Original strand, 23437171 - 23437209
Alignment:
Q  397 ttccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  23437171 ttccttaactatttaggtagtatcgctttggtcccttaa 23437209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 8769647 - 8769611
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  8769647 ccttaactatttaggtagtatcgctttggtcccttaa 8769611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 11679067 - 11679031
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  11679067 ccttaactatttaagtagtatcgctttggtcccttaa 11679031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 31715986 - 31715950
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  31715986 ccttaactatttaggtagtatcgctttggtcccttaa 31715950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 48704173 - 48704137
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  48704173 ccttaactatttaggtagtatcgctttggtcccttaa 48704137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 436
Target Start/End: Complemental strand, 35086103 - 35086068
Alignment:
Q  401 ttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||| ||||||||||||||||||||||||    
T  35086103 ttaactatttaggtagtatcgctttggtcccttaac 35086068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 436
Target Start/End: Complemental strand, 38842388 - 38842349
Alignment:
Q  397 ttccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  38842388 ttccttaactatttaggtagcatcgctttggtcccttaac 38842349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 401 - 435
Target Start/End: Original strand, 34568606 - 34568640
Alignment:
Q  401 ttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||| |||||||||||||||||||||||    
T  34568606 ttaactatttaggtagtatcgctttggtcccttaa 34568640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 344
Target Start/End: Original strand, 22357979 - 22358024
Alignment:
Q  300 ctcatctttcttatat-cttgaaatttcttaaaattttgaatatat 344  Q
    |||||||||||||||| | |||||||||||| ||||||||||||||    
T  22357979 ctcatctttcttatattcgtgaaatttcttataattttgaatatat 22358024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 30474297 - 30474334
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    |||||||||||||| | |||||||||||||||||||||    
T  30474297 ccttaactatttatctggtatcgctttggtcccttaac 30474334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 436
Target Start/End: Original strand, 473214 - 473250
Alignment:
Q  400 cttaactatttatgtagtatcgctttggtcccttaac 436  Q
    |||||||||||| | ||||||||||||||||||||||    
T  473214 cttaactatttaggcagtatcgctttggtcccttaac 473250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 436
Target Start/End: Complemental strand, 14683030 - 14682994
Alignment:
Q  400 cttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||| | |||||||||||||||||||||    
T  14683030 cttaactatttatttggtatcgctttggtcccttaac 14682994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 436
Target Start/End: Original strand, 14708237 - 14708277
Alignment:
Q  396 gttccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||||||  | |||||||||||||||||||||    
T  14708237 gttccttaactatttaatttgtatcgctttggtcccttaac 14708277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 19543511 - 19543547
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||||||||||| ||||||||||||| ||||||||    
T  19543511 ccttaactatttatttagtatcgctttgatcccttaa 19543547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 21522241 - 21522277
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||| |||||| |||||||||||||||||||||||    
T  21522241 ccttaattatttaggtagtatcgctttggtcccttaa 21522277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 21522581 - 21522545
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||| ||||||||||||||||||    
T  21522581 ccttaactatttaggtagcatcgctttggtcccttaa 21522545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 23472921 - 23472885
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  23472921 ccttaactatttaggtagtttcgctttggtcccttaa 23472885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 35085760 - 35085796
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  35085760 ccttaactatttaggtagtatcgctttggtcctttaa 35085796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 40740086 - 40740050
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||| ||||||| ||||||||||||||||||||||    
T  40740086 ccttaattatttatttagtatcgctttggtcccttaa 40740050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 43140719 - 43140755
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||||||||||  ||||||||||||||||||||||    
T  43140719 ccttaactatttagatagtatcgctttggtcccttaa 43140755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 47305148 - 47305184
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||||||||||  ||||||||||||||||||||||    
T  47305148 ccttaactatttaattagtatcgctttggtcccttaa 47305184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000006; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 5417178 - 5417141
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  5417178 ccttaactatttaggtagtatcgctttggtcccttaac 5417141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 9495082 - 9495119
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  9495082 ccttaactatttatgtagtatcgctttggtctcttaac 9495119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 398 - 435
Target Start/End: Original strand, 44254885 - 44254922
Alignment:
Q  398 tccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||||||||||| |||||||||||||||||||||||    
T  44254885 tccttaactatttaagtagtatcgctttggtcccttaa 44254922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 758365 - 758401
