View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6020_high_2 (Length: 869)
Name: NF6020_high_2
Description: NF6020
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6020_high_2 |
 |  |
|
| [»] scaffold0074 (1 HSPs) |
 |  |  |
|
| [»] scaffold0171 (2 HSPs) |
 |  |  |
|
| [»] scaffold0362 (1 HSPs) |
 |  |  |
|
| [»] scaffold0386 (2 HSPs) |
 |  |  |
|
| [»] scaffold0108 (1 HSPs) |
 |  |  |
|
| [»] scaffold0103 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr6 (Bit Score: 511; Significance: 0; HSPs: 17)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 511; E-Value: 0
Query Start/End: Original strand, 232 - 852
Target Start/End: Complemental strand, 6178520 - 6177894
Alignment:
| Q |
232 |
atctattgaagttcaatgaaagaatttcatccattcttgatccttaacaatcaagctaatatttccaacatatgaccaacattcaagaacaatgaaagat |
331 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6178520 |
atctattgaagttcaatgaaagaatttcatccattcttaatccttaacaatcaagctaatacttccaacatatgaccaacattcaagaacaatgaaagat |
6178421 |
T |
 |
| Q |
332 |
ttcttgtctttgatgagcatcttctataattcaaactannnnnnnn--cctttatccaattcttatgacatttttataaaatctttttaaagggtactaa |
429 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6178420 |
ttcttgtctttgatgagcatcttctataattcaaactattttttttttcccttatccaattcttatgacatttttataaaatctttttaaagggtactaa |
6178321 |
T |
 |
| Q |
430 |
agattaataagatttaaccaaaagttttgcatgaaagacaagtgtcttgct----gtaaggaactattgtttacctctcctataaatcaagtttatttgc |
525 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6178320 |
agattaataagatttaaccaaatgttttgcatgaaagacaagtgtcttgctatatgtaaggaactattgtttacctctcctataaatcaagtttatttgc |
6178221 |
T |
 |
| Q |
526 |
accatttcaatcatcccataaaatagtaatacaacaataagaattagagtttatggaaagtgatcgaaaaatacaggaaggaaatagagtttctcctgta |
625 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
6178220 |
accatttcaatcatcccataaaatagtaacacaacaacaagaattagagtttatggagagtgagcgaaaaatacaggaaggaaatagagtttctcctgta |
6178121 |
T |
 |
| Q |
626 |
aggtttcatctggtgttagtatttctctatttcaagagagaaggtaacttgtctatgcttttatttagagaggttttgtaatttctcccacttaataaaa |
725 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6178120 |
aggtttcctctggtgttagtatttctctatttcaagagagaaggtaacttgtctatgcttttatttagagaggttttgtaatttctcccacttaataaaa |
6178021 |
T |
 |
| Q |
726 |
gttatctactcttacataccttgtggttttttcctccttatttgttgtggagttcctgatggatgaaattgacaagtgcatcaaatcgtaacaagtaaca |
825 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
6178020 |
tttatctactcttacataccttgtggttttttcttccttatttgttgtgggatttctgatggatcaaattgacaagtgcatcaaatcgtaacaagtaaca |
6177921 |
T |
 |
| Q |
826 |
aagtagtaagtttttggtcttcacagg |
852 |
Q |
| |
|
||||||||||||||| ||||||||||| |
|
|
| T |
6177920 |
aagtagtaagttttttgtcttcacagg |
6177894 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 6178726 - 6178582
Alignment:
| Q |
26 |
agggtgtttaccacttttcctttcatgaacaaaaaactaattatgggagataattattaattacacatttgaaaggataactacatacccaatagtgtgg |
125 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6178726 |
agggtgtttaccacttttcctttcatgaacaaaaaactaattatgggagataattattaattacacatttgaaaggataactacatacccaatagtgtgg |
6178627 |
T |
 |
| Q |
126 |
tcaaggtgaaaaaacatatattttggctacgagaatacgtgttgg |
170 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
6178626 |
tcaaggtgaaaaaacacatattttggctacgagaatacgtgttgg |
6178582 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 557 - 840
Target Start/End: Complemental strand, 6174357 - 6174074
Alignment:
| Q |
557 |
caacaataagaattagagtttatggaaagtgatcgaaaaatacaggaaggaaatagagtttctcctgtaaggtttcatctggtgttagtatttctctatt |
656 |
Q |
| |
|
|||||| ||||||||||| || ||| ||||| |||||||| || ||||||||| |||||||||| ||||| ||| ||| || ||||||||||| |||| |
|
|
| T |
6174357 |
caacaacaagaattagagcttgcggatagtgagagaaaaatatagaaaggaaatatagtttctcctataaggattcttctagttttagtatttctttatt |
6174258 |
T |
 |
| Q |
657 |
tcaagagagaaggtaactt-gtctatgcttttatttagagaggttttgtaatttctcccacttaataaaagttatctactcttacataccttgtggtttt |
755 |
Q |
| |
|
||||||||||||||||||| | || | ||| ||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||| ||| |||| |
|
|
| T |
6174257 |
tcaagagagaaggtaactttgcctctacttgtatttagagaggtcttgtaatttctcccacttaatgaaagttat-tactcttacataccccgtgatttt |
6174159 |
T |
 |
| Q |
756 |
ttcctccttatttgttgtggagttcctgatggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagttttt |
840 |
Q |
| |
|
||| |||||||||||||||| || ||||||||| |||||| ||||||||||||||||||| ||||| ||||||| ||||||||| |
|
|
| T |
6174158 |
ttcttccttatttgttgtgggatttctgatggatcaaattggcaagtgcatcaaatcgtaaaaagtagcaaagtactaagttttt |
6174074 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 453 - 544
Target Start/End: Complemental strand, 6174656 - 6174556
Alignment:
| Q |
453 |
gttttgcatgaaagacaagtgtcttgc----tgtaagga---actattgtttacctctcctataa--atcaagtttatttgcaccatttcaatcatccca |
543 |
Q |
| |
|
||||||||||||| ||||||| ||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
6174656 |
gttttgcatgaaacacaagtggcttgctatatgtaaggaactactattgtttacctctcctataaatatcaagtttatttgcaccatttcaatcatccca |
6174557 |
T |
 |
| Q |
544 |
t |
544 |
Q |
| |
|
| |
|
|
| T |
6174556 |
t |
6174556 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 254 - 312
Target Start/End: Complemental strand, 6172037 - 6171979
Alignment:
| Q |
254 |
aatttcatccattcttgatccttaacaatcaagctaatatttccaacatatgaccaaca |
312 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
6172037 |
aatttcatccattcttaatccttaacaatcaaactaatttttccaacatatgaccaaca |
6171979 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 480 - 738
Target Start/End: Complemental strand, 23012889 - 23012623
Alignment:
| Q |
480 |
