View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6015_low_20 (Length: 248)

Name: NF6015_low_20
Description: NF6015
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6015_low_20
NF6015_low_20
[»] chr8 (34 HSPs)
chr8 (26-244)||(7977865-7978083)
chr8 (50-119)||(14961660-14961729)
chr8 (50-119)||(28014855-28014924)
chr8 (50-108)||(31812236-31812294)
chr8 (53-119)||(38212944-38213010)
chr8 (50-119)||(3306052-3306121)
chr8 (50-119)||(9580106-9580175)
chr8 (50-119)||(27874678-27874747)
chr8 (53-119)||(9825065-9825131)
chr8 (50-108)||(26834684-26834742)
chr8 (51-125)||(29642709-29642783)
chr8 (50-127)||(9801772-9801849)
chr8 (50-107)||(10129227-10129284)
chr8 (50-119)||(12132095-12132164)
chr8 (44-108)||(1203724-1203788)
chr8 (51-119)||(2161499-2161567)
chr8 (51-119)||(15198898-15198966)
chr8 (49-113)||(45006088-45006151)
chr8 (54-125)||(13327942-13328013)
chr8 (49-96)||(18567412-18567459)
chr8 (48-119)||(19343831-19343902)
chr8 (60-119)||(36967077-36967136)
chr8 (53-116)||(40225987-40226050)
chr8 (48-118)||(16445731-16445801)
chr8 (54-116)||(32186301-32186363)
chr8 (50-103)||(6818145-6818198)
chr8 (50-107)||(7140456-7140513)
chr8 (42-119)||(12189577-12189654)
chr8 (42-119)||(12434005-12434082)
chr8 (53-98)||(13496709-13496754)
chr8 (53-98)||(22838358-22838403)
chr8 (50-119)||(26363987-26364056)
chr8 (52-125)||(39701802-39701875)
chr8 (50-86)||(26682213-26682249)
[»] chr4 (32 HSPs)
chr4 (50-119)||(27019372-27019441)
chr4 (50-119)||(18882264-18882333)
chr4 (50-119)||(19468306-19468375)
chr4 (49-108)||(27362514-27362573)
chr4 (54-116)||(55813979-55814041)
chr4 (50-119)||(50352414-50352483)
chr4 (51-119)||(19450898-19450966)
chr4 (39-98)||(3085803-3085862)
chr4 (51-125)||(4329700-4329774)
chr4 (50-120)||(40049669-40049739)
chr4 (50-112)||(44916640-44916702)
chr4 (54-107)||(16667385-16667438)
chr4 (53-122)||(47326892-47326961)
chr4 (53-122)||(47341688-47341757)
chr4 (54-119)||(52391410-52391475)
chr4 (50-103)||(54495634-54495687)
chr4 (51-119)||(17409936-17410004)
chr4 (47-119)||(23438267-23438339)
chr4 (53-113)||(23545594-23545654)
chr4 (51-119)||(33632201-33632268)
chr4 (51-119)||(34941390-34941458)
chr4 (57-112)||(38222405-38222461)
chr4 (51-119)||(49181184-49181252)
chr4 (53-116)||(4779436-4779499)
chr4 (56-119)||(24684949-24685012)
chr4 (54-96)||(23553705-23553747)
chr4 (52-125)||(29190815-29190888)
chr4 (51-96)||(35999945-35999990)
chr4 (50-119)||(39876942-39877011)
chr4 (83-119)||(41970495-41970531)
chr4 (53-97)||(46803933-46803977)
chr4 (53-125)||(53961428-53961500)
[»] chr1 (26 HSPs)
chr1 (49-113)||(39310782-39310846)
chr1 (51-109)||(34802089-34802147)
chr1 (42-119)||(6180298-6180375)
chr1 (52-113)||(13321994-13322055)
chr1 (50-119)||(23576411-23576480)
chr1 (50-119)||(35512837-35512906)
chr1 (51-119)||(38812852-38812920)
chr1 (53-119)||(5057114-5057180)
chr1 (49-119)||(25465270-25465340)
chr1 (50-108)||(30172002-30172060)
chr1 (50-108)||(30187543-30187601)
chr1 (50-119)||(3168065-3168134)
chr1 (51-119)||(36490891-36490959)
chr1 (48-107)||(5875210-5875269)
chr1 (45-96)||(6569977-6570028)
chr1 (45-80)||(9872970-9873005)
chr1 (53-112)||(25532328-25532387)
chr1 (51-113)||(1502718-1502780)
chr1 (47-89)||(26767465-26767507)
chr1 (51-96)||(313884-313929)
chr1 (50-119)||(22167447-22167516)
chr1 (54-103)||(35438843-35438892)
chr1 (55-116)||(39781456-39781517)
chr1 (54-119)||(41676561-41676626)
chr1 (53-113)||(1366165-1366225)
chr1 (50-98)||(51382447-51382495)
[»] chr7 (23 HSPs)
chr7 (48-119)||(4969885-4969956)
chr7 (53-119)||(25709399-25709465)
chr7 (55-119)||(26037205-26037269)
chr7 (51-119)||(33343100-33343168)
chr7 (54-109)||(7899487-7899542)
chr7 (50-125)||(9332067-9332142)
chr7 (54-120)||(26050462-26050528)
chr7 (54-120)||(26059821-26059887)
chr7 (53-119)||(26300683-26300749)
chr7 (53-119)||(29398134-29398200)
chr7 (53-119)||(45501571-45501637)
chr7 (52-121)||(8091311-8091380)
chr7 (50-119)||(46290122-46290191)
chr7 (51-119)||(34270373-34270441)
chr7 (51-103)||(39757108-39757160)
chr7 (51-98)||(820539-820586)
chr7 (54-96)||(5833490-5833532)
chr7 (36-98)||(24462938-24463000)
chr7 (53-119)||(29692540-29692606)
chr7 (42-96)||(42750418-42750472)
chr7 (51-89)||(47457459-47457497)
chr7 (51-96)||(3561876-3561921)
chr7 (50-119)||(32117926-32117995)
[»] chr5 (17 HSPs)
chr5 (50-119)||(3398332-3398401)
chr5 (55-116)||(31567493-31567554)
chr5 (53-116)||(40980488-40980551)
chr5 (49-119)||(6863668-6863738)
chr5 (47-116)||(18841699-18841768)
chr5 (53-119)||(23995416-23995482)
chr5 (53-119)||(32019984-32020050)
chr5 (50-119)||(30839893-30839962)
chr5 (50-119)||(36597691-36597760)
chr5 (48-119)||(11636843-11636914)
chr5 (53-116)||(15240950-15241013)
chr5 (52-103)||(35151347-35151398)
chr5 (51-125)||(2795629-2795703)
chr5 (50-96)||(4047547-4047593)
chr5 (61-119)||(36474637-36474695)
chr5 (55-108)||(30893752-30893805)
chr5 (54-103)||(34578139-34578188)
[»] chr3 (20 HSPs)
chr3 (43-108)||(38389570-38389635)
chr3 (52-119)||(2566594-2566661)
chr3 (50-113)||(50204521-50204584)
chr3 (50-108)||(23523069-23523127)
chr3 (46-119)||(51401552-51401625)
chr3 (49-119)||(51618159-51618229)
chr3 (50-119)||(2571380-2571449)
chr3 (54-119)||(8165758-8165823)
chr3 (50-119)||(10307878-10307947)
chr3 (50-119)||(45983618-45983687)
chr3 (55-98)||(9247869-9247912)
chr3 (56-119)||(23803049-23803112)
chr3 (53-116)||(33474473-33474536)
chr3 (53-112)||(40930170-40930229)
chr3 (54-119)||(51567821-51567883)
chr3 (50-108)||(12515471-12515529)
chr3 (49-119)||(42180164-42180234)
chr3 (51-96)||(3863464-3863509)
chr3 (54-119)||(8497421-8497486)
chr3 (52-108)||(36426408-36426464)
[»] chr6 (23 HSPs)
chr6 (51-119)||(34692466-34692534)
chr6 (52-125)||(31568215-31568288)
chr6 (49-108)||(6016979-6017038)
chr6 (53-108)||(10887152-10887207)
chr6 (52-111)||(29065424-29065483)
chr6 (52-111)||(29120277-29120336)
chr6 (48-98)||(3261211-3261261)
chr6 (49-119)||(28943765-28943835)
chr6 (53-111)||(29074438-29074496)
chr6 (53-111)||(29079202-29079260)
chr6 (53-111)||(29107011-29107069)
chr6 (53-119)||(30591163-30591229)
chr6 (50-119)||(17552584-17552653)
chr6 (47-103)||(12454193-12454249)
chr6 (51-119)||(14228124-14228192)
chr6 (48-108)||(33017847-33017907)
chr6 (52-103)||(29863301-29863352)
chr6 (53-115)||(4371955-4372017)
chr6 (53-119)||(27819627-27819693)
chr6 (51-108)||(18332686-18332743)
chr6 (54-119)||(31790917-31790982)
chr6 (43-98)||(2830670-2830726)
chr6 (50-98)||(13391808-13391856)
[»] chr2 (22 HSPs)
chr2 (51-119)||(43806472-43806540)
chr2 (50-119)||(4576323-4576392)
chr2 (55-116)||(26003348-26003409)
chr2 (51-119)||(9747429-9747497)
chr2 (43-119)||(15411612-15411688)
chr2 (50-113)||(8065241-8065304)
chr2 (50-107)||(38248417-38248474)
chr2 (53-113)||(7720233-7720293)
chr2 (53-116)||(5853463-5853526)
chr2 (49-96)||(6109524-6109571)
chr2 (54-125)||(8770887-8770958)
chr2 (53-116)||(9895127-9895190)
chr2 (50-125)||(16126556-16126631)
chr2 (53-116)||(16493532-16493595)
chr2 (50-113)||(24729574-24729637)
chr2 (49-119)||(7757782-7757852)
chr2 (50-119)||(5583555-5583624)
chr2 (50-107)||(12016790-12016847)
chr2 (50-119)||(25997999-25998068)
chr2 (50-119)||(29157826-29157895)
chr2 (50-119)||(43388478-43388547)
chr2 (49-85)||(25295849-25295885)
[»] scaffold0111 (2 HSPs)
scaffold0111 (53-119)||(41094-41160)
scaffold0111 (50-96)||(37111-37157)
[»] scaffold0128 (1 HSPs)
scaffold0128 (52-119)||(44293-44360)
[»] scaffold0011 (1 HSPs)
scaffold0011 (52-103)||(13213-13264)
[»] scaffold0727 (1 HSPs)
scaffold0727 (54-96)||(5826-5868)
[»] scaffold0061 (1 HSPs)
scaffold0061 (51-125)||(52777-52851)
[»] scaffold0017 (1 HSPs)
scaffold0017 (51-125)||(145783-145857)
[»] scaffold0229 (1 HSPs)
scaffold0229 (53-113)||(24527-24587)


