View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6019_high_51 (Length: 252)

Name: NF6019_high_51
Description: NF6019
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6019_high_51
NF6019_high_51
[»] chr4 (34 HSPs)
chr4 (13-248)||(11863077-11863314)
chr4 (79-187)||(12585546-12585654)
chr4 (76-188)||(47416465-47416577)
chr4 (84-187)||(49039432-49039535)
chr4 (90-193)||(6481565-6481668)
chr4 (84-187)||(20610744-20610847)
chr4 (84-187)||(33359822-33359925)
chr4 (84-187)||(41492486-41492588)
chr4 (84-187)||(21023339-21023441)
chr4 (79-158)||(23935042-23935121)
chr4 (84-187)||(54854166-54854269)
chr4 (86-188)||(6202610-6202712)
chr4 (130-163)||(33708800-33708833)
chr4 (105-186)||(34773673-34773752)
chr4 (88-189)||(37997831-37997932)
chr4 (85-157)||(42432014-42432086)
chr4 (84-187)||(49319398-49319502)
chr4 (84-187)||(20753114-20753215)
chr4 (82-185)||(39449403-39449505)
chr4 (89-163)||(52031216-52031291)
chr4 (149-187)||(8241168-8241206)
chr4 (89-187)||(20166326-20166424)
chr4 (84-186)||(54264933-54265035)
chr4 (82-187)||(3544421-3544524)
chr4 (84-165)||(29785155-29785236)
chr4 (89-149)||(52757275-52757335)
chr4 (130-195)||(55677156-55677221)
chr4 (79-187)||(3465583-3465689)
chr4 (84-160)||(9172385-9172461)
chr4 (84-188)||(32885693-32885795)
chr4 (103-187)||(33076554-33076637)
chr4 (84-184)||(36045835-36045935)
chr4 (84-187)||(36257699-36257800)
chr4 (84-187)||(56546438-56546539)
[»] chr7 (39 HSPs)
chr7 (79-195)||(35498398-35498513)
chr7 (79-195)||(24579265-24579381)
chr7 (82-180)||(16814700-16814798)
chr7 (84-195)||(3246468-3246576)
chr7 (84-187)||(34693757-34693858)
chr7 (84-187)||(1513492-1513594)
chr7 (84-187)||(44409206-44409308)
chr7 (79-195)||(35195843-35195959)
chr7 (84-195)||(43635593-43635704)
chr7 (85-187)||(25711119-25711220)
chr7 (82-187)||(27726356-27726461)
chr7 (113-187)||(33236254-33236328)
chr7 (142-187)||(26734258-26734303)
chr7 (84-189)||(43712298-43712403)
chr7 (84-185)||(47552218-47552317)
chr7 (82-186)||(7908713-7908814)
chr7 (105-192)||(20947787-20947872)
chr7 (85-189)||(23799306-23799410)
chr7 (84-163)||(41417286-41417366)
chr7 (85-184)||(2366363-2366460)
chr7 (84-195)||(7392285-7392396)
chr7 (84-187)||(10020456-10020559)
chr7 (89-188)||(29710089-29710185)
chr7 (111-154)||(32250361-32250404)
chr7 (84-187)||(37917397-37917500)
chr7 (84-158)||(924308-924382)
chr7 (93-187)||(32309135-32309229)
chr7 (82-163)||(41507730-41507812)
chr7 (84-181)||(47514210-47514305)
chr7 (111-160)||(15716671-15716720)
chr7 (85-186)||(35368402-35368501)
chr7 (82-119)||(43209404-43209441)
chr7 (143-187)||(1649216-1649260)
chr7 (84-148)||(14967660-14967724)
chr7 (84-148)||(15397136-15397200)
chr7 (84-163)||(19126741-19126821)
chr7 (89-193)||(30152751-30152853)
chr7 (84-163)||(31475851-31475931)
chr7 (128-180)||(42976594-42976646)
[»] chr2 (35 HSPs)
chr2 (84-187)||(39334868-39334971)
chr2 (84-187)||(34107279-34107382)
chr2 (84-185)||(22355088-22355189)
chr2 (84-187)||(3179329-3179430)
chr2 (89-188)||(14307680-14307779)
chr2 (113-163)||(36190088-36190138)
chr2 (103-181)||(37123210-37123288)
chr2 (90-187)||(1244580-1244677)
chr2 (111-180)||(22014646-22014715)
chr2 (89-186)||(25071220-25071317)
chr2 (85-185)||(16028099-16028197)
chr2 (91-187)||(20942096-20942192)
chr2 (92-187)||(12206511-12206606)
chr2 (89-195)||(6282245-6282351)
chr2 (84-186)||(30474185-30474285)
chr2 (89-183)||(32288386-32288480)
chr2 (133-187)||(32677383-32677437)
chr2 (103-188)||(4529749-4529834)
chr2 (84-189)||(10262744-10262847)
chr2 (90-187)||(29713076-29713173)
chr2 (143-187)||(10602070-10602114)
chr2 (84-163)||(15392222-15392301)
chr2 (81-160)||(18386826-18386905)
chr2 (84-187)||(34620523-34620624)
chr2 (84-187)||(36426845-36426946)
chr2 (113-196)||(37516024-37516107)
chr2 (84-187)||(41305053-41305156)
chr2 (85-187)||(34376548-34376650)
chr2 (111-187)||(3364757-3364831)
chr2 (79-163)||(32527088-32527173)
chr2 (143-184)||(36413824-36413865)
chr2 (111-159)||(23683728-23683776)
chr2 (131-195)||(36345160-36345223)
chr2 (85-165)||(38807887-38807967)
chr2 (143-195)||(42507352-42507404)
[»] scaffold0119 (1 HSPs)
scaffold0119 (84-195)||(1044-1155)
[»] chr6 (27 HSPs)
chr6 (84-195)||(26669638-26669749)
chr6 (84-197)||(9422838-9422952)
chr6 (90-187)||(6455464-6455561)
chr6 (85-187)||(4844149-4844251)
chr6 (84-188)||(22730687-22730792)
chr6 (84-187)||(14949006-14949110)
chr6 (130-197)||(19680225-19680292)
chr6 (80-187)||(31595172-31595279)
chr6 (82-187)||(9031769-9031875)
chr6 (90-184)||(30833028-30833122)
chr6 (79-137)||(30905483-30905541)
chr6 (84-137)||(31411098-31411151)
chr6 (106-186)||(15288945-15289023)
chr6 (113-184)||(7233999-7234070)
chr6 (84-187)||(24256921-24257024)
chr6 (89-187)||(18904672-18904768)
chr6 (90-196)||(20696884-20696990)
chr6 (131-188)||(3037575-3037632)
chr6 (130-187)||(5134423-5134478)
chr6 (84-193)||(5288328-5288435)
chr6 (84-137)||(20858420-20858473)
chr6 (84-163)||(6143969-6144048)
chr6 (84-187)||(8309169-8309273)
chr6 (87-187)||(9438310-9438408)
chr6 (84-160)||(9491749-9491825)
chr6 (84-180)||(17347260-17347355)
chr6 (84-163)||(29284122-29284202)
[»] chr8 (32 HSPs)
chr8 (89-189)||(11900576-11900675)
chr8 (84-187)||(25470833-25470936)
chr8 (84-165)||(39432337-39432418)
chr8 (84-188)||(8740644-8740746)
chr8 (84-180)||(7345433-7345529)
chr8 (92-186)||(22847250-22847344)
chr8 (89-187)||(24074516-24074612)
chr8 (84-160)||(43874991-43875067)
chr8 (89-163)||(35301174-35301249)
chr8 (84-187)||(43468694-43468795)
chr8 (82-180)||(43554452-43554551)
chr8 (111-198)||(44070346-44070431)
chr8 (92-189)||(30500481-30500577)
chr8 (79-159)||(36633635-36633716)
chr8 (112-192)||(6325303-6325382)
chr8 (84-163)||(10292356-10292436)
chr8 (84-184)||(12560037-12560136)
chr8 (84-163)||(22426405-22426485)
chr8 (84-163)||(40329615-40329695)
chr8 (84-187)||(220349-220452)
chr8 (84-187)||(689504-689607)
chr8 (84-187)||(733972-734075)
chr8 (84-187)||(857868-857971)
chr8 (84-183)||(9524962-9525059)
chr8 (105-188)||(13702340-13702421)
chr8 (90-133)||(16611596-16611639)
chr8 (84-183)||(24608476-24608573)
chr8 (90-185)||(34073230-34073323)
chr8 (151-197)||(27821882-27821928)
chr8 (113-195)||(33570410-33570490)
chr8 (84-163)||(2696537-2696617)
chr8 (94-189)||(29653069-29653165)
[»] chr1 (55 HSPs)
chr1 (84-188)||(9769566-9769670)
chr1 (89-188)||(195054-195153)
chr1 (84-187)||(43020616-43020719)
chr1 (82-195)||(19866478-19866591)
chr1 (84-187)||(3341723-3341826)
chr1 (84-187)||(9768796-9768899)
chr1 (89-187)||(41677070-41677168)
chr1 (90-195)||(13941330-13941435)
chr1 (84-195)||(7015665-7015777)
chr1 (84-188)||(15774300-15774402)
chr1 (79-195)||(16182809-16182925)
chr1 (89-187)||(12553203-12553302)
chr1 (89-183)||(50575911-50576005)
chr1 (86-187)||(50199463-50199564)
chr1 (84-187)||(18179333-18179436)
chr1 (104-187)||(23973469-23973552)
chr1 (84-187)||(41998103-41998205)
chr1 (84-154)||(1580834-1580904)
chr1 (85-187)||(2903014-2903116)
chr1 (84-195)||(24168556-24168669)
chr1 (97-195)||(47355746-47355843)
chr1 (82-188)||(48565133-48565239)
chr1 (84-185)||(4354096-4354195)
chr1 (78-163)||(5684121-5684205)
chr1 (122-195)||(9410307-9410380)
chr1 (130-187)||(9976371-9976428)
chr1 (130-187)||(33844668-33844725)
chr1 (130-187)||(33949253-33949310)
chr1 (111-164)||(50327957-50328010)
chr1 (111-187)||(4616905-4616979)
chr1 (84-180)||(9931092-9931188)
chr1 (84-160)||(12073091-12073167)
chr1 (89-193)||(42908781-42908885)
chr1 (84-184)||(48260179-48260279)
chr1 (84-160)||(49251409-49251485)
chr1 (84-195)||(3797860-3797970)
chr1 (84-139)||(7182929-7182984)
chr1 (84-183)||(11238019-11238118)
chr1 (90-160)||(3569055-3569125)
chr1 (84-138)||(11802056-11802110)
chr1 (84-138)||(23758289-23758343)
chr1 (79-137)||(28354144-28354202)
chr1 (89-187)||(34560327-34560422)
chr1 (131-187)||(4611217-4611274)
chr1 (86-195)||(8904261-8904370)
chr1 (78-187)||(18646687-18646794)
chr1 (128-177)||(24889189-24889238)
chr1 (141-182)||(27654997-27655038)
chr1 (90-187)||(39433369-39433464)
chr1 (84-187)||(8364397-8364498)
chr1 (84-163)||(29491474-29491554)
chr1 (84-160)||(33694547-33694623)
chr1 (84-163)||(39238720-39238800)
chr1 (143-187)||(41182838-41182881)
chr1 (79-187)||(49606686-49606793)
[»] chr3 (45 HSPs)
chr3 (88-184)||(34407080-34407176)
chr3 (90-189)||(4045619-4045718)
chr3 (92-185)||(23025910-23026003)
chr3 (84-181)||(23237367-23237464)
chr3 (84-185)||(24160517-24160618)
chr3 (82-187)||(43566785-43566888)
chr3 (89-185)||(36277167-36277262)
chr3 (86-189)||(49146091-49146192)
chr3 (84-174)||(31108760-31108850)
chr3 (84-185)||(16999933-17000034)
chr3 (82-183)||(32080058-32080159)
chr3 (90-187)||(49299227-49299323)
chr3 (84-163)||(42823996-42824076)
chr3 (84-187)||(19137624-19137727)
chr3 (114-177)||(26365485-26365547)
chr3 (84-195)||(28951871-28951982)
chr3 (82-163)||(28226198-28226280)
chr3 (82-187)||(13616063-13616166)
chr3 (82-182)||(16985023-16985123)
chr3 (84-180)||(33533208-33533304)
chr3 (89-185)||(51017800-51017895)
chr3 (89-184)||(13539956-13540049)
chr3 (144-187)||(21248977-21249020)
chr3 (84-187)||(24130564-24130667)
chr3 (84-187)||(31680737-31680839)
chr3 (84-187)||(31917855-31917957)
chr3 (84-187)||(33206762-33206863)
chr3 (84-187)||(40160740-40160843)
chr3 (84-187)||(40786285-40786386)
chr3 (89-187)||(43774194-43774291)
chr3 (105-187)||(50724393-50724473)
chr3 (105-187)||(50788375-50788455)
chr3 (84-138)||(3461760-3461814)
chr3 (85-195)||(37707623-37707732)
chr3 (84-189)||(16006493-16006596)
chr3 (146-187)||(21142720-21142761)
chr3 (130-187)||(36256668-36256723)
chr3 (84-187)||(36331715-36331817)
chr3 (111-160)||(43897634-43897683)
chr3 (84-188)||(20623765-20623867)
chr3 (79-155)||(24890073-24890149)
chr3 (84-163)||(44976578-44976657)
chr3 (84-188)||(48173291-48173393)
chr3 (84-187)||(49639033-49639134)
chr3 (84-163)||(52030125-52030205)
[»] chr5 (39 HSPs)
chr5 (103-197)||(40384275-40384369)
chr5 (84-198)||(11246470-11246584)
chr5 (84-160)||(24653148-24653223)
chr5 (124-187)||(6291040-6291103)
chr5 (84-187)||(28537140-28537243)
chr5 (82-177)||(32252916-32253011)
chr5 (84-187)||(35813230-35813332)
chr5 (84-187)||(38040271-38040373)
chr5 (111-165)||(24651168-24651222)
chr5 (106-191)||(27278736-27278822)
chr5 (90-184)||(41405078-41405172)
chr5 (111-160)||(5891084-5891133)
chr5 (84-187)||(5156901-5157003)
chr5 (84-163)||(6447491-6447571)
chr5 (84-184)||(7147009-7147109)
chr5 (89-187)||(9963425-9963522)
chr5 (85-184)||(14487567-14487664)
chr5 (89-187)||(20186876-20186972)
chr5 (86-193)||(29144149-29144254)
chr5 (84-187)||(31556823-31556926)
chr5 (80-119)||(33756314-33756353)
chr5 (105-183)||(4666439-4666515)
chr5 (147-197)||(18405482-18405532)
chr5 (84-186)||(30119963-30120065)
chr5 (82-160)||(31934889-31934967)
chr5 (90-187)||(38426751-38426844)
chr5 (84-193)||(20945874-20945981)
chr5 (122-187)||(21360440-21360503)
chr5 (130-183)||(27006391-27006444)
chr5 (89-186)||(33599919-33600016)
chr5 (86-187)||(33729785-33729884)
chr5 (84-184)||(10106635-10106735)
chr5 (79-159)||(13754006-13754086)
chr5 (84-160)||(33800898-33800974)
chr5 (151-187)||(37986854-37986890)
chr5 (144-180)||(38977318-38977354)
chr5 (84-180)||(40250171-40250267)
chr5 (103-187)||(41539338-41539422)
chr5 (111-147)||(42885864-42885900)
[»] scaffold0002 (1 HSPs)
scaffold0002 (89-187)||(440409-440507)
[»] scaffold0011 (1 HSPs)
scaffold0011 (82-180)||(19389-19487)
[»] scaffold0054 (1 HSPs)
scaffold0054 (84-188)||(67166-67270)
[»] scaffold0045 (1 HSPs)
scaffold0045 (91-197)||(30875-30983)
[»] scaffold0343 (1 HSPs)
scaffold0343 (105-192)||(8586-8671)
[»] scaffold0168 (1 HSPs)
scaffold0168 (84-187)||(34020-34123)
[»] scaffold0013 (1 HSPs)
scaffold0013 (82-137)||(245493-245548)
[»] scaffold0009 (2 HSPs)
scaffold0009 (92-194)||(62726-62828)
scaffold0009 (84-163)||(108372-108452)
[»] scaffold0039 (1 HSPs)
scaffold0039 (151-187)||(25463-25499)


Alignment Details
Target: chr4 (Bit Score: 95; Significance: 1e-46; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 13 - 248
Target Start/End: Complemental strand, 11863314 - 11863077
Alignment:
Q  13 tactgatattctcaattgatannnnnnncatagattccatctatagaaagtatttctattctccttgtaaacataactcagttggcaggaacatgcacta 112  Q
    |||||||||||||||||||||       |||||||||||||||||||||||||||| |||  || | | | |||| |||| |||| ||| ||||||||||    
T  11863314 tactgatattctcaattgatatttttttcatagattccatctatagaaagtatttccattgcccctttgagcatagctcaattggtagggacatgcacta 11863215  T
Q  113 ttatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccactaaattactt--aacnnnnnnnnngta 210  Q
    ||||||| | ||  |||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||| |||||||  ||          |||    
T  11863214 ttatatgcagggactgaggttcgaacttcagacaccctacttattcaccttgataaaagtgaattctagctactagattacttaaaaaaaaaaaagagta 11863115  T
Q  211 tttctattgagatagtgccagacactaaatatgaacat 248  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  11863114 tttctattgagatagtgtcagacactaaatatgaacat 11863077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 187
Target Start/End: Complemental strand, 12585654 - 12585546
Alignment:
Q  79 gtaaacataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattc 178  Q
    ||||||||||||||||||||||| ||||||| | |||||||||||||  |  ||||||||  |  |||||  |||||||||  |||| ||||||||||||    
T  12585654 gtaaacataactcagttggcagggacatgcattgttatatgtaagggccggagttcgaaccccgaacacctcacttattcatcttgaaaaaggtgaattc 12585555  T
Q  179 tagccacta 187  Q
    |||||||||    
T  12585554 tagccacta 12585546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 188
Target Start/End: Original strand, 47416465 - 47416577
Alignment:
Q  76 cttgtaaacataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaa 175  Q
    ||||| |||||  ||||||||| ||||  ||| | ||||||||| | |||||| ||||||||  || ||||||| ||||||||||||||| |||||||||    
T  47416465 cttgtgaacatggctcagttggtaggataatggattattatatgcaggggttggggttcgaatctcggacaccccacttattcactttgaaaaaggtgaa 47416564  T
Q  176 ttctagccactaa 188  Q
    ||||| |||||||    
T  47416565 ttctaaccactaa 47416577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 49039535 - 49039432
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||||||||||| ||||||| | ||||||| | ||  || |||||||||  | ||||||| |||||||||| |||| |||||||||||||||||    
T  49039535 catagctcagttggcagggacatgcattgttatatgcagggactggggttcgaaccccggacaccccacttattcaccttgaaaaaggtgaattctagcc 49039436  T
Q  184 acta 187  Q
    ||||    
T  49039435 acta 49039432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 90 - 193
Target Start/End: Complemental strand, 6481668 - 6481565
Alignment:
Q  90 tcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccactaaa 189  Q
    |||||||||||| |||||||  |||||||| |  ||  ||||||||||| |||||| ||| |||||||||| || | || |||||||||||| |||||||    
T  6481668 tcagttggcagggacatgcatgattatatgcagaggccgaggttcgaacctcagacgccccacttattcaccttaaaaatggtgaattctagtcactaaa 6481569  T
Q  190 ttac 193  Q
    ||||    
T  6481568 ttac 6481565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 20610744 - 20610847
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||||||||||| ||||||| | ||||||| | |||  | |||||||||| | |||| || |||||||||| || | |||||||||||||||||    
T  20610744 catagctcagttggcagggacatgcattgttatatgcaggggccggggttcgaactccggacatcccacttattcaccttaaaaaaggtgaattctagcc 20610843  T
Q  184 acta 187  Q
    ||||    
T  20610844 acta 20610847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 33359822 - 33359925
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| |||||||| || | |||| || | ||||||| |||||| |||||||||||    ||||||| |||||||||| |||| |||||||||||||||||    
T  33359822 catagctcagttgacatggacattcattgttatatgcaagggtcgaggttcgaaccctggacaccccacttattcaccttgaaaaaggtgaattctagcc 33359921  T
Q  184 acta 187  Q
    ||||    
T  33359922 acta 33359925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 41492588 - 41492486
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||||||||||| ||||||| ||||||||| | |||  | ||||||||| |  ||||||| ||||||| || |||| |||||||||||||||||    
T  41492588 catagctcagttggcagggacatgcattattatatgcaggggccggggttcgaacctg-gacaccccacttatttaccttgaaaaaggtgaattctagcc 41492490  T
Q  184 acta 187  Q
    ||||    
T  41492489 acta 41492486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 21023441 - 21023339
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| |||||||||||| |||||||| | ||||||    |||||| |||||||||  | ||||||| |||||||||| |||| |||||||||||||| ||    
T  21023441 catagctcagttggcagaaacatgcattgttatatccg-gggttggggttcgaacccccgacaccccacttattcaccttgaaaaaggtgaattctaacc 21023343  T
Q  184 acta 187  Q
    ||||    
T  21023342 acta 21023339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 158
Target Start/End: Complemental strand, 23935121 - 23935042
Alignment:
Q  79 gtaaacataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattc 158  Q
    |||||||||  |||||||||||| |||| || |||| ||| |||| ||| |||||||||| |||||||||| ||||||||    
T  23935121 gtaaacatagttcagttggcagggacatacattattgtatataagagttaaggttcgaacctcagacaccccacttattc 23935042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 54854269 - 54854166
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||||||||||| |||||||  |||||||| | ||| || |||||||||  | |||| |  |||||||||| |||| ||| |||||||||||||    
T  54854269 catagctcagttggcagggacatgcataattatatgcaggggctggggttcgaaccccggacatcacacttattcaccttgaaaaaagtgaattctagcc 54854170  T
Q  184 acta 187  Q
    ||||    
T  54854169 acta 54854166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 188
Target Start/End: Original strand, 6202610 - 6202712
Alignment:
Q  86 taactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccac 185  Q
    |||||||||||||||  ||||||  | || |||||| ||| |  |||||||||  | |||||||||||||||||  |||| ||||||||||||||| |||    
T  6202610 taactcagttggcagcgacatgctttgttttatgtaggggctagggttcgaaccccggacaccctacttattcatcttgaaaaaggtgaattctagtcac 6202709  T
Q  186 taa 188  Q
    |||    