tgtaaggaactattgtttacctctcctataaat--caagtttatttgcaccatttcaatcatcccataaaatagtaatacaacaataagaattagagttt |
577 |
Q |
| |
|
||||||||| ||| | ||||||||| ||||||| |||| | ||||||||||||| |||||||||| || | |||| ||||||| ||||||||||| || |
|
|
| T |
23012889 |
tgtaaggaaatatggattacctctcttataaataccaagatcatttgcaccatttttatcatcccatcaagttgtaacacaacaacaagaattagagctt |
23012790 |
T |
 |
| Q |
578 |
atggaaagt--gatcgaaaaatacaggaaggaaatagagtttctcctgtaaggtttcatctggtgttagtatttctctatttcaagagaga-ag---gta |
671 |
Q |
| |
|
| || ||| || ||||||| || ||||||||| ||| ||| |||||||||||| | ||| ||||||| | |||||||||||||| || ||| |
|
|
| T |
23012789 |
gttgagagttagagaaaaaaatatagaaaggaaatatagtctcttctgtaaggtttctccaagtgctagtattcccatatttcaagagagagagagagta |
23012690 |
T |
 |
| Q |
672 |
acttgtctatgcttttatttagagaggttttgtaatttctcccacttaataaaagttatctactctt |
738 |
Q |
| |
|
| |||||| | || |||||| |||||| ||| |||||||| |||||| | |||||| ||||||||| |
|
|
| T |
23012689 |
atttgtctctcattgtatttaaagaggtcttgaaatttctctcacttagtgaaagttctctactctt |
23012623 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 780 - 837
Target Start/End: Complemental strand, 13782471 - 13782414
Alignment:
| Q |
780 |
cctgatggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagtt |
837 |
Q |
| |
|
||||||||| |||||||||||||||| ||||||||||||| ||| ||||||||||||| |
|
|
| T |
13782471 |
cctgatggacgaaattgacaagtgcaccaaatcgtaacaattaataaagtagtaagtt |
13782414 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 780 - 837
Target Start/End: Complemental strand, 13789793 - 13789736
Alignment:
| Q |
780 |
cctgatggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagtt |
837 |
Q |
| |
|
||||||||| |||||||||||||||| ||||||||||||| ||| ||||||||||||| |
|
|
| T |
13789793 |
cctgatggacgaaattgacaagtgcaccaaatcgtaacaattaataaagtagtaagtt |
13789736 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 780 - 837
Target Start/End: Complemental strand, 13804048 - 13803991
Alignment:
| Q |
780 |
cctgatggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagtt |
837 |
Q |
| |
|
||||||||| |||||||||||||||| ||||||||||||| ||| ||||||||||||| |
|
|
| T |
13804048 |
cctgatggacgaaattgacaagtgcaccaaatcgtaacaattaataaagtagtaagtt |
13803991 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 782 - 838
Target Start/End: Complemental strand, 15576253 - 15576197
Alignment:
| Q |
782 |
tgatggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagttt |
838 |
Q |
| |
|
||||||| ||||||| |||||||||||||||||||||||||| |||||||| ||||| |
|
|
| T |
15576253 |
tgatggacgaaattggcaagtgcatcaaatcgtaacaagtaataaagtagtcagttt |
15576197 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 782 - 834
Target Start/End: Complemental strand, 13194341 - 13194289
Alignment:
| Q |
782 |
tgatggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaa |
834 |
Q |
| |
|
||||||| ||||||| |||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
13194341 |
tgatggacgaaattggcaagtgcaccaaatcgtaacaagtaataaagtagtaa |
13194289 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 782 - 838
Target Start/End: Original strand, 17858937 - 17858993
Alignment:
| Q |
782 |
tgatggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagttt |
838 |
Q |
| |
|
||||||| |||||||||| ||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
17858937 |
tgatggacgaaattgacatgtgcatcaaatagtaacaagtaattaagtagtaagttt |
17858993 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 536 - 738
Target Start/End: Original strand, 18967864 - 18968070
Alignment:
| Q |
536 |
tcatcccataaaatagtaatacaacaataagaattagagtttatggaaagtgatcg-aaaaatacaggaaggaaatagagtttctcctgtaaggtttcat |
634 |
Q |
| |
|
||||| ||| || |||||| ||||||| ||||||||||| || | || ||||| | ||||||| | |||||||| |||||||| ||| ||||||| |
|
|
| T |
18967864 |
tcatcacatcaagtagtaacacaacaacaagaattagagcttgttgagagtgagaggaaaaatataaagaggaaatatagtttctcttgtgaggtttctc |
18967963 |
T |
 |
| Q |
635 |
ctggtgttagtatttctctatttcaagagagaaggtaacttgtctatgcttttatttagagag--gttttgtaatt-tctcccacttaataaaagttatc |
731 |
Q |
| |
|
|| ||||||||||| |||||||| |||||| | ||| |||||| | ||| ||||||||||| || |||||||| ||| ||||||| | |||||| || |
|
|
| T |
18967964 |
ctagtgttagtattctcctatttcatgagagaggctaatttgtctctccttgtatttagagagaagtcttgtaattgtcttccacttagtgaaagttttc |
18968063 |
T |
 |
| Q |
732 |
tactctt |
738 |
Q |
| |
|
||||||| |
|
|
| T |
18968064 |
tactctt |
18968070 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 780 - 834
Target Start/End: Complemental strand, 22727304 - 22727250
Alignment:
| Q |
780 |
cctgatggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaa |
834 |
Q |
| |
|
||||||||| ||||||||||||||| ||||| ||||||||||| |||||||||| |
|
|
| T |
22727304 |
cctgatggacaaaattgacaagtgcaccaaattgtaacaagtaataaagtagtaa |
22727250 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 781 - 838
Target Start/End: Original strand, 6091919 - 6091976
Alignment:
| Q |
781 |
ctgatggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagttt |
838 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||||||| || ||| ||||||| |||||| |
|
|
| T |
6091919 |
ctgatggacgaaattgacaagtgcattaaatcgtaaaaaataataaagtagaaagttt |
6091976 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 794 - 838
Target Start/End: Original strand, 9395432 - 9395476
Alignment:
| Q |
794 |
ttgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagttt |
838 |
Q |
| |
|
|||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
9395432 |
ttgacaagtgcaacaaatcgtaacaagtaatgaagtagtaagttt |
9395476 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 793 - 838
Target Start/End: Complemental strand, 8037097 - 8037052
Alignment:
| Q |
793 |
attgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagttt |
838 |
Q |
| |
|
|||| |||||||| |||||||||||||||| |||||||||||||| |
|
|
| T |
8037097 |
attggcaagtgcactaaatcgtaacaagtaataaagtagtaagttt |
8037052 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0074 (Bit Score: 61; Significance: 1e-25; HSPs: 1)
Name: scaffold0074
Description:
Target: scaffold0074; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 480 - 738
Target Start/End: Complemental strand, 27618 - 27350
Alignment:
| Q |
480 |
tgtaaggaactattgtttacctctcctataaat--caagtttatttgcac---catttcaa-tcatcccataaaatagtaatacaacaataagaattaga |
573 |
Q |
| |
|
|||||||||||| | ||||||||||||||||| |||||| |||||||| ||| ||| ||||| ||| ||||||||| ||||||| |||||||||| |
|
|
| T |
27618 |
tgtaaggaactaaggcttacctctcctataaatagcaagttcatttgcacaatcatctcatctcatcacatcaaatagtaacacaacaacaagaattaga |
27519 |
T |
 |
| Q |
574 |
gtttatggaaagtgatcg-aaaaatacaggaaggaaatagagtttctcctgtaaggtttcatctggtgttagtatttctctatttcaagagagaaggtaa |
672 |
Q |
| |
|
| || | || ||||| | ||||||| || |||||||| |||||||||||| ||||||| || ||||||||||| ||||||||||||||| ||||| |
|
|
| T |
27518 |
gcttgttgagagtgagaggaaaaatatagagaggaaatatagtttctcctgtgaggtttctcctagtgttagtattcacctatttcaagagagatggtaa |
27419 |
T |
 |
| Q |
673 |
cttgtctatgcttttatttagagag--gttttgtaatt-tctcccacttaataaaagttatctactctt |
738 |
Q |
| |
|
|||||| | ||| ||||||||||| || |||||||| ||| ||||||| | |||||| ||||||||| |
|
|
| T |
27418 |
tttgtctctccttgtatttagagagaagtattgtaattgtcttccacttagtgaaagttctctactctt |
27350 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 53; Significance: 6e-21; HSPs: 10)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 536 - 735
Target Start/End: Original strand, 10427267 - 10427470
Alignment:
| Q |
536 |
tcatcccataaaatagtaatacaacaataagaattagagtttatggaaagtgatcg-aaaaatacaggaaggaaatagagtttctcctgtaaggtttcat |
634 |
Q |
| |
|
||||| ||| || |||||| ||||||| ||||||||||| || | || ||||| | ||||||| || |||||||| |||||||||||| ||||||| |
|
|
| T |
10427267 |
tcatcacatcaagtagtaacacaacaacaagaattagagcttgttgagagtgagaggaaaaatatagagaggaaatatagtttctcctgtgaggtttctc |
10427366 |
T |
 |
| Q |
635 |
ctggtgttagtatttctctatttcaagagagaaggtaacttgtctatgcttttatttagagag--gttttgtaatt-tctcccacttaataaaagttatc |
731 |
Q |
| |
|
|| ||||||||||| ||||||||||||||| ||||| |||||| | ||| ||||||||||| || |||||||| ||| ||||||| | ||||||||| |
|
|
| T |
10427367 |
ctagtgttagtattctcctatttcaagagagagggtaatttgtctctccttgtatttagagagaagtcttgtaattgtcttccacttagtgaaagttatc |
10427466 |
T |
 |
| Q |
732 |
tact |
735 |
Q |
| |
|
|||| |
|
|
| T |
10427467 |
tact |
10427470 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 792 - 838
Target Start/End: Complemental strand, 30797754 - 30797708
Alignment:
| Q |
792 |
aattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagttt |
838 |
Q |
| |
|
||||| |||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
30797754 |
aattggcaagtgcatcaaatcgtaacaagtaataaagtagtaagttt |
30797708 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 785 - 838
Target Start/End: Original strand, 10450301 - 10450354
Alignment:
| Q |
785 |
tggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagttt |
838 |
Q |
| |
|
|||||||||||| |||||||| ||||||||||||| ||| |||||||||||||| |
|
|
| T |
10450301 |
tggatgaaattggcaagtgcaccaaatcgtaacaaataataaagtagtaagttt |
10450354 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 790 - 838
Target Start/End: Original strand, 13553465 - 13553513
Alignment:
| Q |
790 |
gaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagttt |
838 |
Q |
| |
|
|||||||||||||| |||||||||||| |||||| |||||||||||||| |
|
|
| T |
13553465 |
gaaattgacaagtgtatcaaatcgtaataagtaataaagtagtaagttt |
13553513 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 790 - 838
Target Start/End: Complemental strand, 20717995 - 20717947
Alignment:
| Q |
790 |
gaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagttt |
838 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||| |||||||||||||| |
|
|
| T |
20717995 |
gaaattggcaagtgcaccaaatcgtaacaagtaataaagtagtaagttt |
20717947 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 782 - 838
Target Start/End: Complemental strand, 22220009 - 22219953
Alignment:
| Q |
782 |
tgatggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagttt |
838 |
Q |
| |
|
||||||| |||||||||||||||| ||||| |||||||||| |||||||||||||| |
|
|
| T |
22220009 |
tgatggacgaaattgacaagtgcactaaatcataacaagtaataaagtagtaagttt |
22219953 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 792 - 837
Target Start/End: Complemental strand, 25367780 - 25367735
Alignment:
| Q |
792 |
aattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagtt |
837 |
Q |
| |
|
|||||||||||||| ||||||| ||||||||| ||||||||||||| |
|
|
| T |
25367780 |
aattgacaagtgcaccaaatcgaaacaagtaataaagtagtaagtt |
25367735 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 790 - 838
Target Start/End: Original strand, 47023560 - 47023608
Alignment:
| Q |
790 |
gaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagttt |
838 |
Q |
| |
|
||||||| ||||| |||||||||||||||||||| || ||||||||||| |
|
|
| T |
47023560 |
gaaattggcaagtacatcaaatcgtaacaagtaataaggtagtaagttt |
47023608 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 793 - 838
Target Start/End: Original strand, 7023034 - 7023079
Alignment:
| Q |
793 |
attgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagttt |
838 |
Q |
| |
|
||||| ||||||| ||||||||||||| ||| |||||||||||||| |
|
|
| T |
7023034 |
attgataagtgcaccaaatcgtaacaaataataaagtagtaagttt |
7023079 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 781 - 838
