View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6021_low_70 (Length: 280)

Name: NF6021_low_70
Description: NF6021
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6021_low_70
NF6021_low_70
[»] chr4 (77 HSPs)
chr4 (1-243)||(26186617-26186859)
chr4 (120-243)||(29584895-29585018)
chr4 (120-240)||(31840102-31840220)
chr4 (127-243)||(56373332-56373448)
chr4 (130-243)||(41920029-41920142)
chr4 (131-243)||(28116497-28116609)
chr4 (130-243)||(14602646-14602759)
chr4 (130-243)||(37625116-37625229)
chr4 (127-243)||(22750830-22750946)
chr4 (131-243)||(31486489-31486601)
chr4 (127-243)||(33246485-33246601)
chr4 (131-243)||(38136356-38136468)
chr4 (127-243)||(39237577-39237693)
chr4 (127-203)||(40411331-40411407)
chr4 (127-194)||(52226069-52226136)
chr4 (123-201)||(43509124-43509202)
chr4 (1-94)||(26169870-26169963)
chr4 (130-242)||(10541248-10541360)
chr4 (123-243)||(12624697-12624817)
chr4 (127-243)||(25477226-25477342)
chr4 (127-201)||(5932929-5933003)
chr4 (127-201)||(20116493-20116567)
chr4 (123-201)||(20185640-20185718)
chr4 (99-201)||(31937352-31937454)
chr4 (123-201)||(32236874-32236952)
chr4 (127-201)||(43800851-43800925)
chr4 (130-203)||(37175013-37175086)
chr4 (120-201)||(51787814-51787895)
chr4 (127-243)||(20262382-20262498)
chr4 (142-201)||(39197037-39197096)
chr4 (130-240)||(39414240-39414348)
chr4 (127-201)||(16070474-16070548)
chr4 (127-201)||(24072810-24072884)
chr4 (130-203)||(5416860-5416933)
chr4 (130-203)||(20291381-20291454)
chr4 (130-206)||(21171762-21171838)
chr4 (127-243)||(22651465-22651581)
chr4 (127-243)||(30153210-30153326)
chr4 (127-203)||(48472483-48472559)
chr4 (130-201)||(5448705-5448776)
chr4 (120-191)||(30049750-30049821)
chr4 (123-218)||(32107871-32107966)
chr4 (130-243)||(7002183-7002297)
chr4 (130-243)||(45079804-45079915)
chr4 (131-201)||(46729348-46729418)
chr4 (112-181)||(26170240-26170309)
chr4 (130-203)||(34543743-34543816)
chr4 (127-200)||(41459631-41459704)
chr4 (120-201)||(45628056-45628136)
chr4 (127-243)||(19654429-19654545)
chr4 (127-243)||(26203131-26203247)
chr4 (127-243)||(52198716-52198832)
chr4 (120-203)||(52676061-52676145)
chr4 (123-203)||(10602194-10602270)
chr4 (131-242)||(20791929-20792040)
chr4 (127-182)||(30866718-30866773)
chr4 (130-243)||(54701281-54701391)
chr4 (130-203)||(3684178-3684252)
chr4 (127-201)||(5168022-5168096)
chr4 (127-181)||(41945761-41945815)
chr4 (127-201)||(54438553-54438627)
chr4 (123-168)||(3113442-3113487)
chr4 (127-192)||(21121019-21121084)
chr4 (126-207)||(44812594-44812675)
chr4 (130-243)||(50782779-50782892)
chr4 (130-203)||(52768890-52768963)
chr4 (127-199)||(13096530-13096602)
chr4 (123-203)||(34643436-34643515)
chr4 (136-243)||(5536498-5536605)
chr4 (123-166)||(28175888-28175931)
chr4 (137-204)||(31552180-31552246)
chr4 (130-181)||(31917440-31917491)
chr4 (130-196)||(52552502-52552568)
chr4 (135-181)||(53484440-53484486)
chr4 (166-203)||(3094223-3094260)
chr4 (135-196)||(36513306-36513367)
chr4 (120-164)||(3094410-3094454)
[»] chr5 (54 HSPs)
chr5 (132-242)||(41521190-41521300)
chr5 (127-225)||(20946106-20946204)
chr5 (127-243)||(29866190-29866306)