T  6202710 taa 6202712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 163
Target Start/End: Complemental strand, 33708833 - 33708800
Alignment:
Q  130 ggttcgaacttcagacaccctacttattcacttt 163  Q
    ||||||||||||||||||||||||||||||||||    
T  33708833 ggttcgaacttcagacaccctacttattcacttt 33708800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 186
Target Start/End: Complemental strand, 34773752 - 34773673
Alignment:
Q  105 atgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccact 186  Q
    ||||| ||||||||| | ||| ||||||||||||  | ||||||| ||||||||||||| || |||||||||||||||||||    
T  34773752 atgcattattatatgcaggggctgaggttcgaaccccggacaccccacttattcacttt-at-aaggtgaattctagccact 34773673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 189
Target Start/End: Complemental strand, 37997932 - 37997831
Alignment:
Q  88 actcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    |||||||||||||| |||| || | ||||||| | ||  || |||||||||  ||||||||| |||||||||| || | || | ||||||||||||||||    
T  37997932 actcagttggcagggacattcattgttatatgcagggtctggggttcgaaccccagacaccccacttattcaccttaaaaaggatgaattctagccacta 37997833  T
Q  188 aa 189  Q
    ||    
T  37997832 aa 37997831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 157
Target Start/End: Original strand, 42432014 - 42432086
Alignment:
Q  85 ataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttatt 157  Q
    ||||||||||||||||| ||||||| | ||||||| | || ||| |||||||||| |  ||||||||||||||    
T  42432014 ataactcagttggcagggacatgcattgttatatgcagggattggggttcgaactccgaacaccctacttatt 42432086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 49319398 - 49319502
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttg-ataaaggtgaattctagc 182  Q
    |||| ||||||||||| | ||||||| ||||||||| | |||| | ||||| |||  | ||||||| |||||||||| ||| | ||||||||||| ||||    
T  49319398 catagctcagttggcatggacatgcattattatatgcaggggtcggggttccaaccccggacaccccacttattcaccttgaaaaaaggtgaattatagc 49319497  T
Q  183 cacta 187  Q
    |||||    
T  49319498 cacta 49319502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 20753215 - 20753114
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||||||| ||||| ||||| ||||||||||| |||  | |||||||||  | ||||||  |||||||||| || || ||||||||||||||||    
T  20753215 catagctcagttggtaggaaaatgcattattatatgtaggggccggggttcgaaccccggacaccacacttattcacctt-at-aaggtgaattctagcc 20753118  T
Q  184 acta 187  Q
    ||||    
T  20753117 acta 20753114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 185
Target Start/End: Original strand, 39449403 - 39449505
Alignment:
Q  82 aacataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctag 181  Q
    |||||||||||| ||||||| ||||||| |||||||||| |||| |||||| |||||  || | |||  |||||||||| || | ||| ||||||||||     
T  39449403 aacataactcagctggcagggacatgcattattatatgt-agggctgaggtacgaaccccaaatacctcacttattcaccttaaaaaatgtgaattctaa 39449501  T
Q  182 ccac 185  Q
    ||||    
T  39449502 ccac 39449505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 52031216 - 52031291
Alignment:
Q  89 ctcagttggcaggaaca-tgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcacttt 163  Q
    ||||||||||||||||| |||| || |||||| | |||| | |||||||||  ||||||||| |||||||||||||    
T  52031216 ctcagttggcaggaacaatgcattagtatatgcaggggtcggggttcgaaccccagacaccccacttattcacttt 52031291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 187
Target Start/End: Complemental strand, 8241206 - 8241168
Alignment:
Q  149 ctacttattcactttgataaaggtgaattctagccacta 187  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  8241206 ctacttattcactttgaaaaagctgaattctagccacta 8241168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 187
Target Start/End: Original strand, 20166326 - 20166424
Alignment:
Q  89 ctcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    ||||||||||||| ||||||| | ||||||| | |||  |||||||||||  |||| |||| |||||||| | |||| ||| | |||||||||| ||||    
T  20166326 ctcagttggcagggacatgcattgttatatgcaggggccgaggttcgaaccccagataccccacttattctccttgaaaaaagagaattctagctacta 20166424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 186
Target Start/End: Original strand, 54264933 - 54265035
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||| |||||| |||||||| | ||||||||| ||||   ||||| ||| ||  |||||  |||||||||| |||| |||| ||||||||||||    
T  54264933 catagctcagctggcagaaacatgcattgttatatgtaggggtcagggttcaaacctcgaacacctcacttattcaccttgaaaaagatgaattctagcc 54265032  T
Q  184 act 186  Q
    |||    
T  54265033 act 54265035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 82 - 187
Target Start/End: Complemental strand, 3544524 - 3544421
Alignment:
Q  82 aacataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctag 181  Q
    |||||| ||||||||| ||||  ||||| ||||||||| || ||  | |||||||||  | ||| |||||||||||||| || || ||||||||||||||    
T  3544524 aacatagctcagttggtaggacaatgcattattatatgcaaaggccggggttcgaaccccggactccctacttattcacatt-at-aaggtgaattctag 3544427  T
Q  182 ccacta 187  Q
    ||||||    
T  3544426 ccacta 3544421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 165
Target Start/End: Original strand, 29785155 - 29785236
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttga 165  Q
    |||| ||||||||||||| |||| |||| | ||||||| ||| || |||||||||  | ||||||| |||||||||| ||||    
T  29785155 catagctcagttggcagggacatacactgtaatatgtaggggctggggttcgaaccccggacaccccacttattcaccttga 29785236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 52757335 - 52757275
Alignment:
Q  89 ctcagttggcaggaacat-gcactattatatgtaagggttgaggttcgaacttcagacaccc 149  Q
    ||||||||||||||| || ||| ||||||||| | |||||| ||||||||||||||||||||    
T  52757335 ctcagttggcaggaatattgca-tattatatgcaggggttggggttcgaacttcagacaccc 52757275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 55677156 - 55677221
Alignment:
Q  130 ggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccactaaattactt 195  Q
    |||||||||| | ||||| | ||||||||||||||| | | |||||||||| |||||||| |||||    
T  55677156 ggttcgaactccggacactccacttattcactttgaaataagtgaattctaaccactaaactactt 55677221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 187
Target Start/End: Original strand, 3465583 - 3465689
Alignment:
Q  79 gtaaacataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattc 178  Q
    |||| |||||||||||||| ||||  ||||| ||||||||| | |||  |  ||||||||  | ||||||| |||||||||| || || |||||||||||    
T  3465583 gtaagcataactcagttggtaggacaatgcattattatatgcaggggccggagttcgaaccccggacaccccacttattcacctt-at-aaggtgaattc 3465680  T
Q  179 tagccacta 187  Q
    |||||||||    
T  3465681 tagccacta 3465689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 9172461 - 9172385
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcac 160  Q
    |||||||||||||| ||||  ||||| ||||||||| | |||| | ||||||||| ||  ||||||||| |||||||    
T  9172461 cataactcagttggtaggacaatgcattattatatgcaggggtcggggttcgaacctcgaacaccctacgtattcac 9172385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 188
Target Start/End: Original strand, 32885693 - 32885795
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||||||| ||||  ||||| ||||||||| | |||| |  |||||||| || ||||||| |||||||||| || |||| ||||||||||| ||    
T  32885693 catagctcagttggtaggacaatgcattattatatgcaggggtcggagttcgaacctcggacaccccacttattcacctt-ataa-ggtgaattctatcc 32885790  T
Q  184 actaa 188  Q
    |||||    
T  32885791 actaa 32885795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 187
Target Start/End: Original strand, 33076554 - 33076637
Alignment:
Q  103 acatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    ||||||| ||||||||| | |||| | |||||||||  | |||||||||||||||||| || | |||| |||||| |||||||||    
T  33076554 acatgcattattatatgcaggggtcggggttcgaaccccggacaccctacttattcacctt-aaaaagatgaattatagccacta 33076637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 184
Target Start/End: Original strand, 36045835 - 36045935
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| |||| ||| |||| ||||||| | ||||||| | |||||||| |||||||| | ||||||  ||||| |||  |||| ||||||||||||| |||    
T  36045835 catagctcaattgacagggacatgcattgttatatgcaggggttgagattcgaactccggacacctcacttagtcatattgaaaaaggtgaattctggcc 36045934  T
Q  184 a 184  Q
    |    
T  36045935 a 36045935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 36257699 - 36257800
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||||||||||| ||| ||| |||| |||| | |||  | |||||||||  | ||||||| |||||||||||||   ||| |||||||||||||    
T  36257699 catagctcagttggcagggacaagcagtattgtatgcaggggccggggttcgaaccccggacaccccacttattcacttt--aaaaagtgaattctagcc 36257796  T
Q  184 acta 187  Q
    ||||    
T  36257797 acta 36257800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 56546539 - 56546438
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| |||| |||| ||||  ||||| ||||||||| | |||  | |||||||||  ||||||||| |||||||||||||   ||| |||||||||||||    
T  56546539 catagctcaattggtaggacaatgcattattatatgcaggggccggggttcgaaccacagacaccccacttattcacttt--aaaaagtgaattctagcc 56546442  T
Q  184 acta 187  Q
    ||||    
T  56546441 acta 56546438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 5e-31; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 79 - 195
Target Start/End: Original strand, 35498398 - 35498513
Alignment:
Q  79 gtaaacataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattc 178  Q
    |||| |||||||||||||||||| ||||||| ||||||||| | |||||| ||||| |||||| ||||||| ||||||||||||||| ||||||||||||    
T  35498398 gtaagcataactcagttggcagggacatgcattattatatgcaggggttg-ggttcaaacttcggacaccccacttattcactttgaaaaaggtgaattc 35498496  T
Q  179 tagccactaaattactt 195  Q
    ||||||||| |||||||    
T  35498497 tagccactatattactt 35498513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 79 - 195
Target Start/End: Complemental strand, 24579381 - 24579265
Alignment:
Q  79 gtaaacataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattc 178  Q
    |||| |||| |||||||  |||||||||||| ||||||||| | ||| |||| |||||||  ||||||||| |||||||||| |||| ||||||||||||    
T  24579381 gtaagcatatctcagtttacaggaacatgcattattatatgcaggggatgagattcgaaccccagacaccccacttattcaccttgaaaaaggtgaattc 24579282  T
Q  179 tagccactaaattactt 195  Q
    || |||||||| |||||    
T  24579281 tatccactaaactactt 24579265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 82 - 180
Target Start/End: Original strand, 16814700 - 16814798
Alignment:
Q  82 aacataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattcta 180  Q
    |||||| ||||||||||| ||||||||| ||||||||||| |||| | |||||||||  ||||||| | ||||||||||||||| ||| ||||||||||    
T  16814700 aacatagctcagttggcaagaacatgcattattatatgtaggggtcggggttcgaaccccagacactccacttattcactttgaaaaatgtgaattcta 16814798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 84 - 195
Target Start/End: Complemental strand, 3246576 - 3246468
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| |||||||| |||| ||||||| | |||||||   ||| ||||||||||||| |  |||||||||||||| ||||||| |||||||||||||| ||    
T  3246576 catagctcagttgacagggacatgcattgttatatg---gggctgaggttcgaactccgaacaccctacttatttactttgaaaaaggtgaattctaacc 3246480  T
Q  184 actaaattactt 195  Q
    |||| |||||||    
T  3246479 actagattactt 3246468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 34693858 - 34693757
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    ||||||||| ||| |||| |||||||  |||||||| | ||||||| ||||||| |||||||| || |||||||||| ||||  ||||||||||||||||    
T  34693858 cataactcacttgacagggacatgcataattatatgcaggggttgaagttcgaatttcagacatcccacttattcaccttga--aaggtgaattctagcc 34693761  T
Q  184 acta 187  Q
    ||||    
T  34693760 acta 34693757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 1513492 - 1513594
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    ||||| |||||||||||| ||||||| | ||||||||| ||||||||||||||||  |  |||||| |||||||||| |||| ||| ||||||| |||||    
T  1513492 cataaatcagttggcagggacatgcattgttatatgtaggggttgaggttcgaacaccgaacaccccacttattcaccttga-aaatgtgaattttagcc 1513590  T
Q  184 acta 187  Q
    ||||    
T  1513591 acta 1513594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 44409206 - 44409308
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||||||||||| ||||| ||||||| ||||||||| |||||| | |||||||||  |  |||||| |||||||||| |||| |||||||||||||| ||    
T  44409206 cataactcagttagcagggacatgcattattatatgcaagggtcggggttcgaac-ccgaacaccccacttattcaccttgaaaaaggtgaattctaacc 44409304  T
Q  184 acta 187  Q
    ||||    
T  44409305 acta 44409308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 195
Target Start/End: Original strand, 35195843 - 35195959
Alignment:
Q  79 gtaaacataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattc 178  Q
    |||| |||| ||||||||||||| ||||||| ||||||||| | |||  | |||||||||  |  |||||| | |||||||| |||| |||||||| |||    
T  35195843 gtaagcatagctcagttggcagggacatgcattattatatgcaggggccggggttcgaaccccgaacaccccatttattcaccttgaaaaaggtgacttc 35195942  T
Q  179 tagccactaaattactt 195  Q
    ||| |||||||||||||    
T  35195943 tagtcactaaattactt 35195959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 84 - 195
Target Start/End: Original strand, 43635593 - 43635704
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    ||||||||||||||||| |||||||| | ||||||| |  ||| | |||||||||  | ||||||| |||||||||| ||   || ||||||||||||||    
T  43635593 cataactcagttggcagaaacatgcattgttatatgcagcggtcggggttcgaaccccggacaccccacttattcaccttacaaagggtgaattctagcc 43635692  T
Q  184 actaaattactt 195  Q
    |||||| |||||    
T  43635693 actaaactactt 43635704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 187
Target Start/End: Complemental strand, 25711220 - 25711119
Alignment:
Q  85 ataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcca 184  Q
    ||||||||||||  ||||  ||||| ||||||||||| |||  | ||||||||| || ||||||| ||||||||||||| ||||| |||||||||| |||    
T  25711220 ataactcagttgataggataatgcattattatatgtaggggccggggttcgaacctcggacaccccacttattcacttt-ataaatgtgaattctatcca 25711122  T
Q  185 cta 187  Q
    |||    
T  25711121 cta 25711119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 187
Target Start/End: Complemental strand, 27726461 - 27726356
Alignment:
Q  82 aacataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctag 181  Q
    |||||| ||||||||||||| ||||||| ||||||| | |  ||  | ||||||||| || |||||||| ||||||| |||||  ||||||||||||||     
T  27726461 aacatagctcagttggcagggacatgcattattataagcagtggccggggttcgaacctcggacaccctgcttattcgctttggaaaaggtgaattctaa 27726362  T
Q  182 ccacta 187  Q
    ||||||    
T  27726361 ccacta 27726356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 187
Target Start/End: Complemental strand, 33236328 - 33236254
Alignment:
Q  113 ttatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    ||||||| | |||||| |||||||||  ||||||||||||||||||||||| | ||  |||||||||| ||||||    
T  33236328 ttatatgcaggggttggggttcgaacaacagacaccctacttattcactttaaaaattgtgaattctaaccacta 33236254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 26734303 - 26734258
Alignment:
Q  142 agacaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    |||||||| |||||||||| |||| |||||||||||||||||||||    
T  26734303 agacaccccacttattcaccttgaaaaaggtgaattctagccacta 26734258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 189
Target Start/End: Complemental strand, 43712403 - 43712298
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||||||||||||| ||| ||||||| | ||||||  | |||| | ||||||||| || || |||| |||||| | | |||| ||||| |||||||||||    
T  43712403 cataactcagttggtagggacatgcattgttatatacaggggtcggggttcgaacctcggataccccacttatcctccttgaaaaaggagaattctagcc 43712304  T
Q  184 actaaa 189  Q
    ||||||    
T  43712303 actaaa 43712298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 185
Target Start/End: Original strand, 47552218 - 47552317
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||||||| ||||  ||||| ||||||||| |||||  | |||||||||  | |||||||||||||||||| || || ||||||||||||||||    
T  47552218 catagctcagttggtaggacaatgcattattatatgcaagggccggggttcgaaccccggacaccctacttattcacctt-at-aaggtgaattctagcc 47552315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 186
Target Start/End: Original strand, 7908713 - 7908814
Alignment:
Q  82 aacataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctag 181  Q
    |||||| | ||||||| |||| |||||| ||||||||| |  || ||||||||||||  || ||||||||||||||||| || || ||||||||||||||    
T  7908713 aacatagcacagttggtagga-catgcattattatatgcagaggctgaggttcgaaccccaaacaccctacttattcacctt-at-aaggtgaattctag 7908809  T
Q  182 ccact 186  Q
    |||||    
T  7908810 ccact 7908814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 192
Target Start/End: Original strand, 20947787 - 20947872
Alignment:
Q  105 atgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccactaaatta 192  Q
    ||||| ||||||||| | |||||  ||||||||||||||||| |  |||||||||||||   ||| ||||||||||||||||| ||||    
T  20947787 atgcaatattatatgcaggggttagggttcgaacttcagacatctcacttattcacttt--aaaaagtgaattctagccactagatta 20947872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 189
Target Start/End: Original strand, 23799306 - 23799410
Alignment:
Q  85 ataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcca 184  Q
    ||||||||||||||||  ||||||| | ||||||| | |||| | | ||||||| || ||||||| |||||||| |||| | |||||| |||||||  ||    
T  23799306 ataactcagttggcagagacatgcattgttatatgcaggggtcgggattcgaacctcggacaccccacttattctctttaaaaaaggttaattctataca 23799405  T
Q  185 ctaaa 189  Q
    |||||    
T  23799406 ctaaa 23799410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 163
Target Start/End: Complemental strand, 41417366 - 41417286
Alignment:
Q  84 cataactcagttggcaggaaca-tgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcacttt 163  Q
    |||| ||||||||||||||||| ||||  |||||||| | |||| | |||||||||  ||||||||| |||||||||||||    
T  41417366 catagctcagttggcaggaacagtgcatcattatatgcaggggtcggggttcgaaccccagacaccccacttattcacttt 41417286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 184
Target Start/End: Original strand, 2366363 - 2366460
Alignment:
Q  85 ataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcca 184  Q
    ||||||||||||  ||||  ||||| ||||||||| | |||| | ||||||||||  |||||||| |||||||||| || || |||||||||||||||||    
T  2366363 ataactcagttgataggacaatgcattattatatgcaggggtcggggttcgaactctagacaccccacttattcacctt-at-aaggtgaattctagcca 2366460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 195
Target Start/End: Complemental strand, 7392396 - 7392285
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| |||| |||||||||||||||| | ||||||| |  ||||| |||| ||||  |  |||||| |||||||||| |||| |||  |||||| |||||    
T  7392396 catagctcaattggcaggaacatgcattgttatatgcagaggttggggtttgaaccccgaacaccccacttattcaccttgaaaaatatgaattatagcc 7392297  T
Q  184 actaaattactt 195  Q
    |||||| |||||    
T  7392296 actaaactactt 7392285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 10020559 - 10020456
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| |||||||| |||| ||||||| | ||||||| | |||||| |||||||||  |  ||| || |||||||||  |||| |||||||||||||| ||    
T  10020559 catagctcagttgacagggacatgcattgttatatgcaggggttggggttcgaaccccgaacaacccacttattcatcttgaaaaaggtgaattctaccc 10020460  T
Q  184 acta 187  Q
    ||||    
T  10020459 acta 10020456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 188
Target Start/End: Complemental strand, 29710185 - 29710089
Alignment:
Q  89 ctcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccactaa 188  Q
    ||||||||| ||||  ||||| ||||||||||| ||| |||||||||||||  |||||| | ||||||||| | | || |||||||||||||||||||||    
T  29710185 ctcagttggtaggacaatgcattattatatgta-gggctgaggttcgaactctagacactccacttattca-tcttat-aaggtgaattctagccactaa 29710089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 154
Target Start/End: Complemental strand, 32250404 - 32250361
Alignment:
Q  111 tattatatgtaagggttgaggttcgaacttcagacaccctactt 154  Q
    |||||||| ||||||||||||||||||| | |||||||||||||    
T  32250404 tattatatataagggttgaggttcgaaccttagacaccctactt 32250361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 37917397 - 37917500
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||||||| |||||||||||  |||||||| | |||||| ||||| |||   | |||||| ||||||||||||||| |||  |||||| ||| |    
T  37917397 catagctcagttggtaggaacatgcataattatatgcaggggttggggttcaaaccctaaacaccccacttattcactttgaaaaaaatgaattatagtc 37917496  T
Q  184 acta 187  Q
    ||||    
T  37917497 acta 37917500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 158
Target Start/End: Complemental strand, 924382 - 924308
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattc 158  Q
    |||| ||||||||| ||||   |||| ||||||||||| |||||| |||||||||  ||||||||| ||||||||    
T  924382 catagctcagttggtaggatagtgcattattatatgtaggggttggggttcgaaccccagacaccccacttattc 924308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 187
Target Start/End: Complemental strand, 32309229 - 32309135
Alignment:
Q  93 gttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    ||||||||| ||||||| | ||||||| | |||| |  |||||||  |||||||||| | |||||||| || | ||| |||||||||||||||||    
T  32309229 gttggcagggacatgcattgttatatgcaggggtcggagttcgaatctcagacaccccagttattcaccttaaaaaatgtgaattctagccacta 32309135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 163
Target Start/End: Complemental strand, 41507812 - 41507730
Alignment:
Q  82 aacataactcagttggcaggaac-atgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcacttt 163  Q
    |||||||||||||||| |||||| ||||| | |||||| ||||||| |  |||||||| ||| |||||| | |||||||||||    
T  41507812 aacataactcagttggtaggaacaatgcattgttatatataagggtcggagttcgaacctcaaacaccccatttattcacttt 41507730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 181
Target Start/End: Original strand, 47514210 - 47514305
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctag 181  Q
    |||| ||||||||| ||||||||||||||||||  ||| | |  | ||||| |||||||||||||  |||||||||| |||| |||  ||||||||||    
T  47514210 catagctcagttggtaggaacatgcactattat--gtaggagccggggttcaaacttcagacacctcacttattcaccttgaaaaatctgaattctag 47514305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 15716720 - 15716671
Alignment:
Q  111 tattatatgtaagggttgaggttcgaacttcagacaccctacttattcac 160  Q
    ||||||||| |||||| | |||||||||||| ||||||| ||||||||||    
T  15716720 tattatatgcaagggtcggggttcgaacttcggacaccccacttattcac 15716671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 35368402 - 35368501
Alignment:
Q  85 ataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcca 184  Q
    ||||||||||||| ||||   |||| |||||||| || ||| || |||||||||| | ||||||| | |||||||| || || |||||||||||||||||    
T  35368402 ataactcagttggtaggacattgcattattatatttaggggctgtggttcgaactccggacaccccatttattcacctt-at-aaggtgaattctagcca 35368499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 82 - 119
Target Start/End: Original strand, 43209404 - 43209441
Alignment:
Q  82 aacataactcagttggcaggaacatgcactattatatg 119  Q
    |||||||||||||||||||||||||||| | |||||||    
T  43209404 aacataactcagttggcaggaacatgcattgttatatg 43209441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 1649216 - 1649260
Alignment:
Q  143 gacaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    ||||||| |||||||||| |||| || ||||||||||||||||||    
T  1649216 gacaccccacttattcaccttgaaaatggtgaattctagccacta 1649260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 14967724 - 14967660
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacacc 148  Q
    |||||||||||||| ||||  ||||| ||||||||||| |||| | |||| |||| |||||||||    
T  14967724 cataactcagttggtaggacaatgcattattatatgtaggggtcggggtttgaacctcagacacc 14967660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 15397200 - 15397136
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacacc 148  Q
    |||||||||||||| ||||  ||||| ||||||||||| |||| | |||| |||| |||||||||    
T  15397200 cataactcagttggtaggacaatgcattattatatgtaggggtcggggtttgaacctcagacacc 15397136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 163
Target Start/End: Original strand, 19126741 - 19126821
Alignment:
Q  84 cataactcagttggcaggaaca-tgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcacttt 163  Q
    |||| ||||||||| ||||||| |||| ||||||||  | ||| ||||||||||||  | ||||||| |||||||||||||    
T  19126741 catagctcagttggtaggaacaatgcattattatatacaggggctgaggttcgaaccccggacaccccacttattcacttt 19126821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 193
Target Start/End: Original strand, 30152751 - 30152853
Alignment:
Q  89 ctcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccactaa 188  Q
    ||||||||| ||||  ||||| |||||||| || |||| | |||||||||  |  |||||| |||||||||| || |||| | |||||||||||||||||    
T  30152751 ctcagttggtaggacaatgcattattatatataggggtcggggttcgaaccccgaacaccccacttattcacctt-ataa-gatgaattctagccactaa 30152848  T
Q  189 attac 193  Q
    |||||    
T  30152849 attac 30152853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 163
Target Start/End: Complemental strand, 31475931 - 31475851
Alignment:
Q  84 cataactcagttggcaggaacat-gcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcacttt 163  Q
    |||| ||||||||||||| |||| ||| ||||||||| | ||| || |||||||||  | ||||||| |||||||||||||    
T  31475931 catagctcagttggcagggacattgcattattatatgcaggggctggggttcgaacccctgacaccccacttattcacttt 31475851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 180
Target Start/End: Complemental strand, 42976646 - 42976594
Alignment:
Q  128 gaggttcgaacttcagacaccctacttattcactttgataaaggtgaattcta 180  Q
    |||||||||||| | ||||| | ||||||||||||| | ||||||||||||||    
T  42976646 gaggttcgaactacggacactccacttattcactttaaaaaaggtgaattcta 42976594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 1e-25; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 39334971 - 39334868
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||||||||||||||||| ||||||| ||||||||  | ||| || |||||||||| |||||| || ||||||||||||||| |||||||||||||||||    
T  39334971 cataactcagttggcagggacatgcattattatatacaggggctggggttcgaactccagacatcccacttattcactttgaaaaaggtgaattctagcc 39334872  T
Q  184 acta 187  Q
    ||||    
T  39334871 acta 39334868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 34107279 - 34107382
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||||||||||| ||||| |  |||||||| | ||||||||||||||||| ||||||||| |||||||||| |||| ||| |||||||||||||    
T  34107279 catagctcagttggcagggacatgtataattatatgcaggggttgaggttcgaactccagacaccccacttattcaccttgaaaaatgtgaattctagcc 34107378  T
Q  184 acta 187  Q
    ||||    
T  34107379 acta 34107382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 84 - 185
Target Start/End: Original strand, 22355088 - 22355189
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||||||||| | ||||||| | |||| || | |||||||| |||||||| ||||||||| |||||||||| |||  |||||||||||||||||    
T  22355088 catagctcagttggcaaggacatgcattgttatgtgcaggggttgagtttcgaactccagacaccccacttattcaccttgcaaaaggtgaattctagcc 22355187  T
Q  184 ac 185  Q
    ||    
T  22355188 ac 22355189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 3179329 - 3179430
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||||||||||||| || |  ||||| ||||||||| | |||| ||||||||||| |||||||||| |||||||||| || || ||||||||||||||||    
T  3179329 cataactcagttggtagaacaatgcattattatatgcaggggtcgaggttcgaacctcagacaccccacttattcacctt-at-aaggtgaattctagcc 3179426  T
Q  184 acta 187  Q
    ||||    
T  3179427 acta 3179430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 89 - 188
Target Start/End: Complemental strand, 14307779 - 14307680
Alignment:
Q  89 ctcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccactaa 188  Q
    ||||||||| ||| ||||||| | ||||||| | |||| |||||||||||  |  |||||| ||||||||||||| | ||| ||||||||||||||||||    
T  14307779 ctcagttggtagggacatgcattgttatatgcaggggtcgaggttcgaaccccgaacaccccacttattcactttaaaaaaagtgaattctagccactaa 14307680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 36190088 - 36190138
Alignment:
Q  113 ttatatgtaagggttgaggttcgaacttcagacaccctacttattcacttt 163  Q
    |||||||||||||| ||||||||||| |||||||||| |||||||||||||    
T  36190088 ttatatgtaagggtcgaggttcgaacctcagacaccccacttattcacttt 36190138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 181
Target Start/End: Original strand, 37123210 - 37123288
Alignment:
Q  103 acatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctag 181  Q
    ||||||| ||||||||| | |||| ||| |||||||| | ||||||||||||||||||||| | |||| ||||||||||    
T  37123210 acatgcattattatatgcaggggtcgagattcgaactccggacaccctacttattcactttaaaaaagatgaattctag 37123288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 187
Target Start/End: Original strand, 1244580 - 1244677
Alignment:
Q  90 tcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    |||||||||||| |||| || |  |||||| | |||| | |||||||||  | ||||||| |||||||||| |||| |||||||||||||||||||||    
T  1244580 tcagttggcagggacatacattgctatatgcaggggtgggggttcgaaccccggacaccccacttattcaccttgaaaaaggtgaattctagccacta 1244677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 22014715 - 22014646
Alignment:
Q  111 tattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattcta 180  Q
    ||||||||||| ||||||||||||||||  ||||||||| ||||||| || |||| ||| ||||||||||    
T  22014715 tattatatgtaggggttgaggttcgaaccccagacaccccacttatttaccttgaaaaatgtgaattcta 22014646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 186
Target Start/End: Original strand, 25071220 - 25071317
Alignment:
Q  89 ctcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccact 186  Q
    |||| |||||||| ||||||| ||||||||| ||||||   |||||||||  | ||||||  ||||| || |||||| ||||||||||||||||||||    
T  25071220 ctcaattggcagggacatgcattattatatggaagggtcagggttcgaaccacggacaccacacttactcgctttgaaaaaggtgaattctagccact 25071317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 85 - 185
Target Start/End: Complemental strand, 16028197 - 16028099
Alignment:
Q  85 ataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcca 184  Q
    ||||||||||||| ||||  ||||| ||||||||| |  ||| | |||||||||| |||||| || ||||||||||||| || |||||||||||||||||    
T  16028197 ataactcagttggtaggacaatgcattattatatgcagtggtcggggttcgaactccagacatcccacttattcacttt-at-aaggtgaattctagcca 16028100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 187
Target Start/End: Complemental strand, 20942192 - 20942096
Alignment:
Q  91 cagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    ||||||||||| |||||||  |||||||||| ||| ||  ||||||||  ||||||||  |||||||||| |||| ||| ||||||||||| |||||    
T  20942192 cagttggcagggacatgcataattatatgtaggggatggagttcgaaccccagacacctcacttattcaccttgaaaaaagtgaattctagtcacta 20942096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 187
Target Start/End: Original strand, 12206511 - 12206606
Alignment:
Q  92 agttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    ||||||||||||||| || ||||||||  | |||| | |||||||||  |  ||||||  ||||||||| |||| |||||||||||||||||||||    
T  12206511 agttggcaggaacatacattattatattcaggggtcggggttcgaaccccgaacaccccgcttattcaccttgaaaaaggtgaattctagccacta 12206606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 195
Target Start/End: Original strand, 6282245 - 6282351
Alignment:
Q  89 ctcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccactaa 188  Q
    ||||||||  ||| ||| ||| ||||||||| |||||  | |||| ||||  || |||||  ||||||||||||||| ||| |||||||||| |||||||    
T  6282245 ctcagttgttagggacacgcattattatatgcaagggacggggtttgaaccccaaacacctcacttattcactttgaaaaatgtgaattctaaccactaa 6282344  T
Q  189 attactt 195  Q
    |||||||    
T  6282345 attactt 6282351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 84 - 186
Target Start/End: Complemental strand, 30474285 - 30474185
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||||||| ||||  ||||| ||||||||| | |||  |||||||||||  ||||||||| |||||||||| || || ||||||||||||||||    
T  30474285 catagctcagttggtaggacaatgcattattatatgcaggggccgaggttcgaaccccagacaccccacttattcacctt-at-aaggtgaattctagcc 30474188  T
Q  184 act 186  Q
    |||    
T  30474187 act 30474185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 183
Target Start/End: Original strand, 32288386 - 32288480
Alignment:
Q  89 ctcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||||||| ||| |||||||| ||||||||||| || | | ||||||||| || ||||||| |||||||||| |||| |||  | ||||||||||    
T  32288386 ctcagttgacagaaacatgcattattatatgtagggatcggggttcgaacctcggacaccccacttattcaccttgaaaaaaataaattctagcc 32288480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 32677383 - 32677437
Alignment:
Q  133 tcgaacttcagacaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    ||||| ||||||||||| ||||||||||||||| ||||||||||| ||| |||||    
T  32677383 tcgaatttcagacaccccacttattcactttgaaaaaggtgaattatagtcacta 32677437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 188
Target Start/End: Complemental strand, 4529834 - 4529749
Alignment:
Q  103 acatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccactaa 188  Q
    ||||||| ||||||||| | |||| |  ||||||||| |  |||||| ||||||||||||||| ||||||||||| |||| |||||    
T  4529834 acatgcattattatatgcaggggtcggagttcgaactccgaacaccccacttattcactttgaaaaaggtgaattttagcaactaa 4529749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 189
Target Start/End: Original strand, 10262744 - 10262847
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||||||||||||| ||||  ||||| ||||||||| | |||| | |||||||||  ||||||||| |||||||||| || ||||| ||||||| |||||    
T  10262744 cataactcagttggtaggacaatgcattattatatgcaggggtcggggttcgaaccccagacaccccacttattcacctt-ataaa-gtgaattatagcc 10262841  T
Q  184 actaaa 189  Q
     |||||    
T  10262842 cctaaa 10262847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 187
Target Start/End: Complemental strand, 29713173 - 29713076
Alignment:
Q  90 tcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    |||||||||| | |||| || | ||||||| | || ||| |||||||||  ||||||||||||||||| || || | |||| ||||||||||||||||    
T  29713173 tcagttggcacggacatacattgttatatgcagggattggggttcgaaccccagacaccctacttatttaccttaaaaaagatgaattctagccacta 29713076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 10602070 - 10602114
Alignment:
Q  143 gacaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    ||||||| ||||||||||||||| |||| ||||||||||||||||    
T  10602070 gacaccccacttattcactttgaaaaagatgaattctagccacta 10602114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 163
Target Start/End: Complemental strand, 15392301 - 15392222
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcacttt 163  Q
    |||||||||||||| ||||  ||||| ||||||||||| | |  ||||||||||| || ||||||  |||||||||||||    
T  15392301 cataactcagttggtaggacaatgcattattatatgtaggagacgaggttcgaacctcggacacctcacttattcacttt 15392222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 160
Target Start/End: Complemental strand, 18386905 - 18386826
Alignment:
Q  81 aaacataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcac 160  Q
    ||||||| |||| |||| ||||  ||||| ||||||||||| ||| || |||||||||| | ||||||| ||||||||||    
T  18386905 aaacatagctcaattggtaggacaatgcattattatatgtaggggctggggttcgaactccggacaccccacttattcac 18386826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 34620523 - 34620624
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||| ||||| ||||  ||||| ||||||||| |||||||| |||| ||||  ||||||| ||| |||||||| || |||| ||||||||||||||    
T  34620523 catagctcggttggtaggacaatgcattattatatgcaagggttggggtttgaaccccagacactctatttattcacctt-ataa-ggtgaattctagcc 34620620  T
Q  184 acta 187  Q
    ||||    
T  34620621 acta 34620624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 36426946 - 36426845
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| |||| |||| ||||  ||||| ||||||||||| |||||| |||||||||| |  |||||| ||||||||| | | || ||||||||||||||||    
T  36426946 catagctcacttggtaggacaatgcattattatatgtaggggttggggttcgaactccgaacaccccacttattca-tcttat-aaggtgaattctagcc 36426849  T
Q  184 acta 187  Q
    ||||    
T  36426848 acta 36426845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 196
Target Start/End: Original strand, 37516024 - 37516107
Alignment:
Q  113 ttatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccactaaattactta 196  Q
    ||||||||| |||||| ||||||||| ||  |||| ||| |||||||| || | |||  |||||||||||||||||| ||||||    
T  37516024 ttatatgtaggggttggggttcgaacctcgaacactctatttattcaccttaaaaaatatgaattctagccactaaactactta 37516107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 41305156 - 41305053
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||||||||||   |||| | || |||||| | ||| |||||||| |||| | || |||| |||||||||| |||| |||||||||||| ||||    
T  41305156 catagctcagttggcagaggcatgtattagtatatgcaggggctgaggttcaaactccggataccccacttattcaccttgaaaaaggtgaattcgagcc 41305057  T
Q  184 acta 187  Q
    ||||    
T  41305056 acta 41305053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 187
Target Start/End: Original strand, 34376548 - 34376650
Alignment:
Q  85 ataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcca 184  Q
    |||| |||||||||||| ||||||| | ||||||| | | |||  |||| ||||| ||||||||| || ||||| |||||| | | ||||||| ||||||    
T  34376548 ataattcagttggcagggacatgcattgttatatgcaggagttagggtttgaactccagacaccccacctattcgctttgaaatatgtgaattatagcca 34376647  T
Q  185 cta 187  Q
    |||    
T  34376648 cta 34376650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 187
Target Start/End: Original strand, 3364757 - 3364831
Alignment:
Q  111 tattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    ||||||||| | |||  ||||||||||||| |||||||| |||||||||  ||  | ||||||||||||||||||||    
T  3364757 tattatatgcaggggccgaggttcgaactttagacaccccacttattcatctt--ttaaggtgaattctagccacta 3364831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 163
Target Start/End: Complemental strand, 32527173 - 32527088
Alignment:
Q  79 gtaaacataactcagttggcaggaaca-tgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcacttt 163  Q
    ||||||||| ||||||||||||| ||| |||| ||||||||| | |||  | |||||||||  |||||| || |||||||||||||    
T  32527173 gtaaacatagctcagttggcagggacaatgcattattatatgcaggggccggggttcgaaccccagacaacccacttattcacttt 32527088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 36413824 - 36413865
Alignment:
Q  143 gacaccctacttattcactttgataaaggtgaattctagcca 184  Q
    ||||||| ||||||||||||||| ||||||||||| ||||||    
T  36413824 gacaccccacttattcactttgaaaaaggtgaattttagcca 36413865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 23683728 - 23683776
Alignment:
Q  111 tattatatgtaagggttgaggttcgaacttcagacaccctacttattca 159  Q
    ||||||||||| |||||| ||||||||| |||||||||| | |||||||    
T  23683728 tattatatgtaggggttggggttcgaacctcagacaccccatttattca 23683776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 195
Target Start/End: Complemental strand, 36345223 - 36345160
Alignment:
Q  131 gttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccactaaattactt 195  Q
    ||||||||| ||||||| | |||||||||  |||| |||||||| |||||||||||||| |||||    
T  36345223 gttcgaact-cagacactccacttattcatcttgaaaaaggtgagttctagccactaaactactt 36345160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 165
Target Start/End: Original strand, 38807887 - 38807967
Alignment:
Q  85 ataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttga 165  Q
    ||||||||||||||||| |||||||  |||||||| | ||  |||| |||||||  ||||||||  |||||||||| ||||    
T  38807887 ataactcagttggcagggacatgcataattatatgcagggaatgagattcgaaccccagacaccgcacttattcaccttga 38807967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 42507352 - 42507404
Alignment:
Q  143 gacaccctacttattcactttgataaaggtgaattctagccactaaattactt 195  Q
    ||||||| ||||||||| ||||| ||||||||||||||| ||| ||| |||||    
T  42507352 gacaccccacttattcattttgaaaaaggtgaattctagacaccaaactactt 42507404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 84 - 195
Target Start/End: Original strand, 1044 - 1155
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||||||| ||| |||||||  |||||||||| ||| || |||||||||  ||||||||| |||||||||| |||| |||||||||||||||||    
T  1044 catagctcagttggtagggacatgcataattatatgtaggggctggggttcgaaccccagacaccccacttattcaccttgaaaaaggtgaattctagcc 1143  T
Q  184 actaaattactt 195  Q
    |||||| |||||    
T  1144 actaaactactt 1155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 3e-23; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 84 - 195
Target Start/End: Complemental strand, 26669749 - 26669638
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||||||| ||| |||||||  |||||||||| ||| || |||||||||  ||||||||| |||||||||| |||| |||||||||||||||||    
T  26669749 catagctcagttggtagggacatgcataattatatgtaggggctggggttcgaaccccagacaccccacttattcaccttgaaaaaggtgaattctagcc 26669650  T
Q  184 actaaattactt 195  Q
    |||||| |||||    
T  26669649 actaaactactt 26669638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 197
Target Start/End: Original strand, 9422838 - 9422952
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgat-aaaggtgaattctagc 182  Q
    |||||||||||||||||| ||||||| | ||||||  ||| | || |||||||||  | ||||||| |||||||||| ||||| ||||||||||||||||    
T  9422838 cataactcagttggcagggacatgcattgttatatacaagagctggggttcgaacaccggacaccccacttattcaccttgataaaaggtgaattctagc 9422937  T
Q  183 cactaaattacttaa 197  Q
    ||||||  |||||||    
T  9422938 cactaagctacttaa 9422952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 187
Target Start/End: Original strand, 6455464 - 6455561
Alignment:
Q  90 tcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    |||||||| ||| |||| || ||||||||||| ||| || |||||||||| | |||||||||||||||||| |||| |||| |||||||||| |||||    
T  6455464 tcagttggtagggacatacattattatatgtatgggctggggttcgaactccggacaccctacttattcaccttgaaaaagatgaattctagacacta 6455561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 187
Target Start/End: Original strand, 4844149 - 4844251
Alignment:
Q  85 ataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcca 184  Q
    ||||||||||||||||| ||||||| | ||||||| | |||| | ||||  ||| |||||||||  |||||||||| |||| ||| |||||||||| |||    
T  4844149 ataactcagttggcagggacatgcattgttatatgcaggggtcggggtttaaacctcagacacctcacttattcaccttgaaaaaagtgaattctaacca 4844248  T
Q  185 cta 187  Q
    |||    
T  4844249 cta 4844251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 188
Target Start/End: Complemental strand, 22730792 - 22730687
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgata-aaggtgaattctagc 182  Q
    |||||||||||||||||  ||||||| | ||||||| | ||  ||| |||||||| || ||||||| |||||||||| || | | |||||||||||||||    
T  22730792 cataactcagttggcagagacatgcattgttatatgcagggactgaagttcgaacctcggacaccccacttattcaccttaaaataaggtgaattctagc 22730693  T
Q  183 cactaa 188  Q
    ||||||    
T  22730692 cactaa 22730687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 14949110 - 14949006
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagaca-ccctacttattcactttgataaaggtgaattctagc 182  Q
    ||||||||||||||||| ||||| || ||||||||| |  ||| | |||||||||| | |||| ||| | |||||||| |||| ||||||||||| ||||    
T  14949110 cataactcagttggcagaaacatacattattatatgcagaggtcggggttcgaactccggacacccccatttattcaccttgaaaaaggtgaattatagc 14949011  T
Q  183 cacta 187  Q
    |||||    
T  14949010 cacta 14949006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 197
Target Start/End: Complemental strand, 19680292 - 19680225
Alignment:
Q  130 ggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccactaaattacttaa 197  Q
    |||||||||  | ||||||| |||||||| | |||| ||||||||||||||| |||||||||||||||    
T  19680292 ggttcgaaccccggacaccccacttattctccttgaaaaaggtgaattctagacactaaattacttaa 19680225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 187
Target Start/End: Original strand, 31595172 - 31595279
Alignment:
Q  80 taaacataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattct 179  Q
    ||||||||  ||| ||| |||| ||||||| | |||||| || |||||||| ||||||||||||| ||||  |||||| ||||||| || ||| ||||||    
T  31595172 taaacatagttcaattgtcagggacatgcattgttatatataggggttgagattcgaacttcagataccccgcttatttactttgaaaacggtaaattct 31595271  T
Q  180 agccacta 187  Q
    | ||||||    
T  31595272 atccacta 31595279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 187
Target Start/End: Original strand, 9031769 - 9031875
Alignment:
Q  82 aacataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactt-tgataaaggtgaattcta 180  Q
    |||||| ||||||||||||| ||||||| | ||||||| | || |||| ||| |||| |||||||||| ||||||||| ||   | ||||||||||||||    
T  9031769 aacatagctcagttggcagggacatgcattgttatatgcagggcttgaagtttgaacctcagacaccccacttattcatttaaaaaaaaggtgaattcta 9031868  T
Q  181 gccacta 187  Q
     ||||||    
T  9031869 accacta 9031875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 30833028 - 30833122
Alignment:
Q  90 tcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcca 184  Q
    |||||||||||| ||||||| | ||||||| | |||| | |||||||||  | ||||||| |||||||| | |||| ||||| ||||||||||||    
T  30833028 tcagttggcagggacatgcattgttatatgcaggggtcggggttcgaaccccggacaccccacttattctccttgaaaaaggagaattctagcca 30833122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 79 - 137
Target Start/End: Original strand, 30905483 - 30905541
Alignment:
Q  79 gtaaacataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaa 137  Q
    |||| |||||||||||||| ||||||||||| | ||||||||| || ||||||||||||    
T  30905483 gtaaccataactcagttggtaggaacatgcattgttatatgtagggattgaggttcgaa 30905541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 31411151 - 31411098
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaa 137  Q
    ||||||||||||| |||||||||||| ||||||||||| | | |||||||||||    
T  31411151 cataactcagttgacaggaacatgcattattatatgtaggagctgaggttcgaa 31411098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 186
Target Start/End: Complemental strand, 15289023 - 15288945
Alignment:
Q  106 tgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccact 186  Q
    |||| ||||||||||| ||| || |||||||||| ||||||||| ||||||||| | | || |||||||||||||||||||    
T  15289023 tgcattattatatgtaggggctggggttcgaactccagacaccccacttattca-tcttat-aaggtgaattctagccact 15288945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 184
Target Start/End: Original strand, 7233999 - 7234070
Alignment:
Q  113 ttatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcca 184  Q
    ||||||| | ||| || |||| |||| || ||||||| |||||||||| |||| ||||||||||||||||||    
T  7233999 ttatatgcaggggctggggtttgaacctcggacaccccacttattcaccttgaaaaaggtgaattctagcca 7234070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 24256921 - 24257024
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    ||||| |||||||| ||  ||||||| ||||||||| | |||  |||||||||||  | || |||| |||||||||| |||| ||| || ||||||||||    
T  24256921 cataagtcagttggtagagacatgcattattatatgcaggggccgaggttcgaaccccggataccccacttattcaccttgaaaaaagtaaattctagcc 24257020  T
Q  184 acta 187  Q
    ||||    
T  24257021 acta 24257024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 187
Target Start/End: Complemental strand, 18904768 - 18904672
Alignment:
Q  89 ctcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    ||||||||| ||||  ||||| ||||||||||| |||  | ||||||||||   ||||||| |||||||||| || || ||||||||||||||||||||    
T  18904768 ctcagttggtaggacaatgcattattatatgtatgggccggggttcgaactctggacaccccacttattcacctt-at-aaggtgaattctagccacta 18904672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 196
Target Start/End: Original strand, 20696884 - 20696990
Alignment:
Q  90 tcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccactaaa 189  Q
    |||||||||||  | ||||| || |||||| | || ||| |||||||||| ||||||||| |||||||   ||||| ||| |||||||||| ||||| ||    
T  20696884 tcagttggcagagatatgcattactatatgcagggattggggttcgaactccagacacccaacttattggttttgaaaaatgtgaattctaaccactgaa 20696983  T
Q  190 ttactta 196  Q
     ||||||    
T  20696984 atactta 20696990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 3037632 - 3037575
Alignment:
Q  131 gttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccactaa 188  Q
    |||||||||||||||| || |||||||||  || | |||||||||||||| |||||||    
T  3037632 gttcgaacttcagacaacccacttattcatcttaaaaaaggtgaattctaaccactaa 3037575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 5134478 - 5134423
Alignment:
Q  130 ggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    ||||||||| |||||||||| |||||||||| || |||| ||||||||||||||||||    
T  5134478 ggttcgaacctcagacaccccacttattcacctt-ataa-ggtgaattctagccacta 5134423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 193
Target Start/End: Complemental strand, 5288435 - 5288328
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||||||||||||| ||||  ||||| ||||||||| | |||| | ||| |||||| | ||||||  | |||||||| || |||| |||||||||||||     
T  5288435 cataactcagttggtaggacaatgcattattatatgcaggggtcggggtccgaactccggacacctcaattattcacctt-ataa-ggtgaattctagct 5288338  T
Q  184 actaaattac 193  Q
    ||||||||||    
T  5288337 actaaattac 5288328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 20858473 - 20858420
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaa 137  Q
    |||||||||||||||||| ||||||| | ||||||| | |||||| ||||||||    
T  20858473 cataactcagttggcagggacatgcattgttatatgcaggggttggggttcgaa 20858420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 163
Target Start/End: Original strand, 6143969 - 6144048
Alignment:
Q  84 cataactcagttggcaggaaca-tgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcacttt 163  Q
    |||| ||||||||||||| ||| |||| ||||||||||| |||| | |||||||||  | ||||||| |||||||||||||    
T  6143969 catagctcagttggcagggacaatgcattattatatgtaggggtcg-ggttcgaaccccggacaccccacttattcacttt 6144048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 8309169 - 8309273
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaa-ggtgaattctagc 182  Q
    |||| ||||||||||||| ||||||| | ||||||| | |||   || |||||||  | ||||||| || ||||||| |||| ||| |||||||||||||    
T  8309169 catagctcagttggcagggacatgcattgttatatgcatgggccaagtttcgaaccccggacaccccacctattcaccttgaaaaaaggtgaattctagc 8309268  T
Q  183 cacta 187  Q
    |||||    
T  8309269 cacta 8309273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 9438310 - 9438408
Alignment:
Q  87 aactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccact 186  Q
    ||||||||||| ||||  ||||| ||||||||| | |||||| |||||||||  | ||||||| ||| |||||| || || ||||||||||||| |||||    
T  9438310 aactcagttggtaggacaatgcattattatatgcaggggttggggttcgaaccccggacaccccactcattcacctt-at-aaggtgaattctaaccact 9438407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 9491825 - 9491749
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcac 160  Q
    |||||||||||||| ||||  ||||| ||||||||||| |||  | |||||||||  | ||||||| ||||||||||    
T  9491825 cataactcagttggtaggacaatgcattattatatgtaggggccggggttcgaaccccggacaccccacttattcac 9491749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 180
Target Start/End: Original strand, 17347260 - 17347355
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattcta 180  Q
    |||||||||||||||||| | ||||| | ||||||| | |||| | ||||||||| |  ||||||| |||||||||| || | |||||| |||||||    
T  17347260 cataactcagttggcagggatatgcattgttatatgcatgggtcg-ggttcgaaccttggacaccccacttattcaccttaaaaaaggtaaattcta 17347355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 163
Target Start/End: Original strand, 29284122 - 29284202
Alignment:
Q  84 cataactcagttggcaggaaca-tgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcacttt 163  Q
    |||||||||||||| ||||||| || | ||||||||||| || | | |||||||||  | ||||||| |||||||||||||    
T  29284122 cataactcagttggtaggaacaatgtattattatatgtagggatcggggttcgaaccccggacaccccacttattcacttt 29284202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 189
Target Start/End: Original strand, 11900576 - 11900675
Alignment:
Q  89 ctcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccactaa 188  Q
    ||||||||||||||||||||| ||||||||| | ||||||||||| ||||  |||| |||| |||||||||  |||| ||||||||||||||||||||||    
T  11900576 ctcagttggcaggaacatgcattattatatgcaggggttgaggtttgaac-acagataccccacttattcatcttgaaaaaggtgaattctagccactaa 11900674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 25470936 - 25470833
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    ||||||||||||| |||||||||||| ||||||||  | |||| | ||||||||| || ||||||| | |||||||| ||||  ||||||||||||||||    
T  25470936 cataactcagttgacaggaacatgcattattatattcatgggtcggggttcgaacctcggacaccccatttattcaccttgaagaaggtgaattctagcc 25470837  T
Q  184 acta 187  Q
    ||||    
T  25470836 acta 25470833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 84 - 165
Target Start/End: Complemental strand, 39432418 - 39432337
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttga 165  Q
    |||| ||||||||||||| ||||||| | ||||||| | |||||| ||||||||| |||||||||| |||||||||||||||    
T  39432418 catagctcagttggcagggacatgcaatgttatatgcaggggttggggttcgaacctcagacaccccacttattcactttga 39432337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 188
Target Start/End: Complemental strand, 8740746 - 8740644
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||||||||||||| ||||  ||||| ||||||||| | ||| ||||||||||||| | ||||||||||||||||| | | || ||||||||||||||||    
T  8740746 cataactcagttggtaggacaatgcagtattatatgcaggggctgaggttcgaactccggacaccctacttattca-tcttat-aaggtgaattctagcc 8740649  T
Q  184 actaa 188  Q
    |||||    
T  8740648 actaa 8740644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 180
Target Start/End: Original strand, 7345433 - 7345529
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattcta 180  Q
    |||||||||||||||||| ||||||| ||||||||| | |||| | | ||| |||| || |||||| |||||||||| || | ||||||||||||||    
T  7345433 cataactcagttggcagggacatgcattattatatgcaggggtcgggcttccaactccaaacaccccacttattcaccttaaaaaaggtgaattcta 7345529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 186
Target Start/End: Complemental strand, 22847344 - 22847250
Alignment:
Q  92 agttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccact 186  Q
    |||||||||| ||||||| | ||||||| | |||| |||||||||||  || |||||  |||||||||| || | ||||||||||||||||||||    