Alignment Details
Target: chr8 (Bit Score: 199; Significance: 1e-108; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 26 - 244
Target Start/End: Complemental strand, 7978083 - 7977865
Alignment:
Q  26 aactcgttttatattgatttatttagggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaacttttgttt 125  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7978083 aactcgttttatgttgatttatttagggtttttctatcatatgcaaatttgcaaatgttaaaaagtttaaaatggtaattttgtattgaaacttttgttt 7977984  T
Q  126 gtgtacaaatcagttttagacacacttaattgattgtgtcctcttgttttcattgtatctattattgccacaaatactgtagaatgtactaacctctata 225  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7977983 gtgtacaaatcagttgtagacacacttaaatgattgtgtcctcttgttttcattgtatctattattgccacaaatactgtagaatgtactaacctctata 7977884  T
Q  226 tgttattatccctttgctt 244  Q
    |||||||||||||||||||    
T  7977883 tgttattatccctttgctt 7977865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 14961660 - 14961729
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||||||||| |||||||||||| ||| ||| ||| ||||||| |||||||||||||| |||||    
T  14961660 agggtttttctatcatgtgcaaatttgcacatgctaagaagtttaaaatagtaattttgtattggaactt 14961729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 28014855 - 28014924
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||||||||| |||||||||||| ||||||| ||| ||||||| | |||||||||||| |||||    
T  28014855 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaactt 28014924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 31812294 - 31812236
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttg 108  Q
    |||||||||||||||| |||||||||||| || |||| ||| |||||||||||||||||    
T  31812294 agggtttttctatcatgtgcaaatttgcacatattaagaagtttaaaatggtaattttg 31812236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 38212944 - 38213010
Alignment:
Q  53 gtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||||||||||| |||||||||||| ||||||| ||| ||||||| | |||||| |||||||||||    
T  38212944 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttatattgaaactt 38213010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 3306052 - 3306121
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||||||||| |||||||||||| ||||||| ||  ||||||| |||| |||| ||||||||||    
T  3306052 agggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattgaaactt 3306121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 9580106 - 9580175
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||||||| |||||| ||||||||| || ||||||| ||| ||||||| | ||||||||||||||||||    
T  9580106 agggtttttttatcatgtgcaaatttacacatgttaagaagtttaaaatagaaattttgtattgaaactt 9580175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 27874678 - 27874747
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||||||||| |||||||||||| ||||||| ||| |||||||   |||||||||||| |||||    
T  27874678 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatacaaattttgtattggaactt 27874747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 9825131 - 9825065
Alignment:
Q  53 gtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||||||||||| || |||| |||| |||||||||| ||||||||||||  ||||| |||||||||    
T  9825131 gtttttctatcatgtgtaaatatgcacatgttaaaaaaattaaaatggtaggtttgtcttgaaactt 9825065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 26834742 - 26834684
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttg 108  Q
    |||||||||||||||| |||||||||||| || |||| ||  |||||||||||||||||    
T  26834742 agggtttttctatcatgtgcaaatttgcatatattaagaaatttaaaatggtaattttg 26834684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 29642783 - 29642709
Alignment:
Q  51 gggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaacttttgttt 125  Q
    ||||||||||||||| |||||||||||| ||| |||  |  |||||||||||| ||||| ||||||||| |||||    
T  29642783 gggtttttctatcatgtgcaaatttgcatatgataaggaatttaaaatggtaagtttgtcttgaaacttgtgttt 29642709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 9801849 - 9801772
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaacttttgtttgt 127  Q
    |||||||||| ||||| |||||||||||| ||||||| ||| ||||| | |||| ||||  ||||||||| |||||||    
T  9801849 agggtttttcaatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttgaaacttatgtttgt 9801772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 107
Target Start/End: Complemental strand, 10129284 - 10129227
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaatttt 107  Q
    |||||||||||||||| |||||||||||| ||||||| ||| ||||| | ||||||||    
T  10129284 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaatttt 10129227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 12132164 - 12132095
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||||||||||||||||||||| ||||| ||||||| ||  ||||| | |||| ||||||||| |||||    
T  12132164 agggtttttctatcatctgcaaacttgcacatgttaagaaatttaaagtagtaagtttgtattggaactt 12132095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 1203788 - 1203724
Alignment:
Q  44 ttatttagggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttg 108  Q
    |||| ||||||||||||||||| |||||||||||| ||| ||| ||| ||||| | |||||||||    
T  1203788 ttatatagggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaattttg 1203724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 2161567 - 2161499
Alignment:
Q  51 gggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||||||||||||| |||||||||||| ||||||| ||  ||||||| |||| |||| |||| |||||    
T  2161567 gggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaactt 2161499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 15198898 - 15198966
Alignment:
Q  51 gggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||||||||||||| |||||||||||| ||||||||||  || |||| |||| |||| |||| |||||    
T  15198898 gggtttttctatcatgtgcaaatttgcacatgttaaaaaattttaaatagtaactttgcattgtaactt 15198966  T

