View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6016_low_30 (Length: 277)
Name: NF6016_low_30
Description: NF6016
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6016_low_30 |
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Alignment Details
Target: chr7 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 18 - 270
Target Start/End: Original strand, 40224208 - 40224460
Alignment:
| Q |
18 |
tagagaatatttcaaatcataaaacaaagtgttgggcaaattaccagaaaaattatctggtacgaggatgtaactatcttggtctgagcaactctttctt |
117 |
Q |
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| T |
40224208 |
tagagaatatttcaaatcataaaacaaagtgttgggcaaattaccagaaaaattatctggtacgaggatgtaactatcttggtctgagcaactctttctt |
40224307 |
T |
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| Q |
118 |
gtttctgtcgcagaccctgagtgagtcccacaaagattaaacaaaataatgtctcaatttcaacacgaaaaacgtaaaatgaaaccaaactcaaagaaaa |
217 |
Q |
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| T |
40224308 |
gtttctgtcgcagaccctgagtgagtcccacaaagattaaacaaaataatgtctcaatttcaacacgaaaaacgtaaaatgaaaccaaactcaaagaaaa |
40224407 |
T |
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| Q |
218 |
ccaatcacaatcttaattaaaataattgagtttcacctgtaacagaataatct |
270 |
Q |
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| T |
40224408 |
ccaatcacaatcttaattaaaataattgagtttcacctgtaacagaataatct |
40224460 |
T |
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