chr5 (128-223)||(4745148-4745243)
chr5 (127-240)||(600769-600882)
chr5 (127-240)||(5845180-5845293)
chr5 (130-243)||(3559017-3559130)
chr5 (130-227)||(9375629-9375726)
chr5 (120-201)||(25017654-25017735)
chr5 (127-243)||(4738631-4738747)
chr5 (123-243)||(39690469-39690589)
chr5 (127-201)||(27798199-27798273)
chr5 (126-203)||(36177333-36177410)
chr5 (123-203)||(21912161-21912241)
chr5 (127-201)||(10523261-10523335)
chr5 (127-201)||(36750763-36750837)
chr5 (127-204)||(42644465-42644542)
chr5 (123-243)||(27642503-27642623)
chr5 (130-194)||(38972117-38972181)
chr5 (127-225)||(16102-16200)
chr5 (127-201)||(15898450-15898524)
chr5 (127-201)||(34877709-34877783)
chr5 (130-243)||(3247264-3247377)
chr5 (130-203)||(4857484-4857557)
chr5 (130-243)||(14044488-14044601)
chr5 (127-240)||(36347588-36347701)
chr5 (130-235)||(457780-457887)
chr5 (127-183)||(8717946-8718002)
chr5 (131-203)||(30348068-30348140)
chr5 (143-243)||(43060513-43060613)
chr5 (127-201)||(731939-732014)
chr5 (163-242)||(32067830-32067909)
chr5 (127-201)||(5151187-5151261)
chr5 (127-201)||(12895196-12895270)
chr5 (127-201)||(40979199-40979273)
chr5 (123-172)||(35568988-35569037)
chr5 (121-181)||(556064-556124)
chr5 (128-240)||(11980720-11980832)
chr5 (120-200)||(16496480-16496560)
chr5 (124-200)||(19089005-19089081)
chr5 (132-200)||(30317793-30317861)
chr5 (127-201)||(10934049-10934123)
chr5 (132-243)||(18729589-18729704)
chr5 (127-201)||(43454025-43454099)
chr5 (130-182)||(7736042-7736094)
chr5 (127-203)||(21574868-21574943)
chr5 (130-181)||(3529940-3529991)
chr5 (120-219)||(5764203-5764302)
chr5 (126-205)||(24781255-24781333)
chr5 (127-181)||(9946345-9946399)
chr5 (127-201)||(27587881-27587955)
chr5 (155-201)||(31642484-31642530)
chr5 (126-201)||(3631103-3631181)
chr5 (132-243)||(10656593-10656702)
[»] chr1 (75 HSPs)
chr1 (112-242)||(47754614-47754744)
chr1 (123-240)||(15457798-15457915)
chr1 (122-240)||(35365966-35366084)
chr1 (126-243)||(40261595-40261710)
chr1 (127-243)||(38680475-38680591)
chr1 (117-243)||(13723455-13723581)
chr1 (123-201)||(24415042-24415120)
chr1 (130-243)||(32152158-32152271)
chr1 (123-227)||(8984644-8984748)
chr1 (123-243)||(15512764-15512884)
chr1 (123-243)||(28948947-28949067)
chr1 (127-203)||(52141162-52141238)
chr1 (130-201)||(8877814-8877885)
chr1 (120-242)||(32144312-32144434)
chr1 (127-225)||(3072157-3072253)
chr1 (130-201)||(23982582-23982653)
chr1 (127-243)||(28723638-28723756)
chr1 (127-243)||(51390524-51390638)
chr1 (127-201)||(4817893-4817967)
chr1 (127-201)||(4829693-4829767)
chr1 (127-201)||(48721855-48721929)
chr1 (127-200)||(3143446-3143519)
chr1 (131-203)||(2342944-2343016)
chr1 (127-203)||(3831087-3831163)
chr1 (127-243)||(16582533-16582649)
chr1 (123-203)||(31305358-31305438)
chr1 (127-243)||(33231840-33231956)
chr1 (127-203)||(47070948-47071024)
chr1 (132-243)||(4813454-4813565)
chr1 (130-201)||(5085079-5085150)
chr1 (130-243)||(10842329-10842440)
chr1 (127-201)||(29140641-29140715)
chr1 (127-243)||(32047442-32047557)
chr1 (127-201)||(34102378-34102452)
chr1 (127-201)||(46591144-46591218)
chr1 (126-243)||(34696869-34696986)