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Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 45006151 - 45006088
Alignment:
Q  49 tagggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattg 113  Q
    |||||||||||||||||  ||||||||||| ||||||| ||| ||||||| | ||||||||||||    
T  45006151 tagggtttttctatcataagcaaatttgcacatgttaagaagtttaaaatag-aattttgtattg 45006088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 13327942 - 13328013
Alignment:
Q  54 tttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaacttttgttt 125  Q
    |||||||||||| |||||||||||| ||||||| ||| ||||| | |||| ||||  ||||||||| |||||    
T  13327942 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttgaaacttgtgttt 13328013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 96
Target Start/End: Original strand, 18567412 - 18567459
Alignment:
Q  49 tagggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaa 96  Q
    ||||||||||||||||| |||||||||||| ||||||| ||| |||||    
T  18567412 tagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 18567459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 119
Target Start/End: Original strand, 19343831 - 19343902
Alignment:
Q  48 ttagggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||||||||| |||||| |||||||||||| ||||||| | | ||||| | |||||||||  |||||||||    
T  19343831 ttagggtttttttatcatgtgcaaatttgcacatgttaacacgtttaaagtagtaattttgacttgaaactt 19343902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 119
Target Start/End: Original strand, 36967077 - 36967136
Alignment:
Q  60 tatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||| |||||||||||| ||||||| ||| ||||||| | || |||||||||||||||    
T  36967077 tatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaactttgtattgaaactt 36967136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 116
Target Start/End: Original strand, 40225987 - 40226050
Alignment:
Q  53 gtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaa 116  Q
    ||||||||||||| |||||||||||| ||||||| ||| ||| ||| | ||||||| |||||||    
T  40225987 gtttttctatcatgtgcaaatttgcacatgttaagaagtttataattgaaattttgcattgaaa 40226050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 118
Target Start/End: Original strand, 16445731 - 16445801
Alignment:
Q  48 ttagggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaact 118  Q
    |||| |||||||||| || |||||||||||| || |||| ||| ||||||| | |||||||||||| ||||    
T  16445731 ttagagtttttctattatgtgcaaatttgcacatattaagaagtttaaaatagaaattttgtattggaact 16445801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 32186363 - 32186301
Alignment:
Q  54 tttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaa 116  Q
    |||||||||| | |||||||||||| ||||||| ||| ||||||| | |||||| ||||||||    
T  32186363 tttttctatcgtgtgcaaatttgcatatgttaataagtttaaaatagaaattttatattgaaa 32186301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 6818198 - 6818145
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaa 103  Q
    |||||||||||||||| |||||||||| | ||||||| ||| ||||||| ||||    
T  6818198 agggtttttctatcatgtgcaaatttgtacatgttaagaagtttaaaatagtaa 6818145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 107
Target Start/End: Original strand, 7140456 - 7140513
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaatttt 107  Q
    |||||||||||||||| |||||||||||| || |||| ||| ||||| | ||||||||    
T  7140456 agggtttttctatcatgtgcaaatttgcacatattaagaagtttaaagtagtaatttt 7140513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 12189577 - 12189654
Alignment:
Q  42 atttatttagggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||| ||| |||||||||||||| |||||||||||| ||| ||| ||| ||||||| | || ||| ||||| |||||    
T  12189577 atttaattaaggtttttctatcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttatattggaactt 12189654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 12434005 - 12434082
Alignment:
Q  42 atttatttagggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||| ||| |||||||||||||| |||||||||||| ||| ||| ||| ||||||| | || ||| ||||| |||||    
T  12434005 atttaattaaggtttttctatcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttatattggaactt 12434082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 13496709 - 13496754
Alignment:
Q  53 gtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaat 98  Q
    ||||||||||||| |||||||||||| ||||||| ||| |||||||    
T  13496709 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaat 13496754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 22838403 - 22838358
Alignment:
Q  53 gtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaat 98  Q
    ||||||||||||| |||||||||||| ||||||| ||| |||||||    
T  22838403 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaat 22838358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 26363987 - 26364056
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||||||||| |||||||||||  ||||||| ||  ||||||| |||| |||| |||| |||||    
T  26363987 agggtttttctatcatgtgcaaatttgcgcatgttaagaaatttaaaatagtaactttgcattggaactt 26364056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 39701802 - 39701875
Alignment:
Q  52 ggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaacttttgttt 125  Q
    |||||||||||||| |||||||||||| ||||||| ||| ||||| | |||| ||||  |||||| || |||||    
T  39701802 ggtttttctatcatgtgcaaatttgcacatgttaacaagtttaaagtagtaactttgacttgaaatttgtgttt 39701875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 26682249 - 26682213
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaa 86  Q
    |||||||||||||||| |||||||||||| |||||||    
T  26682249 agggtttttctatcatgtgcaaatttgcacatgttaa 26682213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 1e-19; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 27019441 - 27019372
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||||||||| |||||||||||| ||||||||||| ||||||| | ||||||||||||||||||    
T  27019441 agggtttttctatcatgtgcaaatttgcatatgttaaaaagtttaaaatagaaattttgtattgaaactt 27019372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 18882264 - 18882333
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||||||||| |||||||||||| ||||||| ||| ||||||| | |||||||||||| |||||    
T  18882264 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaactt 18882333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 19468375 - 19468306
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||||||||||| || |||||||||||| ||||||| ||| ||||||| | ||||||||||||||||||    
T  19468375 agggtttttctattatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattgaaactt 19468306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 49 - 108
Target Start/End: Complemental strand, 27362573 - 27362514
Alignment:
Q  49 tagggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttg 108  Q
    ||||||||||||||||| |||||||||||| ||||||| ||| ||||| |||||||||||    
T  27362573 tagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttg 27362514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 55814041 - 55813979
Alignment:
Q  54 tttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaa 116  Q
    ||||| |||||| |||||||||||| ||||||||||| |||||||  ||||||||||||||||    
T  55814041 tttttgtatcatatgcaaatttgcacatgttaaaaagtttaaaataataattttgtattgaaa 55813979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 50352483 - 50352414
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||||||||| |||||||||||| ||||||| ||  ||||||| ||||||||| |||| |||||    
T  50352483 agggtttttctatcatatgcaaatttgcacatgttaagaaatttaaaatagtaattttgcattggaactt 50352414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 19450898 - 19450966
Alignment:
Q  51 gggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||||| || |||||||||||| ||||||| ||| ||||||| | |||||||||||| |||||    
T  19450898 gggtttttctattatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaactt 19450966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 98
Target Start/End: Complemental strand, 3085862 - 3085803
Alignment:
Q  39 ttgatttatttagggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaat 98  Q
    |||||||| |||||||||||||||||| |||||||||||| || |||| ||| |||||||    
T  3085862 ttgatttagttagggtttttctatcatgtgcaaatttgcacattttaagaagtttaaaat 3085803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 4329774 - 4329700
Alignment:
Q  51 gggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaacttttgttt 125  Q
    ||||||||||||||| |||||||||||| ||||||||||| ||||| | |||| ||||  |||||| || |||||    
T  4329774 gggtttttctatcatgtgcaaatttgcatatgttaaaaagtttaaagtagtaactttgacttgaaatttatgttt 4329700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 120
Target Start/End: Complemental strand, 40049739 - 40049669
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaacttt 120  Q
    ||||||||||||| || |||||||||||| ||||||| ||  ||||||| ||||||||| |||| ||||||    
T  40049739 agggtttttctattatgtgcaaatttgcacatgttaagaaatttaaaatagtaattttgcattggaacttt 40049669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 44916640 - 44916702
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtatt 112  Q
    |||||||||||||||| |||||||||||| || |||||||  ||||||| | |||||||||||    
T  44916640 agggtttttctatcatgtgcaaatttgcacatattaaaaaatttaaaatagaaattttgtatt 44916702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 107
Target Start/End: Original strand, 16667385 - 16667438
Alignment:
Q  54 tttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaatttt 107  Q
    |||||||||||| |||||||||||| ||||||| ||| |||||||| |||||||    
T  16667385 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatgataatttt 16667438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 122
Target Start/End: Original strand, 47326892 - 47326961
Alignment:
Q  53 gtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaacttttg 122  Q
    ||||||||||||| |||||||||||| ||||||| ||| ||||| |||||| ||||  ||| ||||||||    
T  47326892 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttttg 47326961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 122
Target Start/End: Original strand, 47341688 - 47341757
Alignment:
Q  53 gtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaacttttg 122  Q
