View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6019_low_48 (Length: 261)

Name: NF6019_low_48
Description: NF6019
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6019_low_48
NF6019_low_48
[»] chr7 (7 HSPs)
chr7 (67-247)||(48477168-48477350)
chr7 (69-247)||(42786633-42786813)
chr7 (69-243)||(4340314-4340491)
chr7 (64-149)||(3079261-3079346)
chr7 (72-149)||(21959444-21959521)
chr7 (72-146)||(19802018-19802092)
chr7 (64-149)||(3080622-3080707)
[»] chr4 (10 HSPs)
chr4 (69-233)||(4851811-4851977)
chr4 (69-247)||(2895275-2895455)
chr4 (66-244)||(5908265-5908445)
chr4 (72-221)||(5599025-5599176)
chr4 (77-244)||(6735879-6736049)
chr4 (72-149)||(13701736-13701813)
chr4 (72-149)||(13712229-13712306)
chr4 (72-149)||(5579341-5579418)
chr4 (89-149)||(1505136-1505196)
chr4 (72-149)||(31666507-31666586)
[»] chr2 (3 HSPs)
chr2 (76-244)||(2696584-2696754)
chr2 (72-244)||(31347521-31347698)
chr2 (72-146)||(31314417-31314491)
[»] chr1 (8 HSPs)
chr1 (63-233)||(14115691-14115863)
chr1 (68-149)||(15088030-15088111)
chr1 (68-149)||(22210638-22210719)
chr1 (68-149)||(22219388-22219469)
chr1 (69-149)||(22207076-22207156)
chr1 (71-149)||(7898768-7898847)
chr1 (72-149)||(51843718-51843795)
chr1 (72-147)||(44193666-44193741)
[»] chr6 (9 HSPs)
chr6 (72-221)||(33301286-33301437)
chr6 (77-244)||(31113764-31113933)
chr6 (72-149)||(5131558-5131636)
chr6 (72-217)||(6405888-6406036)
chr6 (72-144)||(34256433-34256505)
chr6 (72-149)||(8519050-8519127)
chr6 (72-149)||(28144160-28144237)
chr6 (69-124)||(8706823-8706878)
chr6 (190-243)||(8519171-8519224)
[»] scaffold0046 (1 HSPs)
scaffold0046 (72-244)||(89614-89788)
[»] chr3 (10 HSPs)
chr3 (68-149)||(19440498-19440579)
chr3 (72-148)||(2747311-2747387)
chr3 (72-146)||(14521885-14521959)
chr3 (72-149)||(28034112-28034189)
chr3 (69-149)||(5835055-5835135)
chr3 (72-148)||(37489146-37489222)
chr3 (72-142)||(18110863-18110933)
chr3 (84-149)||(11418187-11418252)
chr3 (72-144)||(19360112-19360184)
chr3 (188-244)||(5938284-5938340)
[»] chr8 (3 HSPs)
chr8 (72-149)||(20811254-20811331)
chr8 (72-144)||(5556895-5556967)
chr8 (72-149)||(4844657-4844732)
[»] scaffold0158 (2 HSPs)
scaffold0158 (72-146)||(230-304)
scaffold0158 (72-146)||(37687-37761)
[»] scaffold0043 (1 HSPs)
scaffold0043 (67-149)||(70367-70449)
[»] scaffold0060 (1 HSPs)
scaffold0060 (77-149)||(45423-45495)
[»] chr5 (2 HSPs)
chr5 (72-144)||(41527650-41527722)
chr5 (203-247)||(37456309-37456353)
[»] scaffold0018 (1 HSPs)
scaffold0018 (69-149)||(66229-66310)


Alignment Details
Target: chr7 (Bit Score: 132; Significance: 1e-68; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 67 - 247
Target Start/End: Original strand, 48477168 - 48477350
Alignment:
Q  67 tttgaaacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataaataaata--ctctgaac 164  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||  ||||||||    
T  48477168 tttgaaacacccctactagaaatcacctaggatatctagcatgtgtgttaaacttggcgtcggatacattaaaattacaataaatagatattctctgaac 48477267  T
Q  165 aaatcatagaatttctcgcctgttacctcagaaatagttccactgacgtgtactttatatggtccagctacttctgcttcatc 247  Q
    |||||||||||||||| |||||||||||| |||||||||||||||| ||||||| ||||||||| |||||||||| |||||||    
T  48477268 aaatcatagaatttcttgcctgttacctccgaaatagttccactgaagtgtactctatatggtcaagctacttcttcttcatc 48477350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 69 - 247
Target Start/End: Complemental strand, 42786813 - 42786633
Alignment:
Q  69 tgaaacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataaataaata--ctctgaacaa 166  Q
    |||||||||||| |||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||  ||||||||||    
T  42786813 tgaaacacccctactagaaatcacctaggatatctagcatttgtgttaaacttggcgtcggatacattaaaattacaataaatagatattctctgaacaa 42786714  T
Q  167 atcatagaatttctcgcctgttacctcagaaatagttccactgacgtgtactttatatggtccagctacttctgcttcatc 247  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||| |||||||    
T  42786713 atcatagaatttcttgcctgttacctccgaaatagttccactgacgtgtactctatatggtcaagctacttcttcttcatc 42786633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 4340314 - 4340491
Alignment:
Q  69 tgaaacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataaataaa---tactctgaaca 165  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||  |||| |||||||||||||||||  |||   |  |||||| |    