chr1 (127-243)||(15179410-15179526)
chr1 (127-243)||(15911539-15911655)
chr1 (147-243)||(41737125-41737221)
chr1 (130-201)||(5852841-5852912)
chr1 (130-225)||(28679812-28679906)
chr1 (128-243)||(44395535-44395650)
chr1 (127-201)||(25063252-25063326)
chr1 (120-201)||(46495351-46495433)
chr1 (130-203)||(291625-291698)
chr1 (127-196)||(20564822-20564891)
chr1 (130-203)||(30336099-30336172)
chr1 (154-243)||(44163232-44163321)
chr1 (120-164)||(32715597-32715641)
chr1 (123-175)||(46732943-46732995)
chr1 (130-193)||(10160762-10160825)
chr1 (130-201)||(13145460-13145531)
chr1 (127-225)||(23393502-23393597)
chr1 (127-201)||(5322010-5322084)
chr1 (127-225)||(31807959-31808057)
chr1 (130-172)||(34331946-34331988)
chr1 (127-201)||(44652848-44652922)
chr1 (166-243)||(47133465-47133543)
chr1 (154-227)||(6282490-6282563)
chr1 (130-243)||(30898553-30898666)
chr1 (127-172)||(34012558-34012603)
chr1 (127-196)||(47643587-47643656)
chr1 (132-201)||(51996997-51997066)
chr1 (132-200)||(9675659-9675727)
chr1 (141-225)||(25258348-25258432)
chr1 (127-243)||(36084970-36085086)
chr1 (132-243)||(44335289-44335403)
chr1 (127-218)||(4081951-4082042)
chr1 (120-203)||(16395528-16395611)
chr1 (134-201)||(25269419-25269486)
chr1 (133-243)||(50692409-50692520)
chr1 (143-201)||(35001273-35001331)
chr1 (127-196)||(3143723-3143792)
chr1 (126-201)||(13352876-13352949)
chr1 (127-203)||(40702458-40702534)
[»] chr8 (60 HSPs)
chr8 (132-243)||(31746399-31746510)
chr8 (117-242)||(25888597-25888722)
chr8 (119-201)||(44255496-44255578)
chr8 (127-203)||(36309585-36309661)
chr8 (127-243)||(36437502-36437618)
chr8 (127-243)||(38202981-38203097)
chr8 (127-201)||(38761347-38761421)
chr8 (123-200)||(885505-885582)
chr8 (130-243)||(3113525-3113638)
chr8 (127-243)||(5191538-5191653)
chr8 (123-243)||(34882671-34882791)
chr8 (130-201)||(24512159-24512230)
chr8 (127-225)||(12762861-12762959)
chr8 (127-205)||(38770176-38770254)
chr8 (127-201)||(40517783-40517857)
chr8 (130-243)||(25198290-25198403)
chr8 (127-243)||(14577641-14577757)
chr8 (123-243)||(24962350-24962470)
chr8 (135-203)||(35794783-35794851)
chr8 (123-243)||(43980568-43980688)
chr8 (127-201)||(10396219-10396293)
chr8 (130-203)||(7172260-7172333)
chr8 (127-200)||(14846910-14846983)
chr8 (130-243)||(26878720-26878833)
chr8 (127-200)||(41087018-41087091)
chr8 (123-203)||(34157958-34158038)
chr8 (131-243)||(37141727-37141839)
chr8 (127-243)||(37956122-37956238)
chr8 (130-201)||(25185073-25185144)
chr8 (127-222)||(45203780-45203875)
chr8 (127-201)||(1769437-1769510)
chr8 (127-225)||(30262527-30262625)
chr8 (127-201)||(45183850-45183924)
chr8 (134-203)||(34869871-34869940)
chr8 (127-203)||(12998682-12998758)
chr8 (127-199)||(24276546-24276618)
chr8 (127-201)||(57177-57251)
chr8 (127-201)||(16002712-16002786)
chr8 (127-196)||(37600877-37600946)
chr8 (127-243)||(38773337-38773454)
chr8 (127-200)||(40790832-40790905)
chr8 (135-243)||(41541550-41541656)
chr8 (130-203)||(43191469-43191542)
chr8 (132-196)||(23399771-23399835)
chr8 (136-243)||(2562728-2562835)
chr8 (130-201)||(7772555-7772626)
chr8 (137-203)||(17933745-17933812)
chr8 (127-182)||(39543649-39543704)