Target Start/End: Original strand, 12805767 - 12805824
Alignment:
| Q |
781 |
ctgatggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagttt |
838 |
Q |
| |
|
|||||| | ||||||| || |||| ||||||||||||||||| |||||||||||||| |
|
|
| T |
12805767 |
ctgatgaacgaaattggtaaatgcaccaaatcgtaacaagtaataaagtagtaagttt |
12805824 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 52; Significance: 2e-20; HSPs: 20)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 536 - 738
Target Start/End: Complemental strand, 16183961 - 16183755
Alignment:
| Q |
536 |
tcatcccataaaatagtaatacaacaataagaattagagtttatggaaagtgatcg-aaaaatacaggaaggaaatagagtttctcctgtaaggtttcat |
634 |
Q |
| |
|
||||| ||| || |||||| ||||||| ||||||||||| || | || ||||| | ||||||| || |||||||| |||||||||||| ||||||| |
|
|
| T |
16183961 |
tcatcacatcaagtagtaacacaacaacaagaattagagcttgttgagagtgagaggaaaaatatagagaggaaatatagtttctcctgtgaggtttctc |
16183862 |
T |
 |
| Q |
635 |
ctggtgttagtatttctctatttcaagagagaaggtaacttgtctatgcttttatttag--agaggttttgtaatt-tctcccacttaataaaagttatc |
731 |
Q |
| |
|
|| ||||||||||| ||||||||||||||| ||||| |||||| | ||| ||||||| |||||| |||||||| ||| ||||||| | |||||| || |
|
|
| T |
16183861 |
ctagtgttagtattctcctatttcaagagagagggtaatttgtctctccttgtatttagagagaggtcttgtaattgtcttccacttagtgaaagttctc |
16183762 |
T |
 |
| Q |
732 |
tactctt |
738 |
Q |
| |
|
||||||| |
|
|
| T |
16183761 |
tactctt |
16183755 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 782 - 838
Target Start/End: Complemental strand, 7143638 - 7143582
Alignment:
| Q |
782 |
tgatggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagttt |
838 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||| |
|
|
| T |
7143638 |
tgatggatgaaattgacaagtgcaccaaatcgtaacaagtaataaagtagcaagttt |
7143582 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 792 - 837
Target Start/End: Original strand, 2352143 - 2352188
Alignment:
| Q |
792 |
aattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagtt |
837 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
2352143 |
aattgacaagtgcatcaaatcgtaacaagtaataaagtagtaagtt |
2352188 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 782 - 838
Target Start/End: Original strand, 21544680 - 21544736
Alignment:
| Q |
782 |
tgatggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagttt |
838 |
Q |
| |
|
||||||| ||||||| |||||||| ||||||||||||||||| |||||||||||||| |
|
|
| T |
21544680 |
tgatggacgaaattggcaagtgcaccaaatcgtaacaagtaataaagtagtaagttt |
21544736 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 792 - 838
Target Start/End: Complemental strand, 7152173 - 7152127
Alignment:
| Q |
792 |
aattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagttt |
838 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| |||||||||||||| |
|
|
| T |
7152173 |
aattgacaagtgcaccaaatcgtaacaagtaataaagtagtaagttt |
7152127 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 781 - 838
Target Start/End: Complemental strand, 7494556 - 7494499
Alignment:
| Q |
781 |
ctgatggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagttt |
838 |
Q |
| |
|
|||||||| ||||||| |||||||| ||||||||||||||||| ||| |||||||||| |
|
|
| T |
7494556 |
ctgatggacgaaattggcaagtgcaccaaatcgtaacaagtaataaattagtaagttt |
7494499 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 790 - 838
Target Start/End: Original strand, 9687088 - 9687136
Alignment:
| Q |
790 |
gaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagttt |
838 |
Q |
| |
|
|||||||||||||| |||||||||||| |||||| |||||||||||||| |
|
|
| T |
9687088 |
gaaattgacaagtgtatcaaatcgtaataagtaataaagtagtaagttt |
9687136 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 795 - 838
Target Start/End: Complemental strand, 18497248 - 18497205
Alignment:
| Q |
795 |
tgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagttt |
838 |
Q |
| |
|
||||||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
18497248 |
tgacaagtgcaccaaatcgtaacaagtaacaatgtagtaagttt |
18497205 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 790 - 840
Target Start/End: Original strand, 4091354 - 4091404
Alignment:
| Q |
790 |
gaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagttttt |
840 |
Q |
| |
|
||||||| |||||| | ||||||||||||||||| |||||||||||||||| |
|
|
| T |
4091354 |
gaaattggcaagtgtaccaaatcgtaacaagtaataaagtagtaagttttt |
4091404 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 802 - 840
Target Start/End: Complemental strand, 9071436 - 9071398
Alignment:
| Q |
802 |
tgcatcaaatcgtaacaagtaacaaagtagtaagttttt |
840 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
9071436 |
tgcatcaaatcgtaacaagtaaaaaagtagtaagttttt |
9071398 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 792 - 829
Target Start/End: Original strand, 7325834 - 7325871
Alignment:
| Q |
792 |
aattgacaagtgcatcaaatcgtaacaagtaacaaagt |
829 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
7325834 |
aattgacaagtgcatcaaatcgtaacaagtaataaagt |
7325871 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 781 - 850
Target Start/End: Complemental strand, 14074548 - 14074479
Alignment:
| Q |
781 |
ctgatggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagtttttggtcttcaca |
850 |
Q |
| |
|
|||||||| |||| || ||||||| |||||||||||||||| |||||||||||||| | ||||||||| |
|
|
| T |
14074548 |
ctgatggacgaaactggaaagtgcacaaaatcgtaacaagtaataaagtagtaagtttatcgtcttcaca |
14074479 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 781 - 850
Target Start/End: Complemental strand, 14384576 - 14384507
Alignment:
| Q |
781 |
ctgatggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagtttttggtcttcaca |
850 |
Q |
| |
|
