View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6019_high_60 (Length: 244)
Name: NF6019_high_60
Description: NF6019
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6019_high_60 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 33283142 - 33282899
Alignment:
| Q |
1 |
tgaaatgaaaattatgaaactgtttctgcaataggaggaggatatccttaaacctccttataactttccctctttgacacaacttggaccccatacatct |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33283142 |
tgaaatgaaaattatgaaactgtttctgcaataggaggaggatatccttaaacctccttataactttccctctttgacacaacttggaccccatacatct |
33283043 |
T |
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| Q |
101 |
gaatggacaagatcaaaaggaaaatttgcttgatgaagaattgtgcttgcaaaagtagctcgaacttgtctaccgagctgacatgattgacactccaagg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33283042 |
gaatggacaagatcaaaaggaaaatttgcttgatgaagaattgtgcttgcaaaagtagctcgaacttgtctaccgagctgacatgattgacactccaagg |
33282943 |
T |
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| Q |
201 |
gctgcaactagcaaagccttgggaccatctataattattaagtt |
244 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33282942 |
gctgcaactagcaaagccttgggaccatctataattattaagtt |
33282899 |
T |
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