T  4340314 tgaaacacccctactagacattacctaggatatctagcatgtgtgttaaacttggcggtggatgcattaaaattacaataataaaaatttcttctgaata 4340413  T
Q  166 aatcatagaatttctcgcctgttacctcagaaatagttccactgacgtgtactttatatggtccagctacttctgctt 243  Q
    |   || ||| | |||| ||  |||||| |||||| | ||||||||||| |||||||||| |||||||||||||||||    
T  4340414 agatatggaaatgctcgtcttatacctctgaaataataccactgacgtgaactttatatgatccagctacttctgctt 4340491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 64 - 149
Target Start/End: Complemental strand, 3079346 - 3079261
Alignment:
Q  64 ggttttgaaacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 149  Q
    ||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||| | ||||||||||||||| ||||||    
T  3079346 ggttttgaaacacccctactagacattacctatgatatctagcatgtgtgttaaacttgacattggatacattaaaatttcaataa 3079261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 72 - 149
Target Start/End: Complemental strand, 21959521 - 21959444
Alignment:
Q  72 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 149  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||    
T  21959521 aacacccctactagaaatttcctaggatatctagcatgtgtgttaaacttggcattggatacattaaaattacaataa 21959444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 146
Target Start/End: Original strand, 19802018 - 19802092
Alignment:
Q  72 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaa 146  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||   |||||||||||||||||||    
T  19802018 aacacccctactagaaattacctaggatatctagcatgagtgttaaacttgacaatggatacattaaaattacaa 19802092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 64 - 149
Target Start/End: Original strand, 3080622 - 3080707
Alignment:
Q  64 ggttttgaaacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 149  Q
    ||||||||||||||||| ||||| |||||||| |||||||||||||||||| ||||||| | | ||||||||||||||| ||||||    
T  3080622 ggttttgaaacacccctactagacattacctatgatatctagcatgtgtgtgaaacttggcattggatacattaaaatttcaataa 3080707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 128; Significance: 3e-66; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 69 - 233
Target Start/End: Original strand, 4851811 - 4851977
Alignment:
Q  69 tgaaacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataaataaata--ctctgaacaa 166  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||    
T  4851811 tgaaacacccctactagaaatcacctaggatatctagcatgtgtgttaaacttggcgtcggatacattaaaattacaataaataaatattctctgaacaa 4851910  T
Q  167 atcatagaatttctcgcctgttacctcagaaatagttccactgacgtgtactttatatggtccagct 233  Q
    ||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  4851911 atcattgaatttctcgcgtgttacctcagaaatagttccactaacgtgtactttatatggtcaagct 4851977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 69 - 247
Target Start/End: Complemental strand, 2895455 - 2895275
Alignment:
Q  69 tgaaacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataaataaata--ctctgaacaa 166  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||  ||||||||||    
T  2895455 tgaaacacccctactagaaatcacctaggatatctagcatgtgtgttaaacttggcgtcggatacattaaaattacaataaatagatattctctgaacaa 2895356  T
Q  167 atcatagaatttctcgcctgttacctcagaaatagttccactgacgtgtactttatatggtccagctacttctgcttcatc 247  Q
    |||||||||||||| |||| |||||||  ||||||||||||||||||||||| ||||||||| |||||||||| |||||||    
T  2895355 atcatagaatttcttgcctattacctccaaaatagttccactgacgtgtactctatatggtcaagctacttcttcttcatc 2895275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 66 - 244
Target Start/End: Original strand, 5908265 - 5908445
Alignment:
Q  66 ttttgaaacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataaataaata--ctctgaa 163  Q
    ||||||||||||| | |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||  |||||||    
T  5908265 ttttgaaacacccttactagaaatcacctaggatatctagcatgtgtgttaaacttggcgtcggatacattaaaattataataaatagatattctctgaa 5908364  T
Q  164 caaatcatagaatttctcgcctgttacctcagaaatagttccactgacgtgtactttatatggtccagctacttctgcttc 244  Q
    ||||||||||||||||| || ||||||||| |||||||||||||||||||||||| ||||||||| |||||||||| ||||    
T  5908365 caaatcatagaatttcttgcatgttacctccgaaatagttccactgacgtgtactctatatggtcaagctacttcttcttc 5908445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 72 - 221