|||||||| |||| || ||||||| |||||||||||||||| |||||||||||||| | ||||||||| |
|
|
| T |
14384576 |
ctgatggacgaaactggaaagtgcacaaaatcgtaacaagtaataaagtagtaagtttatcgtcttcaca |
14384507 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 790 - 834
Target Start/End: Complemental strand, 3401130 - 3401086
Alignment:
| Q |
790 |
gaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaa |
834 |
Q |
| |
|
|||||||||||||||| |||||||||||||||| |||||||||| |
|
|
| T |
3401130 |
gaaattgacaagtgcacaaaatcgtaacaagtaataaagtagtaa |
3401086 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 798 - 838
Target Start/End: Original strand, 7776367 - 7776407
Alignment:
| Q |
798 |
caagtgcatcaaatcgtaacaagtaacaaagtagtaagttt |
838 |
Q |
| |
|
|||||||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
7776367 |
caagtgcaccaaatcttaacaagtaacaaagtagtaagttt |
7776407 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 790 - 838
Target Start/End: Original strand, 18494563 - 18494611
Alignment:
| Q |
790 |
gaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagttt |
838 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||| || ||||||||||| |
|
|
| T |
18494563 |
gaaattggcaagtgcaccaaatcgtaacaagtaataaggtagtaagttt |
18494611 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 784 - 831
Target Start/End: Complemental strand, 3094236 - 3094189
Alignment:
| Q |
784 |
atggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtag |
831 |
Q |
| |
|
||||| |||||||||||| ||| ||||||||||||||||| ||||||| |
|
|
| T |
3094236 |
atggaggaaattgacaagagcaccaaatcgtaacaagtaataaagtag |
3094189 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 704 - 738
Target Start/End: Complemental strand, 5102749 - 5102715
Alignment:
| Q |
704 |
taatttctcccacttaataaaagttatctactctt |
738 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||| |
|
|
| T |
5102749 |
taatttctcccacttagtaaaagttatctactctt |
5102715 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 796 - 837
Target Start/End: Complemental strand, 10925122 - 10925081
Alignment:
| Q |
796 |
gacaagtgcatcaaatcgtaacaagtaacaaagtagtaagtt |
837 |
Q |
| |
|
|||||||||| ||||||||| ||||||| ||||||||||||| |
|
|
| T |
10925122 |
gacaagtgcaccaaatcgtatcaagtaataaagtagtaagtt |
10925081 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 796 - 833
Target Start/End: Original strand, 11466915 - 11466952
Alignment:
| Q |
796 |
gacaagtgcatcaaatcgtaacaagtaacaaagtagta |
833 |
Q |
| |
|
||||||||||||||||||||| |||||| ||||||||| |
|
|
| T |
11466915 |
gacaagtgcatcaaatcgtaagaagtaataaagtagta |
11466952 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 52; Significance: 2e-20; HSPs: 10)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 536 - 738
Target Start/End: Original strand, 46191218 - 46191424
Alignment:
| Q |
536 |
tcatcccataaaatagtaatacaacaataagaattagagtttatggaaagtgatcg-aaaaatacaggaaggaaatagagtttctcctgtaaggtttcat |
634 |
Q |
| |
|
|||||| || || |||||| ||||||| ||||||||||| || | || ||||| | ||||||| || |||||||| |||||||||||| ||||||| |
|
|
| T |
46191218 |
tcatccaatcaagtagtaacacaacaacaagaattagagcttgttgagagtgagaggaaaaatatagagaggaaatatagtttctcctgtgaggtttctc |
46191317 |
T |
 |
| Q |
635 |
ctggtgttagtatttctctatttcaagagagaaggtaacttgtctatgcttttatttagagag--gttttgtaatt-tctcccacttaataaaagttatc |
731 |
Q |
| |
|
|| ||||||||||| ||||||||||||||| ||||| |||||| | ||| ||||||||||| || |||||||| ||| ||||||| | |||||| || |
|
|
| T |
46191318 |
ctagtgttagtattctcctatttcaagagagagggtaatttgtctctccttctatttagagagaagtcttgtaattgtcttccacttagtgaaagttctc |
46191417 |
T |
 |
| Q |
732 |
tactctt |
738 |
Q |
| |
|
||||||| |
|
|
| T |
46191418 |
tactctt |
46191424 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 782 - 838
Target Start/End: Complemental strand, 27682993 - 27682937
Alignment:
| Q |
782 |
tgatggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagttt |
838 |
Q |
| |
|
||||||| |||||||||||||||| |||| |||||||||||| |||||||||||||| |
|
|
| T |
27682993 |
tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagttt |
27682937 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 782 - 838
Target Start/End: Complemental strand, 34522184 - 34522128
Alignment:
| Q |
782 |
tgatggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagttt |
838 |
Q |
| |
|
||||||| ||||||| |||||||| ||||||||||||||||| ||| |||||||||| |
|
|
| T |
34522184 |
tgatggaagaaattggcaagtgcaccaaatcgtaacaagtaataaaatagtaagttt |
34522128 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 782 - 838
Target Start/End: Complemental strand, 50048310 - 50048254
Alignment:
| Q |
782 |
tgatggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagttt |
838 |
Q |
| |
|
||||||| ||||||| |||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
50048310 |
tgatggacgaaattggcaagtgcatcaaattataacaagtaataaagtagtaagttt |
50048254 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 784 - 838
Target Start/End: Original strand, 17836791 - 17836845
Alignment:
| Q |
784 |
atggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagttt |
838 |
Q |
| |
|
||||| ||||||| |||||||| |||||| |||||||||| |||||||||||||| |
|
|
| T |
17836791 |
atggacgaaattggcaagtgcaccaaatcataacaagtaagaaagtagtaagttt |
17836845 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 638 - 738
Target Start/End: Original strand, 4130175 - 4130278
Alignment:
| Q |
638 |
gtgttagtatttctctatttcaagagagaaggtaacttgtctatgcttttatttagagag--gttttgtaatt-tctcccacttaataaaagttatctac |
734 |
Q |
| |
|
||||||||||| ||||||||||||||| ||||| |||||| | ||| ||||||||||| || |||||||| ||| ||||||| | |||||| ||||| |
|
|
| T |
4130175 |