chr8 (123-181)||(27628-27686)
chr8 (134-240)||(3006777-3006883)
chr8 (127-201)||(40337180-40337254)
chr8 (130-243)||(22590376-22590489)
chr8 (132-205)||(31673635-31673708)
chr8 (137-196)||(35709098-35709157)
chr8 (127-166)||(40808000-40808039)
chr8 (127-205)||(14739468-14739546)
chr8 (127-201)||(31252644-31252718)
chr8 (127-173)||(33385317-33385363)
chr8 (175-243)||(14522641-14522709)
chr8 (132-196)||(40602035-40602099)
[»] chr6 (34 HSPs)
chr6 (127-227)||(12514574-12514674)
chr6 (130-242)||(31536014-31536126)
chr6 (127-243)||(31945901-31946017)
chr6 (127-201)||(6791419-6791493)
chr6 (143-225)||(1514233-1514315)
chr6 (123-243)||(19838932-19839052)
chr6 (130-242)||(30465960-30466072)
chr6 (120-243)||(15981795-15981918)
chr6 (127-201)||(16327166-16327240)
chr6 (127-201)||(16350564-16350638)
chr6 (127-243)||(28238302-28238419)
chr6 (130-243)||(5084530-5084646)
chr6 (132-227)||(10669268-10669363)
chr6 (127-201)||(1763856-1763930)
chr6 (133-227)||(33607372-33607466)
chr6 (127-201)||(34513207-34513281)
chr6 (127-243)||(3887931-3888047)
chr6 (132-203)||(9428208-9428279)
chr6 (120-202)||(12514737-12514819)
chr6 (149-242)||(3729391-3729484)
chr6 (126-243)||(11302856-11302973)
chr6 (127-243)||(5895732-5895848)
chr6 (117-181)||(12503592-12503656)
chr6 (127-201)||(197440-197514)
chr6 (127-181)||(3729485-3729539)
chr6 (124-181)||(7595580-7595638)
chr6 (127-225)||(20522991-20523089)
chr6 (128-201)||(9461336-9461409)
chr6 (120-181)||(31152970-31153031)
chr6 (120-240)||(31780128-31780249)
chr6 (130-182)||(31487056-31487108)
chr6 (146-243)||(22410851-22410948)
chr6 (130-190)||(6418956-6419016)
chr6 (127-175)||(31039215-31039263)
[»] chr2 (68 HSPs)
chr2 (127-243)||(26512072-26512188)
chr2 (127-240)||(21012857-21012970)
chr2 (127-243)||(24774866-24774982)
chr2 (127-242)||(2131759-2131874)
chr2 (127-203)||(375333-375409)
chr2 (123-243)||(17663625-17663745)
chr2 (127-243)||(37355037-37355153)
chr2 (120-243)||(28264932-28265055)
chr2 (126-243)||(15851532-15851649)
chr2 (120-201)||(41665753-41665834)
chr2 (120-181)||(42250860-42250921)
chr2 (123-203)||(2521284-2521364)
chr2 (123-243)||(20361984-20362103)
chr2 (127-243)||(27297578-27297694)
chr2 (123-243)||(32677476-32677596)
chr2 (127-243)||(44424596-44424712)
chr2 (123-194)||(28733873-28733944)
chr2 (123-205)||(4758065-4758147)
chr2 (130-243)||(43709919-43710033)
chr2 (127-243)||(1246400-1246517)
chr2 (135-243)||(45150732-45150840)
chr2 (129-240)||(8383964-8384073)
chr2 (127-243)||(34330003-34330119)
chr2 (131-243)||(40346073-40346185)
chr2 (127-243)||(44421450-44421566)
chr2 (123-243)||(45214726-45214846)
chr2 (127-225)||(247679-247777)
chr2 (127-201)||(3237766-3237840)
chr2 (127-201)||(17250949-17251023)
chr2 (127-225)||(28190617-28190715)
chr2 (127-201)||(38982059-38982133)
chr2 (130-243)||(7278604-7278717)
chr2 (126-198)||(11121259-11121329)
chr2 (128-201)||(38449703-38449776)
chr2 (120-227)||(6275548-6275655)
chr2 (130-201)||(35241699-35241770)
chr2 (123-201)||(7255644-7255722)
chr2 (127-201)||(8065060-8065134)
chr2 (127-172)||(2048818-2048863)
chr2 (132-225)||(11071687-11071780)
chr2 (127-200)||(25731174-25731247)