    ||||||||||||| |||||||||||| ||||||| ||| ||||| |||||| ||||  ||| ||||||||    
T  47341688 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttttg 47341757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 119
Target Start/End: Complemental strand, 52391475 - 52391410
Alignment:
Q  54 tttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||||| || ||||||||| ||||||| ||| ||||||| | |||||||||||| |||||    
T  52391475 tttttctatcatgtgtaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaactt 52391410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 54495634 - 54495687
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaa 103  Q
    |||||||||||||||| |||||||||||| ||||||| ||| ||||| ||||||    
T  54495634 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaa 54495687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 17410004 - 17409936
Alignment:
Q  51 gggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||||||||||||| |||||||||||| ||| ||| ||| ||||||| | || ||||||||| |||||    
T  17410004 gggtttttctatcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttgtattggaactt 17409936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 119
Target Start/End: Complemental strand, 23438339 - 23438267
Alignment:
Q  47 tttagggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||||||||| || |||||||||||| ||||| | ||  ||||||| |||| ||||| |||||||||    
T  23438339 tttagggtttttctattatgtgcaaatttgcacatgttgagaattttaaaatagtaactttgttttgaaactt 23438267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 23545654 - 23545594
Alignment:
Q  53 gtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattg 113  Q
    ||||||||||||| |||||||||||| ||||||| ||| |||||||   ||||||||||||    
T  23545654 gtttttctatcatgtgcaaatttgcacatgttaataagtttaaaatataaattttgtattg 23545594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 33632201 - 33632268
Alignment:
Q  51 gggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||||||||||||| ||| |||||||| ||||||||||| ||||||| | || ||| |||||||||||    
T  33632201 gggtttttctatcatgtgcgaatttgcacatgttaaaaagtttaaaatag-aaatttatattgaaactt 33632268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 34941458 - 34941390
Alignment:
Q  51 gggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||||||||||||| ||| |||||||| ||| ||| ||| ||||||| ||||||||| |||| |||||    
T  34941458 gggtttttctatcatgtgcgaatttgcacatgataagaagtttaaaatagtaattttgcattggaactt 34941390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 112
Target Start/End: Complemental strand, 38222461 - 38222405
Alignment:
Q  57 ttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggt-aattttgtatt 112  Q
    ||||||||||||||||||| || |||||||||| |||||||| || |||||||||||    
T  38222461 ttctatcatctgcaaatttacacatgttaaaaaaattaaaattgtaaattttgtatt 38222405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 49181252 - 49181184
Alignment:
Q  51 gggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||||||||||||| ||||||||||||  |||||| ||| | ||||| |||| ||||||||| |||||    
T  49181252 gggtttttctatcatgtgcaaatttgcacctgttaagaagttcaaaatagtaaatttgtattgtaactt 49181184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 116
Target Start/End: Original strand, 4779436 - 4779499
Alignment:
Q  53 gtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaa 116  Q
    ||||||||||||| |||||||||||| ||||||| ||| ||| ||| | ||||||| |||||||    
T  4779436 gtttttctatcatgtgcaaatttgcacatgttaagaagtttataattgaaattttgcattgaaa 4779499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 24685012 - 24684949
Alignment:
Q  56 tttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||| |||||||||||| ||||||| ||| ||||||| | ||||||| |||| |||||    
T  24685012 tttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgcattggaactt 24684949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 96
Target Start/End: Complemental strand, 23553747 - 23553705
Alignment:
Q  54 tttttctatcatctgcaaatttgcaaatgttaaaaagattaaa 96  Q
    |||||||||||| |||||||||||| ||||||||||| |||||    
T  23553747 tttttctatcatgtgcaaatttgcacatgttaaaaagtttaaa 23553705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 29190815 - 29190888
Alignment:
Q  52 ggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaacttttgttt 125  Q
    |||||||||||||| |||||||||||| ||||||| ||| ||||| | |||| ||||  ||| ||||| |||||    
T  29190815 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttggaacttgtgttt 29190888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 96
Target Start/End: Original strand, 35999945 - 35999990
Alignment:
Q  51 gggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaa 96  Q
    ||||||||||||||| |||||||||||| ||||||| ||| |||||    
T  35999945 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 35999990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 39877011 - 39876942
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||||||||| || ||||||||| ||||||| ||  ||||||| |||| |||| |||| |||||    
T  39877011 agggtttttctatcatgtgtaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaactt 39876942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 119
Target Start/End: Complemental strand, 41970531 - 41970495
Alignment:
Q  83 ttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||| ||||||| ||||||||||||||||||||    
T  41970531 ttaaaaagtttaaaatagtaattttgtattgaaactt 41970495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 46803977 - 46803933
Alignment:
Q  53 gtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaa 97  Q
    ||||||||||||| |||||||||||| || |||||||| ||||||    
T  46803977 gtttttctatcatgtgcaaatttgcacatattaaaaagtttaaaa 46803933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 53961500 - 53961428
Alignment:
Q  53 gtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaacttttgttt 125  Q
    ||||||||||| | |||||||||||| ||||||| ||| ||||| | |||||||||  |||||| || |||||    
T  53961500 gtttttctatcgtgtgcaaatttgcacatgttaagaagtttaaattagtaattttgacttgaaatttgtgttt 53961428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 9e-17; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 39310782 - 39310846
Alignment:
Q  49 tagggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattg 113  Q
    ||||||||||||||||| |||||||||||| ||||||||||| ||||||| | ||||||||||||    
T  39310782 tagggtttttctatcatgtgcaaatttgcacatgttaaaaagtttaaaatagaaattttgtattg 39310846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 109
Target Start/End: Complemental strand, 34802147 - 34802089
Alignment:
Q  51 gggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgt 109  Q
    ||||||||||||||| |||||||||||| ||||||| ||| ||||||||||||||||||    
T  34802147 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatggtaattttgt 34802089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 119
Target Start/End: Complemental strand, 6180375 - 6180298
Alignment:
Q  42 atttatttagggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||| |||||||||||||||||| |||||||||||| ||||||| ||| ||||||| | |||||| ||||| |||||    
T  6180375 atttaattagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttatattggaactt 6180298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 113
Target Start/End: Complemental strand, 13322055 - 13321994
Alignment:
Q  52 ggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattg 113  Q
    |||||||||||||| |||||||||||| ||||||| ||| ||||||| | ||||||||||||    
T  13322055 ggtttttctatcatgtgcaaatttgcatatgttaagaagtttaaaatagaaattttgtattg 13321994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 23576411 - 23576480
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||||||||| |||||||||||| ||||||| ||  ||||||| |||| |||| ||||||||||    
T  23576411 agggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattgaaactt 23576480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 35512906 - 35512837
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||||||||| |||||||||||| ||||||| ||| ||||||| | |||||| ||||| |||||    
T  35512906 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttatattggaactt 35512837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 38812920 - 38812852
Alignment:
Q  51 gggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||||||||||||| |||||||||||| ||||||| ||| | ||||| | |||||| |||||||||||    
T  38812920 gggtttttctatcatgtgcaaatttgcacatgttaagaagttcaaaatagaaattttatattgaaactt 38812852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 5057180 - 5057114
Alignment:
Q  53 gtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||| || |||||||||||||||||| ||||| ||||| |||||| ||||  |||||||||    
T  5057180 gtttttctattatatgcaaatttgcaaatgttcaaaagtttaaagtggtaactttgacttgaaactt 5057114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 25465340 - 25465270
Alignment:
Q  49 tagggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||||||||||||||| |||||||||||| ||||||| ||| | ||||| |||| |||| |||| |||||    
T  25465340 tagggtttttctatcatgtgcaaatttgcacatgttaagaagttcaaaatagtaaatttgcattggaactt 25465270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 30172060 - 30172002
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttg 108  Q
    |||||||||||||||| |||||||||||| ||||||| ||| ||||| |||||| ||||    
T  30172060 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttg 30172002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 30187601 - 30187543
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttg 108  Q
    |||||||||||||||| |||||||||||| ||||||| ||| ||||| |||||| ||||    
T  30187601 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttg 30187543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 3168065 - 3168134
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||||||||| |||||||||||| | ||||||||| ||||||| | | ||| |||||| |||||    
T  3168065 agggtttttctatcatgtgcaaatttgcacacgttaaaaagtttaaaatagaattttagtattggaactt 3168134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 36490959 - 36490891
Alignment:
Q  51 gggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||||||||  ||||||||||| ||||||| ||| ||||||| |||| |||| |||| |||||    
T  36490959 gggtttttctatcatgagcaaatttgcacatgttaagaagtttaaaatagtaactttgcattggaactt 36490891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 107