T  22847344 agttggcagggacatgcattgttatatgcaggggtcgaggttcgaaccccacacacctcacttattcaccttaaaaaaggtgaattctagccact 22847250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 187
Target Start/End: Original strand, 24074516 - 24074612
Alignment:
Q  89 ctcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    ||||||||| ||||  ||||| ||||||||||| ||||||| |||||||| || ||||||  |||||||||| || || ||||||||||||||||||||    
T  24074516 ctcagttggtaggacaatgcattattatatgtaggggttgaagttcgaacctcggacacctcacttattcacctt-at-aaggtgaattctagccacta 24074612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 43875067 - 43874991
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcac 160  Q
    |||||||||||||  ||||  ||||| ||||||||||| ||| ||||||||||||  ||||||||| ||||||||||    
T  43875067 cataactcagttgataggacaatgcattattatatgtaggggctgaggttcgaacaccagacaccccacttattcac 43874991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 163
Target Start/End: Complemental strand, 35301249 - 35301174
Alignment:
Q  89 ctcagttggcaggaaca-tgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcacttt 163  Q
    ||||||||||||| ||| |||| ||||||||| | |||| | |||||||||| | |||||||||||||||||||||    
T  35301249 ctcagttggcagggacaatgcattattatatgcaggggtcggggttcgaactccggacaccctacttattcacttt 35301174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 43468795 - 43468694
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||||||| ||||  ||||| | ||||||||| |||| | |||||||||| | ||||||| |||||||||| || |||| ||||||||||||||    
T  43468795 catagctcagttggtaggacaatgcattgttatatgtaggggtcggggttcgaactccggacaccccacttattcacctt-ataa-ggtgaattctagcc 43468698  T
Q  184 acta 187  Q
    ||||    
T  43468697 acta 43468694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 180
Target Start/End: Original strand, 43554452 - 43554551
Alignment:
Q  82 aacataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttca-gacaccctacttattcactttgataaaggtgaattcta 180  Q
    |||||| ||||||||||||  |||| || | ||||||||| |||||| |||||||||  |  |||| |||||||||||||||||| |||| |||||||||    
T  43554452 aacatagctcagttggcagcgacatccattgttatatgtaggggttggggttcgaaccccctgacatcctacttattcactttgaaaaagatgaattcta 43554551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 198
Target Start/End: Complemental strand, 44070431 - 44070346
Alignment:
Q  111 tattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccactaaattacttaac 198  Q
    ||||||||||| |||  | ||||||||| || |||||||||||||||||| || || |||||||||||||||||||||| ||| ||||    
T  44070431 tattatatgtaggggccgcggttcgaacctcggacaccctacttattcacctt-at-aaggtgaattctagccactaaactacctaac 44070346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 189
Target Start/End: Original strand, 30500481 - 30500577
Alignment:
Q  92 agttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccactaaa 189  Q
    |||||||||  ||||||| ||||||||||| |||||| |||||||||| | |||   | |||||||||| |||| |||  ||||||||||||||||||    
T  30500481 agttggcagagacatgcattattatatgtaggggttggggttcgaactccggaccatccacttattcacattga-aaaaatgaattctagccactaaa 30500577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 159
Target Start/End: Complemental strand, 36633716 - 36633635
Alignment:
Q  79 gtaaacataactcagttggcaggaaca-tgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattca 159  Q
    |||||||||| ||||||||||| |||| |||| | ||||||||| |||||||||||| |||| || | ||||| ||||||||    
T  36633716 gtaaacataaatcagttggcagaaacaatgcattgttatatgtaggggttgaggttcaaactccatatacccttcttattca 36633635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 192
Target Start/End: Original strand, 6325303 - 6325382
Alignment:
Q  112 attatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccactaaatta 192  Q
    |||||||| | |||||| |||| ||||  ||||||||| ||| |||||| |||| ||||||||||||||||||||| ||||    
T  6325303 attatatgcaggggttggggtttgaacc-cagacaccccactcattcaccttgaaaaaggtgaattctagccactagatta 6325382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 163
Target Start/End: Original strand, 10292356 - 10292436
Alignment:
Q  84 cataactcagttggcaggaaca-tgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcacttt 163  Q
    |||| ||||||||||||| ||| |||| ||||||||| | ||| |||| ||||||| || ||||||| |||||||||||||    
T  10292356 catagctcagttggcagggacaatgcattattatatgcaggggctgagattcgaacctcggacaccccacttattcacttt 10292436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 184
Target Start/End: Original strand, 12560037 - 12560136
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| |||||||||||||||||  || | ||||||| | |||||| ||||||||| ||| |||||  ||||||| || |||| |||||| ||||||||||    
T  12560037 catagctcagttggcaggaacaa-cattgttatatgcaggggttggggttcgaacctcaaacacctcacttatttaccttgaaaaaggtcaattctagcc 12560135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 163
Target Start/End: Original strand, 22426405 - 22426485
Alignment:
Q  84 cataactcagttggcaggaaca-tgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcacttt 163  Q
    ||||||||| ||| |||| ||| |||| ||||||||||| ||||||||||||||||  | ||||||| | |||||||||||    
T  22426405 cataactcaattgacagggacaatgcattattatatgtaggggttgaggttcgaacccctgacaccccatttattcacttt 22426485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 163
Target Start/End: Complemental strand, 40329695 - 40329615
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttg-aggttcgaacttcagacaccctacttattcacttt 163  Q
    |||||||||||||| ||||  ||||| ||||||||| | |||| | |||||||||  || |||||||||||||||||||||    
T  40329695 cataactcagttggtaggataatgcattattatatgcatgggtcggaggttcgaatctcggacaccctacttattcacttt 40329615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 220452 - 220349
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||||||||||| ||||||| | ||||||| |  |||   ||||||||   | ||||||| |||||||||| |||| |||||||||||||| ||    
T  220452 catagctcagttggcagggacatgcaatgttatatgcagaggtcagggttcgaatcccggacaccccacttattcaccttgaaaaaggtgaattctaacc 220353  T
Q  184 acta 187  Q
    ||||    
T  220352 acta 220349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 689607 - 689504
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||||||||||| ||||||| | ||||||| |  |||   ||||||||   | ||||||| |||||||||| |||| |||||||||||||| ||    
T  689607 catagctcagttggcagggacatgcaatgttatatgcagaggtcagggttcgaatcccggacaccccacttattcaccttgaaaaaggtgaattctaacc 689508  T
Q  184 acta 187  Q
    ||||    
T  689507 acta 689504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 734075 - 733972
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||||||||||| ||||||| | ||||||| |  |||   ||||||||   | ||||||| |||||||||| |||| |||||||||||||| ||    
T  734075 catagctcagttggcagggacatgcaatgttatatgcagaggtcagggttcgaatcccggacaccccacttattcaccttgaaaaaggtgaattctaacc 733976  T
Q  184 acta 187  Q
    ||||    
T  733975 acta 733972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 857971 - 857868
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||||||||||| ||||||| | ||||||| |  |||   ||||||||   | ||||||| |||||||||| |||| |||||||||||||| ||    
T  857971 catagctcagttggcagggacatgcaatgttatatgcagaggtcagggttcgaatcccggacaccccacttattcaccttgaaaaaggtgaattctaacc 857872  T
Q  184 acta 187  Q
    ||||    
T  857871 acta 857868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 183
Target Start/End: Original strand, 9524962 - 9525059
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||||||| ||||  ||||| ||||||||| | |||  | |||||||||  |||||||||||||||||||| || || ||||||||||||||||    
T  9524962 catagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccagacaccctacttattcacctt-at-aaggtgaattctagcc 9525059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 188
Target Start/End: Complemental strand, 13702421 - 13702340
Alignment:
Q  105 atgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccactaa 188  Q
    ||||| ||||||||| | |||| | ||||||||| |||||||||  |||||||||| || |||| |||||||||||||||||||    
T  13702421 atgcattattatatgcaggggtcggggttcgaacctcagacacctcacttattcacctt-ataa-ggtgaattctagccactaa 13702340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 133
Target Start/End: Original strand, 16611596 - 16611639
Alignment:
Q  90 tcagttggcaggaacatgcactattatatgtaagggttgaggtt 133  Q
    |||||||||||| ||||||| ||||||||||| |||||||||||    
T  16611596 tcagttggcagggacatgcattattatatgtaggggttgaggtt 16611639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 183
Target Start/End: Complemental strand, 24608573 - 24608476
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||||||| ||||  ||||| ||||||||| | |||  | |||||||||  |||||||||||||||||||| || || ||||||||||||||||    
T  24608573 catagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccagacaccctacttattcacctt-at-aaggtgaattctagcc 24608476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 185
Target Start/End: Complemental strand, 34073323 - 34073230
Alignment:
Q  90 tcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccac 185  Q
    |||||||| ||||  ||||| ||||||||||| ||||  ||||||||||  | ||||||| |||||||||| || || ||||||||||||||||||    
T  34073323 tcagttggtaggataatgcattattatatgtaggggtcaaggttcgaaccccggacaccccacttattcacctt-at-aaggtgaattctagccac 34073230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 197
Target Start/End: Complemental strand, 27821928 - 27821882
Alignment:
Q  151 acttattcactttgataaaggtgaattctagccactaaattacttaa 197  Q
    |||||||||| || | |||||||||||||||||||||||| ||||||    
T  27821928 acttattcaccttaaaaaaggtgaattctagccactaaatcacttaa 27821882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 195
Target Start/End: Complemental strand, 33570490 - 33570410
Alignment:
Q  113 ttatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccactaaattactt 195  Q
    ||||||| | |||| | ||||||||| || ||||||| |||||||||| || |||| |||||||||||||||||||| |||||    
T  33570490 ttatatgcatgggtcggggttcgaacctcggacaccccacttattcacctt-ataa-ggtgaattctagccactaaactactt 33570410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 163
Target Start/End: Original strand, 2696537 - 2696617
Alignment:
Q  84 cataactcagttggcaggaaca-tgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcacttt 163  Q
    |||||||||||||||||| ||| |||| ||||||||| | |||  | |||||||||  | ||||||| |||||||||||||    
T  2696537 cataactcagttggcagggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcacttt 2696617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 189
Target Start/End: Original strand, 29653069 - 29653165
Alignment:
Q  94 ttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaa-ggtgaattctagccactaaa 189  Q
    |||||||| ||||||| ||||||||| | || | | |||||||||| | | ||| | |||||||||| || | ||| ||||||||||||||||||||    
T  29653069 ttggcagggacatgcattattatatgcagggatcgtggttcgaactcctgccactccacttattcaccttaaaaaaaggtgaattctagccactaaa 29653165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 84 - 188
Target Start/End: Complemental strand, 9769670 - 9769566
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||||||||||| ||||||| ||||||||||| || ||| |||||||||  | ||||||| |||||||||| |||| |||||||||||||| ||    
T  9769670 catagctcagttggcagggacatgcattattatatgtagggattggggttcgaaccccggacaccccacttattcaccttgaaaaaggtgaattctaacc 9769571  T
Q  184 actaa 188  Q
    |||||    
T  9769570 actaa 9769566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 188
Target Start/End: Original strand, 195054 - 195153
Alignment:
Q  89 ctcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccactaa 188  Q
    ||||||||||||| |||||||  |||||||| | ||| ||||||||| ||  ||||||||| |||||||||| |||| |||||||||||||| |||||||    
T  195054 ctcagttggcagggacatgcataattatatgcaggggctgaggttcgtaccccagacaccccacttattcaccttgaaaaaggtgaattctaaccactaa 195153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 43020616 - 43020719
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||| ||||||||| ||||||| ||||||||| | |||||| ||||||||| || ||||||| ||| |||||| |||| ||| |||||||||||||    
T  43020616 catagctcggttggcagggacatgcattattatatgcaggggttggggttcgaacctcggacaccccactcattcaccttgaaaaatgtgaattctagcc 43020715  T
Q  184 acta 187  Q
    ||||    
T  43020716 acta 43020719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 82 - 195
Target Start/End: Original strand, 19866478 - 19866591
Alignment:
Q  82 aacataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctag 181  Q
    ||||||||||| |||||||| ||||||| || |||||||| |||  || |||  |||| | ||||||| |||||||||| || | |||||||||||||||    
T  19866478 aacataactcaattggcagggacatgcattagtatatgtaggggccgaagtttaaactccggacaccccacttattcaccttaaaaaaggtgaattctag 19866577  T
Q  182 ccactaaattactt 195  Q
    |||||||| |||||    
T  19866578 ccactaaactactt 19866591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 3341826 - 3341723
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||||||||||| ||||||| ||||||||| | |||  | || ||||||  | ||||||| |||||||||| |||| |||||||||||||||||    
T  3341826 catagctcagttggcagggacatgcattattatatgcaggggccggggatcgaaccccggacaccccacttattcaccttgaaaaaggtgaattctagcc 3341727  T
Q  184 acta 187  Q
    ||||    
T  3341726 acta 3341723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 9768899 - 9768796
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||||||||||| ||||||| | ||||||| | |||| | |||||||||  | ||||||| |||||||||| |||| ||||||||||||||||     
T  9768899 catagctcagttggcagggacatgcattgttatatgcaggggtcggggttcgaaccccggacaccccacttattcaccttgaaaaaggtgaattctagct 9768800  T
Q  184 acta 187  Q
    ||||    
T  9768799 acta 9768796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 187
Target Start/End: Original strand, 41677070 - 41677168
Alignment:
Q  89 ctcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    ||||||||||||  |||| || |||||||||   |||| | |||||||||| | ||||||| |||||||||| |||| |||||||||||||||||||||    
T  41677070 ctcagttggcagagacattcattattatatgcgggggtcggggttcgaactccggacaccccacttattcaccttgaaaaaggtgaattctagccacta 41677168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 195
Target Start/End: Original strand, 13941330 - 13941435
Alignment:
Q  90 tcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccactaaa 189  Q
    |||||||||| | ||||||| | ||||||| | || | |||||||||||||| ||||||| |||||||||  |||| ||| |||||||||| ||||||||    
T  13941330 tcagttggcaaggacatgcattgttatatgcagggttcgaggttcgaacttcggacaccccacttattcatcttgaaaaaagtgaattctaaccactaaa 13941429  T
Q  190 ttactt 195  Q
     |||||    
T  13941430 ctactt 13941435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 195
Target Start/End: Complemental strand, 7015777 - 7015665
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctactt-attcactttgataaaggtgaattctagc 182  Q
    |||| |||||||||| || ||||||| | ||||||||| ||| ||||||||||||| |  |||||| |||| |||||| |||| ||| ||||||| || |    
T  7015777 catagctcagttggctgggacatgcattgttatatgtaggggctgaggttcgaactccgaacaccccacttaattcaccttgaaaaatgtgaattttaac 7015678  T
Q  183 cactaaattactt 195  Q
    |||||||||||||    
T  7015677 cactaaattactt 7015665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 188
Target Start/End: Complemental strand, 15774402 - 15774300
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||||||||||||| ||||  ||||| ||||||||||| |||| | |||||||||  | ||||||| |||||||||| || || ||||||||||||||||    
T  15774402 cataactcagttggtaggacaatgcattattatatgtaggggtcggggttcgaaccccggacaccccacttattcacctt-at-aaggtgaattctagcc 15774305  T
Q  184 actaa 188  Q
    |||||    
T  15774304 actaa 15774300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 195
Target Start/End: Original strand, 16182809 - 16182925
Alignment:
Q  79 gtaaacataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattc 178  Q
    |||| |||| ||||||||||||  ||||||| ||||||||||| ||| || ||||| |||  | ||||||| |||||||||  |||| |||  |||||||    
T  16182809 gtaagcatagctcagttggcagagacatgcattattatatgtaggggctggggttcaaaccccggacaccccacttattcatcttgaaaaatatgaattc 16182908  T
Q  179 tagccactaaattactt 195  Q
    || ||||||||||||||    
T  16182909 taaccactaaattactt 16182925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 89 - 187
Target Start/End: Original strand, 12553203 - 12553302
Alignment:
Q  89 ctcagttggcaggaacatgcactattatatgtaagggttgagg-ttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    ||||||||| ||||||||||| | ||||||| | |||  | || |||||||  | ||||||| ||||||||||||||| |||||||||||||||||||||    
T  12553203 ctcagttggtaggaacatgcattgttatatgcaggggccgggggttcgaaccccggacaccccacttattcactttgaaaaaggtgaattctagccacta 12553302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 183
Target Start/End: Original strand, 50575911 - 50576005
Alignment:
Q  89 ctcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    ||||||||| ||| ||||||| | ||||||| ||||| || ||||||||| |||||||||  |||||||||| || | ||||||||||| |||||    
T  50575911 ctcagttggaagggacatgcattgttatatgcaagggctggggttcgaacctcagacacctcacttattcaccttaaaaaaggtgaattatagcc 50576005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 187
Target Start/End: Complemental strand, 50199564 - 50199463
Alignment:
Q  86 taactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccac 185  Q
    |||||||||||| ||| ||||||| | ||||||| | |||  | |||||||||  | ||||||| |||||||||| |||| |||||| ||||||||||||    
T  50199564 taactcagttggtagggacatgcattgttatatgcaggggccggggttcgaaccccggacaccccacttattcaccttgaaaaaggtcaattctagccac 50199465  T
Q  186 ta 187  Q
    ||    
T  50199464 ta 50199463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 18179333 - 18179436
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||||||||||||||||| ||||||| | ||||||| | ||   |  ||||||||  |||||||||| ||||||| | |||| ||||| |||||||||||    
T  18179333 cataactcagttggcagggacatgcattgttatatgcagggaccggagttcgaaccccagacaccctgcttattctccttgaaaaaggagaattctagcc 18179432  T
Q  184 acta 187  Q
    ||||    
T  18179433 acta 18179436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 23973552 - 23973469
Alignment:
Q  104 catgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    |||||| ||||||||| |||||||| | |||||||  |  |||||| |||||||||| |||| ||| |||||||||||||||||    
T  23973552 catgcattattatatgcaagggttgggattcgaaccccgtacaccccacttattcacgttgaaaaatgtgaattctagccacta 23973469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 41998103 - 41998205