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  758365 ccttaactatttaggtagtatcgctttggtcccttaa 758401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 1826156 - 1826120
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  1826156 ccttaactatttaggtagtatcgctttggtcccttaa 1826120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 1860601 - 1860565
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  1860601 ccttaactatttaggtagtatcgctttggtcccttaa 1860565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 3868965 - 3869001
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||||||||||||||||||| ||||||||||||||    
T  3868965 ccttaactatttatgtagtatcactttggtcccttaa 3869001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 7041989 - 7041953
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||||||||||| ||||||||||||||||||||||    
T  7041989 ccttaactatttatatagtatcgctttggtcccttaa 7041953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 14920776 - 14920740
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  14920776 ccttaactatttaagtagtatcgctttggtcccttaa 14920740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 24456755 - 24456791
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  24456755 ccttaactatttaggtagtatcgctttggtcccttaa 24456791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 40094496 - 40094532
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  40094496 ccttaactatttaggtagtatcgctttggtcccttaa 40094532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 401 - 435
Target Start/End: Complemental strand, 21515563 - 21515529
Alignment:
Q  401 ttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||| |||||||||||||||||||||||    
T  21515563 ttaactatttacgtagtatcgctttggtcccttaa 21515529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 430
Target Start/End: Complemental strand, 44678581 - 44678547
Alignment:
Q  396 gttccttaactatttatgtagtatcgctttggtcc 430  Q
    |||||||||||||||| ||||||||||||||||||    
T  44678581 gttccttaactatttaggtagtatcgctttggtcc 44678547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 435
Target Start/End: Original strand, 7041653 - 7041686
Alignment:
Q  402 taactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||||||| |||||||||||||||||||||||    
T  7041653 taactatttaggtagtatcgctttggtcccttaa 7041686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 433
Target Start/End: Original strand, 26736147 - 26736180
Alignment:
Q  400 cttaactatttatgtagtatcgctttggtccctt 433  Q
    |||||||||||| |||||||||||||||||||||    
T  26736147 cttaactatttaggtagtatcgctttggtccctt 26736180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 44678338 - 44678375
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  44678338 ccttaactatttaggtagtattgctttggtcccttaac 44678375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 119481 - 119445
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  119481 ccttaactatttaggtagtatcgctttagtcccttaa 119445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 3869314 - 3869278
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| ||||||||| |||||||||||||    
T  3869314 ccttaactatttaggtagtatcgttttggtcccttaa 3869278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 367
Target Start/End: Original strand, 6271563 - 6271630
Alignment:
Q  300 ctcatctttcttatatc-ttgaaatttcttaaaattttgaatatatattaactttaattatatcttata 367  Q
    ||||||| | ||||||| |||||||||||||||| |||| || ||| |||||||||||||| |||||||    
T  6271563 ctcatctcttttatatcgttgaaatttcttaaaa-tttggatgtattttaactttaattatctcttata 6271630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 436
Target Start/End: Complemental strand, 22013992 - 22013952
Alignment:
Q  396 gttccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||||||  | |||||||||||||||||||||    
T  22013992 gttccttaactatttaattggtatcgctttggtcccttaac 22013952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 24457017 - 24456981
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  24457017 ccttaactatttaggtagtatcgccttggtcccttaa 24456981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 30872804 - 30872840
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  30872804 ccttaactatttaggtagtattgctttggtcccttaa 30872840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 31230634 - 31230670
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  31230634 ccttaactatttaggtagtatcactttggtcccttaa 31230670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 31230978 - 31230942
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  31230978 ccttaactatttaggtagtattgctttggtcccttaa 31230942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 37393498 - 37393534
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| ||||||||| |||||||||||||    
T  37393498 ccttaactatttaggtagtatcgttttggtcccttaa 37393534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 37393842 - 37393806
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||| ||||||||    
T  37393842 ccttaactatttaggtagtatcgctttgatcccttaa 37393806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 39912284 - 39912248
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  39912284 ccttaactatttaggtagtatcactttggtcccttaa 39912248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 40040183 - 40040219
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  40040183 ccttaactatttaggtagtatcgctttggtaccttaa 40040219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000006; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 5087828 - 5087865