gtgttagtattgtcctatttcaagagagagggtaatttgtctctccttgtatttagagagaagtcttgtaattatcttccacttagtgaaagttctctac |
4130274 |
T |
 |
| Q |
735 |
tctt |
738 |
Q |
| |
|
|||| |
|
|
| T |
4130275 |
tctt |
4130278 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 790 - 838
Target Start/End: Complemental strand, 23224680 - 23224632
Alignment:
| Q |
790 |
gaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagttt |
838 |
Q |
| |
|
||||||| ||||||| |||||||||||||||||| || ||||||||||| |
|
|
| T |
23224680 |
gaaattggcaagtgcgtcaaatcgtaacaagtaataaggtagtaagttt |
23224632 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 784 - 838
Target Start/End: Original strand, 11768885 - 11768939
Alignment:
| Q |
784 |
atggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagttt |
838 |
Q |
| |
|
|||||| ||||| ||||||||||||||||||| ||| || |||||||||||||| |
|
|
| T |
11768885 |
atggataaaatttgcaagtgcatcaaatcgtaataaggaataaagtagtaagttt |
11768939 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 784 - 834
Target Start/End: Complemental strand, 30676729 - 30676679
Alignment:
| Q |
784 |
atggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaa |
834 |
Q |
| |
|
||||| ||| ||||||||| || ||||||||||||||||| |||||||||| |
|
|
| T |
30676729 |
atggacgaacttgacaagttcaccaaatcgtaacaagtaataaagtagtaa |
30676679 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 792 - 837
Target Start/End: Original strand, 23420485 - 23420530
Alignment:
| Q |
792 |
aattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagtt |
837 |
Q |
| |
|
||||| |||||| | ||||||||||||||||| ||||||||||||| |
|
|
| T |
23420485 |
aattggcaagtgtaccaaatcgtaacaagtaataaagtagtaagtt |
23420530 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0171 (Bit Score: 46; Significance: 9e-17; HSPs: 2)
Name: scaffold0171
Description:
Target: scaffold0171; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 781 - 838
Target Start/End: Complemental strand, 7422 - 7365
Alignment:
| Q |
781 |
ctgatggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagttt |
838 |
Q |
| |
|
|||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||| |
|
|
| T |
7422 |
ctgatggacgaaattgacaagtgcaccaaatcgtaacaagtaataaagtagtaagttt |
7365 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0171; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 788 - 848
Target Start/End: Complemental strand, 22626 - 22566
Alignment:
| Q |
788 |
atgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagtttttggtcttca |
848 |
Q |
| |
|
||||||||| ||||||||||| || ||||||||||| |||||||||| ||| | ||||||| |
|
|
| T |
22626 |
atgaaattggcaagtgcatcatattgtaacaagtaataaagtagtaaatttattgtcttca |
22566 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 9)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 591 - 697
Target Start/End: Complemental strand, 24671293 - 24671187
Alignment:
| Q |
591 |
gaaaaatacaggaaggaaatagagtttctcctgtaaggtttcatctggtgttagtatttctctatttcaagagagaaggtaacttgtctatgcttttatt |
690 |
Q |
| |
|
|||||||| || |||||||| |||||||||||| ||||||| || ||||||||||| ||||||||||||||| ||||| |||||| | ||| |||| |
|
|
| T |
24671293 |
gaaaaatatagagaggaaatatagtttctcctgtgaggtttctcctagtgttagtattctcctatttcaagagagagggtaatttgtctctccttgtatt |
24671194 |
T |
 |
| Q |
691 |
tagagag |
697 |
Q |
| |
|
||||||| |
|
|
| T |
24671193 |
tagagag |
24671187 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 454 - 554
Target Start/End: Complemental strand, 34489693 - 34489587
Alignment:
| Q |
454 |
ttttgcatgaaagacaagtgtcttgctg----taaggaactattgtttacctctcctataaat--caagtttatttgcaccatttcaatcatcccataaa |
547 |
Q |
| |
|
||||||||| |||||||||| |||| || |||||||| |||||||||||||| ||||||| |||||| |||| |||||||||| ||||||||| || |
|
|
| T |
34489693 |
ttttgcatggaagacaagtggcttgttgcatgtaaggaaccattgtttacctctcttataaatagcaagttcatttccaccatttcattcatcccatcaa |
34489594 |
T |
 |
| Q |
548 |
atagtaa |
554 |
Q |
| |
|
|||||| |
|
|
| T |
34489593 |
gtagtaa |
34489587 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 613 - 735
Target Start/End: Complemental strand, 31205014 - 31204893
Alignment:
| Q |
613 |
agtttctcctgtaaggtttcatctggtgttagtatttctc-tatttc-aagagagaaggtaacttgtctatgcttttatttagagaggttttgtaatttc |
710 |
Q |
| |
|
|||||||||| ||||||||| | |||||||||||| ||| |||||| || ||||| | ||||||||| | ||| ||||||||||||||||||||||| |
|
|
| T |
31205014 |
agtttctcctataaggtttctttcggtgttagtatt-ctcatatttcgaatagaga--gaaacttgtctctccttatatttagagaggttttgtaatttt |
31204918 |
T |
 |
| Q |
711 |
tcccacttaataaaagttatctact |
735 |
Q |
| |
|
||||||||| | |||||| |||||| |
|
|
| T |
31204917 |
tcccacttagtgaaagttctctact |
31204893 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 781 - 848
Target Start/End: Original strand, 25918085 - 25918152
Alignment:
| Q |
781 |
ctgatggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagtttttggtcttca |
848 |
Q |
| |
|
|||||||| ||||||||||||||| ||||| ||||||||||| || ||||||||||| | ||||||| |
|
|
| T |
25918085 |
ctgatggaaaaaattgacaagtgcaccaaattgtaacaagtaataacgtagtaagtttatcgtcttca |
25918152 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 536 - 697
Target Start/End: Original strand, 4579078 - 4579240
Alignment:
| Q |
536 |
tcatcccataaaatagtaatacaacaataagaattagagtttatggaaagtgatcg-aaaaatacaggaaggaaatagagtttctcctgtaaggtttcat |
634 |
Q |
| |
|
||||| ||| || |||||| ||||||| ||||||||||| || | || ||||| | ||||||| || |||||||| |||||||||||| ||||||| |
|
|
| T |
4579078 |
tcatcacatcaagtagtaacacaacaacaagaattagagcttgttgagagtgagaggaaaaatatagagaggaaatatagtttctcctgtgaggtttctc |
4579177 |
T |
 |
| Q |
635 |
ctggtgttagtatttctctatttcaagagagaaggtaacttgtctatgcttttatttagagag |
697 |
Q |
| |
|
| | ||||||||| |||||||| |||||| ||||| |||||| | ||| ||||||||||| |