Target Start/End: Original strand, 5875210 - 5875269
Alignment:
Q  48 ttagggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaatttt 107  Q
    ||||| |||||||||||| |||||||||||| ||||||| ||| ||||||| | ||||||    
T  5875210 ttaggatttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaatttt 5875269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 96
Target Start/End: Original strand, 6569977 - 6570028
Alignment:
Q  45 tatttagggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaa 96  Q
    ||||| ||||||||||||||| |||||||||||| ||||||| ||| |||||    
T  6569977 tattttgggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 6570028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 80
Target Start/End: Complemental strand, 9873005 - 9872970
Alignment:
Q  45 tatttagggtttttctatcatctgcaaatttgcaaa 80  Q
    ||||||||||||||||||||| ||||||||||||||    
T  9873005 tatttagggtttttctatcatgtgcaaatttgcaaa 9872970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 112
Target Start/End: Complemental strand, 25532387 - 25532328
Alignment:
Q  53 gtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtatt 112  Q
    ||||||||||||| |||||||||||  ||||||||||| ||||||  | |||||||||||    
T  25532387 gtttttctatcatatgcaaatttgcgcatgttaaaaagtttaaaaaagaaattttgtatt 25532328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 113
Target Start/End: Original strand, 1502718 - 1502780
Alignment:
Q  51 gggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattg 113  Q
    ||||||||||||||| |||||||||||| ||||||| ||  ||||||| |||| |||| ||||    
T  1502718 gggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattg 1502780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 89
Target Start/End: Original strand, 26767465 - 26767507
Alignment:
Q  47 tttagggtttttctatcatctgcaaatttgcaaatgttaaaaa 89  Q
    |||| |||||||||||||  |||||||||||||||||||||||    
T  26767465 tttatggtttttctatcacgtgcaaatttgcaaatgttaaaaa 26767507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 96
Target Start/End: Complemental strand, 313929 - 313884
Alignment:
Q  51 gggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaa 96  Q
    ||||||||||||||| |||||||||||| ||||||| ||| |||||    
T  313929 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 313884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 22167516 - 22167447
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||| ||||||| |||||||||||| ||| ||| ||| ||||||| | || ||||||||| |||||    
T  22167516 agggttttcctatcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttgtattggaactt 22167447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 103
Target Start/End: Complemental strand, 35438892 - 35438843
Alignment:
Q  54 tttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaa 103  Q
    |||||||||||| |||||||||||| ||||||| ||  ||||||||||||    
T  35438892 tttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatggtaa 35438843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 39781517 - 39781456
Alignment:
Q  55 ttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaa 116  Q
    ||||||||||| |||| ||||||| ||||||||||| || ||||   |||||||||||||||    
T  39781517 ttttctatcatgtgcatatttgcacatgttaaaaagttttaaataaaaattttgtattgaaa 39781456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 41676561 - 41676626
Alignment:
Q  54 tttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||||| |||||||||||| ||||||| ||  | |||||  |||||||||||| ||||||    
T  41676561 tttttctatcatgtgcaaatttgcacatgttaagaaattcaaaataataattttgtattaaaactt 41676626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 1366225 - 1366165
Alignment:
Q  53 gtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattg 113  Q
    ||||||||||||| ||||||||| || |||| || ||  ||||||| ||||||||||||||    
T  1366225 gtttttctatcatgtgcaaatttacacatgtaaagaaatttaaaatagtaattttgtattg 1366165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 51382495 - 51382447
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaat 98  Q
    |||||||||||||||| ||||| |||||| ||||||| ||| |||||||    
T  51382495 agggtttttctatcatgtgcaactttgcacatgttaagaagtttaaaat 51382447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 4e-16; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 119
Target Start/End: Complemental strand, 4969956 - 4969885
Alignment:
Q  48 ttagggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||||||||||| |||||||||||| ||||||| ||| ||||||| | |||||||||||| |||||    
T  4969956 ttagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaactt 4969885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 25709399 - 25709465
Alignment:
Q  53 gtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||||||||||| |||||||||||| ||||||| ||| ||||||| |||| ||||||||| |||||    
T  25709399 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttgtattggaactt 25709465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 119
Target Start/End: Complemental strand, 26037269 - 26037205
Alignment:
Q  55 ttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||||||||| |||||||||||| ||||||| ||| ||||||| | |||||||||||| |||||    
T  26037269 ttttctatcatgtgcaaatttgcagatgttaagaagtttaaaatagaaattttgtattggaactt 26037205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 33343168 - 33343100
Alignment:
Q  51 gggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||||||||||||| |||||||||||| ||||||| ||  ||||||| |||| ||||||||| |||||    
T  33343168 gggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgtattggaactt 33343100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 109
Target Start/End: Original strand, 7899487 - 7899542
Alignment:
Q  54 tttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgt 109  Q
    |||||||||||| |||||||||||| ||||||||||  |||||||||||| |||||    
T  7899487 tttttctatcatgtgcaaatttgcacatgttaaaaaatttaaaatggtaagtttgt 7899542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 9332142 - 9332067
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaacttttgttt 125  Q
    |||||||||||||||| |||||||||||| ||||||| ||| ||||| | |||| ||||  ||||||||| |||||    
T  9332142 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttgaaacttgtgttt 9332067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 120
Target Start/End: Original strand, 26050462 - 26050528
Alignment:
Q  54 tttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaacttt 120  Q
    |||||||||||| |||||||||||| ||||||| ||  |||||||||||| ||||| ||| ||||||    
T  26050462 tttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatggtaaatttgtcttgtaacttt 26050528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 120
Target Start/End: Original strand, 26059821 - 26059887
Alignment:
Q  54 tttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaacttt 120  Q
    |||||||||||| |||||||||||| ||||||| ||  |||||||||||| ||||| ||| ||||||    
T  26059821 tttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatggtaaatttgtcttgtaacttt 26059887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 26300749 - 26300683
Alignment:
Q  53 gtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||||| ||||| | |||||||||| ||||||||||| ||||||| |||| |||| ||||||||||    
T  26300749 gtttttccatcatgtacaaatttgcacatgttaaaaagtttaaaatagtaactttgaattgaaactt 26300683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 29398134 - 29398200
Alignment:
Q  53 gtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||||||||||| | |||||||||| ||||||| ||| ||||||| | |||||||||||| |||||    
T  29398134 gtttttctatcatgttcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaactt 29398200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 45501637 - 45501571
Alignment:
Q  53 gtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||||||||||| |||||||||||| || |||| ||| ||||||| | |||||||||||| |||||    
T  45501637 gtttttctatcatgtgcaaatttgcacatcttaagaagtttaaaatagaaattttgtattggaactt 45501571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 121
Target Start/End: Original strand, 8091311 - 8091380
Alignment:
Q  52 ggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactttt 121  Q
    |||||||||||||| ||||||||| || ||||||| ||| ||||||| |||| |||| |||| |||||||    
T  8091311 ggtttttctatcatgtgcaaatttacacatgttaagaagtttaaaatagtaactttgcattgtaactttt 8091380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 46290191 - 46290122
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||||||||| |||||||||||| ||||||| ||  ||||||| |||| |||| |||| |||||    
T  46290191 agggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaactt 46290122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 34270441 - 34270373
Alignment:
Q  51 gggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||||||||||||| |||||||||||| ||||||| ||  ||||||| |||| |||| |||| |||||    
T  34270441 gggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaactt 34270373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 39757108 - 39757160
Alignment:
Q  51 gggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaa 103  Q
    ||||||||||||||| |||||||||||| ||||||| ||| ||||||| ||||    
T  39757108 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagtaa 39757160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 820539 - 820586
Alignment:
Q  51 gggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaat 98  Q
    ||||||||||||||| |||||||||||| ||||||| ||| |||||||    
T  820539 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaat 820586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 96
Target Start/End: Complemental strand, 5833532 - 5833490
Alignment:
Q  54 tttttctatcatctgcaaatttgcaaatgttaaaaagattaaa 96  Q
    |||||||||||| |||||||||||| ||||||||||| |||||    
T  5833532 tttttctatcatgtgcaaatttgcacatgttaaaaagtttaaa 5833490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 24462938 - 24463000
Alignment:
Q  36 atattgatttatttagggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaat 98  Q
    ||||||||  || |||||| |||||||||| |||||||||||| ||||||| ||| |||||||    
T  24462938 atattgataaatgtagggtatttctatcatgtgcaaatttgcacatgttaagaagtttaaaat 24463000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 29692540 - 29692606
