View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6019_low_1 (Length: 1164)

Name: NF6019_low_1
Description: NF6019
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6019_low_1
NF6019_low_1
[»] chr4 (20 HSPs)
chr4 (10-881)||(43615423-43616311)
chr4 (899-1096)||(43616354-43616551)
chr4 (799-851)||(55936068-55936120)
chr4 (800-851)||(24798209-24798260)
chr4 (1114-1149)||(43616553-43616588)
chr4 (799-851)||(19934719-19934771)
chr4 (799-851)||(29006842-29006894)
chr4 (799-851)||(32599561-32599613)
chr4 (799-851)||(47181566-47181618)
chr4 (799-851)||(52914079-52914131)
chr4 (799-851)||(54164894-54164946)
chr4 (800-851)||(24133680-24133731)
chr4 (796-851)||(30938910-30938965)
chr4 (799-850)||(48402492-48402543)
chr4 (801-851)||(31933654-31933704)
chr4 (794-847)||(2582819-2582872)
chr4 (794-851)||(6975009-6975066)
chr4 (794-851)||(21142097-21142154)
chr4 (794-851)||(34616291-34616348)
chr4 (794-851)||(38382052-38382109)
[»] chr1 (16 HSPs)
chr1 (794-849)||(28038903-28038958)
chr1 (799-851)||(34953903-34953955)
chr1 (797-851)||(15290657-15290711)
chr1 (794-851)||(9676042-9676099)
chr1 (786-851)||(50308696-50308761)
chr1 (799-851)||(2122650-2122702)
chr1 (799-851)||(14967306-14967358)
chr1 (799-851)||(24981922-24981974)
chr1 (799-851)||(46906868-46906920)
chr1 (799-846)||(33765868-33765915)
chr1 (797-851)||(6156641-6156695)
chr1 (797-851)||(50308635-50308689)
chr1 (790-851)||(3906833-3906894)
chr1 (794-851)||(38834618-38834675)
chr1 (799-852)||(39420324-39420377)
chr1 (799-844)||(41007691-41007736)
[»] chr8 (14 HSPs)
chr8 (794-851)||(17871839-17871896)
chr8 (786-851)||(17986262-17986327)
chr8 (794-851)||(13841855-13841912)
chr8 (799-851)||(10934684-10934736)
chr8 (799-851)||(13964426-13964478)
chr8 (799-851)||(27502908-27502960)
chr8 (799-851)||(41753765-41753817)
chr8 (797-847)||(17871774-17871824)
chr8 (797-851)||(26998676-26998730)
chr8 (797-847)||(26998748-26998798)
chr8 (786-851)||(37288563-37288629)
chr8 (794-851)||(24471191-24471248)
chr8 (794-851)||(31271608-31271665)
chr8 (794-851)||(44319605-44319662)
[»] chr6 (10 HSPs)
chr6 (799-851)||(12104752-12104804)
chr6 (797-851)||(3203750-3203804)
chr6 (797-851)||(16121044-16121098)
chr6 (790-851)||(14218204-14218265)
chr6 (794-851)||(31996575-31996632)
chr6 (797-849)||(11174058-11174110)
chr6 (790-849)||(11745932-11745992)
chr6 (799-847)||(15517171-15517219)
chr6 (799-851)||(34379816-34379868)
chr6 (794-851)||(6797444-6797501)
[»] chr3 (15 HSPs)
chr3 (799-851)||(10872679-10872731)
chr3 (799-851)||(20625246-20625298)
chr3 (799-851)||(24722694-24722746)
chr3 (785-851)||(39579560-39579626)
chr3 (799-851)||(22496958-22497010)
chr3 (799-851)||(24694235-24694287)
chr3 (799-851)||(37897763-37897815)
chr3 (799-851)||(40639790-40639842)
chr3 (799-851)||(40639876-40639928)
chr3 (799-851)||(50603594-50603646)
chr3 (799-851)||(51253677-51253729)
chr3 (799-851)||(54595797-54595849)
chr3 (797-847)||(29241491-29241541)
chr3 (794-851)||(7882288-7882345)
chr3 (794-851)||(8036543-8036600)
[»] chr7 (10 HSPs)
chr7 (797-851)||(34478314-34478368)
chr7 (799-851)||(43103079-43103131)
chr7 (799-851)||(2943219-2943271)
chr7 (799-851)||(23818431-23818483)
chr7 (799-851)||(25245224-25245276)
chr7 (797-849)||(28752158-28752210)
chr7 (799-849)||(4089138-4089188)
chr7 (801-847)||(12088822-12088868)
chr7 (803-845)||(31814718-31814760)
chr7 (799-848)||(21586824-21586873)
[»] chr2 (19 HSPs)
chr2 (799-851)||(3121429-3121481)
chr2 (786-845)||(5559497-5559556)
chr2 (797-851)||(5559436-5559490)
chr2 (797-851)||(7650197-7650251)
chr2 (794-851)||(19268067-19268124)
chr2 (790-851)||(26003442-26003503)
chr2 (794-851)||(41056895-41056952)
chr2 (799-851)||(1961390-1961442)
chr2 (799-851)||(4563945-4563997)
chr2 (799-847)||(23378023-23378071)
chr2 (799-851)||(31024178-31024230)
chr2 (799-847)||(38181771-38181819)
chr2 (797-851)||(23143493-23143547)
chr2 (797-851)||(23555283-23555337)
chr2 (794-847)||(3098137-3098190)
chr2 (794-851)||(13333454-13333511)
chr2 (794-851)||(15446854-15446911)
chr2 (794-847)||(15916744-15916797)
chr2 (794-851)||(25270863-25270920)
[»] chr5 (15 HSPs)
chr5 (797-847)||(23262513-23262563)
chr5 (794-851)||(7613365-7613422)
chr5 (794-851)||(10437713-10437770)
chr5 (794-851)||(13654584-13654641)
chr5 (799-851)||(4967721-4967773)
chr5 (797-851)||(4297276-4297330)
chr5 (799-849)||(15311939-15311989)
chr5 (797-851)||(25694194-25694248)
chr5 (794-847)||(32911480-32911534)
chr5 (794-851)||(32911568-32911626)
chr5 (801-851)||(40100094-40100144)
chr5 (794-851)||(14107536-14107593)
chr5 (794-851)||(17625716-17625773)
chr5 (794-851)||(22227057-22227114)
chr5 (794-847)||(41005679-41005732)
[»] scaffold0149 (1 HSPs)
scaffold0149 (799-851)||(24687-24739)
[»] scaffold0020 (1 HSPs)
scaffold0020 (802-851)||(139303-139352)


