View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6019_high_45 (Length: 261)
Name: NF6019_high_45
Description: NF6019
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6019_high_45 |
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Alignment Details
Target: chr8 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 9 - 246
Target Start/End: Original strand, 11410799 - 11411036
Alignment:
| Q |
9 |
gaagaatatgcaccatttgtttgtggaaatgactcaattgttcaacaaaagtggagagaattatgcttgaattggtgattgtggaaatttggatttgatt |
108 |
Q |
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| T |
11410799 |
gaagaatatgcaccatttgtttgtggaaatgactcaattattcaacaaaagtggagagaattatgcttgaattggtgattgtggaaatttggatttgatt |
11410898 |
T |
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| Q |
109 |
tgagtaatttgaaagnnnnnnnnaggataagctttaattgtgattttaaaacttcttcatcaagttttgatcattgacagaacatttattggaacaaaag |
208 |
Q |
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| T |
11410899 |
tgagtaatttgaaagttttttttaggataagctttaattgtgattttaaaacttcttcatcaagttttgatcattgacagaacatttattggaacaaaag |
11410998 |
T |
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| Q |
209 |
gggaatcaattagctgtgtgagtctttgattctttttc |
246 |
Q |
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| T |
11410999 |
gggaatcaatgagctgtgtgagtctttgattctttttc |
11411036 |
T |
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