View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6020_low_15 (Length: 453)

Name: NF6020_low_15
Description: NF6020
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6020_low_15
NF6020_low_15
[»] chr5 (18 HSPs)
chr5 (82-437)||(27578100-27578456)
chr5 (338-430)||(18217800-18217893)
chr5 (338-430)||(21683149-21683242)
chr5 (338-429)||(21754499-21754591)
chr5 (338-429)||(21763786-21763878)
chr5 (338-430)||(18208462-18208555)
chr5 (338-437)||(31917768-31917868)
chr5 (338-428)||(8764373-8764461)
chr5 (338-428)||(33940285-33940373)
chr5 (338-428)||(33950685-33950773)
chr5 (338-428)||(11410117-11410205)
chr5 (338-428)||(18362242-18362330)
chr5 (338-428)||(18391199-18391287)
chr5 (338-428)||(26191031-26191119)
chr5 (338-428)||(26201613-26201701)
chr5 (338-428)||(27413113-27413201)
chr5 (338-428)||(32071404-32071492)
chr5 (391-437)||(42089761-42089807)
[»] chr7 (30 HSPs)
chr7 (338-436)||(14947068-14947167)
chr7 (338-436)||(15374662-15374761)
chr7 (338-430)||(27990057-27990150)
chr7 (338-430)||(43984623-43984716)
chr7 (338-437)||(13130793-13130893)
chr7 (338-421)||(7018413-7018497)
chr7 (338-421)||(7033771-7033855)
chr7 (338-428)||(5380821-5380909)
chr7 (338-428)||(5390459-5390547)
chr7 (338-428)||(8502014-8502102)
chr7 (338-428)||(8512484-8512572)
chr7 (338-428)||(26304520-26304608)
chr7 (338-428)||(26308080-26308168)
chr7 (338-428)||(26362210-26362298)
chr7 (338-428)||(44898263-44898351)
chr7 (338-428)||(44908688-44908776)
chr7 (338-430)||(42622055-42622148)
chr7 (338-428)||(5928100-5928188)
chr7 (338-428)||(6535449-6535537)
chr7 (338-428)||(6545770-6545858)
chr7 (338-428)||(11625373-11625461)
chr7 (338-428)||(16130923-16131011)
chr7 (338-428)||(16141472-16141560)
chr7 (338-428)||(32099345-32099433)
chr7 (338-428)||(32109782-32109870)
chr7 (338-428)||(46498079-46498167)
chr7 (338-428)||(46508691-46508779)
chr7 (342-428)||(9534248-9534335)
chr7 (342-428)||(9544531-9544618)
chr7 (351-387)||(9007952-9007988)
[»] scaffold0068 (1 HSPs)
scaffold0068 (338-430)||(30668-30761)
[»] chr8 (12 HSPs)
chr8 (338-430)||(3988475-3988568)
chr8 (338-430)||(13675723-13675816)
chr8 (338-430)||(16582916-16583009)
chr8 (338-430)||(21986754-21986847)
chr8 (338-430)||(21996288-21996381)
chr8 (338-430)||(12900313-12900406)
chr8 (338-430)||(21462068-21462161)
chr8 (338-428)||(21201842-21201930)
chr8 (338-428)||(21212258-21212346)
chr8 (338-428)||(21335263-21335351)
chr8 (338-428)||(9324043-9324131)
chr8 (338-428)||(18524495-18524583)
[»] chr4 (28 HSPs)
chr4 (338-430)||(5291916-5292009)
chr4 (338-430)||(5301575-5301668)
chr4 (338-430)||(16250409-16250502)
chr4 (338-430)||(21847249-21847342)
chr4 (338-430)||(21903112-21903205)
chr4 (338-430)||(27679581-27679674)
chr4 (338-430)||(27689236-27689329)
chr4 (338-430)||(21856841-21856934)
chr4 (338-430)||(21912704-21912797)
chr4 (338-437)||(16254191-16254291)
chr4 (338-438)||(10422738-10422839)
chr4 (338-437)||(7845745-7845845)
chr4 (338-439)||(3486455-3486557)
chr4 (338-439)||(3495778-3495880)
chr4 (338-437)||(7842865-7842965)
chr4 (338-437)||(15671036-15671136)
chr4 (338-428)||(6693183-6693271)
chr4 (338-428)||(6703589-6703677)
chr4 (338-428)||(16081288-16081376)
chr4 (338-428)||(40922808-40922896)
chr4 (338-428)||(17983880-17983968)
chr4 (338-428)||(18104430-18104518)
chr4 (338-428)||(17144696-17144787)
chr4 (351-420)||(41527271-41527341)
chr4 (338-367)||(3475094-3475123)
chr4 (338-387)||(6404833-6404882)
chr4 (338-387)||(13792040-13792089)
chr4 (338-387)||(30652674-30652723)
[»] chr3 (19 HSPs)
chr3 (338-430)||(4372503-4372596)
chr3 (338-430)||(4382244-4382337)
chr3 (342-437)||(11000-11096)
chr3 (354-439)||(4023152-4023238)
chr3 (339-437)||(20492979-20493078)
chr3 (338-428)||(682821-682909)
chr3 (338-428)||(1684263-1684351)
chr3 (338-428)||(5654638-5654726)
chr3 (338-428)||(8973811-8973899)
chr3 (338-428)||(8984366-8984454)
chr3 (338-428)||(12794453-12794541)
chr3 (338-428)||(16334428-16334516)
chr3 (338-428)||(16697818-16697906)
chr3 (338-428)||(6423272-6423360)
chr3 (338-424)||(9538104-9538188)
chr3 (338-424)||(9548430-9548514)
chr3 (338-428)||(10002434-10002525)
chr3 (338-439)||(25434064-25434165)
chr3 (338-428)||(6433699-6433787)
[»] chr2 (17 HSPs)
chr2 (338-430)||(4459341-4459434)
chr2 (338-430)||(4468966-4469059)
chr2 (338-430)||(5335785-5335878)
chr2 (338-430)||(5345637-5345730)
chr2 (338-430)||(32935710-32935803)
chr2 (336-428)||(38929429-38929522)
chr2 (338-428)||(29424319-29424410)
chr2 (338-430)||(24695508-24695601)
chr2 (338-428)||(9501686-9501774)
chr2 (338-428)||(9513052-9513140)
chr2 (338-428)||(18652183-18652271)
chr2 (338-428)||(18664301-18664389)
chr2 (342-428)||(38956777-38956864)
chr2 (338-428)||(29115280-29115368)
chr2 (338-439)||(37862038-37862140)
chr2 (338-428)||(17489654-17489742)
chr2 (342-428)||(2997627-2997711)
[»] scaffold0706 (1 HSPs)
scaffold0706 (338-437)||(969-1069)
[»] chr1 (13 HSPs)
chr1 (338-437)||(21904333-21904433)
chr1 (338-437)||(8541155-8541255)
chr1 (338-437)||(8606394-8606494)
chr1 (338-437)||(18384300-18384400)
chr1 (342-430)||(2117817-2117906)
chr1 (338-441)||(2369427-2369531)
chr1 (347-437)||(37013309-37013400)
chr1 (338-428)||(42035181-42035272)
chr1 (354-439)||(13966000-13966086)
chr1 (342-426)||(30548634-30548718)
chr1 (338-428)||(16155848-16155936)
chr1 (338-428)||(21459593-21459681)
chr1 (338-428)||(25020433-25020521)
[»] scaffold0873 (1 HSPs)
scaffold0873 (338-430)||(4809-4902)
[»] scaffold0611 (1 HSPs)
scaffold0611 (338-437)||(9067-9167)
[»] scaffold0591 (1 HSPs)
scaffold0591 (338-429)||(178-270)
[»] chr6 (16 HSPs)
chr6 (342-437)||(20968798-20968894)
chr6 (338-437)||(18202503-18202603)
chr6 (338-428)||(12456018-12456106)
chr6 (338-428)||(3286811-3286899)
chr6 (338-428)||(16898911-16898999)
chr6 (338-428)||(16909564-16909652)
chr6 (338-428)||(18170838-18170926)
chr6 (338-428)||(20913247-20913335)
chr6 (338-428)||(24930042-24930130)
chr6 (338-428)||(26439794-26439882)
chr6 (338-428)||(31358526-31358614)
chr6 (338-428)||(31368256-31368344)
chr6 (338-428)||(14792567-14792655)
chr6 (338-428)||(18161026-18161114)
chr6 (338-428)||(24921006-24921094)
chr6 (338-439)||(29541400-29541502)
[»] scaffold0172 (1 HSPs)
scaffold0172 (338-430)||(322-415)
[»] scaffold0168 (1 HSPs)
scaffold0168 (342-430)||(6440-6529)
[»] scaffold0043 (1 HSPs)
scaffold0043 (338-435)||(91890-91988)
[»] scaffold0106 (1 HSPs)
scaffold0106 (338-437)||(18-118)
[»] scaffold0047 (1 HSPs)
scaffold0047 (342-430)||(73742-73831)
[»] scaffold0014 (2 HSPs)
scaffold0014 (338-439)||(147661-147763)
scaffold0014 (338-428)||(233004-233092)
[»] scaffold0277 (1 HSPs)
scaffold0277 (338-428)||(18378-18466)
[»] scaffold0005 (1 HSPs)
scaffold0005 (338-428)||(309035-309123)
[»] scaffold0343 (1 HSPs)
scaffold0343 (338-428)||(14945-15033)
[»] scaffold0254 (1 HSPs)
scaffold0254 (352-428)||(6872-6946)