chr2 (135-243)||(13477029-13477137)
chr2 (127-203)||(14527664-14527740)
chr2 (127-203)||(23464724-23464800)
chr2 (127-203)||(41865757-41865832)
chr2 (130-194)||(43119360-43119424)
chr2 (130-201)||(3326767-3326838)
chr2 (130-201)||(31644433-31644504)
chr2 (127-181)||(2917089-2917143)
chr2 (127-201)||(11459196-11459270)
chr2 (135-221)||(44101395-44101481)
chr2 (120-181)||(3389143-3389204)
chr2 (128-201)||(14420720-14420792)
chr2 (142-239)||(36174795-36174892)
chr2 (130-197)||(7257929-7257996)
chr2 (142-205)||(43638824-43638887)
chr2 (127-242)||(43650036-43650151)
chr2 (149-203)||(3337727-3337781)
chr2 (127-201)||(9718160-9718234)
chr2 (131-201)||(35178785-35178855)
chr2 (120-181)||(2654364-2654425)
chr2 (160-225)||(4398545-4398610)
chr2 (127-172)||(12498256-12498301)
chr2 (127-220)||(16808811-16808904)
chr2 (127-220)||(16848092-16848185)
chr2 (127-164)||(24490737-24490774)
chr2 (131-203)||(3645364-3645436)
chr2 (157-201)||(44274685-44274729)
[»] chr7 (47 HSPs)
chr7 (130-243)||(31373689-31373802)
chr7 (123-243)||(48193616-48193736)
chr7 (132-243)||(21752529-21752640)
chr7 (127-201)||(1324751-1324825)
chr7 (120-243)||(27162884-27163006)
chr7 (120-224)||(27170032-27170135)
chr7 (120-243)||(27213488-27213611)
chr7 (127-201)||(36116364-36116438)
chr7 (127-201)||(37673780-37673854)
chr7 (128-225)||(21392882-21392979)
chr7 (120-201)||(21801037-21801118)
chr7 (123-227)||(5334379-5334483)
chr7 (127-243)||(6376121-6376237)
chr7 (127-243)||(25750369-25750485)
chr7 (124-243)||(37491604-37491723)
chr7 (130-201)||(43465134-43465205)
chr7 (127-201)||(35128427-35128501)
chr7 (127-225)||(36726162-36726259)
chr7 (123-243)||(23876038-23876158)
chr7 (123-243)||(26632847-26632967)
chr7 (123-203)||(28663796-28663876)
chr7 (130-243)||(40740951-40741066)
chr7 (130-201)||(2276568-2276639)
chr7 (126-201)||(10685128-10685203)
chr7 (132-243)||(20123451-20123562)
chr7 (127-181)||(43601153-43601207)
chr7 (127-201)||(47458174-47458248)
chr7 (127-201)||(48610124-48610198)
chr7 (130-243)||(46783832-46783945)
chr7 (120-201)||(49100714-49100795)
chr7 (149-225)||(4068418-4068494)
chr7 (127-243)||(4089488-4089604)
chr7 (130-194)||(40263761-40263825)
chr7 (127-194)||(42983602-42983669)
chr7 (127-201)||(21809635-21809709)
chr7 (127-201)||(37048078-37048152)
chr7 (120-242)||(42993169-42993291)
chr7 (128-201)||(48767607-48767681)
chr7 (142-201)||(21388285-21388344)
chr7 (128-243)||(35960379-35960494)
chr7 (127-203)||(44648703-44648781)
chr7 (127-201)||(19236055-19236129)
chr7 (127-201)||(33181338-33181412)
chr7 (135-240)||(26200964-26201069)
chr7 (127-183)||(13907731-13907787)
chr7 (127-201)||(29636029-29636102)
chr7 (130-182)||(37136243-37136295)
[»] chr3 (65 HSPs)
chr3 (120-224)||(27047161-27047265)
chr3 (123-242)||(22659581-22659700)
chr3 (130-243)||(11388121-11388234)
chr3 (130-227)||(44083643-44083740)
chr3 (130-242)||(26043020-26043132)
chr3 (130-242)||(26121333-26121445)
chr3 (127-243)||(27638067-27638183)
chr3 (127-203)||(33287906-33287982)
chr3 (127-203)||(35055826-35055902)
chr3 (123-243)||(48903069-48903189)
chr3 (127-243)||(50363027-50363143)
