View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6021_low_2 (Length: 906)

Name: NF6021_low_2
Description: NF6021
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6021_low_2
NF6021_low_2
[»] chr5 (6 HSPs)
chr5 (10-402)||(37035721-37036113)
chr5 (543-891)||(37036241-37036589)
chr5 (550-651)||(4940821-4940922)
chr5 (8-60)||(21309502-21309554)
chr5 (574-624)||(5344640-5344690)
chr5 (689-741)||(14323077-14323130)
[»] scaffold0137 (1 HSPs)
scaffold0137 (547-624)||(21581-21658)
[»] chr7 (9 HSPs)
chr7 (543-624)||(44481493-44481574)
chr7 (549-639)||(27262464-27262554)
chr7 (545-623)||(35303536-35303614)
chr7 (552-624)||(28554373-28554445)
chr7 (549-639)||(27269329-27269419)
chr7 (577-622)||(22569125-22569170)
chr7 (545-639)||(28554568-28554662)
chr7 (553-602)||(27247085-27247134)
chr7 (689-750)||(39226691-39226752)
[»] chr4 (7 HSPs)
chr4 (543-624)||(4064608-4064689)
chr4 (545-624)||(32116709-32116790)
chr4 (545-649)||(36491582-36491686)
chr4 (577-624)||(13635264-13635311)
chr4 (543-623)||(31279782-31279862)
chr4 (545-627)||(37342351-37342432)
chr4 (547-624)||(10117073-10117150)
[»] chr3 (11 HSPs)
chr3 (549-614)||(48971868-48971933)
chr3 (545-624)||(3918271-3918350)
chr3 (545-651)||(26004566-26004675)
chr3 (548-624)||(38309816-38309892)
chr3 (545-611)||(35107790-35107855)
chr3 (544-623)||(265600-265679)
chr3 (689-746)||(24228465-24228523)
chr3 (545-611)||(35311024-35311090)
chr3 (545-623)||(37671499-37671577)
chr3 (544-629)||(29063652-29063736)
chr3 (577-650)||(30821561-30821634)
[»] chr1 (15 HSPs)
chr1 (545-614)||(30748462-30748531)
chr1 (545-614)||(30769913-30769982)
chr1 (545-614)||(45487955-45488024)
chr1 (547-609)||(48583623-48583685)
chr1 (550-600)||(52595167-52595217)
chr1 (543-624)||(3592430-3592511)
chr1 (563-615)||(27494807-27494859)
chr1 (688-751)||(41900977-41901041)
chr1 (549-624)||(7193620-7193695)
chr1 (545-599)||(11354879-11354934)
chr1 (547-614)||(25781733-25781799)
chr1 (545-595)||(25781568-25781618)
chr1 (545-611)||(32053693-32053759)
chr1 (544-598)||(46202691-46202745)
chr1 (545-606)||(26610569-26610630)
[»] chr8 (7 HSPs)
chr8 (545-639)||(19723562-19723654)
chr8 (577-621)||(22447418-22447462)
chr8 (577-624)||(8878454-8878501)
chr8 (549-624)||(13288136-13288211)
chr8 (544-614)||(32721874-32721944)
chr8 (545-614)||(8878646-8878715)
chr8 (550-623)||(13246972-13247045)
[»] chr6 (5 HSPs)
chr6 (545-611)||(8381946-8382011)
chr6 (689-741)||(28667030-28667082)
chr6 (544-611)||(32722836-32722903)
chr6 (582-627)||(6712512-6712557)
chr6 (544-624)||(27978374-27978455)
[»] chr2 (3 HSPs)
chr2 (556-650)||(1468665-1468759)
chr2 (545-608)||(32889820-32889884)
chr2 (545-599)||(23214467-23214521)


Alignment Details
Target: chr5 (Bit Score: 321; Significance: 0; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 10 - 402
Target Start/End: Original strand, 37035721 - 37036113
Alignment:
Q  10 acatcatcaatagtactagaagtatgcaggaaagagagaaggcagaattgggcaaatatcagcttttccggtctcagatgcggcaacacccattactagt 109  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  37035721 acataatcaatagtactagaagtatgcaggaaagagagaaggcagaattggacaaatagcagcttttccggtctcagatgcggcaacacccattactagt 37035820  T
Q  110 gttagcatgttatcactttccctcttttctcgcatgaggcaagcaaggcctgaaagagtgaatcgtcgaacagaaggaaggacttcgtactagggctgga 209  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||| | |||||||    
T  37035821 gttagcatgttatcactttctctcttttctcgcacgaggcaagcaaggcctgaaagagtgaatcgtcgaacaggaggaatgacttcgtaccaaggctgga 37035920  T
Q  210 atcaaagttgaaatttgtttctctttcaaagctagaagcacagttctggaagcaaagccaagttttatctctggttcacaagcttgacgttctcaaggcg 309  Q
    |||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  37035921 atcaaagtggaaattcgtttctctttcaaagctagaagcacacttctggaagcaaagccaagttctatctctggttcacaagcctgacgttctcaaggcg 37036020  T