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  5087828 ccttaactatttaggtagtatcgctttggtcccttaac 5087865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 10656115 - 10656152
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  10656115 ccttaactatttaggtagtatcgctttggtcccttaac 10656152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 19205308 - 19205271
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  19205308 ccttaactatttaggtagtatcgctttggtcccttaac 19205271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 35263515 - 35263552
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  35263515 ccttaactatttaggtagtatcgctttggtcccttaac 35263552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 5152980 - 5152944
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||||||||||| ||||||||||||||||||||||    
T  5152980 ccttaactatttatttagtatcgctttggtcccttaa 5152944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 7399098 - 7399134
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  7399098 ccttaactatttaggtagtatcgctttggtcccttaa 7399134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 31656379 - 31656415
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  31656379 ccttaactatttaggtagtatcgctttggtcccttaa 31656415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 42710715 - 42710679
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  42710715 ccttaactatttaggtagtatcgctttggtcccttaa 42710679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 435
Target Start/End: Complemental strand, 7210809 - 7210774
Alignment:
Q  400 cttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||||||||| |||||||||||||||||||||||    
T  7210809 cttaactatttaggtagtatcgctttggtcccttaa 7210774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 436
Target Start/End: Complemental strand, 15267603 - 15267568
Alignment:
Q  401 ttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||| ||||||||||||||||||||||||    
T  15267603 ttaactatttaggtagtatcgctttggtcccttaac 15267568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 435
Target Start/End: Complemental strand, 28392134 - 28392099
Alignment:
Q  400 cttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||||||||| |||||||||||||||||||||||    
T  28392134 cttaactatttaggtagtatcgctttggtcccttaa 28392099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 435
Target Start/End: Complemental strand, 40589422 - 40589383
Alignment:
Q  396 gttccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||||||||||||| ||||||||| |||||||||||||    
T  40589422 gttccttaactatttaggtagtatcgttttggtcccttaa 40589383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 435
Target Start/End: Complemental strand, 40590025 - 40589986
Alignment:
Q  396 gttccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||||||||||||| ||||||||| |||||||||||||    
T  40590025 gttccttaactatttaggtagtatcgttttggtcccttaa 40589986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 435
Target Start/End: Original strand, 9692942 - 9692975
Alignment:
Q  402 taactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||||||| |||||||||||||||||||||||    
T  9692942 taactatttaggtagtatcgctttggtcccttaa 9692975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 16920523 - 16920486
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    |||||||||||||| | |||||||||||||||||||||    
T  16920523 ccttaactatttatttggtatcgctttggtcccttaac 16920486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 37192509 - 37192472
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    |||||||||||||| | |||||||||||||||||||||    
T  37192509 ccttaactatttatttggtatcgctttggtcccttaac 37192472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 42766838 - 42766875
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    |||||||||||||| | |||||||||||||||||||||    
T  42766838 ccttaactatttatttggtatcgctttggtcccttaac 42766875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 5460311 - 5460275
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||||||||||  ||||||||||||||||||||||    
T  5460311 ccttaactatttagatagtatcgctttggtcccttaa 5460275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 7399443 - 7399407
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||| |||||| |||||||||||||||||||||||    
T  7399443 ccttaattatttaggtagtatcgctttggtcccttaa 7399407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 8418549 - 8418513
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  8418549 ccttaactatttaggtagtatcgctttggtccgttaa 8418513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 10656459 - 10656423
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  10656459 ccttaactatttaggtagtatcgctttggtcctttaa 10656423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 12695051 - 12695015
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  12695051 ccttaactatttaggtagtatcactttggtcccttaa 12695015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 15476287 - 15476323
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||| ||||||||    
T  15476287 ccttaactatttaggtagtatcgctttgatcccttaa 15476323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 15476624 - 15476588
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||| |||||| |||||||||||||||||||||||    
T  15476624 ccttaattatttaggtagtatcgctttggtcccttaa 15476588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 431
Target Start/End: Complemental strand, 16353519 - 16353487
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtccc 431  Q
    ||||||||||||| |||||||||||||||||||    
T  16353519 ccttaactatttaagtagtatcgctttggtccc 16353487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 436
