View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6021_low_21 (Length: 427)
Name: NF6021_low_21
Description: NF6021
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6021_low_21 |
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Alignment Details
Target: chr7 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 13 - 411
Target Start/End: Original strand, 29353088 - 29353497
Alignment:
| Q |
13 |
aatatactcaaacatgatgctgcctaactaatgtatgttggtacatattaataaaatagcttggagatggannnnnnn------------gtttggttt- |
99 |
Q |
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| T |
29353088 |
aatatactcaa-catgatgctgcctaactaatgtatgttggtacatattaataaaatagcttggagatggattttttttgtttggttttggtttggtttt |
29353186 |
T |
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| Q |
100 |
gttcatgcatttgactttgtagcctcaaacataagcatcgtgacagaagttcaaatttaatctaaaacacgacatttgtaaaatggtagttagatgtgcc |
199 |
Q |
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| T |
29353187 |
gttcatgcatttgactttgtaacctcaaacataagcatcgtgaca-aagttcaaatttcatctaaaagacgacatttgtaaaatggtggttagatgtgcc |
29353285 |
T |
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| Q |
200 |
attttaattaataataataatttctcttgtatcaaattttttaaaaaatatgttaggaggggattttacatttgacactcaagtgcatttctatatatta |
299 |
Q |
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| T |
29353286 |
attttaattaataataataatttctcttgtatcaaaatttttaaaaaatatattaggaggggattttacatttgacactcaagtgcatttctatatatta |
29353385 |
T |
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| Q |
300 |
atgtgatttttgcttatnnnnnnntggattaacctctcaactatgaatcaaaaaagtgagtcgacactagattttagcaaaaaattaatcaacattctta |
399 |
Q |
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| T |
29353386 |
atgtgatttttgcttataaaaaaatggattaacctctcaactatgaatcaaaaaagtgagtcgacactagattttagcaaaaaattaatcaacattcttg |
29353485 |
T |
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| Q |
400 |
gagacaaaaaat |
411 |
Q |
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| T |
29353486 |
gagacaaaaaat |
29353497 |
T |
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