Alignment Details
Target: chr5 (Bit Score: 260; Significance: 1e-145; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 82 - 437
Target Start/End: Original strand, 27578100 - 27578456
Alignment:
Q  82 tatcgaccatcaattaaccactataagctagattattagccattcannnnnnnnnaaatctccaagtttgaa--ggaacaaaaactcttaaaatcccaaa 179  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||         |||||||||||||||||  ||||||||||||||||||||||||||    
T  27578100 tatcgaccatcaactaaccactataagctagactattagccattcattttttta-aaatctccaagtttgaataggaacaaaaactcttaaaatcccaaa 27578198  T
Q  180 gtttaaatctatttgaatttttggacatttgactggtgactggtgagtggtttgttgaagaagcctttcacgcggcaattaatgttcataaacataatta 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  27578199 gtttaaatctatttgaatttttggacatttgactggtgactggtgagtggtttgttgaagaagcctttcacgtagcaattaatgttcataaacataatta 27578298  T
Q  280 agctaggaaaagaaataatgtgtggtgacttctctgtagtggccattattagaagcttaaaattatcctgaaacttaaaagtgattctcaagtagtttac 379  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  27578299 agctaggaaaagaaataatgtgtggtgacttctctgtagtgg-cattattagaagcttaaaattatcctgaaacttaaaagtgattctcaagtagtttat 27578397  T
Q  380 ttggaataatt-agttaatattctgatttcataacgttctgaagttcatacataaaaac 437  Q
    || ||||| || |||||||||||||| |||| |||||||||||||||||||| ||||||    
T  27578398 ttagaatagttaagttaatattctgacttcagaacgttctgaagttcatacacaaaaac 27578456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 430
Target Start/End: Original strand, 18217800 - 18217893
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcataca 430  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||| ||||||||||||||||||||    
T  18217800 aaaattaacctgaaacttaaaagtgattctcaagtagtttacttggaatagttaagttaatattctgacttcagaacgttctgaagttcataca 18217893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 430
Target Start/End: Complemental strand, 21683242 - 21683149
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcataca 430  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||| ||||||||||||||||||||    
T  21683242 aaaattaacctgaaacttaaaagtgattctcaagtagtttacttggaatagttaagttaatattctgacttcagaacgttctgaagttcataca 21683149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 338 - 429
Target Start/End: Complemental strand, 21754591 - 21754499
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcatac 429  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||| |||||||||||||||||||    
T  21754591 aaaattaacctgaaacttaaaagtgattctcaagtagtttacttggaatagttaagttaatattctgacttcagaacgttctgaagttcatac 21754499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 338 - 429
Target Start/End: Complemental strand, 21763878 - 21763786
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcatac 429  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||| |||||||||||||||||||    
T  21763878 aaaattaacctgaaacttaaaagtgattctcaagtagtttacttggaatagttaagttaatattctgacttcagaacgttctgaagttcatac 21763786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 338 - 430
Target Start/End: Original strand, 18208462 - 18208555
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcataca 430  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||| |||| ||||||||||||||||||||    
T  18208462 aaaattaacctgaaacttaaaagtgattcttaagtagtttacttggaatagttaagttaatattctgacttcagaacgttctgaagttcataca 18208555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 338 - 437
Target Start/End: Complemental strand, 31917868 - 31917768
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcatacataaaaa 436  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||||  |||||| |||| |||||||||||||||||||| |||||    
T  31917868 aaaattatcctgaaacttaaaggtgattctcaagtagtttacttggaatagttaagttaactttctgacttcagaacgttctgaagttcatacacaaaaa 31917769  T
Q  437 c 437  Q
    |    
T  31917768 c 31917768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 428
Target Start/End: Original strand, 8764373 - 8764461
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  8764373 aaaattatcctgaaacttaaaagtgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 8764461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 33940373 - 33940285
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  33940373 aaaattatcctgaaacttaaaagtgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 33940285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 33950773 - 33950685
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  33950773 aaaattatcctgaaacttaaaagtgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 33950685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Original strand, 11410117 - 11410205
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  11410117 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 11410205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 18362330 - 18362242
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  18362330 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 18362242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 18391287 - 18391199
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  18391287 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 18391199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Original strand, 26191031 - 26191119
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  26191031 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 26191119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Original strand, 26201613 - 26201701
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  26201613 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 26201701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 27413201 - 27413113
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  27413201 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 27413113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 32071492 - 32071404
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| |||||||| |||| ||  |||||  |||||| |||| || |||||||||||||||    
T  32071492 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttagaattat--gttaactttctgacttcagaatgttctgaagttcata 32071404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 391 - 437
Target Start/End: Original strand, 42089761 - 42089807
Alignment:
Q  391 agttaatattctgatttcataacgttctgaagttcatacataaaaac 437  Q
    |||||||||||||| |||| |||||||||||||||||||| ||||||    
T  42089761 agttaatattctgacttcagaacgttctgaagttcatacacaaaaac 42089807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 6e-35; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 338 - 436
Target Start/End: Complemental strand, 14947167 - 14947068
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcatacataaaaa 436  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||| |||||||||||||||||||| |||||    
T  14947167 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaatagttaagttaatattctgacttcagaacgttctgaagttcatacacaaaaa 14947068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 338 - 436
Target Start/End: Complemental strand, 15374761 - 15374662
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcatacataaaaa 436  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||| |||||||||||||||||||| |||||    
T  15374761 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaatagttaagttaatattctgacttcagaacgttctgaagttcatacacaaaaa 15374662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 430
Target Start/End: Complemental strand, 27990150 - 27990057
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcataca 430  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||| ||||||||||||||||||||    
T  27990150 aaaattaacctgaaacttaaaagtgattctcaagtagtttacttggaatagttaagttaatattctgacttcagaacgttctgaagttcataca 27990057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 430
Target Start/End: Complemental strand, 43984716 - 43984623
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcataca 430  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||| ||||||||||||||||||||    
T  43984716 aaaattaacctgaaacttaaaagtgattctcaagtagtttacttggaatagttaagttaatattctgacttcagaacgttctgaagttcataca 43984623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 338 - 437
Target Start/End: Complemental strand, 13130893 - 13130793
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcatacataaaaa 436  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||  |||||| |||| |||||||||||||||||||| |||||    
T  13130893 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaatagttaagttaactttctgacttcagaacgttctgaagttcatacacaaaaa 13130794  T
Q  437 c 437  Q
    |    
T  13130793 c 13130793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 338 - 421
Target Start/End: Original strand, 7018413 - 7018497
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaa 421  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||| |||| | |||||||||    
T  7018413 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaatagttaaggtaatattctgacttcagagcgttctgaa 7018497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 338 - 421
Target Start/End: Original strand, 7033771 - 7033855
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaa 421  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||| |||| | |||||||||    
T  7033771 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaatagttaaggtaatattctgacttcagagcgttctgaa 7033855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 428
Target Start/End: Original strand, 5380821 - 5380909