chr3 (130-225)||(26243490-26243585)
chr3 (120-243)||(48901500-48901623)
chr3 (132-205)||(28243797-28243870)
chr3 (130-243)||(52325496-52325609)
chr3 (127-243)||(14645879-14645995)
chr3 (127-203)||(50524966-50525042)
chr3 (117-196)||(44338128-44338207)
chr3 (127-201)||(12077733-12077807)
chr3 (123-201)||(28477427-28477505)
chr3 (127-225)||(29611852-29611950)
chr3 (123-240)||(28228182-28228299)
chr3 (127-243)||(20945290-20945406)
chr3 (127-243)||(26517205-26517321)
chr3 (127-243)||(41727228-41727344)
chr3 (123-243)||(42010868-42010988)
chr3 (127-243)||(46048522-46048638)
chr3 (132-243)||(37729024-37729135)
chr3 (135-225)||(29645376-29645466)
chr3 (127-201)||(31819448-31819522)
chr3 (127-201)||(39617240-39617314)
chr3 (135-201)||(54425954-54426020)
chr3 (130-203)||(21932966-21933039)
chr3 (130-243)||(51263082-51263195)
chr3 (131-195)||(8818121-8818185)
chr3 (127-203)||(41543597-41543673)
chr3 (132-195)||(831355-831418)
chr3 (130-201)||(30476083-30476154)
chr3 (127-201)||(40645716-40645790)
chr3 (127-201)||(41308766-41308840)
chr3 (127-196)||(2421131-2421200)
chr3 (127-240)||(29676729-29676842)
chr3 (130-203)||(41739966-41740039)
chr3 (130-239)||(48309449-48309557)
chr3 (127-203)||(39931921-39931997)
chr3 (127-243)||(42891419-42891535)
chr3 (160-243)||(11393922-11394005)
chr3 (142-201)||(13084363-13084422)
chr3 (130-243)||(34055857-34055968)
chr3 (142-203)||(25750567-25750628)
chr3 (136-181)||(44647838-44647883)
chr3 (120-205)||(48581356-48581441)
chr3 (123-224)||(54555910-54556011)
chr3 (127-203)||(28229205-28229281)
chr3 (132-227)||(33411970-33412063)
chr3 (126-194)||(35145280-35145348)
chr3 (127-203)||(41825127-41825203)
chr3 (132-243)||(46435727-46435836)
chr3 (127-170)||(5504565-5504608)
chr3 (123-201)||(31474466-31474544)
chr3 (127-193)||(31826242-31826308)
chr3 (127-201)||(50092710-50092784)
chr3 (127-203)||(11344598-11344673)
chr3 (155-243)||(31650683-31650771)
chr3 (123-163)||(46202301-46202341)
[»] scaffold0005 (1 HSPs)
scaffold0005 (130-243)||(214619-214732)
[»] scaffold1091 (1 HSPs)
scaffold1091 (123-243)||(1897-2017)
[»] scaffold0013 (2 HSPs)
scaffold0013 (123-242)||(49138-49258)
scaffold0013 (142-201)||(61285-61344)
[»] scaffold0038 (1 HSPs)
scaffold0038 (127-243)||(38464-38581)
[»] scaffold0182 (1 HSPs)
scaffold0182 (142-238)||(18695-18791)
[»] scaffold0012 (1 HSPs)
scaffold0012 (127-203)||(99805-99881)
[»] scaffold0699 (1 HSPs)
scaffold0699 (127-181)||(7640-7694)
[»] scaffold0166 (1 HSPs)
scaffold0166 (126-205)||(23638-23716)


Alignment Details
Target: chr4 (Bit Score: 219; Significance: 1e-120; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 26186617 - 26186859
Alignment:
Q  1 taataaataggattgtgaaggtaaatagataattcattatgctggaaatagcaaagaggttctataaaatggacagaaaaatctcaaaagagttagtata 100  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26186617 taataaataggattgtgaaggtaaatagataattaattgtgctggaaatagcaaagaggttctataaaatggacagaaaaatctcaaaagagttagtata 26186716  T
Q  101 taattaagtatggaggtagtattaatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaa 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||    