Q  310 cggaacgctttggttcgtaagttaggttatctttctcttgacgctttcatgctttcaccttcggaaacttttatatattttaatgaaattcta 402  Q
     |||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37036021 tggaaggctttggttcgtaagtcaggttatctttctcctgacgctttcatgctttcaccttcggaaacttttatatattttaatgaaattcta 37036113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 543 - 891
Target Start/End: Original strand, 37036241 - 37036589
Alignment:
Q  543 aaagagattcttataatattttaatcattcttaaaaaatttcattcaaaaatatgaaggctacacatgagttaatttaaaagcaggaagtaaaagtgata 642  Q
    ||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  37036241 aaagagattcttataatattttaaatattcttaaaaaatttctttcaaaaatatgaaggcaacacatgagttaatttaaaagcaggaagcaaaagtgata 37036340  T
Q  643 atgaaaaacgtttcagagaatnnnnnnnnnnnnnnncttttaggaagactaaaacacaaaattgttatatttatatggactaaaatatatttaaccctac 742  Q
    ||||||||| ||| |||||||               |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  37036341 atgaaaaacatttgagagaataaaaatcaaaaaaaacttttaggaagactaaaacacaaaattgttatatttgtatggactaaaacatatttaaccctac 37036440  T
Q  743 tttttattaatgcaataatcgtaagacacttcgtaagattctctttcttctacctctccaaaaagaaaaacattctcnnnnnnnnaatnnnnnnngttga 842  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||        |||       |||||    
T  37036441 tttttattaatgcaataatcttaagacacttcctaagattctctttcttctacctctccaaaaagaaaaacattctcttttttctaataaaaaaagttga 37036540  T
Q  843 gactataatttttggtaagccttctataagtaagtagtactattatttt 891  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  37036541 gactataatttttggtaagccttctataagtaagtagtactattttttt 37036589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 550 - 651
Target Start/End: Complemental strand, 4940922 - 4940821
Alignment:
Q  550 ttcttataatattttaatcattcttaaaaaatttcattcaaaaatatgaaggctacacatgagttaatttaaaagcaggaagtaaaagtgataatgaaaa 649  Q
    ||||||||||||| ||| |||| ||||||||  | |||| |||||||||||||||||| |||||| ||||||||  |||||  ||||||||| |||||||    
T  4940922 ttcttataatattctaaacatttttaaaaaaaattattctaaaatatgaaggctacacttgagttgatttaaaaataggaaccaaaagtgatcatgaaaa 4940823  T
Q  650 ac 651  Q
    ||    
T  4940822 ac 4940821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 21309554 - 21309502
Alignment:
Q  8 ggacatcatcaatagtactagaagtatgcaggaaagagagaaggcagaattgg 60  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  21309554 ggacatgatcaatagtactagaagtatacaggaaagagagaaggcagaattgg 21309502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 574 - 624
Target Start/End: Complemental strand, 5344690 - 5344640
Alignment:
Q  574 taaaaaatttcattcaaaaatatgaaggctacacatgagttaatttaaaag 624  Q
    |||||||||||||||||||||||||||| ||||| |||||| | |||||||    
T  5344690 taaaaaatttcattcaaaaatatgaaggttacacttgagttgacttaaaag 5344640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 689 - 741
Target Start/End: Original strand, 14323077 - 14323130
Alignment:
Q  689 gactaaaacacaaaattgttatatttatatggactaaaat-atatttaacccta 741  Q
    |||||||||  ||| ||| ||||||||||||||||||||| |||||||||||||    
T  14323077 gactaaaacgaaaagttgatatatttatatggactaaaatcatatttaacccta 14323130  T

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Target: scaffold0137 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 547 - 624
Target Start/End: Complemental strand, 21658 - 21581
Alignment:
Q  547 agattcttataatattttaatcattcttaaaaaatttcattcaaaaatatgaaggctacacatgagttaatttaaaag 624  Q
    |||||||||||||||| ||| |||||||  ||||||||||| |||||||||||| ||||||||| ||| | |||||||    
T  21658 agattcttataatattctaaacattcttgtaaaatttcattaaaaaatatgaagtctacacatgcgttgacttaaaag 21581  T

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Target: chr7 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 543 - 624
Target Start/End: Complemental strand, 44481574 - 44481493
Alignment:
Q  543 aaagagattcttataatattttaatcattcttaaaaaatttcattcaaaaatatgaaggctacacatgagttaatttaaaag 624  Q
    |||| ||| ||||||||||| | | ||||| ||||||||||||||||||||||||||||||||| || |||| | |||||||    
T  44481574 aaagtgatacttataatattcttaacattcctaaaaaatttcattcaaaaatatgaaggctacatataagttgacttaaaag 44481493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 549 - 639
Target Start/End: Original strand, 27262464 - 27262554
Alignment:
Q  549 attcttataatattttaatcattcttaaaaaatttcattcaaaaatatgaaggctacacatgagttaatttaaaagcaggaagtaaaagtg 639  Q
    |||||||||||||| ||| | || | |||||||||||||||||||||||||| ||| | ||||||| | |||| |||||| | ||||||||    
T  27262464 attcttataatattctaaaccttttgaaaaaatttcattcaaaaatatgaagactagatatgagttgacttaatagcagggactaaaagtg 27262554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 545 - 623
Target Start/End: Complemental strand, 35303614 - 35303536
Alignment:
Q  545 agagattcttataatattttaatcattcttaaaaaatttcattcaaaaatatgaaggctacacatgagttaatttaaaa 623  Q
    |||||||||||||||||| ||| |||| ||   ||||||||||||||||||||||| |||||||| |||| | ||||||    
T  35303614 agagattcttataatattctaaacattattgctaaatttcattcaaaaatatgaagtctacacataagttgacttaaaa 35303536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 552 - 624
Target Start/End: Complemental strand, 28554445 - 28554373
Alignment:
Q  552 cttataatattttaatcattcttaaaaaatttcattcaaaaatatgaaggctacacatgagttaatttaaaag 624  Q
    |||||||| || ||| ||||  |||||||||||||||||||||||||||  ||||||| |||| |||||||||    
T  28554445 cttataatgttataaacatttctaaaaaatttcattcaaaaatatgaagagtacacataagttgatttaaaag 28554373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 549 - 639
Target Start/End: Original strand, 27269329 - 27269419
Alignment:
Q  549 attcttataatattttaatcattcttaaaaaatttcattcaaaaatatgaaggctacacatgagttaatttaaaagcaggaagtaaaagtg 639  Q
    |||||||||||||| ||| | || | |||||||||||||||||||||||||| ||| | ||||||| | |||| || ||| | ||||||||    
T  27269329 attcttataatattctaaaccttttgaaaaaatttcattcaaaaatatgaagactagatatgagttgacttaatagtagggactaaaagtg 27269419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 577 - 622
Target Start/End: Complemental strand, 22569170 - 22569125
Alignment:
Q  577 aaaatttcattcaaaaatatgaaggctacacatgagttaatttaaa 622  Q
    ||||||||||||||||||||||||  |||||||||||| |||||||    
T  22569170 aaaatttcattcaaaaatatgaagtatacacatgagttgatttaaa 22569125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 639
Target Start/End: Original strand, 28554568 - 28554662
Alignment:
Q  545 agagattcttataatattttaatcattcttaaaaaatttcattcaaaaatatgaaggctacacatgagttaatttaaaagcaggaagtaaaagtg 639  Q
    ||||||||||||||| || ||  ||||| | ||||| |||||| |||||| |||||| |||||| ||||| ||||| ||| ||| || |||||||    
T  28554568 agagattcttataatgttatagacattcctgaaaaaattcattaaaaaatgtgaaggatacacaagagttgatttagaagtagggagcaaaagtg 28554662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 553 - 602
Target Start/End: Original strand, 27247085 - 27247134
Alignment:
Q  553 ttataatattttaatcattcttaaaaaatttcattcaaaaatatgaaggc 602  Q
    |||||||||| ||| | ||  |||||||||||||||||||||||||||||    
T  27247085 ttataatattctaaacctttctaaaaaatttcattcaaaaatatgaaggc 27247134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 689 - 750
Target Start/End: Original strand, 39226691 - 39226752
Alignment:
Q  689 gactaaaacacaaaattgttatatttatatggactaaaatatatttaaccctactttttatt 750  Q
    |||||||||| ||| ||| |||||||||| |||| |||| |||||||||||||  |||||||    
T  39226691 gactaaaacaaaaagttgatatatttataaggaccaaaacatatttaaccctatattttatt 39226752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 543 - 624
Target Start/End: Complemental strand, 4064689 - 4064608
Alignment:
Q  543 aaagagattcttataatattttaatcattcttaaaaaatttcattcaaaaatatgaaggctacacatgagttaatttaaaag 624  Q
    |||||||||||||||||||| ||| ||||  |  ||||||||||| |||||||||||| ||||| ||||||| |||||||||    