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  5380821 aaaattatcctgaaacttaaaagtgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 5380909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 428
Target Start/End: Original strand, 5390459 - 5390547
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  5390459 aaaattatcctgaaacttaaaagtgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 5390547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 8502102 - 8502014
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  8502102 aaaattatcctgaaacttaaaagtgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 8502014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 8512572 - 8512484
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  8512572 aaaattatcctgaaacttaaaagtgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 8512484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 26304608 - 26304520
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  26304608 aaaattatcctgaaacttaaaaatgattctcaagtagtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 26304520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 26308168 - 26308080
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  26308168 aaaattatcctgaaacttaaaaatgattctcaagtagtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 26308080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 428
Target Start/End: Original strand, 26362210 - 26362298
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  26362210 aaaattatcctgaaacttaaaaatgattctcaagtagtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 26362298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 44898351 - 44898263
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  44898351 aaaattatcctgaaacttaaaagtgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 44898263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 44908776 - 44908688
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  44908776 aaaattatcctgaaacttaaaagtgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 44908688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 338 - 430
Target Start/End: Complemental strand, 42622148 - 42622055
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcataca 430  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||| || ||||||  |||||| |||| || |||||||||||| ||||    
T  42622148 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttttaatagttaagttaactttctgacttcagaatgttctgaagttcttaca 42622055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 5928188 - 5928100
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  5928188 aaaattatcctaaaacttaaaagtgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 5928100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 6535537 - 6535449
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  6535537 aaaattgtcctgaaacttaaaagtgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 6535449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 6545858 - 6545770
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  6545858 aaaattgtcctgaaacttaaaagtgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 6545770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Original strand, 11625373 - 11625461
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  11625373 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 11625461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Original strand, 16130923 - 16131011
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  16130923 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 16131011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Original strand, 16141472 - 16141560
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  16141472 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 16141560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 32099433 - 32099345
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  32099433 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 32099345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 32109870 - 32109782
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  32109870 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 32109782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 46498167 - 46498079
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  46498167 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 46498079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 46508779 - 46508691
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  46508779 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 46508691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 342 - 428
Target Start/End: Original strand, 9534248 - 9534335
Alignment:
Q  342 ttatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||| |||||||||||  || ||||||||||| || ||||||  |||||| |||| ||||||||||||||||||    
T  9534248 ttatcctgaaacttaaaaatgattctcaagctgtctacttggaatagttaagttaactttctgacttcagaacgttctgaagttcata 9534335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 342 - 428
Target Start/End: Original strand, 9544531 - 9544618
Alignment:
Q  342 ttatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||| |||||||||||  || ||||||||||| || ||||||  |||||| |||| ||||||||||||||||||    
T  9544531 ttatcctgaaacttaaaaatgattctcaagctgtctacttggaatagttaagttaactttctgacttcagaacgttctgaagttcata 9544618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 387
Target Start/End: Complemental strand, 9007988 - 9007952
Alignment:
Q  351 aacttaaaagtgattctcaagtagtttacttggaata 387  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  9007988 aacttaaaaatgattctcaagttgtttacttggaata 9007952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 430
Target Start/End: Original strand, 30668 - 30761
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcataca 430  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||| ||||||||||||||||||||    
T  30668 aaaattaacctgaaacttaaaagtgattctcaagtagtttacttggaatagttaagttaatattctgacttcagaacgttctgaagttcataca 30761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 2e-31; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 430
Target Start/End: Complemental strand, 3988568 - 3988475
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcataca 430  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||| ||||||||||||||||||||    
T  3988568 aaaattaacctgaaacttaaaagtgattctcaagtagtttacttggaatagttaagttaatattctgacttcagaacgttctgaagttcataca 3988475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 430
Target Start/End: Complemental strand, 13675816 - 13675723
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcataca 430  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||| ||||||||||||||||||||    
T  13675816 aaaattaacctgaaacttaaaagtgattctcaagtagtttacttggaatagttaagttaatattctgacttcagaacgttctgaagttcataca 13675723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 430
Target Start/End: Complemental strand, 16583009 - 16582916
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcataca 430  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||| ||||||||||||||||||||    
T  16583009 aaaattaacctgaaacttaaaagtgattctcaagtagtttacttggaatagttaagttaatattctgacttcagaacgttctgaagttcataca 16582916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 430
Target Start/End: Original strand, 21986754 - 21986847
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcataca 430  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||| ||||||||||||||||||||    
T  21986754 aaaattaacctgaaacttaaaagtgattctcaagtagtttacttggaatagttaagttaatattctgacttcagaacgttctgaagttcataca 21986847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 430
Target Start/End: Original strand, 21996288 - 21996381
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcataca 430  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||| ||||||||||||||||||||    
T  21996288 aaaattaacctgaaacttaaaagtgattctcaagtagtttacttggaatagttaagttaatattctgacttcagaacgttctgaagttcataca 21996381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 338 - 430
Target Start/End: Original strand, 12900313 - 12900406
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcataca 430  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||| |||| ||||||||||||||||||||    
T  12900313 aaaattaacctgaaacttaaaagtgattctaaagtagtttacttggaatagttaagttaatattctgacttcagaacgttctgaagttcataca 12900406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 338 - 430
Target Start/End: Complemental strand, 21462161 - 21462068
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcataca 430  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||  |||||| |||| ||||||||||||||||||||    
T  21462161 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaatagttaagttaactttctgacttcagaacgttctgaagttcataca 21462068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 428
Target Start/End: Original strand, 21201842 - 21201930
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  21201842 aaaattatcctgaaacttaaaagtgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 21201930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 428
Target Start/End: Original strand, 21212258 - 21212346
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  21212258 aaaattatcctgaaacttaaaagtgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 21212346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 21335351 - 21335263
