View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6021_high_103 (Length: 237)
Name: NF6021_high_103
Description: NF6021
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6021_high_103 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 17 - 237
Target Start/End: Original strand, 45446972 - 45447192
Alignment:
| Q |
17 |
cagtgagtggatagaagactccataaaaatcatgagtttgatacttcgtcttctccatcctcttcctcaaactcacactaacaccattcccaaactcaat |
116 |
Q |
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| T |
45446972 |
cagtgagtggatagaagactccataaaaatcatgagtttgatacttcgtcttctccatcctcttcctcaaactcacactaacaccattcccaaactcaat |
45447071 |
T |
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| Q |
117 |
tctgataataaacaaaagttcctaccaaatctcttctctctagccattgctgtaacattaacatctccactgccttctcatgcaatcccatccctcaatt |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |
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| T |
45447072 |
tctgataataaacaaaagttcctaccaaatctcttctctctagccattgctgtaacattaacatctccactaccttctcatgcaatcccttccctcaatt |
45447171 |
T |
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| Q |
217 |
ctcaaccccctccaaccactc |
237 |
Q |
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||||||||||||||||||||| |
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| T |
45447172 |
ctcaaccccctccaaccactc |
45447192 |
T |
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