Alignment:
Q  53 gtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||||||||||| |||||||||| | ||||||| ||| ||||||| | ||||| ||||| ||||||    
T  29692540 gtttttctatcatgtgcaaatttgtacatgttaagaagtttaaaatagaaatttggtattaaaactt 29692606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 42750472 - 42750418
Alignment:
Q  42 atttatttagggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaa 96  Q
    ||||| |||||| ||||||||||| |||||||||||| ||||||| ||| |||||    
T  42750472 atttacttaggggttttctatcatatgcaaatttgcatatgttaagaagtttaaa 42750418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 47457459 - 47457497
Alignment:
Q  51 gggtttttctatcatctgcaaatttgcaaatgttaaaaa 89  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  47457459 gggtttttctatcatgtgcaaatttgcacatgttaaaaa 47457497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 96
Target Start/End: Original strand, 3561876 - 3561921
Alignment:
Q  51 gggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaa 96  Q
    ||||||||||||||| |||||||||||| ||||||| ||| |||||    
T  3561876 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 3561921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 32117995 - 32117926
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||||||||| |||||||||||| ||||||| ||  ||||| ||| || ||| | |||||||||    
T  32117995 agggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaagtggcaagtttatcttgaaactt 32117926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 3398401 - 3398332
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||||||||| |||||||||||| ||||||| ||| ||||||| | |||||||||||| |||||    
T  3398401 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaactt 3398332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 31567493 - 31567554
Alignment:
Q  55 ttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaa 116  Q
    ||||||||||| |||||||||||| ||||||||||  |||||||||||||||||| ||||||    
T  31567493 ttttctatcatatgcaaatttgcacatgttaaaaaatttaaaatggtaattttgtcttgaaa 31567554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 53 - 116
Target Start/End: Complemental strand, 40980551 - 40980488
Alignment:
Q  53 gtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaa 116  Q
    ||||||||||||| |||||||||||| || |||||||| ||||||| | |||||||||||||||    
T  40980551 gtttttctatcatgtgcaaatttgcacatattaaaaagtttaaaatagaaattttgtattgaaa 40980488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 6863738 - 6863668
Alignment:
Q  49 tagggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||||||||||||||| |||||||||||| ||||||||||  ||||||| |||| ||| ||||| |||||    
T  6863738 tagggtttttctatcatgtgcaaatttgcacatgttaaaaaatttaaaatagtaactttatattggaactt 6863668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 18841699 - 18841768
Alignment:
Q  47 tttagggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaa 116  Q
    |||| ||||||| |||| | |||||||||||| ||||||||||| ||||||| | |||||||||||||||    
T  18841699 tttatggtttttttatcgtgtgcaaatttgcatatgttaaaaagtttaaaatagaaattttgtattgaaa 18841768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 23995416 - 23995482
Alignment:
Q  53 gtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||| || |||||||||| | ||||||| ||| ||||||| |||||||| |||||||||||    
T  23995416 gtttttctattatgtgcaaatttgtacatgttaagaagtttaaaatagtaattttatattgaaactt 23995482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 32019984 - 32020050
Alignment:
Q  53 gtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||||||||||| |||||||||||| ||||||| ||  |||||||||||| ||||| ||| |||||    
T  32019984 gtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatggtaagtttgtcttggaactt 32020050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 30839962 - 30839893
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||||||||| |||||||||||| ||||||| ||  ||||||| |||| |||| |||| |||||    
T  30839962 agggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaactt 30839893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 36597760 - 36597691
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||||||||| |||||||||||| ||||||| ||  ||||||| |||| |||| |||| |||||    
T  36597760 agggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaactt 36597691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 119
Target Start/End: Complemental strand, 11636914 - 11636843
Alignment:
Q  48 ttagggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||||||||||| |||||||||||| ||| ||| ||| ||||| | |||| ||||  |||||||||    
T  11636914 ttagggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttgaaactt 11636843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 116
Target Start/End: Original strand, 15240950 - 15241013
Alignment:
Q  53 gtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaa 116  Q
    ||||||||||||| |||||||||| | ||||||||||| | |||||  ||| ||||||||||||    
T  15240950 gtttttctatcatgtgcaaatttgtacatgttaaaaagttcaaaatattaaatttgtattgaaa 15241013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 103
Target Start/End: Complemental strand, 35151398 - 35151347
Alignment:
Q  52 ggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaa 103  Q
    |||||||| ||||| |||||||||||| ||||||||||| ||||||| ||||    
T  35151398 ggtttttcaatcatgtgcaaatttgcatatgttaaaaagtttaaaatagtaa 35151347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 2795703 - 2795629
Alignment:
Q  51 gggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaacttttgttt 125  Q
    ||||||||||||||| |||||||||||| ||||||| ||| ||||| | |||| ||||  ||| ||||| |||||    
T  2795703 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttt 2795629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 4047593 - 4047547
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaa 96  Q
    |||||||||||||||| |||||||||||| ||||||| ||| |||||    
T  4047593 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 4047547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 119
Target Start/End: Original strand, 36474637 - 36474695
Alignment:
Q  61 atcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||| |||||| ||||| || |||||||| ||||||| | ||||||||||||||||||    
T  36474637 atcatgtgcaaaattgcacatattaaaaagtttaaaatagaaattttgtattgaaactt 36474695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 108
Target Start/End: Complemental strand, 30893805 - 30893752
Alignment:
Q  55 ttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttg 108  Q
    ||||||||||| |||||||||||| ||||||| ||| ||||||| |||| ||||    
T  30893805 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttg 30893752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 103
Target Start/End: Complemental strand, 34578188 - 34578139
Alignment:
Q  54 tttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaa 103  Q
    ||||| |||||| |||||||||||| ||||||||||| ||||||| ||||    
T  34578188 tttttttatcatgtgcaaatttgcacatgttaaaaagtttaaaatagtaa 34578139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 38389635 - 38389570
Alignment:
Q  43 tttatttagggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttg 108  Q
    |||||| |||||||||||||||| |||||||||||| ||||||| ||| ||||| |||||||||||    
T  38389635 tttattaagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttg 38389570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 52 - 119
Target Start/End: Complemental strand, 2566661 - 2566594
Alignment:
Q  52 ggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||||||| ||||||||| || |||||| |||  ||||||| ||||||||||||||||||||    
T  2566661 ggtttttctatcatgtgcaaatttacacatgttagaaaatttaaaatagtaattttgtattgaaactt 2566594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 50 - 113
Target Start/End: Complemental strand, 50204584 - 50204521
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattg 113  Q
    |||||||||||||||| |||||||||||| ||||||| ||| ||||||| | ||||||||||||    
T  50204584 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattg 50204521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 23523127 - 23523069
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttg 108  Q
    |||||||||||||||| |||||||||||| ||||||| ||| ||||| |||||||||||    
T  23523127 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttg 23523069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 119
Target Start/End: Complemental strand, 51401625 - 51401552
Alignment:
Q  46 atttagggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||||||||||||||| || | |||||||||| ||||||| ||| ||||||| | |||||||||||| |||||    
T  51401625 atttagggtttttctattatgtacaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaactt 51401552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 51618229 - 51618159
Alignment:
Q  49 tagggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||||||||||||||| |||||||||||| ||||||| ||| || |||| |||| |||| |||| |||||    
T  51618229 tagggtttttctatcatgtgcaaatttgcacatgttaagaagtttcaaattgtaactttgcattggaactt 51618159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 2571449 - 2571380
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||||||||| |||||||||||| ||||||| ||  ||||||| |||| |||| |||| |||||    
T  2571449 agggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaactt 2571380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 119
Target Start/End: Complemental strand, 8165823 - 8165758
Alignment:
Q  54 tttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||||| |||||||||||| ||||||| ||| |||||||   |||||||||||| |||||    
T  8165823 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatataaattttgtattggaactt 8165758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 10307947 - 10307878
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||||||||| |||||||||||| ||||||| ||  ||||||| |||| |||| |||| |||||    
T  10307947 agggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaaatttgcattggaactt 10307878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 45983687 - 45983618
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||||||| |||||| |||||||||||| | ||||| ||| ||||||| | |||||| |||||||||||    