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  21335351 aaaattatcctgaaacttaaaagtgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 21335263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Original strand, 9324043 - 9324131
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  9324043 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 9324131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 18524583 - 18524495
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| | || || |||||||||||||||    
T  18524583 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgactccagaatgttctgaagttcata 18524495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 2e-31; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 430
Target Start/End: Original strand, 5291916 - 5292009
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcataca 430  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||| ||||||||||||||||||||    
T  5291916 aaaattaacctgaaacttaaaagtgattctcaagtagtttacttggaatagttaagttaatattctgacttcagaacgttctgaagttcataca 5292009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 430
Target Start/End: Original strand, 5301575 - 5301668
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcataca 430  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||| ||||||||||||||||||||    
T  5301575 aaaattaacctgaaacttaaaagtgattctcaagtagtttacttggaatagttaagttaatattctgacttcagaacgttctgaagttcataca 5301668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 430
Target Start/End: Complemental strand, 16250502 - 16250409
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcataca 430  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||| ||||||||||||||||||||    
T  16250502 aaaattaacctgaaacttaaaagtgattctcaagtagtttacttggaatagttaagttaatattctgacttcagaacgttctgaagttcataca 16250409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 430
Target Start/End: Complemental strand, 21847342 - 21847249
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcataca 430  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||| ||||||||||||||||||||    
T  21847342 aaaattaacctgaaacttaaaagtgattctcaagtagtttacttggaatagttaagttaatattctgacttcagaacgttctgaagttcataca 21847249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 430
Target Start/End: Complemental strand, 21903205 - 21903112
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcataca 430  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||| ||||||||||||||||||||    
T  21903205 aaaattaacctgaaacttaaaagtgattctcaagtagtttacttggaatagttaagttaatattctgacttcagaacgttctgaagttcataca 21903112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 430
Target Start/End: Original strand, 27679581 - 27679674
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcataca 430  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||| ||||||||||||||||||||    
T  27679581 aaaattaacctgaaacttaaaagtgattctcaagtagtttacttggaatagttaagttaatattctgacttcagaacgttctgaagttcataca 27679674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 430
Target Start/End: Original strand, 27689236 - 27689329
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcataca 430  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||| ||||||||||||||||||||    
T  27689236 aaaattaacctgaaacttaaaagtgattctcaagtagtttacttggaatagttaagttaatattctgacttcagaacgttctgaagttcataca 27689329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 338 - 430
Target Start/End: Complemental strand, 21856934 - 21856841
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcataca 430  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||| |||| ||||||||||||||||||||    
T  21856934 aaaattaacctgaaacttaaaagtgattctcaagttgtttacttggaatagttaagttaatattctgacttcagaacgttctgaagttcataca 21856841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 338 - 430
Target Start/End: Complemental strand, 21912797 - 21912704
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcataca 430  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||| |||| ||||||||||||||||||||    
T  21912797 aaaattaacctgaaacttaaaagtgattctcaagttgtttacttggaatagttaagttaatattctgacttcagaacgttctgaagttcataca 21912704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 338 - 437
Target Start/End: Complemental strand, 16254291 - 16254191
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcatacataaaaa 436  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||  |||||| |||| |||||||||||||||||||| |||||    
T  16254291 aaaattatcctgaaacttaaaagtgattctcaagtggtttacttggaatagttaagttaactttctgacttcaaaacgttctgaagttcatacacaaaaa 16254192  T
Q  437 c 437  Q
    |    
T  16254191 c 16254191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 338 - 438
Target Start/End: Complemental strand, 10422839 - 10422738
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcatacataaaaa 436  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||  |||||| |||| |||||||||||||||||| | |||||    
T  10422839 aaaattatcctgaaacttaaaagtaattctcaagttgtttacttggaataattaagttaactttctgacttcagaacgttctgaagttcataaacaaaaa 10422740  T
Q  437 ct 438  Q
    ||    
T  10422739 ct 10422738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 338 - 437
Target Start/End: Original strand, 7845745 - 7845845
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcatacataaaaa 436  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| || ||||||  |||||| ||||||||||||||||||||||| | |||||    
T  7845745 aaaattatcctgaaacttaaaagtgattttcaagttgtttacttggaatagttaagttaactttctgacttcataacgttctgaagttcataaacaaaaa 7845844  T
Q  437 c 437  Q
    |    
T  7845845 c 7845845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 338 - 439
Target Start/End: Original strand, 3486455 - 3486557
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcatacataaaaa 436  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |||| || ||||||  |||||| |||| |||||||||||||||||| | |||||    
T  3486455 aaaattatcctgaaacttaaaagtgattctcaagttgtttacttgaaatagttaagttaactttctgacttcagaacgttctgaagttcataaacaaaaa 3486554  T
Q  437 ctg 439  Q
    |||    
T  3486555 ctg 3486557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 338 - 439
Target Start/End: Original strand, 3495778 - 3495880
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcatacataaaaa 436  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |||| || ||||||  |||||| |||| |||||||||||||||||| | |||||    
T  3495778 aaaattatcctgaaacttaaaagtgattctcaagttgtttacttgaaatagttaagttaactttctgacttcagaacgttctgaagttcataaacaaaaa 3495877  T
Q  437 ctg 439  Q
    |||    
T  3495878 ctg 3495880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 338 - 437
Target Start/End: Original strand, 7842865 - 7842965
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcatacataaaaa 436  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| || | ||||  |||||| |||| |||||||||||||||||| | |||||    
T  7842865 aaaattatcctgaaacttaaaagtgattctcaagttgtttacttggaatagttaatttaactttctgacttcagaacgttctgaagttcataaacaaaaa 7842964  T
Q  437 c 437  Q
    |    
T  7842965 c 7842965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 338 - 437
Target Start/End: Complemental strand, 15671136 - 15671036
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcatacataaaaa 436  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||  |||||| |||| |||||| || |||||||| | |||||    
T  15671136 aaaattatcctgaaacttaaaagtgattctcaagttgtttacttggaataattaagttaactttctgacttcagaacgttatgtagttcataaacaaaaa 15671037  T
Q  437 c 437  Q
    |    
T  15671036 c 15671036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 6693271 - 6693183
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  6693271 aaaattatcctgaaacttaaaagtgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 6693183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 6703677 - 6703589
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  6703677 aaaattatcctgaaacttaaaagtgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 6703589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 428
Target Start/End: Original strand, 16081288 - 16081376
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  16081288 aaaattatcctgaaacttaaaagtgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 16081376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 40922896 - 40922808
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  40922896 aaaattatcctgaaacttaaaagtgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 40922808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Original strand, 17983880 - 17983968
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  17983880 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 17983968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Original strand, 18104430 - 18104518
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  18104430 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 18104518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 17144787 - 17144696
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcata 428  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||| |||| || ||||||  || ||| |||| ||| ||||||||||||||    
T  17144787 aaaattatcctgaaacttaaaagtgattctcaagttgtttaattgaaatagttaagttaactttttgacttcagaacattctgaagttcata 17144696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 420
Target Start/End: Complemental strand, 41527341 - 41527271
Alignment:
Q  351 aacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctga 420  Q
    ||||||||| |||||||||||| |||||||||||||| || ||||| |||||| | |||| ||||||||||    