|
|
| T |
4579178 |
atagagttagtattctcctatttcacgagagagggtaatttgtctctccttgtatttagagag |
4579240 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 489 - 574
Target Start/End: Complemental strand, 34470012 - 34469925
Alignment:
| Q |
489 |
ctattgtttacctctcctataaat--caagtttatttgcaccatttcaatcatcccataaaatagtaatacaacaataagaattagag |
574 |
Q |
| |
|
|||| ||||||||||||||||||| ||||| |||||||| |||||| |||||| || || |||||| ||||||| || |||||||| |
|
|
| T |
34470012 |
ctatggtttacctctcctataaatagaaagttcatttgcacaatttcattcatccgatcaagtagtaacacaacaacaacaattagag |
34469925 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 794 - 837
Target Start/End: Complemental strand, 8839717 - 8839674
Alignment:
| Q |
794 |
ttgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagtt |
837 |
Q |
| |
|
||||||||||||||||| ||||| |||||| ||||||||||||| |
|
|
| T |
8839717 |
ttgacaagtgcatcaaaacgtaataagtaataaagtagtaagtt |
8839674 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 792 - 837
Target Start/End: Complemental strand, 26420042 - 26419997
Alignment:
| Q |
792 |
aattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagtt |
837 |
Q |
| |
|
||||| |||||| ||||||||||||||||||| ||| ||||||||| |
|
|
| T |
26420042 |
aattggcaagtgaatcaaatcgtaacaagtaataaaatagtaagtt |
26419997 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 785 - 834
Target Start/End: Original strand, 33913400 - 33913449
Alignment:
| Q |
785 |
tggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaa |
834 |
Q |
| |
|
|||| ||||||| |||||||| ||||| ||||||||||| |||||||||| |
|
|
| T |
33913400 |
tggacgaaattggcaagtgcaccaaattgtaacaagtaataaagtagtaa |
33913449 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 782 - 834
Target Start/End: Original strand, 13803097 - 13803149
Alignment:
| Q |
782 |
tgatggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaa |
834 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||| ||| |||||| |
|
|
| T |
13803097 |
tgatggacgaaattgacaagtgcatcaaatcgtaacaagtaataaaatagtaa |
13803149 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 782 - 835
Target Start/End: Complemental strand, 12957620 - 12957567
Alignment:
| Q |
782 |
tgatggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaag |
835 |
Q |
| |
|
||||||| |||||||||||||||| |||||||||||||||| ||||||||||| |
|
|
| T |
12957620 |
tgatggacgaaattgacaagtgcactaaatcgtaacaagtaataaagtagtaag |
12957567 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 781 - 837
Target Start/End: Complemental strand, 26853673 - 26853617
Alignment:
| Q |
781 |
ctgatggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagtt |
837 |
Q |
| |
|
|||||||||||||||| || |||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
26853673 |
ctgatggatgaaattggaaaatgcaccaaatcgtaacaagtaataaagtagtaagtt |
26853617 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 782 - 838
Target Start/End: Complemental strand, 32240510 - 32240454
Alignment:
| Q |
782 |
tgatggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagttt |
838 |
Q |
| |
|
||||||| |||||| |||||||| ||||| ||||||||||| |||||||||||||| |
|
|
| T |
32240510 |
tgatggacaaaattggcaagtgcaccaaattgtaacaagtaataaagtagtaagttt |
32240454 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 791 - 846
Target Start/End: Complemental strand, 28075721 - 28075666
Alignment:
| Q |
791 |
aaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagtttttggtctt |
846 |
Q |
| |
|
|||||||||||| || ||||| ||||||||||| ||||||||||||| ||| |||| |
|
|
| T |
28075721 |
aaattgacaagtacaccaaattgtaacaagtaataaagtagtaagttattgttctt |
28075666 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 796 - 837
Target Start/End: Complemental strand, 18790109 - 18790068
Alignment:
| Q |
796 |
gacaagtgcatcaaatcgtaacaagtaacaaagtagtaagtt |
837 |
Q |
| |
|
|||||||||| ||||||||| ||||||| ||||||||||||| |
|
|
| T |
18790109 |
gacaagtgcaccaaatcgtatcaagtaataaagtagtaagtt |
18790068 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 38; Significance: 0.000000000005; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 778 - 838
Target Start/End: Original strand, 41256204 - 41256265
Alignment:
| Q |
778 |
ttcctgatggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagt-agtaagttt |
838 |
Q |
| |
|
||||||||||| |||||||||||||||| ||||||||||||| ||| ||||| ||||||||| |
|
|
| T |
41256204 |
ttcctgatggacgaaattgacaagtgcaccaaatcgtaacaaataataaagtaagtaagttt |
41256265 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 782 - 838
Target Start/End: Complemental strand, 31000668 - 31000612
Alignment:
| Q |
782 |
tgatggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagttt |
838 |
Q |
| |
|
||||||| |||||| |||||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
31000668 |
tgatggacgaaatttgcaagtgcatcaaattgtaacaagtaataaagtagtaagttt |
31000612 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 792 - 837
Target Start/End: Original strand, 17495995 - 17496040
Alignment:
| Q |
792 |
aattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagtt |
837 |
Q |
| |
|
|||||||||||||| ||||||| ||||||||| | ||||||||||| |
|
|
| T |
17495995 |
aattgacaagtgcaccaaatcggaacaagtaatatagtagtaagtt |
17496040 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 793 - 834
Target Start/End: Original strand, 23854055 - 23854096
Alignment:
| Q |
793 |
attgacaagtgcatcaaatcgtaacaagtaacaaagtagtaa |
834 |
Q |
| |
|
||||||||||||| |||||| |||||||||| |||||||||| |
|
|
| T |
23854055 |
attgacaagtgcaccaaatcataacaagtaataaagtagtaa |
23854096 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 782 - 823
Target Start/End: Original strand, 27416083 - 27416124