Alignment Details
Target: chr4 (Bit Score: 680; Significance: 0; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 680; E-Value: 0
Query Start/End: Original strand, 10 - 881
Target Start/End: Original strand, 43615423 - 43616311
Alignment:
Q  10 acatcatcatcaattcaatgggatgacctataccatgctatgctatagggttgagacaaatacgttagacatggacttcaatttgtaaaggccccaccaa 109  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43615423 acatcatcattaattcaatgggatgacctataccatgctatgctatagggttgagacaaatacgttagacatggacttcaatttgtaaaggccccaccaa 43615522  T
Q  110 gtatatactccaacagatatttttcactacagaagnnnnnnnnn---atttaacagaaaaaacacatgttacaagtatatgaaaaagtattcggagaatg 206  Q
    |||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  43615523 gtatatactccaacagatatttttcactacagaagttttttttttttatttaacagaaaaaacacatgttacaagtacatgaaaaggtattcggagaatg 43615622  T
Q  207 ctaacgagtatcattaagatattgattaaagtgttaaaataagtaaatttgctaacataaaagtgaaaaattatatttataaaacaaagtttttagtatt 306  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || |    
T  43615623 ctaacgagtatcattaagatattaattaaagtgttaaaataagtaaatttactaacataaaagtgaaaaattatatttataaaacaaaatttttactaat 43615722  T
Q  307 gaattt-ttaagggcattgattaacgaaacccaaaatataaat-attcggctacatttgagactcattgggg-cggccaaatattgtaaagaatactatc 403  Q
    |||||| |||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  43615723 gaatttcttaaaggcattgattaacgaaacccaaaatataaaccattcggctacatttgagactcattgggggcggccaaatattgtaaagaatactatc 43615822  T
Q  404 tctcaaaacccaaggagcactttcagtcataatagtcttttggtcatggcaaggctaagcctttgattctgtatgtg------tcacatggctctcactg 497  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||      |||||||||||||||||    
T  43615823 tctcaaaacccaaggagcactttcactcataatagtcttttggtcatggcaaggctaagcttttgattctgtatgtgcatcagtcacatggctctcactg 43615922  T
Q  498 cattaggtattcttccaagaatgctactagtactattgtttctttatactatgcattgtgctcctaaaacacattgaattttgaataatgatgtttatct 597  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  43615923 tattaggtattcttccaagaatgctactagtactattgtttctttatactatgcattgtgctcctaaaacacattgatttttgaataatgatgtttatct 43616022  T
Q  598 ttagtttttcaacatctcgttctctcttatctctttcatttaaatacagcattctctctatttctatcacgtgtggaaaagctgtatgagcgtctatcaa 697  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  43616023 ttagtttttcaacatctcgttctctcttatctctttcatttaattacatcattctctctatttctatcacgtgtgaaaaagctgtatcagcgtctatcaa 43616122  T
Q  698 atattttctttaattttaagtgttttaagttaacagctacctttttatttctatctcgaggaacataacaattacactaatactccgttaac--atatac 795  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||  ||||||    
T  43616123 atattttctttaattttaagtgttttaagttaacagttacctttttatttctatctcggggaacataacaattacactaatactccattaacatatatac 43616222  T
Q  796 taaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga---gatggagtaaacagtttaaattttgtgtgc 881  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||   ||||||||||||| |||||||||| |||||    
T  43616223 taaatacatcatttaataaatgaatttaaaaaattgatttttgcttataatagtgattggatggagtaaacaatttaaattttatgtgc 43616311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 162; E-Value: 7e-86
Query Start/End: Original strand, 899 - 1096
Target Start/End: Original strand, 43616354 - 43616551
Alignment:
Q  899 ttaagtgatgaaatcaatgcgggtgtgtcgtcactttacaaaagactatttttaaaatatgacgtgaacattgatttcatttaataaaatagtgaatttg 998  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || | ||| ||||||||||||||||||||||||||||||    
T  43616354 ttaagtgatgaaatcaatgcgggtgtatcgtcactttacaaaagactatttttaaaatataacatcaacgttgatttcatttaataaaatagtgaatttg 43616453  T
Q  999 aaaaatgtagtgtttctaatcctcctcaaatcaaccaattacaagtaatattgtagcattttctataatattaaaaatgataaatgctaacatgtact 1096  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||    
T  43616454 aaaaatgtagtgtttctaatcctcctcaaatcaacaaattacaagtaatattatagcgttttctataatattaaaaatgataaatgctaagatgtact 43616551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 799 - 851
Target Start/End: Original strand, 55936068 - 55936120
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||||| ||||||| ||||| |||||| |||||||||||||||||    
T  55936068 atacatcatttaatgaatgaatctaaaatattgatttttgcttataatagtga 55936120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 800 - 851
Target Start/End: Original strand, 24798209 - 24798260
Alignment:
Q  800 tacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    ||||||||||||| ||||||||||||| ||| || |||||||||||||||||    
T  24798209 tacatcatttaatgaatgaatttaaaatattaatttttgcttataatagtga 24798260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1114 - 1149
Target Start/End: Original strand, 43616553 - 43616588
Alignment:
Q  1114 cgggcatatgttaacaaagaccctccctgttgaaaa 1149  Q
    ||||||||||||||||||||||||||||||||||||    
T  43616553 cgggcatatgttaacaaagaccctccctgttgaaaa 43616588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 799 - 851
Target Start/End: Original strand, 19934719 - 19934771
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||| | ||||||| |||||||| ||| |||||||||||||||||    
T  19934719 atacatcatttattgaatgaatctaaaaaatagatttttgcttataatagtga 19934771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 799 - 851
Target Start/End: Complemental strand, 29006894 - 29006842
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||| | ||||||| |||||||| ||| |||||||||||||||||    
T  29006894 atacatcatttattgaatgaatctaaaaaatagatttttgcttataatagtga 29006842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 799 - 851
Target Start/End: Original strand, 32599561 - 32599613
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||||||||||||| ||||| ||| || ||| |||||||||||||    
T  32599561 atacatcatttaataaatgaatctaaaatattaatttttacttataatagtga 32599613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 799 - 851
Target Start/End: Complemental strand, 47181618 - 47181566
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||||| |||||||||||||  | ||| |||||||||||||||||    
T  47181618 atacatcatttaatgaatgaatttaaaatgtagatttttgcttataatagtga 47181566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 799 - 851
Target Start/End: Original strand, 52914079 - 52914131
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||||| ||||||| ||||| ||| || |||||||||||||||||    
T  52914079 atacatcatttaatgaatgaatctaaaatattaatttttgcttataatagtga 52914131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 799 - 851
Target Start/End: Original strand, 54164894 - 54164946
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||| | ||||||| |||||||| ||| |||||||||||||||||    
T  54164894 atacatcatttattgaatgaatctaaaaaatagatttttgcttataatagtga 54164946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 800 - 851
Target Start/End: Original strand, 24133680 - 24133731
Alignment:
Q  800 tacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    ||||||| ||||||||||||||||||| ||| || |||| ||||||||||||    
T  24133680 tacatcaattaataaatgaatttaaaatattaatttttgattataatagtga 24133731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 796 - 851
Target Start/End: Complemental strand, 30938965 - 30938910
Alignment:
Q  796 taaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||  |||| |||||||||||||||| ||||| ||| |||||||||||||    
T  30938965 taaatacattgtttattaaatgaatttaaaaagttgatttttccttataatagtga 30938910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 799 - 850