T  45983687 agggtttttttatcatgtgcaaatttgcacaggttaagaagtttaaaatagaaattttatattgaaactt 45983618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 98
Target Start/End: Complemental strand, 9247912 - 9247869
Alignment:
Q  55 ttttctatcatctgcaaatttgcaaatgttaaaaagattaaaat 98  Q
    ||||||||||| |||||||||||| ||||||||| |||||||||    
T  9247912 ttttctatcatgtgcaaatttgcatatgttaaaatgattaaaat 9247869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 23803049 - 23803112
Alignment:
Q  56 tttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||| |||||||||||| ||||||| ||| ||||||| | ||||||| |||| |||||    
T  23803049 tttctatcatatgcaaatttgcacatgttaagaagtttaaaatagaaattttgcattggaactt 23803112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 116
Target Start/End: Original strand, 33474473 - 33474536
Alignment:
Q  53 gtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaa 116  Q
    ||||||||||||| |||||||||||| ||||||| ||| ||| ||| | ||||||| |||||||    
T  33474473 gtttttctatcatgtgcaaatttgcacatgttaagaagtttataattgaaattttgcattgaaa 33474536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 112
Target Start/End: Complemental strand, 40930229 - 40930170
Alignment:
Q  53 gtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtatt 112  Q
    ||||||||||||| |||||||||||| ||||||| ||| ||||||| | |||||| ||||    
T  40930229 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttatatt 40930170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 51567821 - 51567883
Alignment:
Q  54 tttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||||| |||||||||||| |||||   ||| ||||||| | ||||||||||||||||||    
T  51567821 tttttctatcatgtgcaaatttgcacatgtt---aagtttaaaatagaaattttgtattgaaactt 51567883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 108
Target Start/End: Original strand, 12515471 - 12515529
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttg 108  Q
    |||||||||||||||| || ||||||||| ||||||||||  ||||||| |||| ||||    
T  12515471 agggtttttctatcatgtgtaaatttgcacatgttaaaaaatttaaaatagtaactttg 12515529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 42180234 - 42180164
Alignment:
Q  49 tagggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||| |||||||||||| || ||||||||| ||||||| ||| |||||||   |||||||||||| |||||    
T  42180234 taggatttttctatcatgtgtaaatttgcacatgttaagaagtttaaaataaaaattttgtattggaactt 42180164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 96
Target Start/End: Complemental strand, 3863509 - 3863464
Alignment:
Q  51 gggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaa 96  Q
    ||||||||||||||| |||||||||||| ||||||| ||| |||||    
T  3863509 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 3863464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 8497421 - 8497486
Alignment:
Q  54 tttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||||| || |||||||   ||||||||||  ||||||| ||||||||| ||||||||||    
T  8497421 tttttctatcatatgtaaatttggccatgttaaaaactttaaaattgtaattttgcattgaaactt 8497486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 36426408 - 36426464
Alignment:
Q  52 ggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttg 108  Q
    |||||||||||||| || |||||| || ||||||| ||| ||||| |||||||||||    
T  36426408 ggtttttctatcatgtgtaaatttacacatgttaagaagtttaaagtggtaattttg 36426464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 34692534 - 34692466
Alignment:
Q  51 gggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||||||||||||| |||||||||||| ||||||| ||| ||||||| | |||||||||||| |||||    
T  34692534 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaactt 34692466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 125
Target Start/End: Complemental strand, 31568288 - 31568215
Alignment:
Q  52 ggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaacttttgttt 125  Q
    |||||||||||||| |||||||||||| ||||||||||| ||||| | |||| ||||  ||||||||| |||||    
T  31568288 ggtttttctatcatgtgcaaatttgcacatgttaaaaagtttaaagtagtaactttgatttgaaacttgtgttt 31568215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 108
Target Start/End: Complemental strand, 6017038 - 6016979
Alignment:
Q  49 tagggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttg 108  Q
    |||| |||||||||||| |||||||||||| ||||||||||| ||||| |||||| ||||    
T  6017038 taggatttttctatcatgtgcaaatttgcacatgttaaaaagtttaaagtggtaactttg 6016979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 10887207 - 10887152
Alignment:
Q  53 gtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttg 108  Q
    ||||||||||||| |||||||||||| ||||||| ||| ||||| |||||||||||    
T  10887207 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttg 10887152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 29065424 - 29065483
Alignment:
Q  52 ggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtat 111  Q
    |||||||||||||| |||||| ||||| ||||||||||| ||||||| ||||| ||||||    
T  29065424 ggtttttctatcatgtgcaaacttgcacatgttaaaaagtttaaaatagtaatattgtat 29065483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 29120277 - 29120336
Alignment:
Q  52 ggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtat 111  Q
    |||||||||||||| |||||| ||||| ||||||||||| ||||||| ||||| ||||||    
T  29120277 ggtttttctatcatgtgcaaacttgcacatgttaaaaagtttaaaatagtaatattgtat 29120336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 3261261 - 3261211
Alignment:
Q  48 ttagggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaat 98  Q
    |||||||||||||||||| ||||||||| || ||||||||||| |||||||    
T  3261261 ttagggtttttctatcatgtgcaaatttacacatgttaaaaagtttaaaat 3261211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 28943765 - 28943835
Alignment:
Q  49 tagggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||||||||||||||| |||||||||||| ||||||| ||  ||||||| |||| |||| |||| |||||    
T  28943765 tagggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaactt 28943835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 111
Target Start/End: Original strand, 29074438 - 29074496
Alignment:
Q  53 gtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtat 111  Q
    ||||||||||||| |||||| ||||| ||||||||||| ||||||| ||||| ||||||    
T  29074438 gtttttctatcatgtgcaaacttgcacatgttaaaaagtttaaaattgtaatattgtat 29074496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 111
Target Start/End: Original strand, 29079202 - 29079260
Alignment:
Q  53 gtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtat 111  Q
    ||||||||||||| |||||| ||||| ||||||||||| ||||||| ||||| ||||||    
T  29079202 gtttttctatcatgtgcaaacttgcacatgttaaaaagtttaaaattgtaatattgtat 29079260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 111
Target Start/End: Original strand, 29107011 - 29107069
Alignment:
Q  53 gtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtat 111  Q
    ||||||||||||| |||||| ||||| ||||||||||| ||||||| ||||| ||||||    
T  29107011 gtttttctatcatgtgcaaacttgcacatgttaaaaagtttaaaattgtaatattgtat 29107069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 30591163 - 30591229
Alignment:
Q  53 gtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||||||||||| ||||||||| || ||||||| ||| || |||||||||||||| |||| |||||    
T  30591163 gtttttctatcatgtgcaaatttacacatgttaagaagttttaaatggtaattttgcattgtaactt 30591229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 17552584 - 17552653
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||||||||| |||||||||||| ||||||| ||  ||||||| |||||| || |||| |||||    
T  17552584 agggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaattatgcattggaactt 17552653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 12454249 - 12454193
Alignment:
Q  47 tttagggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaa 103  Q
    ||||||||||||||||||| || ||||||||| || |||||||  ||||||||||||    
T  12454249 tttagggtttttctatcatatgtaaatttgcacattttaaaaaatttaaaatggtaa 12454193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 14228124 - 14228192
Alignment:
Q  51 gggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||||||||||||| |||||||||||| ||||||| ||  ||||||| |||| |||| |||| |||||    
T  14228124 gggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaactt 14228192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 108
Target Start/End: Complemental strand, 33017907 - 33017847
Alignment:
Q  48 ttagggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttg 108  Q
    ||||||||||||||| || |||||||||||| ||||||||||  ||||||| |||| ||||    
T  33017907 ttagggtttttctattatgtgcaaatttgcacatgttaaaaaatttaaaatagtaactttg 33017847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 103
Target Start/End: Original strand, 29863301 - 29863352
Alignment:
Q  52 ggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaa 103  Q
    |||||||||||||| |||||||||||| ||||||| ||| ||||||| ||||    
T  29863301 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagtaa 29863352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 115
Target Start/End: Complemental strand, 4372017 - 4371955
Alignment:
Q  53 gtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaa 115  Q
    |||||||||||||  |||||||| || ||||||| ||| ||||||| | ||||||||||||||    
T  4372017 gtttttctatcatgcgcaaatttacacatgttaagaagtttaaaatagaaattttgtattgaa 4371955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 27819627 - 27819693
Alignment:
Q  53 gtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||||||||||| | |||||||||| ||||||| ||| ||||||| ||| |||||| || ||||||    
T  27819627 gtttttctatcatgtacaaatttgcacatgttaagaagtttaaaattgtatttttgtcttaaaactt 27819693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 18332686 - 18332743
Alignment:
Q  51 gggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttg 108  Q
    ||||||||||||||| ||||||||| || ||||||| ||| ||||| || ||||||||    
T  18332686 gggtttttctatcatgtgcaaattttcacatgttaagaagtttaaagtgataattttg 18332743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 31790917 - 31790982
Alignment:
Q  54 tttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||||| |||||||||||| || |||| ||  ||||||||| || ||||| |||||||||    
T  31790917 tttttctatcatatgcaaatttgcacatattaagaaatttaaaatggcaagtttgtcttgaaactt 31790982  T