Target Start/End: Original strand, 16669524 - 16669564
Alignment:
Q  396 gttccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||||||  | |||||||||||||||||||||    
T  16669524 gttccttaactatttaattggtatcgctttggtcccttaac 16669564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 17736612 - 17736576
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  17736612 ccttaactatttaggtagtatcgctttggtccattaa 17736576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 19204965 - 19205001
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  19204965 ccttaactatttaggtagtatcactttggtcccttaa 19205001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 21750831 - 21750867
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| ||||||||| |||||||||||||    
T  21750831 ccttaactatttaggtagtatcgttttggtcccttaa 21750867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 26289041 - 26289077
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  26289041 ccttaactatttaggtagtatcgctttcgtcccttaa 26289077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 29023958 - 29023994
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  29023958 ccttaactatttaggtagtatcgctttggttccttaa 29023994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 33762923 - 33762959
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||| |||||| |||||||||||||||||||||||    
T  33762923 ccttaattatttaggtagtatcgctttggtcccttaa 33762959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 38384889 - 38384925
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||||||||||| | ||||||||||||||||||||    
T  38384889 ccttaactatttatttggtatcgctttggtcccttaa 38384925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000006; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 33626229 - 33626192
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  33626229 ccttaactatttaggtagtatcgctttggtcccttaac 33626192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 40067713 - 40067676
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  40067713 ccttaactatttaggtagtatcgctttggtcccttaac 40067676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 46535544 - 46535581
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  46535544 ccttaactatttaggtagtatcgctttggtcccttaac 46535581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 1205399 - 1205435
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  1205399 ccttaactatttaggtagtatcgctttggtcccttaa 1205435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 21217868 - 21217904
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  21217868 ccttaactatttaggtagtatcgctttggtcccttaa 21217904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 21218212 - 21218176
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  21218212 ccttaactatttaggtagtatcgctttggtcccttaa 21218176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 29864197 - 29864233
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  29864197 ccttaactatttaggtagtatcgctttggtcccttaa 29864233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 29864540 - 29864504
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  29864540 ccttaactatttaggtagtatcgctttggtcccttaa 29864504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 33625885 - 33625921
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  33625885 ccttaactatttaggtagtatcgctttggtcccttaa 33625921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 33882314 - 33882278
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  33882314 ccttaactatttaggtagtatcgctttggtcccttaa 33882278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 34958853 - 34958889
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  34958853 ccttaactatttaggtagtatcgctttggtcccttaa 34958889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 37515818 - 37515782
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  37515818 ccttaactatttaggtagtatcgctttggtcccttaa 37515782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 52914973 - 52915009
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  52914973 ccttaactatttaggtagtatcgctttggtcccttaa 52915009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 54136112 - 54136148
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  54136112 ccttaactatttaggtagtatcgctttggtcccttaa 54136148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 435
Target Start/End: Original strand, 25058855 - 25058890
Alignment:
Q  400 cttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||||||||| |||||||||||||||||||||||    
T  25058855 cttaactatttaggtagtatcgctttggtcccttaa 25058890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 435
Target Start/End: Complemental strand, 27347965 - 27347926
Alignment:
Q  396 gttccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||||||||||||| ||||||||| |||||||||||||    
T  27347965 gttccttaactatttaggtagtatcgatttggtcccttaa 27347926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 435
Target Start/End: Original strand, 45911597 - 45911636
Alignment:
Q  396 gttccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||| ||||||||||| |||||||||||||||||||||||    
T  45911597 gttcattaactatttaggtagtatcgctttggtcccttaa 45911636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 11815881 - 11815918
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    |||||||||||||| | |||||||||||||||||||||    
T  11815881 ccttaactatttatttggtatcgctttggtcccttaac 11815918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 38866419 - 38866456