Target Start/End: Original strand, 48402492 - 48402543
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtg 850  Q
    |||||||||||||| ||||||| ||||| || ||| ||||||||||||||||    
T  48402492 atacatcatttaatgaatgaatctaaaatatagatttttgcttataatagtg 48402543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 801 - 851
Target Start/End: Complemental strand, 31933704 - 31933654
Alignment:
Q  801 acatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||| ||||||||| |||||| | || ||||||||||||||||||    
T  31933704 acatcatttattaaatgaatctaaaaagtagaaatttgcttataatagtga 31933654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 794 - 847
Target Start/End: Complemental strand, 2582872 - 2582819
Alignment:
Q  794 actaaatacatcatttaataaatgaatttaaaaaattgatatttgcttataata 847  Q
    |||| |||||||||||||| ||| ||| ||||| |||||| |||||||||||||    
T  2582872 actacatacatcatttaatgaatcaatctaaaatattgatttttgcttataata 2582819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 794 - 851
Target Start/End: Original strand, 6975009 - 6975066
Alignment:
Q  794 actaaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||| |||||||||| ||| |||||||| ||||  ||||| |||||||||||||||||    
T  6975009 actacatacatcattaaatgaatgaattcaaaatgttgatttttgcttataatagtga 6975066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 794 - 851
Target Start/End: Complemental strand, 21142154 - 21142097
Alignment:
Q  794 actaaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||||||||||  |||||| |||||  ||||| |||| ||||||||||||    
T  21142154 actaaatacatcatttaatgcatgaatctaaaatgttgatttttgtttataatagtga 21142097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 794 - 851
Target Start/End: Original strand, 34616291 - 34616348
Alignment:
Q  794 actaaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||| |||||||||||||| |||| || |||||  ||||| |||||||||||||||||    
T  34616291 actatatacatcatttaatgaatgtatctaaaacgttgatttttgcttataatagtga 34616348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 794 - 851
Target Start/End: Original strand, 38382052 - 38382109
Alignment:
Q  794 actaaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||| |||||||||||||| |||| || |||||  ||||| |||||||||||||||||    
T  38382052 actacatacatcatttaatgaatgtatctaaaacgttgatttttgcttataatagtga 38382109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 794 - 849
Target Start/End: Original strand, 28038903 - 28038958
Alignment:
Q  794 actaaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagt 849  Q
    ||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||    
T  28038903 actaaatacatcatttaataaatgaatctaaaaagttgatttttgcttataatagt 28038958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 799 - 851
Target Start/End: Complemental strand, 34953955 - 34953903
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||||| ||||||||||||| |||||| |||||||||||||||||    
T  34953955 atacatcatttaatgaatgaatttaaaatattgatttttgcttataatagtga 34953903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 797 - 851
Target Start/End: Original strand, 15290657 - 15290711
Alignment:
Q  797 aaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||||| ||||||||| |||||| |||| | ||||||||||||||||    
T  15290657 aaatacatcatttattaaatgaatctaaaaagttgacacttgcttataatagtga 15290711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 794 - 851
Target Start/End: Original strand, 9676042 - 9676099
Alignment:
Q  794 actaaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||||||||  |||||||| ||| |||||||| ||| |||||||||||||    
T  9676042 actaaatacatcatttatcaaatgaatctaagaaattgatttttacttataatagtga 9676099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 786 - 851
Target Start/End: Original strand, 50308696 - 50308761
Alignment:
Q  786 taacatatactaaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    ||||||| || |||||||||||||||| |||||| ||||||  ||| | |||||||||||||||||    
T  50308696 taacatagaccaaatacatcatttaatgaatgaacttaaaatgttggtttttgcttataatagtga 50308761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 799 - 851
Target Start/End: Original strand, 2122650 - 2122702
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    ||||| |||||||| ||||||| |||||||| ||| |||||||||||||||||    
T  2122650 atacaacatttaatgaatgaatctaaaaaatggatttttgcttataatagtga 2122702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 799 - 851
Target Start/End: Original strand, 14967306 - 14967358
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||||| ||||||| |||||  ||||| |||||||||||||||||    
T  14967306 atacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtga 14967358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 799 - 851
Target Start/End: Original strand, 24981922 - 24981974
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||||| ||||||| |||||  ||||| |||||||||||||||||    
T  24981922 atacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtga 24981974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 799 - 851
Target Start/End: Complemental strand, 46906920 - 46906868
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||||| ||||||| ||||| || ||| |||||||||||||||||    
T  46906920 atacatcatttaatgaatgaatctaaaatatagatttttgcttataatagtga 46906868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 799 - 846
Target Start/End: Original strand, 33765868 - 33765915
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataat 846  Q
    |||||||||||||||||||||| |||||  ||||| ||||||||||||    
T  33765868 atacatcatttaataaatgaatctaaaatgttgatttttgcttataat 33765915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 797 - 851
Target Start/End: Complemental strand, 6156695 - 6156641
Alignment:
Q  797 aaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||||| | ||||||| |||||| ||||| |||| ||||||||||||    
T  6156695 aaatacatcatttattgaatgaatctaaaaagttgatttttgtttataatagtga 6156641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 797 - 851
Target Start/End: Complemental strand, 50308689 - 50308635
Alignment:
Q  797 aaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||| ||||||| ||| ||| |||||| ||||| |||||||||||||||||    
T  50308689 aaatacataatttaatgaataaatctaaaaagttgatttttgcttataatagtga 50308635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 790 - 851
Target Start/End: Original strand, 3906833 - 3906894
Alignment:
Q  790 atatactaaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||| ||||| |||||| ||||||||| ||||||||  || |||| ||||||||||||    
T  3906833 atatactacatacaccatttattaaatgaatctaaaaaataaatttttgtttataatagtga 3906894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 794 - 851
Target Start/End: Complemental strand, 38834675 - 38834618
Alignment:
Q  794 actaaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||| |||||||||||| | ||||||| ||||||||  || |||||||||||||||||    
T  38834675 actatatacatcatttatttaatgaatctaaaaaataaatttttgcttataatagtga 38834618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 799 - 852
Target Start/End: Complemental strand, 39420377 - 39420324
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtgag 852  Q
    |||||||||||||| ||| |||||||||  || || ||||||||||||||||||    
T  39420377 atacatcatttaatgaatcaatttaaaatgttaatttttgcttataatagtgag 39420324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 799 - 844