T  4064689 aaagagattcttataatattctaaacatttctgcaaaatttcattaaaaaatatgaagactacaaatgagttgatttaaaag 4064608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 545 - 624
Target Start/End: Original strand, 32116709 - 32116790
Alignment:
Q  545 agagattcttataatattttaatcattcttaaaaaatt--tcattcaaaaatatgaaggctacacatgagttaatttaaaag 624  Q
    |||||||||||||||||| ||| ||||  |||||||||  ||||||||||||||||| |||||||||| ||| | |||||||    
T  32116709 agagattcttataatattctaaacatttctaaaaaattgatcattcaaaaatatgaaagctacacatgggttgagttaaaag 32116790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 545 - 649
Target Start/End: Complemental strand, 36491686 - 36491582
Alignment:
Q  545 agagattcttataatattttaatcattcttaaaaaatttcattcaaaaatatgaaggctacacatgagttaatttaaaagcaggaagtaaaagtgataat 644  Q
    ||||||| |||||||||| ||||||||  |  ||||||||||| |||||||||||  ||||||||||||| | |||| || ||| | |||||||| | ||    
T  36491686 agagatttttataatattctaatcatttatgcaaaatttcattaaaaaatatgaaatctacacatgagttgacttaataggagggactaaaagtggtgat 36491587  T
Q  645 gaaaa 649  Q
    |||||    
T  36491586 gaaaa 36491582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 577 - 624
Target Start/End: Original strand, 13635264 - 13635311
Alignment:
Q  577 aaaatttcattcaaaaatatgaaggctacacatgagttaatttaaaag 624  Q
    |||||||||||||||||||||||| ||||||||| ||| |||||||||    
T  13635264 aaaatttcattcaaaaatatgaagactacacatgggttgatttaaaag 13635311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 543 - 623
Target Start/End: Original strand, 31279782 - 31279862
Alignment:
Q  543 aaagagattcttataatattttaatcattcttaaaaaatttcattcaaaaatatgaaggctacacatgagttaatttaaaa 623  Q
    ||||||||| |||||||||| ||| ||||||| |||| || |||||||||||| |||| ||||| || |||| | ||||||    
T  31279782 aaagagattattataatattctaaacattcttcaaaatttacattcaaaaatacgaagactacatataagttgacttaaaa 31279862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 627
Target Start/End: Complemental strand, 37342432 - 37342351
Alignment:
Q  545 agagattcttataatattttaatcattcttaaaaaatttcattcaaaaatatgaaggctacacatgagttaatttaaaagcag 627  Q
    |||||||||||||||||| ||| |||||||  ||||  ||||| |||| | |||| | |||||||||||| ||||||||||||    
T  37342432 agagattcttataatattctaaacattcttgtaaaa-ctcatttaaaattctgaatgatacacatgagttgatttaaaagcag 37342351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 547 - 624
Target Start/End: Original strand, 10117073 - 10117150
Alignment:
Q  547 agattcttataatattttaatcattcttaaaaaatttcattcaaaaatatgaaggctacacatgagttaatttaaaag 624  Q
    |||||||||||||||| ||| ||||  | |||||||| ||| ||||||||||||  || |||||| |||| |||||||    
T  10117073 agattcttataatattctaaacatttctgaaaaatttgattaaaaaatatgaagtttagacatgaattaacttaaaag 10117150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 549 - 614
Target Start/End: Original strand, 48971868 - 48971933
Alignment:
Q  549 attcttataatattttaatcattcttaaaaaatttcattcaaaaatatgaaggctacacatgagtt 614  Q
    |||||||||||||||||| |||| ||||||||  ||||||||||||||||||| || |||||||||    
T  48971868 attcttataatattttaaacatttttaaaaaaactcattcaaaaatatgaaggttatacatgagtt 48971933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 545 - 624
Target Start/End: Complemental strand, 3918350 - 3918271
Alignment:
Q  545 agagattcttataatattttaatcattcttaaaaaatttcattcaaaaatatgaaggctacacatgagttaatttaaaag 624  Q
    |||||||||||||||||| ||| |||||||  ||| ||||||| |||||||||||| ||||||||| ||| | |||||||    
T  3918350 agagattcttataatattctaaacattcttgtaaattttcattaaaaaatatgaagtctacacatgcgttgacttaaaag 3918271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 545 - 651
Target Start/End: Complemental strand, 26004675 - 26004566
Alignment:
Q  545 agagattcttataatattttaatcattcttaaaaaatttcattcaaaaatatgaaggctac----acatgagttaatttaaaagcaggaagtaaaagtga 640  Q