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  38866419 ccttaactatttaggtagtatcgctttggtccattaac 38866456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 435
Target Start/End: Original strand, 43316899 - 43316936
Alignment:
Q  398 tccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||||||||| | |||||||||||||||||||||||    
T  43316899 tccttaactattaaggtagtatcgctttggtcccttaa 43316936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 435
Target Start/End: Complemental strand, 43317241 - 43317208
Alignment:
Q  402 taactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||||||| |||||||||||||||||||||||    
T  43317241 taactatttaggtagtatcgctttggtcccttaa 43317208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 43969575 - 43969612
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  43969575 ccttaattatttatgtagtattgctttggtcccttaac 43969612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 44428534 - 44428571
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  44428534 ccttaactatttaggtattatcgctttggtcccttaac 44428571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 44710424 - 44710461
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  44710424 ccttaactatttaggtagtatcgctttggtctcttaac 44710461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 52915308 - 52915271
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  52915308 ccttaactatttaggtagtatcgctttggtcctttaac 52915271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 436
Target Start/End: Complemental strand, 1098436 - 1098396
Alignment:
Q  396 gttccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||||||  | |||||||||||||||||||||    
T  1098436 gttccttaactatttaattggtatcgctttggtcccttaac 1098396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 1157571 - 1157535
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  1157571 ccttaactatttaggtagtatcgctttggtcctttaa 1157535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 2738901 - 2738937
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  2738901 ccttaactatttaagtagtatcgctttggtcctttaa 2738937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 9010870 - 9010834
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  9010870 ccttaactatttaggtagtatctctttggtcccttaa 9010834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 10014486 - 10014522
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  10014486 ccttaactatttaggtagtattgctttggtcccttaa 10014522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 10021627 - 10021663
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  10021627 ccttaactatttaggtagtattgctttggtcccttaa 10021663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 25218105 - 25218141
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  25218105 ccttaactatttaggtaatatcgctttggtcccttaa 25218141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 48209969 - 48210005
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  48209969 ccttaactatttaggtagtatcactttggtcccttaa 48210005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 53645472 - 53645508
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||||||||||  ||||||||||||||||||||||    
T  53645472 ccttaactatttagatagtatcgctttggtcccttaa 53645508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000006; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 398 - 435
Target Start/End: Complemental strand, 26332689 - 26332652
Alignment:
Q  398 tccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||||||||||| |||||||||||||||||||||||    
T  26332689 tccttaactatttaggtagtatcgctttggtcccttaa 26332652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 396 - 436
Target Start/End: Complemental strand, 967519 - 967479
Alignment:
Q  396 gttccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||||||  |||||||||||||||||||||||    
T  967519 gttccttaactatttaattagtatcgctttggtcccttaac 967479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 12123444 - 12123408
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  12123444 ccttaactatttaggtagtatcgctttggtcccttaa 12123408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 28688355 - 28688319
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  28688355 ccttaactatttaggtagtatcgctttggtcccttaa 28688319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 34521622 - 34521586
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  34521622 ccttaactatttaggtagtatcgctttggtcccttaa 34521586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 40410733 - 40410769
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  40410733 ccttaactatttaggtagtatcgctttggtcccttaa 40410769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 41208422 - 41208458
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  41208422 ccttaactatttaagtagtatcgctttggtcccttaa 41208458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 41208765 - 41208729
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  41208765 ccttaactatttaggtagtatcgctttggtcccttaa 41208729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 45871718 - 45871754
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  45871718 ccttaactatttaggtagtatcgctttggtcccttaa 45871754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 52606149 - 52606185
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||||||||||||| |||||||||||||    
T  52606149 ccttaactatttatgtagtatcgttttggtcccttaa 52606185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 54107690 - 54107726
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  54107690 ccttaactatttaggtagtatcgctttggtcccttaa 54107726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 435