Target Start/End: Original strand, 5599025 - 5599176
Alignment:
Q  72 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataaataaata--ctctgaacaaatc 169  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||| |||||  |||||||||||||    
T  5599025 aacacccctactagaaatcacctaggatatctagcatgtgtgttaaacttggcgtcggatacattgaagttacaataaagaaatattctctgaacaaatc 5599124  T
Q  170 atagaatttctcgcctgttacctcagaaatagttccactgacgtgtacttta 221  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  5599125 atagaatttctcgcctattacctcagaaatagttccactaacgtgtacttta 5599176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 77 - 244
Target Start/End: Complemental strand, 6736049 - 6735879
Alignment:
Q  77 ccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataaataaa---tactctgaacaaatcatag 173  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||| | | ||||||||||||||||||||||  |||   | || |||  ||  |||||    
T  6736049 ccctactagaaattacctaggatatctagcatgtgtgttaaatttggcattggatacattaaaattacaataataaaaatttcctatgattaagacatag 6735950  T
Q  174 aatttctcgcctgttacctcagaaatagttccactgacgtgtactttatatggtccagctacttctgcttc 244  Q
    || |||||| ||  |||||| |||||| | ||| |||| || ||||||||||||||| | |||||||||||    
T  6735949 aaattctcgtcttatacctctgaaataataccagtgacttgaactttatatggtccaacaacttctgcttc 6735879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 13701736 - 13701813
Alignment:
Q  72 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 149  Q
    ||||||||  ||||||||| ||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||    
T  13701736 aacaccccgactagaaatttcctaggatatctagcatgtgtgttaaacttggcattggatacattaaaattacaataa 13701813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 13712229 - 13712306
Alignment:
Q  72 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 149  Q
    ||||||||  ||||||||| ||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||    
T  13712229 aacaccccgactagaaatttcctaggatatctagcatgtgtgttaaacttggcattggatacattaaaattacaataa 13712306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 149
Target Start/End: Complemental strand, 5579418 - 5579341
Alignment:
Q  72 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 149  Q
    ||||||||| ||||||||| |||||||||||||||||||||| |||| ||| | | | ||| ||||||||||||||||    
T  5579418 aacacccctactagaaatttcctaggatatctagcatgtgtgctaaatttggcattgaatatattaaaattacaataa 5579341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 1505136 - 1505196
Alignment:
Q  89 ttacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 149  Q
    |||||||||||||||||||||||||||||| ||| | | ||||||| ||||||||||||||    
T  1505136 ttacctaggatatctagcatgtgtgttaaatttggcattggatacactaaaattacaataa 1505196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 149
Target Start/End: Complemental strand, 31666586 - 31666507
Alignment:
Q  72 aacacccctgctagaaattacctaggat--atctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 149  Q
    ||||||||| ||||||||||||||||||  ||||||||| | ||||||||||| | | |||||||||||||||| |||||    
T  31666586 aacacccctactagaaattacctaggatttatctagcatttatgttaaacttggcattggatacattaaaattagaataa 31666507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 120; Significance: 2e-61; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 76 - 244
Target Start/End: Complemental strand, 2696754 - 2696584
Alignment:
Q  76 cccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataaataaata--ctctgaacaaatcatag 173  Q
    ||||| |||||||| ||||||||||||||| |||||||||||||||| ||||||||||||| || ||||||||||||||||  |||||||||||||||||    
T  2696754 cccctactagaaatcacctaggatatctaggatgtgtgttaaacttggcgtcggatacattgaagttacaataaataaatattctctgaacaaatcatag 2696655  T
Q  174 aatttctcgcctgttacctcagaaatagttccactgacgtgtactttatatggtccagctacttctgcttc 244  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||    
T  2696654 aatttctcgcctattacctcagaaatagttccactgacgtgtactttacatagtccagctacatctgcttc 2696584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 72 - 244
Target Start/End: Complemental strand, 31347698 - 31347521
Alignment:
Q  72 aacacccctgctagaaattacctaggat--atctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataaataaa---tactctgaacaa 166  Q