    |||| ||||||||||||| ||| ||||||||||||| || |||||||||||||||||||||    ||||||||| ||||||| | ||| |  ||||||||    
T  26004675 agaggttcttataatattctaaacattcttaaaaaaatt-attcaaaaatatgaaggctacgtatacatgagttgatttaaatgtagggacaaaaagtga 26004577  T
Q  641 taatgaaaaac 651  Q
    | || ||||||    
T  26004576 tgattaaaaac 26004566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 548 - 624
Target Start/End: Complemental strand, 38309892 - 38309816
Alignment:
Q  548 gattcttataatattttaatcattcttaaaaaatttcattcaaaaatatgaaggctacacatgagttaatttaaaag 624  Q
    ||||||||||||||| ||| ||||  | |||||||||||| |||||||||| ||||||||| ||||| | |||||||    
T  38309892 gattcttataatattctaaacatttctgaaaaatttcattaaaaaatatgatggctacacaagagttgacttaaaag 38309816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 545 - 611
Target Start/End: Original strand, 35107790 - 35107855
Alignment:
Q  545 agagattcttataatattttaatcattcttaaaaaatttcattcaaaaatatgaaggctacacatga 611  Q
    |||||||||||||||||||||||||||| || ||||  ||||| |||||| |||||| |||||||||    
T  35107790 agagattcttataatattttaatcattcctacaaaaactcattaaaaaat-tgaagggtacacatga 35107855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 544 - 623
Target Start/End: Original strand, 265600 - 265679
Alignment:
Q  544 aagagattcttataatattttaatcattcttaaaaaatttcattcaaaaatatgaaggctacacatgagttaatttaaaa 623  Q
    |||||| | |||||||||| ||| ||| | |  |||| |||||||||||||||||| | |||||||||||| ||||||||    
T  265600 aagagaatgttataatattctaaacatccatgtaaaaattcattcaaaaatatgaatggtacacatgagttgatttaaaa 265679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 689 - 746
Target Start/End: Complemental strand, 24228523 - 24228465
Alignment:
Q  689 gactaaaacacaaaattgttatatttatatggactaaaa-tatatttaaccctactttt 746  Q
    |||||||||| ||||||| |||||||||| ||| ||||| |||||||||||||| ||||    
T  24228523 gactaaaacaaaaaattggtatatttatagggattaaaaatatatttaaccctattttt 24228465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 611
Target Start/End: Complemental strand, 35311090 - 35311024
Alignment:
Q  545 agagattcttataatattttaatcattcttaaaaaatttcattcaaaaatatgaaggctacacatga 611  Q
    ||||||| |||||||||||||| ||||  |  ||||||| ||||||||||||||||  |||||||||    
T  35311090 agagatttttataatattttaaacatttctgcaaaattttattcaaaaatatgaagaatacacatga 35311024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 623
Target Start/End: Complemental strand, 37671577 - 37671499
Alignment:
Q  545 agagattcttataatattttaatcattcttaaaaaatttcattcaaaaatatgaaggctacacatgagttaatttaaaa 623  Q
    |||||||||||||||||  ||  ||||| |  ||||||||||||||||||||| || || |||||||||| | ||||||    
T  37671577 agagattcttataatatactatacattcctgcaaaatttcattcaaaaatatgcagtctgcacatgagttgacttaaaa 37671499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 544 - 629
Target Start/End: Complemental strand, 29063736 - 29063652
Alignment:
Q  544 aagagattcttataatattttaatcattcttaaaaaatttcattcaaaaatatgaaggctacacatgagttaatttaaaagcagga 629  Q
    |||| ||||||||||||||||||  |||| | |||| ||||||| |||||||||| ||||||| || |||| | ||||||| ||||    
T  29063736 aagaaattcttataatattttaaatattcctgaaaattttcatt-aaaaatatgagggctacatataagttgacttaaaagtagga 29063652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 577 - 650
Target Start/End: Original strand, 30821561 - 30821634
Alignment:
Q  577 aaaatttcattcaaaaatatgaaggctacacatgagttaatttaaaagcaggaagtaaaagtgataatgaaaaa 650  Q
    |||||||||||||||||||||||  ||||| ||||||| |||| |||| ||| |  |||||||| |||| ||||    
T  30821561 aaaatttcattcaaaaatatgaattctacatatgagtttattttaaaggagggaccaaaagtgaaaatggaaaa 30821634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 545 - 614
Target Start/End: Complemental strand, 30748531 - 30748462
Alignment:
Q  545 agagattcttataatattttaatcattcttaaaaaatttcattcaaaaatatgaaggctacacatgagtt 614  Q
    |||||||||||||||||| ||||||||  ||||| |||||||| ||||||||||||| |||| |||||||    
