View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6021_high_21 (Length: 421)
Name: NF6021_high_21
Description: NF6021
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6021_high_21 |
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Alignment Details
Target: chr6 (Bit Score: 376; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 376; E-Value: 0
Query Start/End: Original strand, 10 - 405
Target Start/End: Original strand, 27091961 - 27092356
Alignment:
| Q |
10 |
aagaatatgcgagctaaggtaacatttattattgtttctttgttaagaagtgaaactttttatgtgcagattctcccttataaatgagtttgaatttaat |
109 |
Q |
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| T |
27091961 |
aagaaaatgcgagctaaggtaacatttattattgtttctttgttaagaagtgaaactttttatgtgcagattctcccttataaatgagtttgaatttaat |
27092060 |
T |
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| Q |
110 |
tcttgacactatcactgaatagagttgtaattatcactgcatgtttagtgaacaaaaaataatcctatgaagtaggtagagactatattcaaatcctaca |
209 |
Q |
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| T |
27092061 |
tcttgacactatcactgaatagagttgtaattatcactgcatgtatagtgaacaaaaaataatcctataaagtaggtagagactatattcaaatcctaca |
27092160 |
T |
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| Q |
210 |
attagttatttttgtttgatgacattattaagtgagtctgatttagtgattattatgatatgcgttcattctaatgtctttgtcatgtatgtgtttgata |
309 |
Q |
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| T |
27092161 |
attagttatttttgtttgatgacatgattaagtgagtctggtttagtgattattatgatatgcgttcattctaatgtctttgtcatgtatgtgtttgata |
27092260 |
T |
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| Q |
310 |
gcttctggatcctatcagaagctcattttgattaataaccattaacaaaagcagttttaaaacaatgctaactaacaattcattgatatttatatg |
405 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27092261 |
gcttctggatcctatcagaagctcattttgattaataaccattaacaaaagcagttttaaaacaatgctaactaacaattcattgatatttatatg |
27092356 |
T |
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