T  41527341 aacttaaaattgattctcaagttgtttacttggaatagttaagttagtattctaacttcagaacgttctga 41527271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 367
Target Start/End: Original strand, 3475094 - 3475123
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattct 367  Q
    ||||||||||||||||||||||||||||||    
T  3475094 aaaattatcctgaaacttaaaagtgattct 3475123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 387
Target Start/End: Original strand, 6404833 - 6404882
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaata 387  Q
    ||||||| | || ||||||||| |||||||||||| ||||||||||||||    
T  6404833 aaaattaacttgtaacttaaaaatgattctcaagttgtttacttggaata 6404882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 387
Target Start/End: Original strand, 13792040 - 13792089
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaata 387  Q
    ||||||| |||| ||||||||| | |||||||||| ||||||||||||||    
T  13792040 aaaattaacctgtaacttaaaattaattctcaagttgtttacttggaata 13792089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 387
Target Start/End: Complemental strand, 30652723 - 30652674
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaata 387  Q
    ||||||| |||| ||||||||| | |||||||||| ||||||||||||||    
T  30652723 aaaattaacctgtaacttaaaattaattctcaagttgtttacttggaata 30652674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 2e-31; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 430
Target Start/End: Complemental strand, 4372596 - 4372503
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcataca 430  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||| ||||||||||||||||||||    
T  4372596 aaaattaacctgaaacttaaaagtgattctcaagtagtttacttggaatagttaagttaatattctgacttcagaacgttctgaagttcataca 4372503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 430
Target Start/End: Complemental strand, 4382337 - 4382244
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcataca 430  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||| ||||||||||||||||||||    
T  4382337 aaaattaacctgaaacttaaaagtgattctcaagtagtttacttggaatagttaagttaatattctgacttcagaacgttctgaagttcataca 4382244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 342 - 437
Target Start/End: Original strand, 11000 - 11096
Alignment:
Q  342 ttatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcatacataaaaac 437  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||  |||||| |||| |||||||||||||||||||| ||||||    
T  11000 ttatcctgaaacttaaaagtgattctcaagtagtttacttggaatagttaagttaactttctgacttcagaacgttctgaagttcatacacaaaaac 11096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 354 - 439
Target Start/End: Original strand, 4023152 - 4023238
Alignment:
Q  354 ttaaaagtgattctcaagtagtttacttggaataatta-gttaatattctgatttcataacgttctgaagttcatacataaaaactg 439  Q
    |||||||| ||||||||||||||||||||||||| ||| ||||||||||||| |||| |||||| ||||||||||||| ||||||||    
T  4023152 ttaaaagtaattctcaagtagtttacttggaatagttaagttaatattctgacttcagaacgttatgaagttcatacacaaaaactg 4023238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 339 - 437
Target Start/End: Complemental strand, 20493078 - 20492979
Alignment:
Q  339 aaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcatacataaaaac 437  Q
    ||||||| |||||||||||||||||||||||||  || ||||||||||| || |||||||||||||| |||| || ||||| ||||||||||| ||||||    
T  20493078 aaattatactgaaacttaaaagtgattctcaagatgtctacttggaatagttaagttaatattctgacttcagaatgttctaaagttcatacacaaaaac 20492979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Original strand, 682821 - 682909
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  682821 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 682909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Original strand, 1684263 - 1684351
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  1684263 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 1684351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Original strand, 5654638 - 5654726
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  5654638 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 5654726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 8973899 - 8973811
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  8973899 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 8973811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 8984454 - 8984366
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  8984454 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 8984366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Original strand, 12794453 - 12794541
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  12794453 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 12794541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Original strand, 16334428 - 16334516
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  16334428 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 16334516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Original strand, 16697818 - 16697906
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  16697818 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 16697906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 6423360 - 6423272
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||| ||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  6423360 aaaattattctgaaacttaaaattgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 6423272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 338 - 424
Target Start/End: Complemental strand, 9538188 - 9538104
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagtt 424  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||    
T  9538188 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagtt 9538104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 338 - 424
Target Start/End: Complemental strand, 9548514 - 9548430
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagtt 424  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||    
T  9548514 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagtt 9548430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 338 - 428
Target Start/End: Original strand, 10002434 - 10002525
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||  || | ||||||||| || ||||||  |||||| |||| ||||||||||||||||||    
T  10002434 aaaattatcctgaaacttaaaaatgattctcaagctgtctgcttggaatagttaagttaactttctgacttcagaacgttctgaagttcata 10002525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 338 - 439
Target Start/End: Complemental strand, 25434165 - 25434064
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcatacataaaaa 436  Q
    ||||||||||||||||| ||| ||||||||||||| |||||||||||||| || ||||||  |||||  |||| ||| |||||||||||||| | |||||    
T  25434165 aaaattatcctgaaactcaaa-gtgattctcaagttgtttacttggaatagttaagttaactttctgtcttcagaacattctgaagttcataaacaaaaa 25434067  T
Q  437 ctg 439  Q
    |||    
T  25434066 ctg 25434064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 6433787 - 6433699
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||| ||||||||||||| |||||||||||| ||||||||| ||| ||  |||||  |||||| |||| || ||| |||||||||||    
T  6433787 aaaattattctgaaacttaaaattgattctcaagttgtttacttgaaattat--gttaactttctgacttcaaaatgttatgaagttcata 6433699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 2e-31; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 430
Target Start/End: Complemental strand, 4459434 - 4459341
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcataca 430  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||| ||||||||||||||||||||    
T  4459434 aaaattaacctgaaacttaaaagtgattctcaagtagtttacttggaatagttaagttaatattctgacttcagaacgttctgaagttcataca 4459341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 430
Target Start/End: Complemental strand, 4469059 - 4468966
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcataca 430  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||| ||||||||||||||||||||    
T  4469059 aaaattaacctgaaacttaaaagtgattctcaagtagtttacttggaatagttaagttaatattctgacttcagaacgttctgaagttcataca 4468966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 430
Target Start/End: Original strand, 5335785 - 5335878
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcataca 430  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||| ||||||||||||||||||||    
T  5335785 aaaattaacctgaaacttaaaagtgattctcaagtagtttacttggaatagttaagttaatattctgacttcagaacgttctgaagttcataca 5335878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 430
Target Start/End: Original strand, 5345637 - 5345730
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcataca 430  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||| ||||||||||||||||||||    
T  5345637 aaaattaacctgaaacttaaaagtgattctcaagtagtttacttggaatagttaagttaatattctgacttcagaacgttctgaagttcataca 5345730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 338 - 430
Target Start/End: Original strand, 32935710 - 32935803
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcataca 430  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||| |||| ||||||||||||||||||||    
T  32935710 aaaattaacctgaaacttaaaagtgattctcaagttgtttacttggaatagttaagttaatattctgacttcagaacgttctgaagttcataca 32935803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 336 - 428
Target Start/End: Original strand, 38929429 - 38929522
Alignment:
Q  336 ttaaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcata 428  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| |||| || ||||||  |||||| |||| ||||||||||||||||||    