Target Start/End: Complemental strand, 41007736 - 41007691
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttata 844  Q
    |||||||||||||| ||| ||||||||| |||||| ||||||||||    
T  41007736 atacatcatttaatgaataaatttaaaatattgatttttgcttata 41007691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 794 - 851
Target Start/End: Original strand, 17871839 - 17871896
Alignment:
Q  794 actaaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    ||||||||||||||||||| ||||||  |||||||||||| |||||||||||||||||    
T  17871839 actaaatacatcatttaatgaatgaacctaaaaaattgatttttgcttataatagtga 17871896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 786 - 851
Target Start/End: Original strand, 17986262 - 17986327
Alignment:
Q  786 taacatatactaaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    ||||||| ||||||||||||||||||| ||||||  |||||| ||||| ||| |||||||||||||    
T  17986262 taacatagactaaatacatcatttaatgaatgaacctaaaaagttgatttttacttataatagtga 17986327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 794 - 851
Target Start/End: Complemental strand, 13841912 - 13841855
Alignment:
Q  794 actaaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    ||||||||||||||||| | |||||||||||||| |  || |||||||||||||||||    
T  13841912 actaaatacatcatttattgaatgaatttaaaaagtaaatttttgcttataatagtga 13841855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 799 - 851
Target Start/End: Original strand, 10934684 - 10934736
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||||| ||||||| |||||  ||||| |||||||||||||||||    
T  10934684 atacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtga 10934736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 799 - 851
Target Start/End: Complemental strand, 13964478 - 13964426
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||| | |||||||||||||  ||||| |||||||||||||||||    
T  13964478 atacatcatttattgaatgaatttaaaatgttgatttttgcttataatagtga 13964426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 799 - 851
Target Start/End: Complemental strand, 27502960 - 27502908
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||||| |||||||||||||  || || |||||||||||||||||    
T  27502960 atacatcatttaatgaatgaatttaaaatgttaatttttgcttataatagtga 27502908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 799 - 851
Target Start/End: Complemental strand, 41753817 - 41753765
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||||| |||||||||||||  ||||  |||||||||||||||||    
T  41753817 atacatcatttaatgaatgaatttaaaatgttgaattttgcttataatagtga 41753765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 797 - 847
Target Start/End: Complemental strand, 17871824 - 17871774
Alignment:
Q  797 aaatacatcatttaataaatgaatttaaaaaattgatatttgcttataata 847  Q
    |||||||||||||||| ||||||  |||||| ||||| |||||||||||||    
T  17871824 aaatacatcatttaatgaatgaacctaaaaagttgatttttgcttataata 17871774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 797 - 851
Target Start/End: Complemental strand, 26998730 - 26998676
Alignment:
Q  797 aaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||||||||||| ||  ||||||||| || |||| ||||||||||||    
T  26998730 aaatacatcatttaataaataaacctaaaaaattaatttttgtttataatagtga 26998676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 797 - 847
Target Start/End: Original strand, 26998748 - 26998798
Alignment:
Q  797 aaatacatcatttaataaatgaatttaaaaaattgatatttgcttataata 847  Q
    |||||||||||||||||||| |||||||||| || || ||| |||||||||    
T  26998748 aaatacatcatttaataaataaatttaaaaagttaatttttacttataata 26998798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 786 - 851
Target Start/End: Complemental strand, 37288629 - 37288563
Alignment:
Q  786 taacatatactaaatacatcatttaataaatgaatttaaaaaattga-tatttgcttataatagtga 851  Q
    ||||||| || |||||||||||||||| ||||||  ||||||||||| | ||| |||||||||||||    
T  37288629 taacatagacgaaatacatcatttaatgaatgaacctaaaaaattgattttttacttataatagtga 37288563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 794 - 851
Target Start/End: Complemental strand, 24471248 - 24471191
Alignment:
Q  794 actaaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||| ||||||||||| || |||| ||||||||  ||||| |||||||||||||||||    
T  24471248 actacatacatcattttatgaatgtatttaaaatgttgatttttgcttataatagtga 24471191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 794 - 851
Target Start/End: Original strand, 31271608 - 31271665
Alignment:
Q  794 actaaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    ||||||||||||| ||| | ||| ||||| |||| ||||| |||||||||||||||||    
T  31271608 actaaatacatcacttattgaataaatttgaaaagttgatttttgcttataatagtga 31271665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 794 - 851
Target Start/End: Original strand, 44319605 - 44319662
Alignment:
Q  794 actaaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||| |||||||||||||||||| | | ||||| ||| || |||||||||||||||||    
T  44319605 actacatacatcatttaataaattattctaaaatattaatttttgcttataatagtga 44319662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 799 - 851
Target Start/End: Complemental strand, 12104804 - 12104752
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    ||||||||||||||||||||||||||||  ||||| |||||||||||||||||    
T  12104804 atacatcatttaataaatgaatttaaaatgttgatttttgcttataatagtga 12104752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 797 - 851
Target Start/End: Original strand, 3203750 - 3203804
Alignment:
Q  797 aaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||||| ||||||||  |||||| ||||| |||||||||||||||||    
T  3203750 aaatacatcatttattaaatgaacctaaaaagttgatttttgcttataatagtga 3203804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 797 - 851
Target Start/End: Original strand, 16121044 - 16121098
Alignment:
Q  797 aaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||||| | ||||||| |||||| ||||| |||||||||||||||||    
T  16121044 aaatacatcatttatttaatgaatctaaaaagttgatttttgcttataatagtga 16121098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 790 - 851
Target Start/End: Complemental strand, 14218265 - 14218204
Alignment:
Q  790 atatactaaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||| || ||| ||||||||||||||| ||||| |||||| |||||||||||| ||||    
T  14218265 atatactatattcattatttaataaatgaatctaaaatattgatttttgcttataattgtga 14218204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 794 - 851
Target Start/End: Original strand, 31996575 - 31996632
Alignment:
Q  794 actaaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||| |||||||||||||||||||||  |||||  ||||| |||||||||||||||||    
T  31996575 actacatacatcatttaataaatgaacctaaaatgttgatttttgcttataatagtga 31996632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 797 - 849
Target Start/End: Complemental strand, 11174110 - 11174058
Alignment:
Q  797 aaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagt 849  Q
    |||||||| ||||||||||||||| |||||||||||| |||  ||||||||||    
T  11174110 aaatacataatttaataaatgaatctaaaaaattgatttttatttataatagt 11174058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 790 - 849
Target Start/End: Complemental strand, 11745992 - 11745932
Alignment:
Q  790 atatactaaatacatcatttaataaatgaatttaaaaaattgata-tttgcttataatagt 849  Q