    ||||||||| ||||||||||||||||||  ||||||||| ||||||||| ||| | | |||||||||||||||| |||||  |||   | ||||||| ||    
T  31347698 aacacccctactagaaattacctaggatttatctagcatttgtgttaaagttggcattggatacattaaaattagaataatcaaaacttcctctgaataa 31347599  T
Q  167 atcatagaatttctcgcctgttacctcagaaatagttccactgacgtgtactttatatggtccagctacttctgcttc 244  Q
       || ||| |||||| ||  || ||| |||||| | ||||||||||| ||||||||||||||||| |||||||||||    
T  31347598 gatatggaagttctcgtcttataactctgaaataataccactgacgtgaactttatatggtccagcgacttctgcttc 31347521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 72 - 146
Target Start/End: Original strand, 31314417 - 31314491
Alignment:
Q  72 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaa 146  Q
    ||||||||| ||||||||| |||||||||||||||||| |||||||||||| |   |||||||||||||||||||    
T  31314417 aacacccctactagaaatttcctaggatatctagcatgagtgttaaacttggcaatggatacattaaaattacaa 31314491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 7e-58; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 63 - 233
Target Start/End: Complemental strand, 14115863 - 14115691
Alignment:
Q  63 gggttttgaaacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataaataaata--ctct 160  Q
    ||||| |||||||||| | |||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||  || |    
T  14115863 gggttgtgaaacacccatactagaaatcacctaggatatctagcatgtgtgttaaacttggcatcggatacattaaaattacaataaataaatattcttt 14115764  T
Q  161 gaacaaatcatagaatttctcgcctgttacctcagaaatagttccactgacgtgtactttatatggtccagct 233  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||| ||||||||||| ||||    
T  14115763 gaacaaatcatagaatttctcgcatgttacctaagaaatagttccactaacgtgtattttatatggtcaagct 14115691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 15088030 - 15088111
Alignment:
Q  68 ttgaaacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 149  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| | | ||||||||||||||| ||||||    
T  15088030 ttgaaacacccctactagacattacctaggatatctagcatgtgtgttaaacttggcattggatacattaaaatttcaataa 15088111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 22210638 - 22210719
Alignment:
Q  68 ttgaaacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 149  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| | | ||||||||||||||| ||||||    
T  22210638 ttgaaacacccctactagacattacctaggatatctagcatgtgtgttaaacttggcattggatacattaaaatttcaataa 22210719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 22219388 - 22219469
Alignment:
Q  68 ttgaaacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 149  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| | | ||||||||||||||| ||||||    
T  22219388 ttgaaacacccctactagacattacctaggatatctagcatgtgtgttaaacttggcattggatacattaaaatttcaataa 22219469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 22207076 - 22207156
Alignment:
Q  69 tgaaacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 149  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||| | | ||||||||||||||| ||||||    
T  22207076 tgaaacacccctactagacattacctaggatatctagcatgtgtgttaaacttggcattggatacattaaaatttcaataa 22207156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 71 - 149
Target Start/End: Original strand, 7898768 - 7898847
Alignment:
Q  71 aaacacccctgctagaaatt-acctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 149  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||| ||| | | ||||||||||||||||||||||    
T  7898768 aaacacccctactagaaatttacctaggatatctagcatgtgtgttaaatttggcattggatacattaaaattacaataa 7898847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 51843718 - 51843795
Alignment:
Q  72 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 149  Q
    ||||||| | ||||| ||||||||||||||||||| |||||||||||||||   | ||||||||||||||||||||||    
T  51843718 aacacccttactagacattacctaggatatctagcgtgtgtgttaaacttggtattggatacattaaaattacaataa 51843795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 147
Target Start/End: Complemental strand, 44193741 - 44193666
Alignment:
Q  72 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaat 147  Q
    ||||||||| ||||| ||| |||| ||||||||| | |||||||||||||| | | |||||| |||||||||||||    
T  44193741 aacacccctactagacatttcctaagatatctagtacgtgtgttaaacttggcattggatactttaaaattacaat 44193666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 109; Significance: 6e-55; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 72 - 221
