View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6015_low_24 (Length: 238)
Name: NF6015_low_24
Description: NF6015
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6015_low_24 |
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Alignment Details
Target: chr6 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 30419284 - 30419454
Alignment:
| Q |
1 |
tttttgaaatatacacctctcgcactctcccgaatttagaaagnnnnnnnnnccctcaaagatccaccactctatcaccatctgggaagtttgtgaagaa |
100 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
30419284 |
tttttgaaatatacacctctcgcactctcctgaatttagaaagaaaaaaaa-ccctcaaagatccaccactctatcaccatctgagaagtttgtgaagaa |
30419382 |
T |
|
| Q |
101 |
aaataatgtggtaatatgagaaagatgattgatgtaacctatcatcgtcccctaacctccgctttgtgtgaa |
172 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
30419383 |
aaataatgtggtaatatgagaaagatgattgatgtaacctatcaccgtcccctaacctccgctttgtgtgaa |
30419454 |
T |
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