    |||||| | |||||||||||||| ||||||| ||||| ||||||| |||||||||||||||    
T  11745992 atataccacatacatcatttaatgaatgaatctaaaatattgatattttgcttataatagt 11745932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 799 - 847
Target Start/End: Original strand, 15517171 - 15517219
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataata 847  Q
    |||||||||||||| ||||||| ||||| |||||| |||||||||||||    
T  15517171 atacatcatttaatgaatgaatctaaaatattgatttttgcttataata 15517219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 799 - 851
Target Start/End: Original strand, 34379816 - 34379868
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||||| ||||||| |||||  ||||| |||||||||||||||||    
T  34379816 atacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtga 34379868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 794 - 851
Target Start/End: Original strand, 6797444 - 6797501
Alignment:
Q  794 actaaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||| |||||||| ||||||  |||||||||||| | || ||||||||||||    
T  6797444 actaaatacaacatttaatgaatgaacctaaaaaattgatttgtgtttataatagtga 6797501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 799 - 851
Target Start/End: Complemental strand, 10872731 - 10872679
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||||| ||||||||||||| |||||| |||||||||||||||||    
T  10872731 atacatcatttaatgaatgaatttaaaatattgatttttgcttataatagtga 10872679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 799 - 851
Target Start/End: Complemental strand, 20625298 - 20625246
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    ||||||||||||||||||||||||||||  ||||| |||| ||||||||||||    
T  20625298 atacatcatttaataaatgaatttaaaatgttgatttttgtttataatagtga 20625246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 799 - 851
Target Start/End: Complemental strand, 24722746 - 24722694
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||||||||||||| ||||| ||| || |||||||||||||||||    
T  24722746 atacatcatttaataaatgaatctaaaatattaatttttgcttataatagtga 24722694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 785 - 851
Target Start/End: Original strand, 39579560 - 39579626
Alignment:
Q  785 ttaacatatactaaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||| ||| ||||||||||||| ||||  ||||||| |||||| ||||| |||||||||||||||||    
T  39579560 ttaatatagactaaatacatcacttaacgaatgaatctaaaaagttgatttttgcttataatagtga 39579626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 799 - 851
Target Start/End: Complemental strand, 22497010 - 22496958
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||||| ||||||| ||||| ||| || |||||||||||||||||    
T  22497010 atacatcatttaatgaatgaatctaaaatattaatttttgcttataatagtga 22496958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 799 - 851
Target Start/End: Complemental strand, 24694287 - 24694235
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||||||||||||| |||||  ||||| |||||||||| ||||||    
T  24694287 atacatcatttaataaatgaatctaaaatgttgatttttgcttatagtagtga 24694235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 799 - 851
Target Start/End: Original strand, 37897763 - 37897815
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||| ||||||| |||||||||||||  ||||| |||||||||||||||||    
T  37897763 atacataatttaatgaatgaatttaaaatgttgatttttgcttataatagtga 37897815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 799 - 851
Target Start/End: Original strand, 40639790 - 40639842
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||||| |||||||||||||  || || |||||||||||||||||    
T  40639790 atacatcatttaatgaatgaatttaaaatgttaatttttgcttataatagtga 40639842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 799 - 851
Target Start/End: Original strand, 40639876 - 40639928
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||||| ||| |||||||||  ||||| |||||||||||||||||    
T  40639876 atacatcatttaatgaataaatttaaaatgttgatttttgcttataatagtga 40639928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 799 - 851
Target Start/End: Original strand, 50603594 - 50603646
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||| | |||||| ||||||||| ||| |||||||||||||||||    
T  50603594 atacatcatttattgaatgaacttaaaaaatagatttttgcttataatagtga 50603646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 799 - 851
Target Start/End: Complemental strand, 51253729 - 51253677
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    ||||||||||||||||||| |||||||| |||||| |||| ||||||| ||||    
T  51253729 atacatcatttaataaatggatttaaaatattgatttttgtttataatggtga 51253677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 799 - 851
Target Start/End: Complemental strand, 54595849 - 54595797
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||||| ||||||| |||||  ||||| |||||||||||||||||    
T  54595849 atacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtga 54595797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 797 - 847
Target Start/End: Complemental strand, 29241541 - 29241491
Alignment:
Q  797 aaatacatcatttaataaatgaatttaaaaaattgatatttgcttataata 847  Q
    |||| ||||||||| ||||||||  |||||||||||| |||||||||||||    
T  29241541 aaatgcatcatttattaaatgaacctaaaaaattgatttttgcttataata 29241491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 794 - 851
Target Start/End: Complemental strand, 7882345 - 7882288
Alignment:
Q  794 actaaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||| |||||||||||||| ||||||| |||||  || || |||||||||||||||||    
T  7882345 actatatacatcatttaattaatgaatctaaaatgttaatttttgcttataatagtga 7882288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 794 - 851
Target Start/End: Complemental strand, 8036600 - 8036543
Alignment:
Q  794 actaaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    ||||||||||||| ||| | ||||||  ||||||||  ||||||||||||||||||||    
T  8036600 actaaatacatcagttattcaatgaacctaaaaaataaatatttgcttataatagtga 8036543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.000000000002; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 797 - 851
Target Start/End: Original strand, 34478314 - 34478368
Alignment:
Q  797 aaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||||| ||||||||| ||||||||| || |||||||||||||||||    
T  34478314 aaatacatcatttagtaaatgaatctaaaaaattaatttttgcttataatagtga 34478368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 799 - 851
Target Start/End: Complemental strand, 43103131 - 43103079
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    ||||||||||||||||||||||||||||  || || |||||||||||||||||    
T  43103131 atacatcatttaataaatgaatttaaaatgttaatttttgcttataatagtga 43103079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 799 - 851
Target Start/End: Complemental strand, 2943271 - 2943219
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||||| ||||||| |||||  ||||| |||||||||||||||||    
T  2943271 atacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtga 2943219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 799 - 851
Target Start/End: Complemental strand, 23818483 - 23818431
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||||| ||||||| |||||  ||||| |||||||||||||||||    
T  23818483 atacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtga 23818431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 799 - 851