Target Start/End: Original strand, 7937665 - 7937700
Alignment:
Q  400 cttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||||||||| |||||||||||||||||||||||    
T  7937665 cttaactatttaggtagtatcgctttggtcccttaa 7937700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 8846441 - 8846404
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  8846441 ccttaactatttaggtagtatcgctttggtcacttaac 8846404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 10756739 - 10756776
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  10756739 ccttagctatttaggtagtatcgctttggtcccttaac 10756776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 435
Target Start/End: Complemental strand, 19124538 - 19124501
Alignment:
Q  398 tccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  19124538 tccttaactatttaggtagtatcgttttggtcccttaa 19124501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 435
Target Start/End: Original strand, 26332343 - 26332376
Alignment:
Q  402 taactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||||||| |||||||||||||||||||||||    
T  26332343 taactatttaggtagtatcgctttggtcccttaa 26332376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 43527044 - 43527081
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  43527044 ccttaactatttaggtagtatcgatttggtcccttaac 43527081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 44069144 - 44069181
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  44069144 ccttaactatttaggtagtatcgttttggtcccttaac 44069181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 54831876 - 54831913
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    |||||||||||||| | |||||||||||||||||||||    
T  54831876 ccttaactatttatttggtatcgctttggtcccttaac 54831913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 4846961 - 4846925
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||| ||||||||    
T  4846961 ccttaactatttaggtagtatcgctttgatcccttaa 4846925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 7743130 - 7743094
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||| ||||||||    
T  7743130 ccttaactatttaggtagtatcgctttgatcccttaa 7743094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 14353067 - 14353103
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||| |||||| |||||||||||||||||||||||    
T  14353067 ccttaattatttaggtagtatcgctttggtcccttaa 14353103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 14353412 - 14353376
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  14353412 ccttaactatttaggtagtatcgcattggtcccttaa 14353376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 27940293 - 27940329
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  27940293 ccttaactatttaggtagtatcactttggtcccttaa 27940329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 31514227 - 31514191
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  31514227 ccttaactatttaggtagtatcgctttggtcctttaa 31514191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 34521287 - 34521323
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||| |||||| |||||||||||||||||||||||    
T  34521287 ccttaattatttaggtagtatcgctttggtcccttaa 34521323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 34630003 - 34630039
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| ||||||||| |||||||||||||    
T  34630003 ccttaactatttaagtagtatcgttttggtcccttaa 34630039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 35580314 - 35580278
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| ||||||||| |||||||||||||    
T  35580314 ccttaactatttaggtagtatcgatttggtcccttaa 35580278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 35753796 - 35753760
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  35753796 ccttaactatttaggtagtatcgctttggtccattaa 35753760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 40969276 - 40969312
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||||||||||  ||||||||||||||||||||||    
T  40969276 ccttaactatttaattagtatcgctttggtcccttaa 40969312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 41997840 - 41997876
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| ||||||||| |||||||||||||    
T  41997840 ccttaactatttaggtagtatcgttttggtcccttaa 41997876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 41998179 - 41998143
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  41998179 ccttaactatttaggtagtatcactttggtcccttaa 41998143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 45171432 - 45171396
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  45171432 ccttaactatttaggtagtatcgctttggtccattaa 45171396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 45872054 - 45872018
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| ||||||||| |||||||||||||    
T  45872054 ccttaactatttaggtagtatcgttttggtcccttaa 45872018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 51883880 - 51883916
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||||||||||  ||||||||||||||||||||||    
T  51883880 ccttaactatttaattagtatcgctttggtcccttaa 51883916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 52609727 - 52609691
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  52609727 ccttaactatttaggtactatcgctttggtcccttaa 52609691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 53678798 - 53678762
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||||||||||  ||||||||||||||||||||||    
T  53678798 ccttaactatttaattagtatcgctttggtcccttaa 53678762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 54081649 - 54081613