Target Start/End: Complemental strand, 33301437 - 33301286
Alignment:
Q  72 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataaataaata--ctctgaacaaatc 169  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||| ||| ||||||||| || ||||||||||||||||  || ||||||||||    
T  33301437 aacacccctactagaaatcacctaggatatctagcatgtgtgttaaacttggcgttggatacattgaagttacaataaataaatattctatgaacaaatc 33301338  T
Q  170 atagaatttctcgcctgttacctcagaaatagttccactgacgtgtacttta 221  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33301337 atagaatttctcgcctattacctcagaaatagttccactgacgtgtacttta 33301286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 77 - 244
Target Start/End: Complemental strand, 31113933 - 31113764
Alignment:
Q  77 ccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaatt---acaataaataaatactctgaacaaatcatag 173  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||   |||||||| |||| ||||||| ||| |||||    
T  31113933 ccctactagaaattacctaggatatctagcatgtgtgttaaacttggcattggatacattaaaattacaacaataaaaaaattctctgaataaaacatag 31113834  T
Q  174 aatttctcgcctgttacctcagaaatagttccactgacgtgtactttatatggtccagctacttctgcttc 244  Q
    ||  |||||  |  ||||||  ||||| |  || ||||||| ||||||||||||||| | |||||||||||    
T  31113833 aa-atctcgtattatacctctaaaataatatcaatgacgtgaactttatatggtccaacaacttctgcttc 31113764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 72 - 149
Target Start/End: Complemental strand, 5131636 - 5131558
Alignment:
Q  72 aacacccctgctagaaatt-acctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 149  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||| ||| | | ||||||||||||||||||||||    
T  5131636 aacacccctactagaaatttacctaggatatctagcatgtgtgttaaatttggcattggatacattaaaattacaataa 5131558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 72 - 217
Target Start/End: Original strand, 6405888 - 6406036
Alignment:
Q  72 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataaataaa---tactctgaacaaat 168  Q
    ||||||| | ||||||||||| |||||||||||||||||| |||||||||| |    ||||||||||||||||||||| ||||   | ||||||||||||    
T  6405888 aacacccatactagaaattacataggatatctagcatgtgcgttaaacttggcacttgatacattaaaattacaataattaaaaatttctctgaacaaat 6405987  T
Q  169 catagaatttctcgcctgttacctcagaaatagttccactgacgtgtac 217  Q
     |||||||| ||||  || |||||| | |||||| |||||  |||||||    
T  6405988 tatagaattactcgtttgatacctctggaatagtaccactagcgtgtac 6406036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 72 - 144
Target Start/End: Complemental strand, 34256505 - 34256433
Alignment:
Q  72 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattac 144  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||| |   |||||||||||||||||    
T  34256505 aacacccctactagaaattacctaggatatctagcatgagtgttaaacttggcaatggatacattaaaattac 34256433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 8519050 - 8519127
Alignment:
Q  72 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 149  Q
    ||||||||| ||||| |||||||||||||||||||||| |||||||||||| |   |||||||||||||| |||||||    
T  8519050 aacacccctactagacattacctaggatatctagcatgcgtgttaaacttggcagtggatacattaaaatcacaataa 8519127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 28144160 - 28144237
Alignment:
Q  72 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 149  Q
    ||||||||| ||||||||| |||| |||||||||||||| ||||||| ||| | | ||||||||||||||||||||||    
T  28144160 aacacccctactagaaatttcctatgatatctagcatgtatgttaaaattggcattggatacattaaaattacaataa 28144237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 124
Target Start/End: Complemental strand, 8706878 - 8706823
Alignment:
Q  69 tgaaacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgac 124  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  8706878 tgaaacacccctactagaaatcacctaggatatctagcatgagtgttaaacttgac 8706823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 8519171 - 8519224
Alignment:
Q  190 cctcagaaatagttccactgacgtgtactttatatggtccagctacttctgctt 243  Q
    |||| |||||| | ||||||||||| ||||||||||||||||||| || |||||    
T  8519171 cctctgaaataataccactgacgtgaactttatatggtccagctatttttgctt 8519224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 72 - 244
