View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6017_low_6 (Length: 335)
Name: NF6017_low_6
Description: NF6017
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6017_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 21 - 324
Target Start/End: Complemental strand, 7430024 - 7429721
Alignment:
| Q |
21 |
aagtgtcgtgtccggtgttggtgtttgcgcttcattgtgctaagcaagttatttatttgtttatgcagtcgatgtcatacgcgaaattggctggacttca |
120 |
Q |
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| T |
7430024 |
aagtgtcgtgtccggtgttggtgtttgcacttcattgtgctaagcaagttattt-tttgtttatgcagtcgatgtcatacgcgaaattggctggacttaa |
7429926 |
T |
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| Q |
121 |
acctatatatggactttgtaagtttgcttaattactaagccgttgatgatctttt--ctggaatatgcatatgtttaaatttgttttagaagtagatttg |
218 |
Q |
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| T |
7429925 |
accgatatatggactttgtaagtttgcttaattactaagctgttgatgattttttttctggaatatgcatatgttcaaatttgttttagaagtagatttg |
7429826 |
T |
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| Q |
219 |
attaaagtcaaacgcttttacgattggttgacagtgtaacaaatttatacacgactgtatacatgaattaaatcatatgattaaagtccaacgttgatat |
318 |
Q |
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||||| |||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
7429825 |
attaa-gtcaaaagcttttacgattggttgacagtgtaacatatttatacatgactgtatacatgaattaaatcttatgattaaagtccaacgttgatat |
7429727 |
T |
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| Q |
319 |
gatgat |
324 |
Q |
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|||||| |
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| T |
7429726 |
gatgat |
7429721 |
T |
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