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  54081649 ccttaactatttaggtagtattgctttggtcccttaa 54081613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000006; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 16260892 - 16260929
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  16260892 ccttaactatttaggtagtatcgctttggtcccttaac 16260929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 16261235 - 16261198
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  16261235 ccttaactatttaggtagtatcgctttggtcccttaac 16261198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 34127929 - 34127892
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  34127929 ccttaactatttaagtagtatcgctttggtcccttaac 34127892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 398 - 435
Target Start/End: Original strand, 41377374 - 41377411
Alignment:
Q  398 tccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||||||||||| |||||||||||||||||||||||    
T  41377374 tccttaactatttaggtagtatcgctttggtcccttaa 41377411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 4104180 - 4104216
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  4104180 ccttaactatttaggtagtatcgctttggtcccttaa 4104216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 4120785 - 4120821
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  4120785 ccttaactatttaggtagtatcgctttggtcccttaa 4120821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 13354198 - 13354234
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  13354198 ccttaactatttaggtagtatcgctttggtcccttaa 13354234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 16736122 - 16736158
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  16736122 ccttaactatttaggtagtatcgctttggtcccttaa 16736158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 25642633 - 25642597
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  25642633 ccttaactatttaggtagtatcgctttggtcccttaa 25642597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 27132532 - 27132568
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  27132532 ccttaactatttaggtagtatcgctttggtcccttaa 27132568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 38275498 - 38275534
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||||||||||| |||||||||||||||    
T  38275498 ccttaactatttatgtagtattgctttggtcccttaa 38275534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 39912648 - 39912684
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  39912648 ccttaactatttaggtagtatcgctttggtcccttaa 39912684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 43183604 - 43183640
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  43183604 ccttaactatttaggtagtatcgctttggtcccttaa 43183640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 435
Target Start/End: Complemental strand, 1580209 - 1580170
Alignment:
Q  396 gttccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||||||  ||||||||||||||||||||||    
T  1580209 gttccttaactatttaaatagtatcgctttggtcccttaa 1580170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 3603525 - 3603559
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtccctt 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  3603525 ccttaactatttatttagtatcgctttggtccctt 3603559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 435
Target Start/End: Complemental strand, 37744755 - 37744717
Alignment:
Q  397 ttccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  37744755 ttccttaactatttagatagtatcgctttggtcccttaa 37744717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 344
Target Start/End: Original strand, 21419102 - 21419147
Alignment:
Q  300 ctcatctttcttatatc-ttgaaatttcttaaaattttgaatatat 344  Q
    ||||||||||||||||| ||||||||||||| |||||| |||||||    
T  21419102 ctcatctttcttatatccttgaaatttcttataattttaaatatat 21419147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 31450687 - 31450724
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  31450687 ccttaactatttaggtagtatcgctttggtcctttaac 31450724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 31451031 - 31450994
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  31451031 ccttaactatttaggtagtatcgatttggtcccttaac 31450994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 34820644 - 34820607
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  34820644 ccttaactatttaggtagtctcgctttggtcccttaac 34820607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 4104524 - 4104488
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||| ||||||||    
T  4104524 ccttaactatttaggtagtatcgctttgatcccttaa 4104488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 5921751 - 5921715
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||||||||||| |||||||||||||||| |||||    
T  5921751 ccttaactatttatatagtatcgctttggtctcttaa 5921715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 12303806 - 12303842
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  12303806 ccttaactatttaggtagtatcgctttggtcacttaa 12303842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 13354542 - 13354506
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||| ||||||||    
T  13354542 ccttaactatttaggtagtatcgctttgatcccttaa 13354506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 17856220 - 17856256
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||| |||||| |||||||||||||||||||||||    
T  17856220 ccttaattatttaggtagtatcgctttggtcccttaa 17856256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 18565368 - 18565332
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  18565368 ccttaactatttaggtagtatcgcttgggtcccttaa 18565332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 436
