View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6021_high_68 (Length: 282)
Name: NF6021_high_68
Description: NF6021
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6021_high_68 |
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Alignment Details
Target: chr1 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 6 - 266
Target Start/End: Original strand, 22815690 - 22815953
Alignment:
| Q |
6 |
agaagcaaaggaaagaagaaatattatgcaacctagctagattgaatgagtcacaagtgtaccacaagctattaatnnnnnnnnnnnt---taattaagt |
102 |
Q |
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| T |
22815690 |
agaatcaaaggaaagaagaaatattatgcaacctagctagcttgaatgagtcacaagtgtgccacaagctattaataaaaaaaaatataattaattaagt |
22815789 |
T |
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| Q |
103 |
taaataaaaattatagaatattgtaatgggcatcttaatagggtaatttttaatgttagataaagatactggcataaattcagaaaacaatagatctgaa |
202 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22815790 |
taaataaaaactatagaatattgtaatgggcatcttaatagggtaatttttaatgttagataaagatactggcataaattcagaaaacaatagatctgaa |
22815889 |
T |
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| Q |
203 |
attattcttaaaagtgattcggaagaaaagattaatagaaatggagatagccaaatctaccttt |
266 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22815890 |
attattcttaaaagtgattcggaagaaaagattaatagaaatggagatagccaaatctaccttt |
22815953 |
T |
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