T  38929429 ttaaaattatcctgaaacttaaaagtgattctcaagttgtttacttgaaatagttaagttaactttctgacttcagaacgttctgaagttcata 38929522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 29424410 - 29424319
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||| || ||||||  |||||| |||| ||||||||||||||||||    
T  29424410 aaaattatcctgaaacttaaaagtaattctcaagttgtttacttggaatagttaagttaactttctgacttcagaacgttctgaagttcata 29424319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 338 - 430
Target Start/End: Original strand, 24695508 - 24695601
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcataca 430  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||  |||| | |||| ||| ||||||||||||||||    
T  24695508 aaaattattctgaaacttaaaagtgattctcaagtagtttacttggaatagttaagttaactttctaacttcagaacattctgaagttcataca 24695601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 428
Target Start/End: Original strand, 9501686 - 9501774
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  9501686 aaaattatcctgaaacttaaaagtgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 9501774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 428
Target Start/End: Original strand, 9513052 - 9513140
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  9513052 aaaattatcctgaaacttaaaagtgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 9513140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 18652271 - 18652183
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  18652271 aaaattatcctgaaacttaaaagtgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 18652183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 18664389 - 18664301
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  18664389 aaaattatcctgaaacttaaaagtgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 18664301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 342 - 428
Target Start/End: Original strand, 38956777 - 38956864
Alignment:
Q  342 ttatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcata 428  Q
    ||||||||||||||||||||||||||||||| |||||||||||||  || ||||||  |||||| |||| ||||||||||||||||||    
T  38956777 ttatcctgaaacttaaaagtgattctcaagttgtttacttggaattgttaagttaactttctgacttcagaacgttctgaagttcata 38956864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Original strand, 29115280 - 29115368
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  29115280 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 29115368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 338 - 439
Target Start/End: Original strand, 37862038 - 37862140
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcatacataaaaa 436  Q
    ||||||||||||||||||||| || |||||||||| ||||||||| |||| || ||||||  |||||| |||| |||||||||||||| ||| | |||||    
T  37862038 aaaattatcctgaaacttaaatgtaattctcaagttgtttacttgaaatagttgagttaactttctgacttcagaacgttctgaagtttataaacaaaaa 37862137  T
Q  437 ctg 439  Q
    |||    
T  37862138 ctg 37862140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 17489742 - 17489654
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    ||||| |||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  17489742 aaaataatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 17489654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 428
Target Start/End: Original strand, 2997627 - 2997711
Alignment:
Q  342 ttatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||| |||||||||||| |||||||| |||| ||  |||||  |||||| |||| || |||||||||||||||    
T  2997627 ttatcctgaaacttaaaattgattctcaagttgtttactttgaattat--gttaactttctgacttcagaatgttctgaagttcata 2997711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 338 - 437
Target Start/End: Original strand, 969 - 1069
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcatacataaaaa 436  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||| | |||| |||||||||||||||||||| |||||    
T  969 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaatagttaagttaacattctaacttcagaacgttctgaagttcatacacaaaaa 1068  T
Q  437 c 437  Q
    |    
T  1069 c 1069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 8e-31; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 338 - 437
Target Start/End: Original strand, 21904333 - 21904433
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcatacataaaaa 436  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||  |||||| |||| |||||||||||||||||||| |||||    
T  21904333 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaatagttaagttaactttctgacttcagaacgttctgaagttcatacacaaaaa 21904432  T
Q  437 c 437  Q
    |    
T  21904433 c 21904433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 338 - 437
Target Start/End: Complemental strand, 8541255 - 8541155
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcatacataaaaa 436  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||  || |||||||||||||| |||| || ||||||||||||||||| |||||    
T  8541255 aaaattatcatgaaacttaaaagtgattctcaagtagtttacttggaattgttaagttaatattctgacttcagaatgttctgaagttcatacacaaaaa 8541156  T
Q  437 c 437  Q
    |    
T  8541155 c 8541155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 338 - 437
Target Start/End: Complemental strand, 8606494 - 8606394
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcatacataaaaa 436  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||  || |||||||||||||| |||| || ||||||||||||||||| |||||    
T  8606494 aaaattatcatgaaacttaaaagtgattctcaagtagtttacttggaattgttaagttaatattctgacttcagaatgttctgaagttcatacacaaaaa 8606395  T
Q  437 c 437  Q
    |    
T  8606394 c 8606394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 338 - 437
Target Start/End: Complemental strand, 18384400 - 18384300
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcatacataaaaa 436  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||  || |||||||||||||| |||| ||| |||||||||||||||| |||||    
T  18384400 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttgaaatggttaagttaatattctgacttcagaacattctgaagttcatacacaaaaa 18384301  T
Q  437 c 437  Q
    |    
T  18384300 c 18384300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 342 - 430
Target Start/End: Complemental strand, 2117906 - 2117817
Alignment:
Q  342 ttatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcataca 430  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||  |||||| |||| ||||||||||||||||||||    
T  2117906 ttatcctgaaacttaaaagtgattctcaagtagtttacttggaatagttaagttaactttctgacttcagaacgttctgaagttcataca 2117817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 338 - 441
Target Start/End: Original strand, 2369427 - 2369531
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcatacataaaaa 436  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||| || ||||| |||||||| |||| || ||| ||||||||||||| |||||    
T  2369427 aaaattatcctgaaacttaaaagtgattctcaagttgtttactttgaatagttaagttagtattctgacttcagaatgttatgaagttcatacacaaaaa 2369526  T
Q  437 ctgat 441  Q
    |||||    
T  2369527 ctgat 2369531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 347 - 437
Target Start/End: Complemental strand, 37013400 - 37013309
Alignment:
Q  347 ctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcatacataaaaac 437  Q
    |||||| |||||||||||||||||||||||||||||||||| || |||||||||||||| |||| ||| || ||||||||||||| ||||||    
T  37013400 ctgaaatttaaaagtgattctcaagtagtttacttggaatagttaagttaatattctgacttcagaacattatgaagttcatacacaaaaac 37013309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 42035272 - 42035181
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcata 428  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||  || ||| |||| ||||||||||||||||||    
T  42035272 aaaattatcctgaaacttaaaagtgattctcaagttgtttacttggaatagttaagttaactttatgacttcacaacgttctgaagttcata 42035181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 354 - 439
Target Start/End: Complemental strand, 13966086 - 13966000
Alignment:
Q  354 ttaaaagtgattctcaagtagtttacttggaataatta-gttaatattctgatttcataacgttctgaagttcatacataaaaactg 439  Q
    |||||||| ||||||||||||||||||||||||| ||| ||||||||||||| |||| |||||| ||||||||||||| ||||||||    
T  13966086 ttaaaagtaattctcaagtagtttacttggaatagttaagttaatattctgacttcagaacgttatgaagttcatacacaaaaactg 13966000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 342 - 426
Target Start/End: Original strand, 30548634 - 30548718
Alignment:
Q  342 ttatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttca 426  Q
    |||||||||||||||| |||||||||||||||| |||||||||||| ||||||||  |||||| |||| |||||| |||||||||    
T  30548634 ttatcctgaaacttaagagtgattctcaagtagattacttggaatagttagttaactttctgacttcagaacgttatgaagttca 30548718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 16155936 - 16155848
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  16155936 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 16155848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 21459681 - 21459593
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  21459681 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 21459593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 25020521 - 25020433
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||  |||||  |||||| |||| || ||||| |||||||||    
T  25020521 aaaattatcctgaaacttaaaaatgattctcaagtagtttacttggaattat--gttaactttctgacttcagaatgttctaaagttcata 25020433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0873 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0873
Description:

Target: scaffold0873; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 338 - 430
Target Start/End: Original strand, 4809 - 4902
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcataca 430  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||  |||||| |||| ||||||||||||||||||||    
T  4809 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaatagttaagttaactttctgacttcagaacgttctgaagttcataca 4902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0611 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0611
Description:

Target: scaffold0611; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 338 - 437
Target Start/End: Complemental strand, 9167 - 9067
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcatacataaaaa 436  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||  |||||| |||| |||||| ||||||||||||| |||||    
T  9167 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaatagttaagttaactttctgacttcagaacgttatgaagttcatacacaaaaa 9068  T
Q  437 c 437  Q
    |    
T  9067 c 9067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0591 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0591
Description:

Target: scaffold0591; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 338 - 429
Target Start/End: Complemental strand, 270 - 178
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcatac 429  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||| |||| |||||||||||||||||||    
T  270 aaaattaacctgaaacttaaaagtgattcttaagtagtttacttggaatagttaagttaatattctgacttcagaacgttctgaagttcatac 178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 2e-28; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 342 - 437
Target Start/End: Complemental strand, 20968894 - 20968798
Alignment:
Q  342 ttatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcatacataaaaac 437  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||  |||||| |||| |||||||||||||||||||| ||||||    
T  20968894 ttatcctgaaacttaaaagtgattctcaagtagtttacttggaatagttaagttaactttctgacttcagaacgttctgaagttcatacacaaaaac 20968798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 338 - 437
Target Start/End: Complemental strand, 18202603 - 18202503
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcatacataaaaa 436  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||| || ||||||||| |||| |||| |||||||| ||||| ||||| |||||    
T  18202603 aaaattaacctgaaatttaaaagtgattctcaagtagtttacttggaatagttaagttaatatcctgacttcagaacgttctaaagttaatacacaaaaa 18202504  T
Q  437 c 437  Q
    |    
T  18202503 c 18202503  T