T  30748531 agagattcttataatattctaatcatttctaaaatatttcattaaaaaatatgaaggttacatatgagtt 30748462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 545 - 614
Target Start/End: Complemental strand, 30769982 - 30769913
Alignment:
Q  545 agagattcttataatattttaatcattcttaaaaaatttcattcaaaaatatgaaggctacacatgagtt 614  Q
    |||||||||||||||||| ||||||||  ||||| |||||||| ||||||||||||| |||| |||||||    
T  30769982 agagattcttataatattctaatcatttctaaaatatttcattaaaaaatatgaaggttacatatgagtt 30769913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 545 - 614
Target Start/End: Complemental strand, 45488024 - 45487955
Alignment:
Q  545 agagattcttataatattttaatcattcttaaaaaatttcattcaaaaatatgaaggctacacatgagtt 614  Q
    |||||||||||||||||| ||| || | ||||||| |||||||||||||||| ||||||| |||||||||    
T  45488024 agagattcttataatattctaaacaatattaaaaattttcattcaaaaatattaaggctagacatgagtt 45487955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 547 - 609
Target Start/End: Complemental strand, 48583685 - 48583623
Alignment:
Q  547 agattcttataatattttaatcattcttaaaaaatttcattcaaaaatatgaaggctacacat 609  Q
    |||||||||||||||||||| | ||| | ||||| ||||||||||||| |||||| |||||||    
T  48583685 agattcttataatattttaaactttcatgaaaaagttcattcaaaaatttgaagggtacacat 48583623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 550 - 600
Target Start/End: Complemental strand, 52595217 - 52595167
Alignment:
Q  550 ttcttataatattttaatcattcttaaaaaatttcattcaaaaatatgaag 600  Q
    ||||||||||||||||| |||| | ||||||||||||||||||||| ||||    
T  52595217 ttcttataatattttaaacattttaaaaaaatttcattcaaaaatacgaag 52595167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 543 - 624
Target Start/End: Original strand, 3592430 - 3592511
Alignment:
Q  543 aaagagattcttataatattttaatcattcttaaaaaatttcattcaaaaatatgaaggctacacatgagttaatttaaaag 624  Q
    ||||||||| |||||||||| ||| || ||  |||||| ||||||||||||||||||| | |||||||| || | |||||||    
T  3592430 aaagagattattataatattctaaacagtccgaaaaaaattcattcaaaaatatgaagacaacacatgaattgaattaaaag 3592511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 563 - 615
Target Start/End: Complemental strand, 27494859 - 27494807
Alignment:
Q  563 ttaatcattcttaaaaaatttcattcaaaaatatgaaggctacacatgagtta 615  Q
    |||| ||||| ||||||  ||||||||||||||||||||||||||||| ||||    
T  27494859 ttaaacattcctaaaaatgttcattcaaaaatatgaaggctacacatgtgtta 27494807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 688 - 751
Target Start/End: Complemental strand, 41901041 - 41900977
Alignment:
Q  688 agactaaaacacaaaattgttatatttatatggactaaaat-atatttaaccctactttttatta 751  Q
    ||||||||||  ||||||| |||||||||| |||||||||  |||||||||| ||||||||||||    
T  41901041 agactaaaacgaaaaattgatatatttataaggactaaaaacatatttaaccttactttttatta 41900977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 549 - 624
Target Start/End: Complemental strand, 7193695 - 7193620
Alignment:
Q  549 attcttataatattttaatcattcttaaaaaatttcattcaaaaatatgaaggctacacatgagttaatttaaaag 624  Q
    |||||||||||||||||| ||||| |  ||||  |||||||||||| | ||||  |||||||| ||||||||||||    
T  7193695 attcttataatattttaaacattcatgtaaaagctcattcaaaaatttaaaggacacacatgatttaatttaaaag 7193620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 545 - 599
Target Start/End: Original strand, 11354879 - 11354934
Alignment:
Q  545 agagattcttataatattttaatcattcttaaaaa-atttcattcaaaaatatgaa 599  Q
    |||||||||||||||| |||||  ||||||||||| |||| |||||||||||||||    
T  11354879 agagattcttataataatttaaatattcttaaaaagatttgattcaaaaatatgaa 11354934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 614
Target Start/End: Original strand, 25781733 - 25781799
Alignment:
Q  547 agattcttataatattttaatcattcttaaaaaatttcattcaaaaatatgaaggctacacatgagtt 614  Q
    |||||||||||||||| | | ||||||| | |||||| ||| |||||||||||||||||||| |||||    