Target Start/End: Original strand, 25245224 - 25245276
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||||| ||||||| |||||  ||||| |||||||||||||||||    
T  25245224 atacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtga 25245276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 797 - 849
Target Start/End: Original strand, 28752158 - 28752210
Alignment:
Q  797 aaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagt 849  Q
    ||||| |||||||||| ||||||| ||||||||| || |||||||||||||||    
T  28752158 aaatatatcatttaatgaatgaatgtaaaaaattaatttttgcttataatagt 28752210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 799 - 849
Target Start/End: Complemental strand, 4089188 - 4089138
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagt 849  Q
    |||||||||||||| ||||||| ||||| |||||| |||| ||||||||||    
T  4089188 atacatcatttaatgaatgaatataaaatattgatttttgtttataatagt 4089138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 801 - 847
Target Start/End: Complemental strand, 12088868 - 12088822
Alignment:
Q  801 acatcatttaataaatgaatttaaaaaattgatatttgcttataata 847  Q
    |||||||||||||||| ||| ||||| |||||| |||||||||||||    
T  12088868 acatcatttaataaattaatctaaaatattgatttttgcttataata 12088822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 803 - 845
Target Start/End: Original strand, 31814718 - 31814760
Alignment:
Q  803 atcatttaataaatgaatttaaaaaattgatatttgcttataa 845  Q
    |||||||||||||||||||||||| ||| || |||||||||||    
T  31814718 atcatttaataaatgaatttaaaatatttatttttgcttataa 31814760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 799 - 848
Target Start/End: Complemental strand, 21586873 - 21586824
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatag 848  Q
    |||||||||| ||||||||||| ||||| |||||| |||| |||||||||    
T  21586873 atacatcattgaataaatgaatctaaaatattgatttttgtttataatag 21586824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.00000000003; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 799 - 851
Target Start/End: Complemental strand, 3121481 - 3121429
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||| ||||||||||||||| ||||| |||||| |||||||||||||||||    
T  3121481 atacattatttaataaatgaatctaaaatattgatttttgcttataatagtga 3121429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 786 - 845
Target Start/End: Original strand, 5559497 - 5559556
Alignment:
Q  786 taacatatactaaatacatcatttaataaatgaatttaaaaaattgatatttgcttataa 845  Q
    ||||||| ||||||||||| ||||||| ||||||| |||||| ||||| |||||||||||    
T  5559497 taacatagactaaatacataatttaatgaatgaatataaaaagttgatttttgcttataa 5559556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 797 - 851
Target Start/End: Complemental strand, 5559490 - 5559436
Alignment:
Q  797 aaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    ||||||| |||||||||||||||| |||||||||||| ||| ||||||| |||||    
T  5559490 aaatacaacatttaataaatgaatctaaaaaattgatttttacttataacagtga 5559436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 797 - 851
Target Start/End: Complemental strand, 7650251 - 7650197
Alignment:
Q  797 aaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||||||| |||||| ||||||| ||||| |||||||| ||||||||    
T  7650251 aaatacatcatttaatgaatgaacttaaaaagttgatttttgcttacaatagtga 7650197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 794 - 851
Target Start/End: Complemental strand, 19268124 - 19268067
Alignment:
Q  794 actaaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    ||||||||||||||||| | |||||| ||||||| ||||| ||||||||||| |||||    
T  19268124 actaaatacatcatttattgaatgaacttaaaaagttgatttttgcttataacagtga 19268067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 790 - 851
Target Start/End: Complemental strand, 26003503 - 26003442
Alignment:
Q  790 atatactaaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||| |||||||||||||| ||||||  ||||| |||||| |||||||||||| ||||    
T  26003503 atatactacatacatcatttaatgaatgaacctaaaatattgatttttgcttataattgtga 26003442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 794 - 851
Target Start/End: Complemental strand, 41056952 - 41056895
Alignment:
Q  794 actaaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||| |||||||||||||| |||| || ||||| |||||| |||||||||||||||||    
T  41056952 actacatacatcatttaatgaatgtatctaaaacattgatttttgcttataatagtga 41056895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 799 - 851
Target Start/End: Original strand, 1961390 - 1961442
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||||| ||||||| |||||  ||||| |||||||||||||||||    
T  1961390 atacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtga 1961442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 799 - 851
Target Start/End: Original strand, 4563945 - 4563997
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    ||||||||||||||| |||||| ||||| |||||| ||| |||||||||||||    
T  4563945 atacatcatttaatagatgaatctaaaatattgatttttacttataatagtga 4563997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 799 - 847
Target Start/End: Original strand, 23378023 - 23378071
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataata 847  Q
    |||||||||||||||||||||| ||||| ||| || |||||||||||||    
T  23378023 atacatcatttaataaatgaatctaaaatattaatttttgcttataata 23378071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 799 - 851
Target Start/End: Complemental strand, 31024230 - 31024178
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||||| ||||||| |||||  ||||| |||||||||||||||||    
T  31024230 atacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtga 31024178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 799 - 847
Target Start/End: Complemental strand, 38181819 - 38181771
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataata 847  Q
    |||||||||||||| ||||||| ||||| |||||| |||||||||||||    
T  38181819 atacatcatttaatgaatgaatctaaaatattgatttttgcttataata 38181771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 797 - 851
Target Start/End: Complemental strand, 23143547 - 23143493
Alignment:
Q  797 aaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||||| ||| ||||  |||||| ||||| |||||||||||||||||    
T  23143547 aaatacatcatttattaagtgaacctaaaaagttgatttttgcttataatagtga 23143493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 797 - 851
Target Start/End: Complemental strand, 23555337 - 23555283
Alignment:
Q  797 aaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||||| ||| ||||  |||||| ||||| |||||||||||||||||    
T  23555337 aaatacatcatttattaagtgaacctaaaaagttgatttttgcttataatagtga 23555283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 794 - 847
Target Start/End: Complemental strand, 3098190 - 3098137
Alignment:
Q  794 actaaatacatcatttaataaatgaatttaaaaaattgatatttgcttataata 847  Q
    |||| ||||||||||||||||||| || |||||  ||||| |||||||||||||    
T  3098190 actacatacatcatttaataaatgtatctaaaacgttgatttttgcttataata 3098137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 794 - 851
Target Start/End: Complemental strand, 13333511 - 13333454
Alignment:
Q  794 actaaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||| |||||||||||||| |||| || |||||  ||||| |||||||||||||||||    
T  13333511 actacatacatcatttaatgaatgtatctaaaacgttgatttttgcttataatagtga 13333454  T