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    ||||||| |||||| ||  ||||||| ||||||||  |||||  ||| |||||||  ||||||||| |||||||||| |||| ||||| |||||||||||    
T  41998103 cataactaagttggtagagacatgcattattatatacaagggccgag-ttcgaaccacagacaccccacttattcacattgaaaaaggcgaattctagcc 41998201  T
Q  184 acta 187  Q
    ||||    
T  41998202 acta 41998205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 84 - 154
Target Start/End: Original strand, 1580834 - 1580904
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctactt 154  Q
    |||||||||||||||||| |||| || | ||||||| |||||||||||||||||   ||||||||| ||||    
T  1580834 cataactcagttggcagggacatacaatgttatatgcaagggttgaggttcgaatcccagacaccccactt 1580904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 187
Target Start/End: Complemental strand, 2903116 - 2903014
Alignment:
Q  85 ataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcca 184  Q
    |||||||||||| |||| ||||||| | ||||||| |  ||| | |||||||||  |  |||||| |||||||||| |||| ||||| ||||||||||||    
T  2903116 ataactcagttgccagggacatgcattgttatatgcagaggtcggggttcgaaccccgaacaccccacttattcaccttgaaaaaggagaattctagcca 2903017  T
Q  185 cta 187  Q
    |||    
T  2903016 cta 2903014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 84 - 195
Target Start/End: Complemental strand, 24168669 - 24168556
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcacttt--gataaaggtgaattctag 181  Q
    |||| ||||||| | ||||||||||| ||||||||||| ||   | |||||||||  ||||||||| |||||||||| ||   | |||||| ||||||||    
T  24168669 catagctcagtttgtaggaacatgcattattatatgtagggaccggggttcgaaccccagacaccccacttattcaccttaaaaaaaaggtaaattctag 24168570  T
Q  182 ccactaaattactt 195  Q
    ||||||| ||||||    
T  24168569 ccactaagttactt 24168556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 195
Target Start/End: Complemental strand, 47355843 - 47355746
Alignment:
Q  97 gcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccactaaattactt 195  Q
    ||||| |||||||  |||||||||| |||||||| |||||||  ||||||||  |||||||||| |||| || ||| |||||||||||| | |||||||    
T  47355843 gcagggacatgcataattatatgtaggggttgagattcgaacc-cagacacctcacttattcaccttgaaaagggtaaattctagccaccagattactt 47355746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 48565239 - 48565133
Alignment:
Q  82 aacataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctag 181  Q
    |||||| ||||||||||||| | |  || | ||||||| ||||  | || ||||||| || ||||||| ||||||| ||||||| |||||||||||||||    
T  48565239 aacatatctcagttggcagggataaacattgttatatgcaaggactaagtttcgaacctcggacaccccacttatttactttgaaaaaggtgaattctag 48565140  T
Q  182 ccactaa 188  Q
     ||||||    
T  48565139 acactaa 48565133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 185
Target Start/End: Complemental strand, 4354195 - 4354096
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||||||| ||||  ||||| ||||||||| | |||  | |||||||||||| ||||||| |||||||||| || ||||| |||||||||||||    
T  4354195 catagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaacttcggacaccccacttattcacctt-ataaa-gtgaattctagcc 4354098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 163
Target Start/End: Original strand, 5684121 - 5684205
Alignment:
Q  78 tgtaaacataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcacttt 163  Q
    ||||| |||| ||||||||||||  ||||||| ||||||||| | ||||| ||| | |||| |||||||||| |||||||||||||    
T  5684121 tgtaagcatagctcagttggcagagacatgcattattatatgcaggggtt-aggattgaacctcagacaccccacttattcacttt 5684205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 9410380 - 9410307
Alignment:
Q  122 agggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccactaaattactt 195  Q
    ||||||||| ||||||| |||||||||| |||||||||  |||| ||||||||||| || | |||||| |||||    
T  9410380 agggttgagattcgaacctcagacaccccacttattcatcttgaaaaaggtgaattttaactactaaactactt 9410307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 9976428 - 9976371
Alignment:
Q  130 ggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    |||||||||| | ||||||| |||||||||| |||| ||| |||||||||||||||||    
T  9976428 ggttcgaactccggacaccccacttattcaccttgaaaaaagtgaattctagccacta 9976371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 33844668 - 33844725
Alignment:
Q  130 ggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    |||||||||  | ||||||| ||||||||||||||| ||||||||||| |||||||||    
T  33844668 ggttcgaaccccggacaccccacttattcactttgaaaaaggtgaattatagccacta 33844725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 33949310 - 33949253
Alignment:
Q  130 ggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    |||||||||  | ||||||| ||||||||||||||| ||||||||||| |||||||||    
T  33949310 ggttcgaaccccggacaccccacttattcactttgaaaaaggtgaattatagccacta 33949253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 50327957 - 50328010
Alignment:
Q  111 tattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttg 164  Q
    ||||||||||||| ||||| ||||||| ||| ||||||| ||||||||||||||    
T  50327957 tattatatgtaagagttgaagttcgaatttcggacaccccacttattcactttg 50328010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 187
Target Start/End: Original strand, 4616905 - 4616979
Alignment:
Q  111 tattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    ||||||||||| |||| | |||||||||  ||||||||| |||||||||| || ||||| |||||||||||||||||    
T  4616905 tattatatgtaggggtcgcggttcgaaccacagacaccccacttattcacctt-ataaa-gtgaattctagccacta 4616979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 180
Target Start/End: Original strand, 9931092 - 9931188
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattcta 180  Q
    |||||||||||| ||||| ||||||| ||||||||| ||| | ||  ||||||||  || |||||| |||||||||| || |  |||||||||||||    
T  9931092 cataactcagttagcagggacatgcattattatatgcaagagctggagttcgaaccccaaacaccccacttattcaccttaaagaaggtgaattcta 9931188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 12073167 - 12073091
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcac 160  Q
    |||||||||||||| ||||  ||||| |||||||| ||||| | |||||||||||| | ||||||| | ||||||||    
T  12073167 cataactcagttggtaggataatgcattattatatctaaggatcgaggttcgaactccggacacccaatttattcac 12073091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 193
Target Start/End: Original strand, 42908781 - 42908885
Alignment:
Q  89 ctcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccactaa 188  Q
    ||||||||||||| ||||||| | ||||||| | |||| | |||||||||| | || |||| ||||||||   |||| ||||| |||||||| ||||||     
T  42908781 ctcagttggcagggacatgcattgttatatgcaggggtcggggttcgaactccggataccccacttattcttcttgaaaaaggagaattctaaccactag 42908880  T
Q  189 attac 193  Q
    |||||    
T  42908881 attac 42908885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 184
Target Start/End: Complemental strand, 48260279 - 48260179
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||||||||||| |  |||| ||||||||||  |||| |  ||||||||  | ||||||| |||||||||| |||| ||| |||||||||||||    
T  48260279 catagctcagttggcagggatgtgcattattatatgtcggggtcggagttcgaaccccggacaccccacttattcaccttgaaaaatgtgaattctagcc 48260180  T
Q  184 a 184  Q
    |    
T  48260179 a 48260179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 49251485 - 49251409
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcac 160  Q
    |||||||||||||| ||||  ||||| ||||||||| | |||| | |||||||||  ||||||||| ||||||||||    
T  49251485 cataactcagttggtaggacaatgcattattatatgcaggggtcggggttcgaaccccagacaccccacttattcac 49251409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 195
Target Start/End: Original strand, 3797860 - 3797970
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||||||||||||| | | | |||||  |||||||||| ||| || |||||||||   |||||||| |||||||||| || | ||||||||||| |||||    
T  3797860 cataactcagttggtaaggatatgcataattatatgtaggggctggggttcgaaccctagacaccccacttattcacctt-aaaaaggtgaattatagcc 3797958  T
Q  184 actaaattactt 195  Q
    | |||| |||||    
T  3797959 attaaactactt 3797970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 139
Target Start/End: Complemental strand, 7182984 - 7182929
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaact 139  Q
    ||||| |||||| |||||   ||||| |||||||||||||||||||||||||||||    
T  7182984 cataattcagttagcagggcaatgcattattatatgtaagggttgaggttcgaact 7182929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 183
Target Start/End: Complemental strand, 11238118 - 11238019
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||| ||||| | ||||||| ||||||||| | |||| | ||||||||   | ||||||| |||||||||  |||| |||||||||||||||||    
T  11238118 catagctcagatggcatggacatgcattattatatgcaggggtcggggttcgaatcccggacaccccacttattcatcttgaaaaaggtgaattctagcc 11238019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 3569055 - 3569125
Alignment:
Q  90 tcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcac 160  Q
    |||||||||||| ||||||| | ||||||||| ||||   |||||||| |||||||| |||| ||||||||    
T  3569055 tcagttggcagggacatgcattgttatatgtaggggtcagggttcgaatttcagacatcctatttattcac 3569125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 11802110 - 11802056
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaac 138  Q
    |||||||||||||| ||||  ||||| ||||||||||| |||||| |||||||||    
T  11802110 cataactcagttggtaggacaatgcattattatatgtaggggttggggttcgaac 11802056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 23758343 - 23758289
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaac 138  Q
    |||| |||||||||||| ||| |||| ||||||||| | ||||||||||||||||    
T  23758343 catagctcagttggcagaaacgtgcattattatatgcaggggttgaggttcgaac 23758289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 137
Target Start/End: Complemental strand, 28354202 - 28354144
Alignment:
Q  79 gtaaacataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaa 137  Q
    ||||||||| |||||||||| ||||| |||| ||||||||||| |||  ||||||||||    
T  28354202 gtaaacatatctcagttggctggaacgtgcattattatatgtaggggccgaggttcgaa 28354144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 187
Target Start/End: Complemental strand, 34560422 - 34560327
Alignment:
Q  89 ctcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    ||||||||| ||||  ||||| ||||||||||| ||| | |||||||||| || ||||||| |||||||||| || || |||||||||||||| |||||    
T  34560422 ctcagttggtaggataatgcattattatatgtatggg-tcaggttcgaacctcggacaccccacttattcacctt-at-aaggtgaattctagtcacta 34560327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 4611274 - 4611217
Alignment:
Q  131 gttcgaacttcagacaccctacttattcactttga-taaaggtgaattctagccacta 187  Q
    ||||||||| | ||||||| ||||||| || |||| ||||||||||||||||||||||    
T  4611274 gttcgaactccggacaccccacttatttaccttgaataaaggtgaattctagccacta 4611217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 195
Target Start/End: Original strand, 8904261 - 8904370
Alignment:
Q  86 taactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccac 185  Q
    ||||||| ||||||| |||||||| | |||||| ||  |||| |||||| |||     |||||| ||||||||| ||||| |||||||||||||| | ||    
T  8904261 taactcaattggcagaaacatgcattgttatatatataggttaaggttcaaacccataacaccccacttattcattttgaaaaaggtgaattctaacaac 8904360  T
Q  186 taaattactt 195  Q
    || |||||||    
T  8904361 tagattactt 8904370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 187
Target Start/End: Original strand, 18646687 - 18646794
Alignment:
Q  78 tgtaaacataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaatt 177  Q
    ||||| |||||||||||||||| | ||||||| | | ||||| | |||||| |||| ||||| |  |||||| |||||||  |||||| |||||||||||    
T  18646687 tgtaagcataactcagttggcatggacatgcattgtgatatgca-gggttgcggtttgaactccgaacaccc-acttattttctttgaaaaaggtgaatt 18646784  T
Q  178 ctagccacta 187  Q
    ||| ||||||    
T  18646785 ctaaccacta 18646794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 177
Target Start/End: Original strand, 24889189 - 24889238
Alignment:
Q  128 gaggttcgaacttcagacaccctacttattcactttgataaaggtgaatt 177  Q
    |||||||||||| |  |||||| ||||||||||||||| |||||||||||    
T  24889189 gaggttcgaactccgaacaccccacttattcactttgaaaaaggtgaatt 24889238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 182
Target Start/End: Complemental strand, 27655038 - 27654997
Alignment:
Q  141 cagacaccctacttattcactttgataaaggtgaattctagc 182  Q
    ||||||||| |||||||||| |||| ||||||||||||||||    
T  27655038 cagacaccccacttattcaccttgaaaaaggtgaattctagc 27654997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 187
Target Start/End: Original strand, 39433369 - 39433464
Alignment:
Q  90 tcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    |||||||| | ||| ||||| ||||||||| | |||  || |||||||| || ||||||| |||||||||| || |||| ||||||||||||||||||    
T  39433369 tcagttggtatgaaaatgcattattatatgcaggggccgatgttcgaacctcggacaccccacttattcacctt-ataa-ggtgaattctagccacta 39433464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 8364498 - 8364397
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||||||||||||| ||||| ||||| ||||||||||| |||| |  ||||||||  |  || ||| |||||||||| ||  | |||||||||||||| |    
T  8364498 cataactcagttggtaggaaaatgcattattatatgtatgggtcggagttcgaaccccgaacgccccacttattcacctt--ttaaggtgaattctagtc 8364401  T
Q  184 acta 187  Q
    ||||    
T  8364400 acta 8364397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 163
Target Start/End: Original strand, 29491474 - 29491554
Alignment:
Q  84 cataactcagttggcaggaaca-tgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcacttt 163  Q
    |||| ||||||||||||| ||| |||| ||||||||| | |||| | |||||||||  | ||||||| |||||||||||||    
T  29491474 catagctcagttggcagggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttattcacttt 29491554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 33694547 - 33694623
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcac 160  Q
    ||||||| |||||||||| | ||||| ||||||||||| |||| |||||| ||||  |  |||||| ||||||||||    
T  33694547 cataacttagttggcagggatatgcattattatatgtaggggtcgaggtttgaacgccgaacacccaacttattcac 33694623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 163
Target Start/End: Original strand, 39238720 - 39238800
Alignment:
Q  84 cataactcagttggcaggaaca-tgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcacttt 163  Q
    |||| ||||||||||||| ||| |||| ||||||||| | |||  |||||||||||  | ||||||| |||||||||||||    
T  39238720 catagctcagttggcagggacaatgcattattatatgcaggggccgaggttcgaaccccggacaccccacttattcacttt 39238800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 41182838 - 41182881
Alignment:
Q  143 gacaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    ||||||| ||||||||||||||| |||||||||||||||| ||||    
T  41182838 gacaccccacttattcactttga-aaaggtgaattctagcgacta 41182881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 187
Target Start/End: Complemental strand, 49606793 - 49606686
Alignment:
Q  79 gtaaacataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattc 178  Q
    |||| |||| ||||||||  ||||  ||||| ||||||||||| |||  |  ||||||||||| ||||||| |||||||||  || |||| ||||||||     
T  49606793 gtaagcatagctcagttgttaggacaatgcattattatatgtaggggccggagttcgaacttcggacaccccacttattcagctt-ataagggtgaattt 49606695  T
Q  179 tagccacta 187  Q
    |||||||||    
T  49606694 tagccacta 49606686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 184
Target Start/End: Complemental strand, 34407176 - 34407080
Alignment:
Q  88 actcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcca 184  Q
    |||||||||||||| ||||||| ||||||||| | |||||| |||||||||  ||||||||| |||||||||  |||| || | |||||||||||||    
T  34407176 actcagttggcagggacatgcattattatatgcaggggttggggttcgaaccccagacaccccacttattcatcttgaaaatgatgaattctagcca 34407080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 90 - 189
Target Start/End: Complemental strand, 4045718 - 4045619
Alignment:
Q  90 tcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccactaaa 189  Q
    ||||||| |||| ||||||| | ||||||| | |||| |||||||||||||| ||||||| |||||||||  |||| |||||||||||||| || |||||    
T  4045718 tcagttgacagggacatgcattgttatatgcaggggtcgaggttcgaacttcggacaccccacttattcatcttgaaaaaggtgaattctaaccgctaaa 4045619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 185
Target Start/End: Original strand, 23025910 - 23026003
Alignment:
Q  92 agttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccac 185  Q
    ||||||||| |||||||| ||||| |||||  | |||||||| ||||  ||||||||| ||||||||||||| | |||||||||||||| ||||    
T  23025910 agttggcagaaacatgcattattaaatgtagcgattgaggtttgaaccccagacaccccacttattcactttaaaaaaggtgaattctaaccac 23026003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 84 - 181
Target Start/End: Original strand, 23237367 - 23237464
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctag 181  Q
    |||| ||||||||||||| ||||||| ||||||||||| |||| |  ||||||||| | |||| || || ||||||| |||| |||||||||||||||    
T  23237367 catagctcagttggcagggacatgcattattatatgtaggggtcggagttcgaactccggacatcccacatattcacgttgaaaaaggtgaattctag 23237464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 84 - 185
Target Start/End: Complemental strand, 24160618 - 24160517
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||||||||||||||||  ||||||||| ||||||| | |||| | |||||||||  | ||||| | ||||||||||||| | |||| ||||||||||||    
T  24160618 cataactcagttggcagagacatgcactgttatatgcaggggtcggggttcgaaccccggacactccacttattcactttcaaaaagttgaattctagcc 24160519  T
Q  184 ac 185  Q
    ||    
T  24160518 ac 24160517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 187
Target Start/End: Complemental strand, 43566888 - 43566785
Alignment:
Q  82 aacataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctag 181  Q
    |||||| ||||||||| ||||  ||||| ||||||||| | |||| | ||||||||| |||||||||| |||||||||| || |||| ||||||||||||    
T  43566888 aacatagctcagttggtaggacaatgcattattatatgcaggggtcggggttcgaacctcagacaccccacttattcacctt-ataa-ggtgaattctag 43566791  T
Q  182 ccacta 187  Q
    ||||||    
T  43566790 ccacta 43566785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 36277167 - 36277262
Alignment:
Q  89 ctcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccac 185  Q
    |||||||||||| |||||||| ||||||||||||||||||  ||||||||  || |||||||| |||||||| ||   ||||||||||||| |||||    
T  36277167 ctcagttggcag-aacatgcattattatatgtaagggttggagttcgaaccccaaacaccctatttattcacgttacaaaaggtgaattcttgccac 36277262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 86 - 189
Target Start/End: Original strand, 49146091 - 49146192
Alignment:
Q  86 taactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccac 185  Q
    |||||||||||| ||||  ||||| ||||||||| | |||| | |||||||||  | ||||||| ||||||||||||| || ||||||||||||||||||    
T  49146091 taactcagttggtaggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttattcacttt-at-aaggtgaattctagccac 49146188  T
Q  186 taaa 189  Q
    ||||    
T  49146189 taaa 49146192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 174
Target Start/End: Complemental strand, 31108850 - 31108760
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtga 174  Q
    |||||||||||||||||| |||||||  |||||||| | ||| || |||||||||   |||||||| |||||||||| |||| ||||||||    
T  31108850 cataactcagttggcagggacatgcataattatatgcaggggctggggttcgaacccgagacaccccacttattcaccttgaaaaaggtga 31108760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 185
Target Start/End: Original strand, 16999933 - 17000034
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||||||| ||||||||| ||||||| ||||||||||| |||  |  ||||||||| ||||||||| || ||||||  |||| || |||||||| |||||    
T  16999933 cataactctgttggcagggacatgcattattatatgtaggggccggagttcgaactccagacaccccacatattcatcttgaaaagggtgaattgtagcc 17000032  T
Q  184 ac 185  Q
    ||    
T  17000033 ac 17000034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 183
Target Start/End: Original strand, 32080058 - 32080159
Alignment:
Q  82 aacataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctag 181  Q
    |||||| ||||||| |||||  |||| | ||||||||||| |||| | |||||||||  |  |||||| |||||||||| |||| |||||||||||||||    
T  32080058 aacatagctcagtttgcaggggcatgaattattatatgtatgggtcggggttcgaaccccgaacaccccacttattcaccttgaaaaaggtgaattctag 32080157  T
Q  182 cc 183  Q
    ||    
T  32080158 cc 32080159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 187
Target Start/End: Complemental strand, 49299323 - 49299227
Alignment:
Q  90 tcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    ||||||| |||| |||||||  ||||||||||| || || |||||||||  ||||||| | |||||||||| |||| |||| ||||||||||||||||    
T  49299323 tcagttgacagggacatgcataattatatgtaaaggctggggttcgaacc-cagacactccacttattcaccttgagaaagctgaattctagccacta 49299227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 163
Target Start/End: Complemental strand, 42824076 - 42823996
Alignment:
Q  84 cataactcagttggcaggaaca-tgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcacttt 163  Q
    |||||||||||||||||| ||| | || ||||||||  |||||||| ||||||||  || |||||||||||||||||||||    
T  42824076 cataactcagttggcaggcacaatacattattatatacaagggttggggttcgaatctcggacaccctacttattcacttt 42823996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 19137624 - 19137727
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||||||||||||||||||| | ||||||| | |||  |||||||||||  ||||||||| | |||||| | |||| ||| | ||||||||| |    
T  19137624 catagctcagttggcaggaacatgcattgttatatgcaggggccgaggttcgaaccccagacaccccatttattctccttgaaaaaagagaattctagtc 19137723  T
Q  184 acta 187  Q
    ||||    
T  19137724 acta 19137727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 177
Target Start/End: Original strand, 26365485 - 26365547
Alignment:
Q  114 tatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaatt 177  Q
    |||||||| ||||||| ||||||||| |||||| || |||||||||| ||||||||||||||||    
T  26365485 tatatgtaggggttgatgttcgaactccagacatcccacttattcac-ttgataaaggtgaatt 26365547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 195
Target Start/End: Original strand, 28951871 - 28951982
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||||||||||||||||  ||||||| ||||||||| | ||||   |||||||||  |  |||||| |||||||||| |||| ||| |||||||||| ||    
T  28951871 cataactcagttggcagatacatgcattattatatgcaggggtcagggttcgaaccccgaacaccccacttattcaccttgaaaaatgtgaattctaacc 28951970  T
Q  184 actaaattactt 195  Q
    | ||| ||||||    
T  28951971 attaagttactt 28951982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 163
Target Start/End: Complemental strand, 28226280 - 28226198
Alignment:
Q  82 aacataactcagttggcaggaac-atgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcacttt 163  Q
    ||||||||||||||||||||||| ||||| ||||||||| | |||||| ||||||||   |  |||||| |||||||||||||    
T  28226280 aacataactcagttggcaggaacaatgcattattatatgcaggggttggggttcgaatcccgaacaccccacttattcacttt 28226198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 187
Target Start/End: Complemental strand, 13616166 - 13616063
Alignment:
Q  82 aacataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctag 181  Q
    |||||||||| ||||| ||||  ||||| ||||||||||| |||| |  |||||||| || ||||||| ||||||||| | | || ||||||||||||||    
T  13616166 aacataactcggttggtaggacaatgcattattatatgtaggggtcggagttcgaacctcggacaccccacttattca-tcttat-aaggtgaattctag 13616069  T
Q  182 ccacta 187  Q
    ||||||    
T  13616068 ccacta 13616063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 182
Target Start/End: Original strand, 16985023 - 16985123
Alignment:
Q  82 aacataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctag 181  Q
    ||||||| |||||||||||  |||| || ||||||||||| |||||  |||| |||| ||  |||| | ||||||||||||| | ||| |||||||||||    
T  16985023 aacataattcagttggcagagacattcattattatatgtaggggtttgggtttgaacctcgaacactccacttattcactttaaaaaaagtgaattctag 16985122  T
Q  182 c 182  Q
    |    
T  16985123 c 16985123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 180
Target Start/End: Original strand, 33533208 - 33533304
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattcta 180  Q
    |||||||||||||||||  ||||||| | |||||||||  ||||| |||||||||   ||||| || |||||||||| || | ||| ||||||||||    
T  33533208 cataactcagttggcagagacatgcattgttatatgtagtggttggggttcgaaccatagacatcccacttattcaccttaaaaaaagtgaattcta 33533304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 51017800 - 51017895
Alignment:
Q  89 ctcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccac 185  Q
    ||||||||||||| ||||||| | ||||||| | | || |  ||||||||  | ||||||| ||||||||||||||| ||| |||||||||||||||    
T  51017800 ctcagttggcagggacatgcattgttatatgcaggagtcggagttcgaacc-cggacaccccacttattcactttgaaaaaagtgaattctagccac 51017895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 184
Target Start/End: Complemental strand, 13540049 - 13539956
Alignment:
Q  89 ctcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcca 184  Q
    ||||||||| ||||  ||||| ||||||||||| |||||| |||||||||  | ||||||| ||||||| || || || |||||||||||||||||    
T  13540049 ctcagttggtaggacaatgcattattatatgtaggggttggggttcgaaccccggacaccccacttatttacctt-at-aaggtgaattctagcca 13539956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 21249020 - 21248977
Alignment:
Q  144 acaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    |||||| |||||||||| |||| |||||||||||||||||||||    
T  21249020 acaccccacttattcaccttgaaaaaggtgaattctagccacta 21248977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 24130564 - 24130667
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||||||||||||||||| |||| || | ||||||| | |||  | |||| ||||  | ||||||| |||||||||| |||| |||| ||||| ||||||    
T  24130564 cataactcagttggcagggacatacattgttatatgcaggggacggggtttgaaccccggacaccccacttattcaccttgaaaaagttgaatactagcc 24130663  T
Q  184 acta 187  Q
    ||||    
T  24130664 acta 24130667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 31680737 - 31680839
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||||| | ||| ||||||| | ||||| |||  ||||| |||| ||||||| ||||||| |||||||||| || | ||||||||||| |||||    
T  31680737 catagctcagtttgtagggacatgcattgttatacgtagaggttggggtttgaacttcggacaccccacttattcaccttaa-aaaggtgaattttagcc 31680835  T
Q  184 acta 187  Q
    ||||    
T  31680836 acta 31680839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 31917957 - 31917855
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||||| | ||||||||||| | |||||||||  ||| | | |||||||||| ||||||| |||||||||| || | |||||| |||| |||||    
T  31917957 catagctcagtttgtaggaacatgcattgttatatgtagaggtcgggcttcgaacttcggacaccccacttattcacctt-aaaaaggtaaattttagcc 31917859  T
Q  184 acta 187  Q
    ||||    
T  31917858 acta 31917855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 33206762 - 33206863
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||||||| ||||  ||||| ||||||||| | ||| || |||||||||  | ||||||| |||||||||| || |||| ||||||||||||||    
T  33206762 catagctcagttggtaggacaatgcattattatatgcaggggctggggttcgaaccccggacaccccacttattcacctt-ataa-ggtgaattctagcc 33206859  T
Q  184 acta 187  Q
    ||||    
T  33206860 acta 33206863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 40160740 - 40160843
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| |||| |||||||| ||||||| | |||||||   ||| || |||| ||||  | ||||||| |||||||||| || | |||||||||||||||||    
T  40160740 catagctcaattggcagggacatgcattgttatatgccggggctggggtttgaaccccggacaccccacttattcacctttaaaaaggtgaattctagcc 40160839  T
Q  184 acta 187  Q
    ||||    
T  40160840 acta 40160843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 40786285 - 40786386
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||||||| ||||  ||||| ||||||||| | |||| | ||||||||| |||||| ||| |||||||| |||| |||| ||||||||||| ||    
T  40786285 catagctcagttggtaggacaatgcattattatatgcatgggtcggggttcgaacctcagacgccccacttattctcttt-ataa-ggtgaattctaacc 40786382  T
Q  184 acta 187  Q
    ||||    
T  40786383 acta 40786386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 187
Target Start/End: Original strand, 43774194 - 43774291
Alignment:
Q  89 ctcagttggcaggaaca-tgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    ||||||||||||| ||| |||| | ||||||| | |||| | |||||||||  ||||||||| |||||||||| || |||| ||||||||||||||||||    
T  43774194 ctcagttggcagggacaatgcattgttatatgcaggggtcggggttcgaaccccagacaccccacttattcacctt-ataa-ggtgaattctagccacta 43774291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 187
Target Start/End: Original strand, 50724393 - 50724473
Alignment:
Q  105 atgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    ||||| ||||||||| | |||||| ||||||||| || ||||||| |||||||||| || | ||  |||||||||||||||||    
T  50724393 atgcattattatatgcaggggttggggttcgaacctcggacaccccacttattcaccttaaaaa--gtgaattctagccacta 50724473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 187
Target Start/End: Complemental strand, 50788455 - 50788375
Alignment:
Q  105 atgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    ||||| ||||||||| | |||||| ||||||||| || ||||||| |||||||||| || | ||  |||||||||||||||||    
T  50788455 atgcattattatatgcaggggttggggttcgaacctcggacaccccacttattcaccttaaaaa--gtgaattctagccacta 50788375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 3461814 - 3461760
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaac 138  Q
    ||||||||||||| |||| ||||||| | ||||||||| |||||| |||||||||    
T  3461814 cataactcagttgacagggacatgcattgttatatgtaggggttggggttcgaac 3461760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 195
Target Start/End: Complemental strand, 37707732 - 37707623
Alignment:
Q  85 ataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcca 184  Q
    |||||||||||| |||||| ||| | | ||||||| | |||||| |||||||||  | |||| || ||||||| ||||| | |||||||||||||| | |    
T  37707732 ataactcagttgacaggaatatgaattgttatatgca-gggttggggttcgaaccccggacatccaacttatttactttaaaaaaggtgaattctaacta 37707634  T
Q  185 ctaaattactt 195  Q
    ||| |||||||    
T  37707633 ctagattactt 37707623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 189
Target Start/End: Complemental strand, 16006596 - 16006493
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||||||||||||| || |  ||||| ||| ||||| ||| || | |||||||||  ||||||||| |||||||||| || || ||||||||||||| ||    
T  16006596 cataactcagttggtagaacaatgcattataatatgcaagagtcggggttcgaaccccagacaccccacttattcacctt-at-aaggtgaattctaacc 16006499  T
Q  184 actaaa 189  Q
    ||||||    
T  16006498 actaaa 16006493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 187
Target Start/End: Complemental strand, 21142761 - 21142720
Alignment:
Q  146 accctacttattcactttgataaaggtgaattctagccacta 187  Q
    |||||||||||||||||| | ||||||||||||||| |||||    
T  21142761 accctacttattcactttaaaaaaggtgaattctagtcacta 21142720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 36256723 - 36256668
Alignment:
Q  130 ggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    ||||||||| ||| ||||||||||||||||| || || ||||||||||||||||||||    
T  36256723 ggttcgaacctcatacaccctacttattcacctt-at-aaggtgaattctagccacta 36256668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 36331817 - 36331715
Alignment:
Q  84 cataactcagttggcaggaaca-tgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagc 182  Q
    |||| |||| |||||||| ||| |||| ||||||||| | |||| | |||||||||  | ||||||| |||||||||||||   ||| ||||||||||||    
T  36331817 catagctcaattggcagggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttattcacttt--aaaaagtgaattctagc 36331720  T
Q  183 cacta 187  Q
    |||||    
T  36331719 cacta 36331715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 43897634 - 43897683
Alignment:
Q  111 tattatatgtaagggttgaggttcgaacttcagacaccctacttattcac 160  Q
    ||||||||||| || |||| |||||||| |||||||||| ||||||||||    
T  43897634 tattatatgtagggattgatgttcgaacctcagacaccccacttattcac 43897683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 188
Target Start/End: Complemental strand, 20623867 - 20623765
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||||||||||| | ||||  ||||| ||||||||||| || |   ||||||||||   ||||||| |||||||||| || |||| ||||||||||||||    
T  20623867 cataactcagtttgtaggacaatgcattattatatgtagggatcagggttcgaactcaggacaccccacttattcacctt-ataa-ggtgaattctagcc 20623770  T
Q  184 actaa 188  Q
    |||||    
T  20623769 actaa 20623765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 24890073 - 24890149
Alignment:
Q  79 gtaaacataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctactta 155  Q
    |||| ||||||||||||| || | ||||||| | ||||||||| |||||| ||||||||| || || |||| |||||    
T  24890073 gtaagcataactcagttgacaaggacatgcattgttatatgtaggggttggggttcgaacctcggaaaccccactta 24890149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 163
Target Start/End: Original strand, 44976578 - 44976657
Alignment:
Q  84 cataactcagttggcaggaaca-tgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcacttt 163  Q
    ||||||||||||| |||| ||| |||| ||||||||||||| || |  |||||||| || ||||||| |||||||||||||    
T  44976578 cataactcagttgacagggacaatgcattattatatgtaagagtcggagttcgaacctcggacaccc-acttattcacttt 44976657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 188
Target Start/End: Original strand, 48173291 - 48173393
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||||||| | ||  ||||| ||||||||||| ||||||  ||||||||  | ||||||  |||||||||| || || ||||||||||||||||    
T  48173291 catagctcagttggtaagacaatgcattattatatgtatgggttggagttcgaaccccggacacctcacttattcacctt-at-aaggtgaattctagcc 48173388  T
Q  184 actaa 188  Q
    |||||    
T  48173389 actaa 48173393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 49639033 - 49639134
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||||||| ||||  ||||| ||||||||||| |||  | |||||||||  |  |||||| |||||||||| |||   ||||||||||||||||    
T  49639033 catagctcagttggtaggacaatgcattattatatgtaggggccggggttcgaaccccgaacaccccacttattcaccttg--taaggtgaattctagcc 49639130  T
Q  184 acta 187  Q
    ||||    
T  49639131 acta 49639134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 163
Target Start/End: Original strand, 52030125 - 52030205
Alignment:
Q  84 cataactcagttggcaggaaca-tgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcacttt 163  Q
    |||||||||||||||||| ||| || | ||||||||| | |||  | |||||||||  | |||||||||||||||||||||    
T  52030125 cataactcagttggcagggacaatgtattattatatgcaggggccggggttcgaaccccggacaccctacttattcacttt 52030205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 197
Target Start/End: Original strand, 40384275 - 40384369
Alignment:
Q  103 acatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccactaaattacttaa 197  Q
    ||||||| ||||||||| |  || || |||||||||| | ||||||| |||||||||| || | ||||||||||||||||||||||| |||||||    
T  40384275 acatgcattattatatgcagcggctggggttcgaactccggacaccccacttattcaccttaaaaaaggtgaattctagccactaaactacttaa 40384369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 198
Target Start/End: Complemental strand, 11246584 - 11246470
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||||||||||| ||||||| | ||||||| | |||| | || || |||  |||||| || |||||||||  |||| |||||||||||||||||    
T  11246584 catagctcagttggcagggacatgcattgttatatgcaggggtcggggctcaaaccccagacatcccacttattcagcttgaaaaaggtgaattctagcc 11246485  T
Q  184 actaaattacttaac 198  Q
    |||| | ||||||||    
T  11246484 actagactacttaac 11246470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 24653148 - 24653223
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcac 160  Q
    |||||||||||||||| | ||||||| ||||||||| | |||||| |||||||| ||||||||| | ||||||||||    
T  24653148 cataactcagttggcaag-acatgcattattatatgcaggggttggggttcgaatttcagacactccacttattcac 24653223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 187
Target Start/End: Original strand, 6291040 - 6291103
Alignment:
Q  124 ggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    |||||||||||||||  ||||||||| | |||||||| |||| |||||||||||||| ||||||    
T  6291040 ggttgaggttcgaaccccagacaccccatttattcacattgaaaaaggtgaattctaaccacta 6291103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 28537140 - 28537243
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    ||||||||| ||| || | ||||||| | ||||||| | |||  | |||||||||  | ||||||| ||||||||||||||| || ||||||||||||||    