Alignment:
| Q |
782 |
tgatggatgaaattgacaagtgcatcaaatcgtaacaagtaa |
823 |
Q |
| |
|
||||||| ||||||||||| |||| ||||||||||||||||| |
|
|
| T |
27416083 |
tgatggacgaaattgacaattgcaccaaatcgtaacaagtaa |
27416124 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 737
Target Start/End: Complemental strand, 30397170 - 30397034
Alignment:
| Q |
604 |
aggaaatagagtttctcctgtaaggtttcatctggtgttagtatttctctatttcaagagagaaggtaacttgtctatgcttttatttag--agaggttt |
701 |
Q |
| |
|
|||||||| |||||||||||| || |||| || |||||| |||| ||||||||| | ||| ||||| |||||| | ||| ||| ||| |||||| | |
|
|
| T |
30397170 |
aggaaatatagtttctcctgtgagatttctcctagtgttaatattctcctatttcaacatagagggtaatttgtctctccttgtatatagaaagaggtct |
30397071 |
T |
 |
| Q |
702 |
tgtaatttctcccacttaat-aaaagttatctactct |
737 |
Q |
| |
|
|||||||||| ||||||| | ||||||| |||||||| |
|
|
| T |
30397070 |
tgtaatttcttccacttagtgaaaagttctctactct |
30397034 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 37; Significance: 0.00000000002; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 782 - 838
Target Start/End: Original strand, 11273684 - 11273740
Alignment:
| Q |
782 |
tgatggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagttt |
838 |
Q |
| |
|
||||||| |||||| |||||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
11273684 |
tgatggacaaaattggcaagtgcatcaaattgtaacaagtaataaagtagtaagttt |
11273740 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 782 - 838
Target Start/End: Original strand, 16617447 - 16617503
Alignment:
| Q |
782 |
tgatggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagttt |
838 |
Q |
| |
|
||||||| |||| ||||||||||| ||||||||||| ||||| |||||||||||||| |
|
|
| T |
16617447 |
tgatggacgaaactgacaagtgcaccaaatcgtaactagtaataaagtagtaagttt |
16617503 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 782 - 837
Target Start/End: Complemental strand, 24519014 - 24518959
Alignment:
| Q |
782 |
tgatggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagtt |
837 |
Q |
| |
|
||||||| |||| || |||||| ||||||||||||||||||| ||||||||||||| |
|
|
| T |
24519014 |
tgatggacgaaactggcaagtgtatcaaatcgtaacaagtaataaagtagtaagtt |
24518959 |
T |
 |
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Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 782 - 838
Target Start/End: Complemental strand, 20715899 - 20715843
Alignment:
| Q |
782 |
tgatggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagttt |
838 |
Q |
| |
|
||||||| |||||||||||||||| ||||| |||| |||||| || ||||||||||| |
|
|
| T |
20715899 |
tgatggacgaaattgacaagtgcaccaaattgtaataagtaataaggtagtaagttt |
20715843 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 782 - 836
Target Start/End: Original strand, 16621469 - 16621523
Alignment:
| Q |
782 |
tgatggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagt |
836 |
Q |
| |
|
||||||| |||| ||||||||||| ||||||||||| ||||| ||| |||||||| |
|
|
| T |
16621469 |
tgatggacgaaactgacaagtgcaccaaatcgtaactagtaataaaatagtaagt |
16621523 |
T |
 |
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Target: scaffold0362 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0362
Description:
Target: scaffold0362; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 784 - 834
Target Start/End: Complemental strand, 10021 - 9971
Alignment:
| Q |
784 |
atggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaa |
834 |
Q |
| |
|
||||||||||||| ||| |||| ||||||||||||||||| |||||||||| |
|
|
| T |
10021 |
atggatgaaattggcaaatgcaccaaatcgtaacaagtaataaagtagtaa |
9971 |
T |
 |
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Target: scaffold0386 (Bit Score: 33; Significance: 0.000000005; HSPs: 2)
Name: scaffold0386
Description:
Target: scaffold0386; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 790 - 838
Target Start/End: Original strand, 7539 - 7587
Alignment:
| Q |
790 |
gaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagttt |
838 |
Q |
| |
|
||||| |||||||||| |||||| |||||||||| |||||||||||||| |
|
|
| T |
7539 |
gaaatcgacaagtgcaccaaatcataacaagtaataaagtagtaagttt |
7587 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0386; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 782 - 833
Target Start/End: Original strand, 10553 - 10604
Alignment:
| Q |
782 |
tgatggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagta |
833 |
Q |
| |
|
||||||| |||||||||||||||| |||||| |||||||||| || |||||| |
|
|
| T |
10553 |
tgatggacgaaattgacaagtgcaccaaatcataacaagtaataatgtagta |
10604 |
T |
 |
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Target: scaffold0108 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0108
Description:
Target: scaffold0108; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 781 - 836
Target Start/End: Complemental strand, 9964 - 9909
Alignment:
| Q |
781 |
ctgatggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagt |
836 |
Q |
| |
|
||||||||| |||| |||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
9964 |
ctgatggatagaattcgcaagtgcatcaaattgtaacaagtaataaagtagtaagt |
9909 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0103 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0103
Description:
Target: scaffold0103; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 784 - 838
Target Start/End: Original strand, 36494 - 36548
Alignment:
| Q |
784 |
atggatgaaattgacaagtgcatcaaatcgtaacaagtaacaaagtagtaagttt |
838 |
Q |
| |
|
||||| ||||||| |||||||| |||||| ||||||||| |||||||||||||| |
|
|
| T |
36494 |
atggacgaaattggcaagtgcaccaaatcacaacaagtaataaagtagtaagttt |
36548 |
T |
 |
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