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Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 794 - 851
Target Start/End: Original strand, 15446854 - 15446911
Alignment:
Q  794 actaaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||| |||||||||||||||||||||  ||||||||  || ||| |||||||||||||    
T  15446854 actatatacatcatttaataaatgaacctaaaaaatgaatttttacttataatagtga 15446911  T

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Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 794 - 847
Target Start/End: Complemental strand, 15916797 - 15916744
Alignment:
Q  794 actaaatacatcatttaataaatgaatttaaaaaattgatatttgcttataata 847  Q
    |||| |||||| ||||||| ||||||| ||||| |||||| |||||||||||||    
T  15916797 actacatacattatttaatgaatgaatctaaaatattgatttttgcttataata 15916744  T

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Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 794 - 851
Target Start/End: Complemental strand, 25270920 - 25270863
Alignment:
Q  794 actaaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||| |||||||||||||| |||| || |||||  ||||| |||||||||||||||||    
T  25270920 actacatacatcatttaatgaatgtatctaaaacgttgatttttgcttataatagtga 25270863  T

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Target: chr5 (Bit Score: 35; Significance: 0.0000000004; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 797 - 847
Target Start/End: Original strand, 23262513 - 23262563
Alignment:
Q  797 aaatacatcatttaataaatgaatttaaaaaattgatatttgcttataata 847  Q
    |||||||||||||| | |||||||||||||||||||  |||||||||||||    
T  23262513 aaatacatcatttatttaatgaatttaaaaaattgaattttgcttataata 23262563  T