T  25781733 agattcttataatattcttaacattcttgataaattt-atttaaaaatatgaaggctacacaagagtt 25781799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 595
Target Start/End: Complemental strand, 25781618 - 25781568
Alignment:
Q  545 agagattcttataatattttaatcattcttaaaaaatttcattcaaaaata 595  Q
    |||||||||||||||||||||| |||| |  |||| |||||||||||||||    
T  25781618 agagattcttataatattttaaacattttcgaaaattttcattcaaaaata 25781568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 611
Target Start/End: Original strand, 32053693 - 32053759
Alignment:
Q  545 agagattcttataatattttaatcattcttaaaaaatttcattcaaaaatatgaaggctacacatga 611  Q
    ||||||||||| |||||| ||| ||||| |  ||| ||| |||||||||||||||| ||||||||||    
T  32053693 agagattcttaaaatattctaaacattcatggaaatttttattcaaaaatatgaagactacacatga 32053759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 544 - 598
Target Start/End: Complemental strand, 46202745 - 46202691
Alignment:
Q  544 aagagattcttataatattttaatcattcttaaaaaatttcattcaaaaatatga 598  Q
    |||||||||||||||||||||||  |||| || ||||  ||||||||||||||||    
T  46202745 aagagattcttataatattttaaatattcatataaaaactcattcaaaaatatga 46202691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 606
Target Start/End: Complemental strand, 26610630 - 26610569
Alignment:
Q  545 agagattcttataatattttaatcattcttaaaaaatttcattcaaaaatatgaaggctaca 606  Q
    |||||||||| ||||||| |||  ||| || |||| |||||||||||||||| |||||||||    
T  26610630 agagattcttttaatattctaaaaatttttgaaaattttcattcaaaaatattaaggctaca 26610569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000003; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 545 - 639
Target Start/End: Original strand, 19723562 - 19723654
Alignment:
Q  545 agagattcttataatattttaatcattcttaaaaaatttcattcaaaaatatgaaggctacacatgagttaatttaaaagcaggaagtaaaagtg 639  Q
    ||||||| |||||||||||||| ||||||  |||||||| |||| |||||||||||| ||||| |||||| | ||||||| | ||| ||||||||    
T  19723562 agagattgttataatattttaaacattctataaaaattt-attc-aaaatatgaaggttacacgtgagttgacttaaaagtatgaactaaaagtg 19723654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 577 - 621
Target Start/End: Complemental strand, 22447462 - 22447418
Alignment:
Q  577 aaaatttcattcaaaaatatgaaggctacacatgagttaatttaa 621  Q
    |||| |||||||||||||||||||| |||||||||||||| ||||    
T  22447462 aaaaattcattcaaaaatatgaagggtacacatgagttaacttaa 22447418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 577 - 624
Target Start/End: Complemental strand, 8878501 - 8878454
Alignment:
Q  577 aaaatttcattcaaaaatatgaaggctacacatgagttaatttaaaag 624  Q
    |||||||||||||||||||||| || ||||||||||||  ||||||||    
T  8878501 aaaatttcattcaaaaatatgatggttacacatgagttggtttaaaag 8878454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 549 - 624
Target Start/End: Original strand, 13288136 - 13288211
Alignment:
Q  549 attcttataatattttaatcattcttaaaaaatttcattcaaaaatatgaaggctacacatgagttaatttaaaag 624  Q
    ||||| |||||||||||| |||| || |||| ||||||||||||| |||||| | ||| || |||||| |||||||    
T  13288136 attctaataatattttaaacatttttgaaaattttcattcaaaaacatgaagaccacatataagttaacttaaaag 13288211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 544 - 614
Target Start/End: Complemental strand, 32721944 - 32721874
Alignment:
Q  544 aagagattcttataatattttaatcattcttaaaaaatttcattcaaaaatatgaaggctacacatgagtt 614  Q
    ||||||||||||||||||| ||||  || ||| ||||||| ||| |||||||||||  ||||| |||||||    
T  32721944 aagagattcttataatattataattttttttacaaaattttattgaaaaatatgaattctacatatgagtt 32721874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 614
Target Start/End: Original strand, 8878646 - 8878715
Alignment:
Q  545 agagattcttataatattttaatcattcttaaaaaatttcattcaaaaatatgaaggctacacatgagtt 614  Q
    ||||||||| |||||||| ||| |||||||||||||  |||||  |||||| ||||| |||||| |||||    