Target Start/End: Original strand, 89614 - 89788
Alignment:
Q  72 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataaataaata--ctctgaacaaatc 169  Q
    ||||||||| |||||||||  ||||||||||||||||||| ||||||||||     ||||||||||||||||||||||||||| |  |||||||||||||    
T  89614 aacacccctactagaaattttctaggatatctagcatgtgcgttaaacttggtactggatacattaaaattacaataaataaaaattctctgaacaaatc 89713  T
Q  170 atagaatttctcgcctgttacctcagaaatagttccactgacgtgtactttatatggtccagctacttctgcttc 244  Q
    |||||||||||||| |||||||||||||||||| |||| |||||||||||||||| |||||||||| | ||||||    
T  89714 atagaatttctcgcttgttacctcagaaatagtaccaccgacgtgtactttatatagtccagctacgtttgcttc 89788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 19440498 - 19440579
Alignment:
Q  68 ttgaaacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 149  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||||| | | || |||||||||||||||||||    
T  19440498 ttgaaacatccctgctagaaattacctaggatatctagcgtgtgtgttaaacttggcattgggtacattaaaattacaataa 19440579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 72 - 148
Target Start/End: Complemental strand, 2747387 - 2747311
Alignment:
Q  72 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaata 148  Q
    ||||||||| |||||||||||||||||||||||| |||| ||||||||||| | | |||||||||||||||||||||    
T  2747387 aacacccctactagaaattacctaggatatctagaatgtatgttaaacttggcattggatacattaaaattacaata 2747311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 72 - 146
Target Start/End: Complemental strand, 14521959 - 14521885
Alignment:
Q  72 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaa 146  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||| |   |||||||||||||||||||    
T  14521959 aacacccctactagaaattacctaggatatctagcatgagtgttaaacttggcaatggatacattaaaattacaa 14521885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 28034112 - 28034189
Alignment:
Q  72 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 149  Q
    ||||||||| ||||||||| || |||||||||||||||||||||||| ||| | | ||||||||||||||||||||||    
T  28034112 aacacccctactagaaatttccaaggatatctagcatgtgtgttaaaattggcattggatacattaaaattacaataa 28034189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 5835055 - 5835135
Alignment:
Q  69 tgaaacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 149  Q
    |||||||||||| ||| |||||||||||||||||||||||| || ||||||||| | | ||||||||||||||||| ||||    
T  5835055 tgaaacacccctactataaattacctaggatatctagcatgagtattaaacttggcattggatacattaaaattaccataa 5835135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 72 - 148
Target Start/End: Original strand, 37489146 - 37489222
Alignment:
Q  72 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaata 148  Q
    ||||||||| ||| || || ||||||||||||||||||||||||||||||| | | |||||||||||||||||||||    
T  37489146 aacacccctactaaaattttcctaggatatctagcatgtgtgttaaacttggcattggatacattaaaattacaata 37489222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 18110863 - 18110933
Alignment:
Q  72 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaatt 142  Q
    ||||||||| ||||||||| |||||||||||||||||| |||||||||||| |   |||||||||||||||    
T  18110863 aacacccctactagaaatttcctaggatatctagcatgagtgttaaacttggcaatggatacattaaaatt 18110933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 11418187 - 11418252
Alignment:
Q  84 agaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 149  Q
    |||||||||||||||||||||||| ||| |||||||||| | | | ||||||||||||||||||||    
T  11418187 agaaattacctaggatatctagcacgtgcgttaaacttggcattgcatacattaaaattacaataa 11418252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 144
Target Start/End: Complemental strand, 19360184 - 19360112
Alignment:
Q  72 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattac 144  Q
    ||||||||| ||||||||||| || ||||||||||||| |||||||||||| |   |||||||||||||||||    
T  19360184 aacacccctactagaaattacatacgatatctagcatgagtgttaaacttggcaatggatacattaaaattac 19360112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 244
Target Start/End: Original strand, 5938284 - 5938340
Alignment:
Q  188 tacctcagaaatagttccactgacgtgtactttatatggtccagctacttctgcttc 244  Q
    |||||| |||||| | ||||| ||||| ||||||||||||||||| |||||||||||    