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Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 794 - 851
Target Start/End: Complemental strand, 7613422 - 7613365
Alignment:
Q  794 actaaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||  |||||||| |||||| ||||||| ||||| |||||||||||||||||    
T  7613422 actaaatactgcatttaatgaatgaacttaaaaagttgatttttgcttataatagtga 7613365  T

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Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 794 - 851
Target Start/End: Original strand, 10437713 - 10437770
Alignment:
Q  794 actaaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||| |||||| ||||||||||||||| |||||  ||||| |||||||||||||||||    
T  10437713 actacatacataatttaataaatgaatctaaaatgttgatttttgcttataatagtga 10437770  T

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Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 794 - 851
Target Start/End: Original strand, 13654584 - 13654641
Alignment:
Q  794 actaaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    ||||||||||||||||| | |||||||||||||| |  || |||||||||||||||||    
T  13654584 actaaatacatcatttattgaatgaatttaaaaagtgaatttttgcttataatagtga 13654641  T

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Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 799 - 851
Target Start/End: Complemental strand, 4967773 - 4967721
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    ||||||||||||||||||||||||||||  ||||| |||| ||| ||||||||    
T  4967773 atacatcatttaataaatgaatttaaaatgttgatttttgtttaaaatagtga 4967721  T

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Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 797 - 851
Target Start/End: Original strand, 4297276 - 4297330
Alignment:
Q  797 aaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||||||| ||||||| |||||  ||||| |||| ||||||||||||    
T  4297276 aaatacatcatttaattaatgaatataaaatgttgatttttgtttataatagtga 4297330  T

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Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 799 - 849
Target Start/End: Original strand, 15311939 - 15311989
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagt 849  Q
    |||||||||||| ||||||||| |||||||| ||| ||| |||||||||||    
T  15311939 atacatcatttattaaatgaatctaaaaaatagatttttccttataatagt 15311989  T

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Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 797 - 851
Target Start/End: Original strand, 25694194 - 25694248
Alignment:
Q  797 aaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||||||| ||||||  || ||| ||||| |||||||||||||||||    
T  25694194 aaatacatcatttaatgaatgaacctagaaagttgatttttgcttataatagtga 25694248  T

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Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 794 - 847
Target Start/End: Complemental strand, 32911534 - 32911480
Alignment:
Q  794 actaaatacatcatttaataaatgaatttaaaaaattga-tatttgcttataata 847  Q
    ||||||||||||||||||||||||||  |||||| |||| | |||||||||||||    
T  32911534 actaaatacatcatttaataaatgaacctaaaaagttgattttttgcttataata 32911480  T

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Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 794 - 851
Target Start/End: Original strand, 32911568 - 32911626
Alignment:
Q  794 actaaatacatcatttaataaatgaatttaaaaaattga-tatttgcttataatagtga 851  Q
    ||||||||||||||||||| ||||||  |||||| |||| | |||||||||||||||||    
T  32911568 actaaatacatcatttaatgaatgaacctaaaaagttgattttttgcttataatagtga 32911626  T

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Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 801 - 851
Target Start/End: Complemental strand, 40100144 - 40100094
Alignment:
Q  801 acatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||| |||||||||||||||| |  || |||||||||||||||||    
T  40100144 acatcatttattaaatgaatttaaaaagtcaatttttgcttataatagtga 40100094  T

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Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 794 - 851
Target Start/End: Complemental strand, 14107593 - 14107536
Alignment:
Q  794 actaaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||| |||||||| | ||||||||| |||||| ||  |||||||||||||||||    
T  14107593 actaaataaatcatttattcaatgaatttgaaaaatagaattttgcttataatagtga 14107536  T

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Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 794 - 851
Target Start/End: Original strand, 17625716 - 17625773
Alignment:
Q  794 actaaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||| |||||||||||||| |||| || |||||  ||||| |||||||||||||||||    
T  17625716 actacatacatcatttaatgaatgtatctaaaacgttgatttttgcttataatagtga 17625773  T

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Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 794 - 851
Target Start/End: Original strand, 22227057 - 22227114
Alignment:
Q  794 actaaatacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||| |||||||||| ||||||  |||||  ||||| |||||||||||||||||    
T  22227057 actaaatatatcatttaatgaatgaacctaaaacgttgatttttgcttataatagtga 22227114  T

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Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 794 - 847
Target Start/End: Complemental strand, 41005732 - 41005679
Alignment:
Q  794 actaaatacatcatttaataaatgaatttaaaaaattgatatttgcttataata 847  Q
    |||| |||||||||||||||||||||| |||||  ||||| ||| |||||||||    
T  41005732 actacatacatcatttaataaatgaatctaaaatgttgatttttacttataata 41005679  T

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Target: scaffold0149 (Bit Score: 33; Significance: 0.000000007; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 799 - 851
Target Start/End: Original strand, 24687 - 24739
Alignment:
Q  799 atacatcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    |||||||||||||| ||||||| ||||| ||| || |||||||||||||||||    
T  24687 atacatcatttaatgaatgaatctaaaatattaatttttgcttataatagtga 24739  T

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Target: scaffold0020 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 802 - 851
Target Start/End: Complemental strand, 139352 - 139303
Alignment:
Q  802 catcatttaataaatgaatttaaaaaattgatatttgcttataatagtga 851  Q
    ||||||| ||| ||||||| |||||||| ||| |||||||||||||||||    
T  139352 catcattaaatgaatgaatgtaaaaaatagatttttgcttataatagtga 139303  T

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