T  8878646 agagattctaataatattctaaacattcttaaaaaaaatcattttaaaatacgaaggttacacacgagtt 8878715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 550 - 623
Target Start/End: Original strand, 13246972 - 13247045
Alignment:
Q  550 ttcttataatattttaatcattcttaaaaaatttcattcaaaaatatgaaggctacacatgagttaatttaaaa 623  Q
    |||| |||||||| ||| |||| ||  |||| ||||||||||| | |||| | |||||||||||||||||||||    
T  13246972 ttctaataatattctaaacattgttgtaaaaattcattcaaaattttgaatgatacacatgagttaatttaaaa 13247045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000003; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 545 - 611
Target Start/End: Complemental strand, 8382011 - 8381946
Alignment:
Q  545 agagattcttataatattttaatcattcttaaaaaatttcattcaaaaatatgaaggctacacatga 611  Q
    |||||||||||||||||| ||| ||| ||| ||||| | |||||||||||||||||| |||||||||    
T  8382011 agagattcttataatattctaaacatacttgaaaaact-cattcaaaaatatgaagggtacacatga 8381946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 689 - 741
Target Start/End: Complemental strand, 28667082 - 28667030
Alignment:
Q  689 gactaaaacacaaaattgttatatttatatggactaaaatatatttaacccta 741  Q
    |||||||||| |||||||| ||||||||| |||  ||||||||||||||||||    
T  28667082 gactaaaacaaaaaattgtcatatttatagggaaaaaaatatatttaacccta 28667030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 544 - 611
Target Start/End: Original strand, 32722836 - 32722903
Alignment:
Q  544 aagagattcttataatattttaatcattcttaaaaaatttcattcaaaaatatgaaggctacacatga 611  Q
    |||||| ||| ||||||||||||  ||| ||  ||| ||||||||||||| |||||||||||||||||    
T  32722836 aagagagtctcataatattttaaatatttttggaaattttcattcaaaaagatgaaggctacacatga 32722903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 582 - 627
Target Start/End: Complemental strand, 6712557 - 6712512
Alignment:
Q  582 ttcattcaaaaatatgaaggctacacatgagttaatttaaaagcag 627  Q
    ||||||||||||| |||||  ||||||||| |||||||||||||||    
T  6712557 ttcattcaaaaatctgaagtatacacatgatttaatttaaaagcag 6712512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 544 - 624
Target Start/End: Complemental strand, 27978455 - 27978374
Alignment:
Q  544 aagagattcttataatattttaatcattcttaaaaaatttcattcaaaa-atatgaaggctacacatgagttaatttaaaag 624  Q
    ||||||||||||||||||| ||| ||||| |   ||||||| || |||  ||||||||||||||||||| || |||||||||    
T  27978455 aagagattcttataatattctaaacattcctgtgaaatttccttaaaatgatatgaaggctacacatgaattgatttaaaag 27978374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000003; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 556 - 650
Target Start/End: Original strand, 1468665 - 1468759
Alignment:
Q  556 taatattttaatcattcttaaaaaatttcattcaaaaatatgaaggctacacatgagttaatttaaaagcaggaagtaaaagtgataatgaaaaa 650  Q
    ||||||| ||| |||||||   |||||||||||||||||||||||  |||||  ||||||| ||||||| | | |||||||||| | ||||||||    
T  1468665 taatattctaaacattcttggcaaatttcattcaaaaatatgaagaatacacgagagttaacttaaaagtatggagtaaaagtggtgatgaaaaa 1468759  T

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Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 545 - 608
Target Start/End: Original strand, 32889820 - 32889884
Alignment:
Q  545 agagattcttataatattttaatca-ttcttaaaaaatttcattcaaaaatatgaaggctacaca 608  Q
    |||||||||||||||||||||| || |||| ||||||  |||||||||||||||| || ||||||    
T  32889820 agagattcttataatattttaaacatttctaaaaaaaaatcattcaaaaatatgatggttacaca 32889884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 599
Target Start/End: Complemental strand, 23214521 - 23214467
Alignment:
Q  545 agagattcttataatattttaatcattcttaaaaaatttcattcaaaaatatgaa 599  Q
    |||||||||||||||||||||| | || ||  ||||||| |||||||||||||||    
T  23214521 agagattcttataatattttaaacttttttgcaaaattttattcaaaaatatgaa 23214467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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