T  28537140 cataactcaattgacatggacatgcattgttatatgcatgggccggggttcgaaccccggacaccccacttattcactttgaaaatggtgaattctagcc 28537239  T
Q  184 acta 187  Q
    ||||    
T  28537240 acta 28537243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 32253011 - 32252916
Alignment:
Q  82 aacataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaatt 177  Q
    |||||| ||||||||  | | ||||||| ||||||||||| |||| | |||||||||  ||||||||| | ||||||||||||| ||| |||||||    
T  32253011 aacatagctcagttgataaggacatgcattattatatgtaggggtcggggttcgaaccccagacacccaatttattcactttgaaaaatgtgaatt 32252916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 35813332 - 35813230
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| |||||||| |||| ||||||| | ||||||| | ||| | ||||||||||    ||||||| |||||||| |||||| |||||||||||||||||    
T  35813332 catagctcagttgacagggacatgcattgttatatgcaggggctcaggttcgaacccaggacaccccacttattc-ctttgaaaaaggtgaattctagcc 35813234  T
Q  184 acta 187  Q
    ||||    
T  35813233 acta 35813230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 38040271 - 38040373
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||||||||||| ||||||| | ||||||| | |||| ||||||||||| || |||| || |||||||||  |||| ||||||||||| ||| |    
T  38040271 catagctcagttggcagggacatgcattgttatatgcaggggtcgaggttcgaac-tcggacatcccacttattcatcttgaaaaaggtgaattatagtc 38040369  T
Q  184 acta 187  Q
    ||||    
T  38040370 acta 38040373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 24651168 - 24651222
Alignment:
Q  111 tattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttga 165  Q
    ||||||||||| |||||| ||||||||||||||||| || |||||||||| ||||    
T  24651168 tattatatgtaggggttggggttcgaacttcagacatcccacttattcacattga 24651222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 191
Target Start/End: Complemental strand, 27278822 - 27278736
Alignment:
Q  106 tgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgata-aaggtgaattctagccactaaatt 191  Q
    |||| ||||||||||| |||| | ||||||||| |||||||||| | |||||||||||  || ||||||||||||| ||| ||||||    
T  27278822 tgcattattatatgtaggggtcggggttcgaacctcagacaccccatttattcactttcttataaggtgaattctaaccattaaatt 27278736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 41405172 - 41405078
Alignment:
Q  90 tcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcca 184  Q
    ||||||| |||| ||||||| | ||||||| |||||| | |||| ||||  ||||||| | | ||||||||||||| ||||||||||| ||||||    
T  41405172 tcagttgacagggacatgcattgttatatgcaagggtcggggttggaaccgcagacactccaattattcactttgaaaaaggtgaattttagcca 41405078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 5891084 - 5891133
Alignment:
Q  111 tattatatgtaagggttgaggttcgaacttcagacaccctacttattcac 160  Q
    |||||||||||||||||| |||||||||||| ||||||| ||| ||||||    
T  5891084 tattatatgtaagggttggggttcgaacttcggacaccccactcattcac 5891133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 5156901 - 5157003
Alignment:
Q  84 cataactcagttggcaggaaca-tgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagc 182  Q
    |||| |||||||| || ||||| |||| | ||||||| ||||||  ||||||||||   ||||||||||||||||||| || || |||||||||||||||    
T  5156901 catagctcagttgacatgaacaatgcattgttatatgcaagggtcaaggttcgaaccctagacaccctacttattcacctt-at-aaggtgaattctagc 5156998  T
Q  183 cacta 187  Q
    |||||    
T  5156999 cacta 5157003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 163
Target Start/End: Complemental strand, 6447571 - 6447491
Alignment:
Q  84 cataactcagttggcaggaaca-tgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcacttt 163  Q
    |||||||||||||||||| ||| |||| ||||||||| | |||  | ||||||||| || ||||||| |||||||||||||    
T  6447571 cataactcagttggcagggacaatgcattattatatgcaggggccggggttcgaacctcggacaccccacttattcacttt 6447491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 184
Target Start/End: Complemental strand, 7147109 - 7147009
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||||||| | | ||||||| ||||||||| | |||| | ||||||||| || ||||||  | ||||| || |||| |||||||||||||||||    
T  7147109 catagctcagttggtaaggacatgcattattatatgcaggggtcggggttcgaacctctgacacctcatttatttacattgaaaaaggtgaattctagcc 7147010  T
Q  184 a 184  Q
    |    
T  7147009 a 7147009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 187
Target Start/End: Original strand, 9963425 - 9963522
Alignment:
Q  89 ctcagttggcaggaaca-tgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    ||||||||||||| ||| |||| | ||||||| | |||||| |||||||||||| ||| ||| |||||||||| || ||||| |||||||||| ||||||    
T  9963425 ctcagttggcagggacaatgcattgttatatgcaggggttggggttcgaacttcggaccccccacttattcacctt-ataaa-gtgaattctaaccacta 9963522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 184
Target Start/End: Original strand, 14487567 - 14487664
Alignment:
Q  85 ataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcca 184  Q
    |||| |||||||| ||||  ||||| ||||||||||| |||||| ||||||||| || || | || |||||||||| || || |||||||||||||||||    
T  14487567 ataattcagttggtaggacaatgcattattatatgtaggggttggggttcgaacctcggatatcccacttattcacctt-at-aaggtgaattctagcca 14487664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 187
Target Start/End: Original strand, 20186876 - 20186972
Alignment:
Q  89 ctcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    ||||||||||||| ||||||| ||||||||| | |||| | ||||  |||  ||||||||| |||||||||| |||| ||| ||||||| || ||||||    
T  20186876 ctcagttggcagggacatgcattattatatgcaggggtcggggtt--aaccccagacaccccacttattcaccttgaaaaaagtgaattataaccacta 20186972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 193
Target Start/End: Original strand, 29144149 - 29144254
Alignment:
Q  86 taactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccac 185  Q
    |||||||||||| ||||  ||||| ||||||||| | |||| | |||| ||||| ||||||||| | |||||||| || || ||||||||||||| ||||    
T  29144149 taactcagttggtaggacaatgcattattatatgcaggggtcggggtttgaactccagacaccccatttattcacgtt-at-aaggtgaattctaaccac 29144246  T
Q  186 taaattac 193  Q
    || |||||    
T  29144247 tagattac 29144254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 31556823 - 31556926
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| |||| || ||||| ||||||| | ||||||| | |||| |  ||||||||  | ||||||| |||||||||| |||| || ||||||||||||||    
T  31556823 catagctcacttagcagggacatgcattgttatatgcaggggtcggagttcgaaccccggacaccccacttattcaccttgaaaagggtgaattctagcc 31556922  T
Q  184 acta 187  Q
    ||||    
T  31556923 acta 31556926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 119
Target Start/End: Complemental strand, 33756353 - 33756314
Alignment:
Q  80 taaacataactcagttggcaggaacatgcactattatatg 119  Q
    ||||||||||||||||||||||||||| || |||||||||    
T  33756353 taaacataactcagttggcaggaacatacattattatatg 33756314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 183
Target Start/End: Complemental strand, 4666515 - 4666439
Alignment:
Q  105 atgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    ||||| ||||||||| |||||| |||||||||| ||| ||||| | | ||||||||||| || ||||||||||||||||    
T  4666515 atgcattattatatgcaagggtcgaggttcgaatttcggacacacaatttattcacttt-at-aaggtgaattctagcc 4666439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 197
Target Start/End: Original strand, 18405482 - 18405532
Alignment:
Q  147 ccctacttattcactttgataaaggtgaattctagccactaaattacttaa 197  Q
    ||||||||||||||||||| ||| |||||||||||||| |||  |||||||    
T  18405482 ccctacttattcactttgaaaaatgtgaattctagccattaatctacttaa 18405532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 186
Target Start/End: Original strand, 30119963 - 30120065
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| |||||||| || | ||||||| ||||||| ||   ||||| |||||||| ||| ||||||  ||||||||||||| | || ||| ||||||||||    
T  30119963 catagctcagttgacaaggacatgcattattatacgttgaggttggggttcgaatttcggacacctcacttattcactttaaaaatggtaaattctagcc 30120062  T
Q  184 act 186  Q
    |||    
T  30120063 act 30120065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 160
Target Start/End: Complemental strand, 31934967 - 31934889
Alignment:
Q  82 aacataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcac 160  Q
    |||||||||||||||| ||||  ||||| ||||||||| |  | |||||||||||| ||| ||||||| | ||||||||    
T  31934967 aacataactcagttggtaggacaatgcattattatatgcagagattgaggttcgaatttcggacaccccatttattcac 31934889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 187
Target Start/End: Complemental strand, 38426844 - 38426751
Alignment:
Q  90 tcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    |||||||| ||||  ||||| ||||||||||| ||| ||||||| ||||  |||||||| |||||||||||||| |||||  ||||||||| ||||||    
T  38426844 tcagttggtaggataatgcattattatatgta-gggctgaggtttgaaccccagacaccttacttattcacttt-ataaa--tgaattctaaccacta 38426751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 193
Target Start/End: Complemental strand, 20945981 - 20945874
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    ||||||||| |||| ||||  ||||| ||||||||| | |||  | |||||||| | | ||||||| |||||||||| || |||| ||||||||||||||    
T  20945981 cataactcaattggtaggacaatgcattattatatgcaggggccggggttcgaaatccggacaccccacttattcacctt-ataa-ggtgaattctagcc 20945884  T
Q  184 actaaattac 193  Q
    |||| |||||    
T  20945883 actagattac 20945874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 187
Target Start/End: Original strand, 21360440 - 21360503
Alignment:
Q  122 agggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    |||||||||||||||| | ||||||||| ||||||| || || ||||| |||||||||||||||||    
T  21360440 agggttgaggttcgaattccagacaccccacttatttacctt-ataaa-gtgaattctagccacta 21360503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 27006391 - 27006444
Alignment:
Q  130 ggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||||||||| | ||||| | |||||||||| |||| |||||||||||||||||    
T  27006391 ggttcgaactccggacactccacttattcaccttgaaaaaggtgaattctagcc 27006444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 186
Target Start/End: Original strand, 33599919 - 33600016
Alignment:
Q  89 ctcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccact 186  Q
    |||||||||||| |||||||| |||||||| || | |||| ||||||||   | |||| || |||||||||| || | |||||| ||||| |||||||    
T  33599919 ctcagttggcagaaacatgcattattatatataggagttggggttcgaatcccggacatcccacttattcaccttaaaaaaggtaaattccagccact 33600016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 187
Target Start/End: Original strand, 33729785 - 33729884
Alignment:
Q  86 taactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccac 185  Q
    |||||||||||| ||||  ||||| ||||||||| | |||  | ||||||||  |||||||||| |||||||||| || || ||||||||||||| ||||    
T  33729785 taactcagttggtaggacaatgcattattatatgcaggggccggggttcgaatctcagacaccccacttattcacctt-at-aaggtgaattctaaccac 33729882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 184
Target Start/End: Original strand, 10106635 - 10106735
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||||||||||| |||| || ||||||||||| |||   | ||||||||  | ||||||| |||||||||  |||| |||||  ||||||||||    
T  10106635 catagctcagttggcagggacatccattattatatgtaggggccaaagttcgaaccccggacaccccacttattcatcttgaaaaaggcaaattctagcc 10106734  T
Q  184 a 184  Q
    |    
T  10106735 a 10106735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 159
Target Start/End: Original strand, 13754006 - 13754086
Alignment:
Q  79 gtaaacataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattca 159  Q
    ||||||||||||||||||| ||||  || || ||||||||| | |||| || |||||||| || ||||||| | |||||||    
T  13754006 gtaaacataactcagttggtaggacaatacattattatatgcaggggtcgatgttcgaacgtcggacaccccatttattca 13754086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 33800898 - 33800974
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcac 160  Q
    |||||||||||||| ||||  ||||| ||||||||| | |||  | |||||||||  ||||||||| ||||||||||    
T  33800898 cataactcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccagacaccccacttattcac 33800974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 187
Target Start/End: Complemental strand, 37986890 - 37986854
Alignment:
Q  151 acttattcactttgataaaggtgaattctagccacta 187  Q
    |||||||||| |||| |||||||||||||||||||||    
T  37986890 acttattcaccttgaaaaaggtgaattctagccacta 37986854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 38977354 - 38977318
Alignment:
Q  144 acaccctacttattcactttgataaaggtgaattcta 180  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  38977354 acacccgacttattcactttgaaaaaggtgaattcta 38977318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 180
Target Start/End: Complemental strand, 40250267 - 40250171
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattcta 180  Q
    |||| |||||||||||| |||||||| | ||||||| | | || | ||||||||| ||  ||||||||||||||| | |||| ||| | ||||||||    
T  40250267 catagctcagttggcagtaacatgcattgttatatgcaggagtcggggttcgaacctcgaacaccctacttattctcattgaaaaaagagaattcta 40250171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 187
Target Start/End: Original strand, 41539338 - 41539422
Alignment:
Q  103 acatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    |||||||  |||||||| | ||||||  ||||||||  ||||||||| ||||||| |  |||| ||||||||||||||| |||||    
T  41539338 acatgcataattatatgcaggggttgtagttcgaaccccagacaccccacttattaatcttgaaaaaggtgaattctagtcacta 41539422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 147
Target Start/End: Original strand, 42885864 - 42885900
Alignment:
Q  111 tattatatgtaagggttgaggttcgaacttcagacac 147  Q
    |||||||||||||||||| |||||||||| |||||||    
T  42885864 tattatatgtaagggttggggttcgaactccagacac 42885900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 187
Target Start/End: Original strand, 440409 - 440507
Alignment:
Q  89 ctcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcag-acaccctacttattcactttgataaaggtgaattctagccacta 187  Q
    ||||||||||||||||||||| ||||||||||| |||  | |||||| ||| | | |||||| |||||||||| || | |||||||||||||| ||||||    
T  440409 ctcagttggcaggaacatgcattattatatgtaggggccggggttcg-actcccgaacaccccacttattcaccttaaaaaaggtgaattctaaccacta 440507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 180
Target Start/End: Complemental strand, 19487 - 19389
Alignment:
Q  82 aacataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattcta 180  Q
    ||||||| | |||||||| | ||||||| | ||||||||| |||||| || | |||| || ||||||  | ||||||||||||| ||||||||||||||    
T  19487 aacataatttagttggcacggacatgcattgttatatgtaggggttggggattgaacctcggacacctcatttattcactttgaaaaaggtgaattcta 19389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 188
Target Start/End: Original strand, 67166 - 67270
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||||||| ||| | ||||| | ||||||||| ||| || |||||||||    ||||||| ||||| |||| |||| ||| |||||||||||||    
T  67166 catagctcagttgggagggatatgcattgttatatgtaggggctggggttcgaaccctggacaccccacttaatcaccttgaaaaaagtgaattctagcc 67265  T
Q  184 actaa 188  Q
    |||||    
T  67266 actaa 67270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 197
Target Start/End: Complemental strand, 30983 - 30875
Alignment:
Q  91 cagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttc-agacaccctacttattcacttt-gataaaggtgaattctagccactaa 188  Q
    ||||||||||| ||||||| ||||||||| | ||||||  ||||||||  | |||||||  |||||||||||||  | ||||||||||||||  ||||||    
T  30983 cagttggcagggacatgcagtattatatgcaggggttggagttcgaaccactagacacctcacttattcactttaaaaaaaggtgaattctaatcactaa 30884  T
Q  189 attacttaa 197  Q
    | |||||||    
T  30883 actacttaa 30875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 192
Target Start/End: Original strand, 8586 - 8671
Alignment:
Q  105 atgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccactaaatta 192  Q
    ||||| ||||||||||| |||||| |||||||||  |  ||||||||||||||||| || || || |||||||||| |||||||||||    
T  8586 atgcattattatatgtaggggttggggttcgaaccccgaacaccctacttattcacctt-at-aatgtgaattctaaccactaaatta 8671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 34123 - 34020
Alignment:
Q  84 cataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagcc 183  Q
    |||| ||||||||||||| ||||||| | ||||||| | |||  | |||||||| | | ||||| | |||||||| |||| | ||||| |||||||||||    
T  34123 catagctcagttggcagggacatgcattgttatatgcaggggccggggttcgaattccggacactccacttattctctttaaaaaaggagaattctagcc 34024  T
Q  184 acta 187  Q
    ||||    
T  34023 acta 34020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 137
Target Start/End: Complemental strand, 245548 - 245493
Alignment:
Q  82 aacataactcagttggcaggaacatgcactattatatgtaagggttgaggttcgaa 137  Q
    ||||||||||||||||||||||| |||||| ||||||| | |||| | ||||||||    
T  245548 aacataactcagttggcaggaacgtgcactgttatatgcaggggtcggggttcgaa 245493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 194
Target Start/End: Original strand, 62726 - 62828
Alignment:
Q  92 agttggcaggaacatgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcactttgataaaggtgaattctagccactaaatt 191  Q
    ||||||||  |||||| | |||||||| || |||||| ||||||||| || |||| || |||||||||  || | ||| |||||||||||| ||||| ||    
T  62726 agttggcacaaacatgtattattatatataggggttggggttcgaacatcggacaacccacttattcatcttaaaaaaagtgaattctagctactaagtt 62825  T
Q  192 act 194  Q
    |||    
T  62826 act 62828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 163
Target Start/End: Complemental strand, 108452 - 108372
Alignment:
Q  84 cataactcagttggcaggaaca-tgcactattatatgtaagggttgaggttcgaacttcagacaccctacttattcacttt 163  Q
    |||| |||| |||||||||||| |||| ||||||||| | ||| |||||||| |||  | ||||||| |||||||||||||    
T  108452 catagctcaattggcaggaacaatgcattattatatgcaggggctgaggttcaaaccccggacaccccacttattcacttt 108372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 187
Target Start/End: Original strand, 25463 - 25499
Alignment:
Q  151 acttattcactttgataaaggtgaattctagccacta 187  Q
    ||||||||||||||| |||||||||||||| ||||||    
T  25463 acttattcactttgaaaaaggtgaattctaaccacta 25499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University