Target Start/End: Original strand, 18950758 - 18950794
Alignment:
Q  400 cttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||| | |||||||||||||||||||||    
T  18950758 cttaactatttatttggtatcgctttggtcccttaac 18950794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 25642289 - 25642325
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  25642289 ccttaactatttaagtagtatcgctttggttccttaa 25642325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 27883489 - 27883525
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  27883489 ccttaactatttaagtaatatcgctttggtcccttaa 27883525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 28202881 - 28202917
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  28202881 ccttaactatttaggtaatatcgctttggtcccttaa 28202917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 28203225 - 28203189
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| || ||||||||||||||||||||    
T  28203225 ccttaactatttaggtcgtatcgctttggtcccttaa 28203189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 28631295 - 28631331
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||| ||||||||||||||||||    
T  28631295 ccttaactatttaggtagcatcgctttggtcccttaa 28631331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 34820300 - 34820336
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  34820300 ccttaactatttaagtagtatcgctttggttccttaa 34820336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 344
Target Start/End: Complemental strand, 35370721 - 35370677
Alignment:
Q  300 ctcatctttcttatatcttgaaatttcttaaaattttgaatatat 344  Q
    ||||||||||||||||| |  ||||||||| ||||||||||||||    
T  35370721 ctcatctttcttatatccttgaatttcttataattttgaatatat 35370677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 37412943 - 37412907
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  37412943 ccttaactatttaagtagtatcgcattggtcccttaa 37412907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 37744470 - 37744506
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  37744470 ccttaactatttaggtagtatcactttggtcccttaa 37744506  T

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Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 39454472 - 39454508
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  39454472 ccttaactatttaagtagtatcactttggtcccttaa 39454508  T

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Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 41659766 - 41659802
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||||||||||  ||||||||||||||||||||||    
T  41659766 ccttaactatttaattagtatcgctttggtcccttaa 41659802  T

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Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 43183948 - 43183912
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||| |||||| |||||||||||||||||||||||    
T  43183948 ccttaattatttaggtagtatcgctttggtcccttaa 43183912  T

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Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 436
Target Start/End: Complemental strand, 43820368 - 43820328
Alignment:
Q  396 gttccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||||||  | |||||||||||||||||||||    
T  43820368 gttccttaactatttaattggtatcgctttggtcccttaac 43820328  T

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Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 44915761 - 44915797
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||||||||||  ||||||||||||||||||||||    
T  44915761 ccttaactatttaattagtatcgctttggtcccttaa 44915797  T

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Target: scaffold0809 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 4683 - 4647
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  4683 ccttaactatttaggtagtatcgctttggtcccttaa 4647  T

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Target: scaffold0236 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 11579 - 11543
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||||||||    
T  11579 ccttaactatttaggtagtatcgctttggtcccttaa 11543  T

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Target: scaffold0444 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 11660 - 11697
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaac 436  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  11660 ccttaactatttaggtattatcgctttggtcccttaac 11697  T

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Target: scaffold0188 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 435
Target Start/End: Complemental strand, 13903 - 13870
Alignment:
Q  402 taactatttatgtagtatcgctttggtcccttaa 435  Q
    |||||||||| |||||||||||||||||||||||    
T  13903 taactatttaggtagtatcgctttggtcccttaa 13870  T

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Target: scaffold0168 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 11852 - 11816
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  11852 ccttaactatttaggtagtatcgctttggtcctttaa 11816  T

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Target: scaffold0051 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 40717 - 40681
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  40717 ccttaactatttaggtagtattgctttggtcccttaa 40681  T

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Target: scaffold0016 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 90826 - 90862
Alignment:
Q  399 ccttaactatttatgtagtatcgctttggtcccttaa 435  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  90826 ccttaactatttaggtagtatcgcttttgtcccttaa 90862  T

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