View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6020_high_47 (Length: 238)
Name: NF6020_high_47
Description: NF6020
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6020_high_47 |
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Alignment Details
Target: chr2 (Bit Score: 174; Significance: 9e-94; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 17261258 - 17261038
Alignment:
| Q |
1 |
tgtttttactaaacaaaagacattattaattattttgaaaataaacttttggatactttttaatctccaaaaagaaacacccaaggtctcaagtgtgtat |
100 |
Q |
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| T |
17261258 |
tgtttttactaaacaaaagacattattaattattttgaaaataaacttttggatactttttaatctccaaaaagaaacacccaaggtctcaagtgtatat |
17261159 |
T |
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| Q |
101 |
tattttaaatggagatgttaatagtaatttacgaaattataaatggccaagcatttgacataatcccatgtcaagacaaatcctattgttgtgggtgcta |
200 |
Q |
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| T |
17261158 |
taacttaaatggagatgttgattgtaatttacggaattataaatggccaagcatttgtaat-accccatgtcaagacaaatcccattgttgtgggtgcta |
17261060 |
T |
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| Q |
201 |
tttactagatactcttttttac |
222 |
Q |
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| T |
17261059 |
tttactagatactcttttttac |
17261038 |
T |
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