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Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 12456106 - 12456018
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  12456106 aaaattatcctgaaacttaaaagtgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 12456018  T

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Target: chr6; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 3286899 - 3286811
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  3286899 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 3286811  T

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Target: chr6; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 16898999 - 16898911
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  16898999 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 16898911  T

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Target: chr6; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 16909652 - 16909564
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  16909652 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 16909564  T

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Target: chr6; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 18170926 - 18170838
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  18170926 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 18170838  T

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Target: chr6; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 20913335 - 20913247
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  20913335 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 20913247  T

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Target: chr6; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Original strand, 24930042 - 24930130
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  24930042 aaaattatcctgaaacttaaaattgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 24930130  T

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Target: chr6; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 26439882 - 26439794
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  26439882 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 26439794  T

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Target: chr6; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 31358614 - 31358526
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  31358614 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 31358526  T

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Target: chr6; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 31368344 - 31368256
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  31368344 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 31368256  T

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Target: chr6; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 14792655 - 14792567
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || ||||| |||||||||    
T  14792655 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctcaagttcata 14792567  T

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Target: chr6; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 18161114 - 18161026
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| || | || |||||||||||||||    
T  18161114 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgactttagaatgttctgaagttcata 18161026  T

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Target: chr6; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 338 - 428
Target Start/End: Original strand, 24921006 - 24921094
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||| ||| ||  |||||  |||||| |||| || |||||||||||||||    
T  24921006 aaaattatcctgaaacttaaaattgattctcaagttgtttacttgaaattat--gttaactttctgacttcagaatgttctgaagttcata 24921094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 338 - 439
Target Start/End: Complemental strand, 29541502 - 29541400
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcatacataaaaa 436  Q
    ||||||||||||||||||||||||||||||||||| ||||||||  | |  || | ||||  |||||| |||| |||||||||||||||||| | |||||    
T  29541502 aaaattatcctgaaacttaaaagtgattctcaagttgtttacttatattggttaaattaactttctgacttcagaacgttctgaagttcataaacaaaaa 29541403  T
Q  437 ctg 439  Q
    |||    
T  29541402 ctg 29541400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 338 - 430
Target Start/End: Complemental strand, 415 - 322
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcataca 430  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||  |||||| |||| |||||||||||| |||||||    
T  415 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaatagttaagttaactttctgacttcagaacgttctgaagctcataca 322  T

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Target: scaffold0168 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 342 - 430
Target Start/End: Complemental strand, 6529 - 6440
Alignment:
Q  342 ttatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcataca 430  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||  |||||| |||| ||||||||||||||||||||    
T  6529 ttatcctgaaacttaaaagtgattctcaagtagtttacttggaatagttaagttaactttctgacttcagaacgttctgaagttcataca 6440  T

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Target: scaffold0043 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 338 - 435
Target Start/End: Original strand, 91890 - 91988
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcatacataaaa 435  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||  ||||||  ||| |||||||||||||||||||| ||||    
T  91890 aaaattatcctgaaacttaaaagtgattctcaagtattttacttggaatagttaagttaactttctgacatcagaacgttctgaagttcatacacaaaa 91988  T

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Target: scaffold0106 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 338 - 437
Target Start/End: Original strand, 18 - 118
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaat-aattagttaatattctgatttcataacgttctgaagttcatacataaaaa 436  Q
    |||||||| |||||||||||| |||||||||||||||||||||| |||| ||| ||||||  |||||| |||| |||||||||||||||||||| |||||    
T  18 aaaattattctgaaacttaaaggtgattctcaagtagtttactttgaataaataagttaagtttctgacttcagaacgttctgaagttcatacacaaaaa 117  T
Q  437 c 437  Q
    |    
T  118 c 118  T

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Target: scaffold0047 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 342 - 430
Target Start/End: Original strand, 73742 - 73831
Alignment:
Q  342 ttatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcataca 430  Q
    |||||||||||||||||||| |||||||||||| |||||||||||| || ||||||  |||||| |||| ||||||||||||||||||||    
T  73742 ttatcctgaaacttaaaagtaattctcaagtagattacttggaatagttaagttaactttctgacttcagaacgttctgaagttcataca 73831  T

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Target: scaffold0014 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 338 - 439
Target Start/End: Complemental strand, 147763 - 147661
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataatt-agttaatattctgatttcataacgttctgaagttcatacataaaaa 436  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||| || ||||||  |||||| || | |||||||||||||| ||| | |||||    
T  147763 aaaattatcctgaaacttaaaagtaattctcaagttgtttacttggaatagttaagttaactttctgactttagaacgttctgaagtttataaacaaaaa 147664  T
Q  437 ctg 439  Q
    |||    
T  147663 ctg 147661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Original strand, 233004 - 233092
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  233004 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 233092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Original strand, 18378 - 18466
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  18378 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 18466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 428
Target Start/End: Original strand, 309035 - 309123
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  309035 aaaattatcctgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 309123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 338 - 428
Target Start/End: Original strand, 14945 - 15033
Alignment:
Q  338 aaaattatcctgaaacttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    |||||||| ||||||||||||| |||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  14945 aaaattatactgaaacttaaaaatgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 15033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 428
Target Start/End: Original strand, 6872 - 6946
Alignment:
Q  352 acttaaaagtgattctcaagtagtttacttggaataattagttaatattctgatttcataacgttctgaagttcata 428  Q
    ||||||||||||||||||||| ||||||||||||| ||  |||||  |||||| |||| || |||||||||||||||    
T  6872 acttaaaagtgattctcaagttgtttacttggaattat--gttaactttctgacttcagaatgttctgaagttcata 6946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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