T  5938284 tacctctgaaataataccacttacgtgaactttatatggtccagcgacttctgcttc 5938340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 4e-22; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 72 - 149
Target Start/End: Complemental strand, 20811331 - 20811254
Alignment:
Q  72 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 149  Q
    ||||||||| |||||| |||| ||||||||||||||||||||||||||||| | | ||||||||||||||||||||||    
T  20811331 aacacccctactagaatttacgtaggatatctagcatgtgtgttaaacttggcattggatacattaaaattacaataa 20811254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 72 - 144
Target Start/End: Original strand, 5556895 - 5556967
Alignment:
Q  72 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattac 144  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||| |   |||||||||||||||||    
T  5556895 aacacccctactagaaattacctaggatatctagcatgagtgttaaacttggcaatggatacattaaaattac 5556967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 149
Target Start/End: Complemental strand, 4844732 - 4844657
Alignment:
Q  72 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 149  Q
    ||||||||| ||||||||| |||||||||||||||||  ||||||||||||   | ||||||||||||||||||||||    
T  4844732 aacacccctactagaaatttcctaggatatctagcat--gtgttaaacttgggattggatacattaaaattacaataa 4844657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 72 - 146
Target Start/End: Complemental strand, 304 - 230
Alignment:
Q  72 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaa 146  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||| |   |||||||||||||||||||    
T  304 aacacccctactagaaattacctaggatatctagcatgagtgttaaacttggcaatggatacattaaaattacaa 230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 72 - 146
Target Start/End: Complemental strand, 37761 - 37687
Alignment:
Q  72 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaa 146  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||| |   |||||||||||||| ||||    
T  37761 aacacccctactagaaattacctaggatatctagcatgagtgttaaacttggcagtggatacattaaaatgacaa 37687  T

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Target: scaffold0043 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 67 - 149
Target Start/End: Complemental strand, 70449 - 70367
Alignment:
Q  67 tttgaaacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 149  Q
    |||| ||||||||| ||||| ||| ||||||||||||||||||||||||||||||| | | | ||||||||||||||||||||    
T  70449 tttgtaacacccctactagacatttcctaggatatctagcatgtgtgttaaacttggcattgaatacattaaaattacaataa 70367  T

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Target: scaffold0060 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 45495 - 45423
Alignment:
Q  77 ccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattacaataa 149  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| | |  |||||||||||| ||||||    
T  45495 ccctactagaaattacctaggatatctagcatgtgtgttaaacttgacattgagtacattaaaatttcaataa 45423  T

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Target: chr5 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 72 - 144
Target Start/End: Original strand, 41527650 - 41527722
Alignment:
Q  72 aacacccctgctagaaattacctaggatatctagcatgtgtgttaaacttgacgtcggatacattaaaattac 144  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||| |   |||||||||||||||||    
T  41527650 aacacccctactagaaattacctaggatatctagcatgagtgttaaacttggcaatggatacattaaaattac 41527722  T

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Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 247
Target Start/End: Complemental strand, 37456353 - 37456309
Alignment:
Q  203 tccactgacgtgtactttatatggtccagctacttctgcttcatc 247  Q
    |||||||||||| ||||| ||||||||||  ||||||||||||||    
T  37456353 tccactgacgtgaactttgtatggtccagtgacttctgcttcatc 37456309  T

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Target: scaffold0018 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 149
Target Start/End: Complemental strand, 66310 - 66229
Alignment:
Q  69 tgaaacacccctgctagaaattacctaggatatctagcat-gtgtgttaaacttgacgtcggatacattaaaattacaataa 149  Q
    |||||||||||| ||||||||||||||| ||||||||||| |||||||||||||| | | || ||| |||||||||||||||    
T  66310 tgaaacacccctactagaaattacctagaatatctagcatggtgtgttaaacttggcattgggtacgttaaaattacaataa 66229  T

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