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Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 2830670 - 2830726
Alignment:
Q  43 tttattta-gggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaat 98  Q
    |||||||| ||||||||||||||| | |||||||||| ||||||| ||| |||||||    
T  2830670 tttatttatgggtttttctatcatgtacaaatttgcacatgttaagaagtttaaaat 2830726  T

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Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 13391856 - 13391808
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaat 98  Q
    |||||||||||||||| |||||||||||  ||||||| ||| |||||||    
T  13391856 agggtttttctatcatgtgcaaatttgcgcatgttaagaagtttaaaat 13391808  T

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Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 43806540 - 43806472
Alignment:
Q  51 gggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||||||||||| | || ||||||||| ||||||||||| ||||||| | ||||||||||||||||||    
T  43806540 gggtttttctatcgtgtgtaaatttgcacatgttaaaaagtttaaaatagaaattttgtattgaaactt 43806472  T

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Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 4576323 - 4576392
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||||||||| |||||||| ||| ||||||| ||  ||||||| | ||||||||||||||||||    
T  4576323 agggtttttctatcatgtgcaaattcgcatatgttaagaaatttaaaatagaaattttgtattgaaactt 4576392  T

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Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 26003348 - 26003409
Alignment:
Q  55 ttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaa 116  Q
    ||||||||||| |||||||||||| ||||||| ||| ||||||| | |||||||||||||||    
T  26003348 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattgaaa 26003409  T

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Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 9747497 - 9747429
Alignment:
Q  51 gggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||||||||||||| ||||||||| || ||||||| ||| ||||||| |||||||||| ||| |||||    
T  9747497 gggtttttctatcatgtgcaaattttcacatgttaagaagtttaaaatagtaattttgtcttggaactt 9747429  T

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Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 119
Target Start/End: Original strand, 15411612 - 15411688
Alignment:
Q  43 tttatttagggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||| |||||| ||||||| ||| |||||||||||| ||||||| ||| ||||||| |||| ||||| |||||||||    
T  15411612 tttacttaggggttttctaacatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttgtcttgaaactt 15411688  T

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Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 113
Target Start/End: Complemental strand, 8065304 - 8065241
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattg 113  Q
    |||||||||||||||| |||||||||||| ||||||| ||| ||||||| | |||||| |||||    
T  8065304 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttatattg 8065241  T

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Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 107
Target Start/End: Original strand, 38248417 - 38248474
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaatttt 107  Q
    |||||||||||||||| |||||||||||| ||||||| ||  ||||||| ||||||||    
T  38248417 agggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaatttt 38248474  T

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Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 7720293 - 7720233
Alignment:
Q  53 gtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattg 113  Q
    ||||||||||||| ||||||||||||  |||||||||| |||| || | ||||||||||||    
T  7720293 gtttttctatcatgtgcaaatttgcacgtgttaaaaagtttaagatagaaattttgtattg 7720233  T

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Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 116
Target Start/End: Original strand, 5853463 - 5853526
Alignment:
Q  53 gtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaa 116  Q
    ||||||||||||| |||||||||||| ||||||| ||| ||| ||| | ||||||| |||||||    
T  5853463 gtttttctatcatgtgcaaatttgcacatgttaagaagtttataattgaaattttgcattgaaa 5853526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 96
Target Start/End: Complemental strand, 6109571 - 6109524
Alignment:
Q  49 tagggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaa 96  Q
    ||||||||||||||||| |||||||||||| ||||||| ||| |||||    
T  6109571 tagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 6109524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 8770887 - 8770958
Alignment:
Q  54 tttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaacttttgttt 125  Q
    ||||| |||||| |||||||||||| ||||||| ||| ||||| | |||||||||  |||||| ||||||||    
T  8770887 tttttttatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaattttgacttgaaatttttgttt 8770958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 116
Target Start/End: Complemental strand, 9895190 - 9895127
Alignment:
Q  53 gtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaa 116  Q
    ||||||||||||| ||||||||| |||||||||| ||| |||||||  ||| ||| ||||||||    
T  9895190 gtttttctatcatatgcaaattttcaaatgttaagaagtttaaaataataaatttatattgaaa 9895127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 16126556 - 16126631
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaacttttgttt 125  Q
    |||||||||||||||| |||||||||||| ||||||| ||| ||||| | |||| |||   ||||||||| |||||    
T  16126556 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttgaaacttgtgttt 16126631  T

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Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 116
Target Start/End: Original strand, 16493532 - 16493595
Alignment:
Q  53 gtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaa 116  Q
    ||||||||||||| |||||||||||| ||||||| ||| ||| ||| | ||||||| |||||||    
T  16493532 gtttttctatcatgtgcaaatttgcacatgttaagaagtttataattgaaattttgcattgaaa 16493595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 113
Target Start/End: Original strand, 24729574 - 24729637
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattg 113  Q
    |||||||||||||||| |||||||||||| ||||||| ||  ||||||| |||| |||| ||||    
T  24729574 agggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattg 24729637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 7757782 - 7757852
Alignment:
Q  49 tagggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||||||||||||||| ||||||||| || ||||||| ||  ||||||| |||| |||| |||| |||||    
T  7757782 tagggtttttctatcatgtgcaaatttacacatgttaagaaatttaaaatagtaactttgcattggaactt 7757852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 5583555 - 5583624
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||||||||||||||  ||||||||||| ||||||| ||  ||||||| |||| |||| |||| |||||    
T  5583555 agggtttttctatcatgcgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaactt 5583624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 107
Target Start/End: Complemental strand, 12016847 - 12016790
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaatttt 107  Q
    |||||||||||||||| |||||||||||| || |||| ||| ||||| | ||||||||    
T  12016847 agggtttttctatcatgtgcaaatttgcacatattaagaagtttaaagtagtaatttt 12016790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 25997999 - 25998068
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||||||||  ||||||||||||  ||||||||| |||||||   |||||||| |||| |||||    
T  25997999 agggtttttctatcacgtgcaaatttgcatgtgttaaaaaaattaaaaaattaattttgcattggaactt 25998068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 29157826 - 29157895
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||||||||| |||||||||||| ||||||| ||  || |||| |||| |||| |||| |||||    
T  29157826 agggtttttctatcatgtgcaaatttgcacatgttaagaaattttaaatagtaactttgcattggaactt 29157895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 43388478 - 43388547
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||||||||| |||||||||||| ||||||| ||| | |||| ||||  |||| |||| |||||    
T  43388478 agggtttttctatcatgtgcaaatttgcacatgttaagaagttcaaaaaggtatgtttgcattggaactt 43388547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 25295849 - 25295885
Alignment:
Q  49 tagggtttttctatcatctgcaaatttgcaaatgtta 85  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  25295849 tagggtttttctatcatttgcaaatttgcacatgtta 25295885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 41160 - 41094
Alignment:
Q  53 gtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    ||||||||||||| || ||||||| | ||||||| ||| |||||||  |||||||||||||||||||    
T  41160 gtttttctatcatgtgtaaatttgtatatgttaagaagtttaaaataataattttgtattgaaactt 41094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 96
Target Start/End: Original strand, 37111 - 37157
Alignment:
Q  50 agggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaa 96  Q
    |||||||||||||||| |||||||||||| ||||||| ||| |||||    
T  37111 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 37157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 119
Target Start/End: Original strand, 44293 - 44360
Alignment:
Q  52 ggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaactt 119  Q
    |||||||||||||| |||||||||||| || |||||||| |||||||   || |||| ||||||||||    
T  44293 ggtttttctatcatgtgcaaatttgcacatattaaaaagtttaaaataacaactttgcattgaaactt 44360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 103
Target Start/End: Complemental strand, 13264 - 13213
Alignment:
Q  52 ggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaa 103  Q
    |||||||||||||| |||||||||||| ||||||| ||| ||||||| ||||    
T  13264 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagtaa 13213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 96
Target Start/End: Complemental strand, 5868 - 5826
Alignment:
Q  54 tttttctatcatctgcaaatttgcaaatgttaaaaagattaaa 96  Q
    |||||||||||| |||||||||||| ||||||||||| |||||    
T  5868 tttttctatcatgtgcaaatttgcacatgttaaaaagtttaaa 5826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 52777 - 52851
Alignment:
Q  51 gggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaacttttgttt 125  Q
    ||||||||||||||| |||||||||||| ||||||| ||| ||||| | |||| ||||  ||| ||||| |||||    
T  52777 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttt 52851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 145857 - 145783
Alignment:
Q  51 gggtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattgaaacttttgttt 125  Q
    ||||||||||||||| |||||||||||| ||||||| ||| ||||| | |||| ||||  ||| ||||| |||||    
T  145857 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttt 145783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 24527 - 24587
Alignment:
Q  53 gtttttctatcatctgcaaatttgcaaatgttaaaaagattaaaatggtaattttgtattg 113  Q
    ||||||||||||| ||||||||| || |||| || ||  ||||||| ||||||||||||||    
T  24527 gtttttctatcatgtgcaaatttacacatgtaaagaaatttaaaatagtaattttgtattg 24587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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