T  26186717 taattaagtatggacgtagtattaatttgtcttgaaatataaaaagtcaaatttaatacacatacaaacaaatgacaatttgataatattaacacacaaa 26186816  T
Q  201 ataaatatcttaattgcactaacaattattattaagaaatgtg 243  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  26186817 ataaatatcttaattgcactaacaattattattaagaaatgtg 26186859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 120 - 243
Target Start/End: Complemental strand, 29585018 - 29584895
Alignment:
Q  120 tattaatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcac 219  Q
    |||||| ||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||  |||||||||||||| |||| | |  |||||| |||    
T  29585018 tattaacttgtcttaaaatataaaaagtcaaatttaatacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacac 29584919  T
Q  220 taacaattattattaagaaatgtg 243  Q
    |||||||| || ||||||||||||    
T  29584918 taacaatttttcttaagaaatgtg 29584895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 120 - 240
Target Start/End: Complemental strand, 31840220 - 31840102
Alignment:
Q  120 tattaatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcac 219  Q
    ||||||| ||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||  ||||||||||||||||  |||||  |||||| |||    
T  31840220 tattaatctgtcttgaaatataaaaagacaaatttaatacacatacaaacaaatgacaatttggtaatattaacacacaaa--aaatacattaattacac 31840123  T
Q  220 taacaattattattaagaaat 240  Q
    |||||||| || |||||||||    
T  31840122 taacaatttttcttaagaaat 31840102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 127 - 243
Target Start/End: Original strand, 56373332 - 56373448
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||||||||||||| ||||  ||||| ||||||||| | |||||||||||||||||  ||||||||||||||||||||| |  |||||||||||||||||    
T  56373332 ttgtcttgaaatatgaaaaaacaaatttaatacacagacaaacaaatgacaatttggtaatattaacacacaaaataaacacattaattgcactaacaat 56373431  T
Q  227 tattattaagaaatgtg 243  Q
    | || ||||||||||||    
T  56373432 ttttcttaagaaatgtg 56373448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 243
Target Start/End: Original strand, 41920029 - 41920142
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattat 229  Q
    ||||||||||| ||||||||||| || | |||||| ||||||| |||||||||  ||||||||||||||||||| | || |||||||||||||||| | |    
T  41920029 tcttgaaatatgaaaagtcaaatttatttcacatacaaacaaaagacaatttggtaatattaacacacaaaatagaaatattaattgcactaacaacttt 41920128  T
Q  230 tattaagaaatgtg 243  Q
    | ||||||||||||    
T  41920129 tcttaagaaatgtg 41920142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 131 - 243
Target Start/End: Original strand, 28116497 - 28116609
Alignment:
Q  131 cttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattatt 230  Q
    |||||||||| ||||||||||| ||||||||||| |||||||||| ||||||  ||||||||||||||||||| | || |||||| ||||||||| | ||    
T  28116497 cttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgataatttggcaatattaacacacaaaatagacatattaattacactaacaactttt 28116596  T
Q  231 attaagaaatgtg 243  Q
     |||| |||||||    
T  28116597 cttaaaaaatgtg 28116609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 130 - 243
Target Start/End: Original strand, 14602646 - 14602759
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattat 229  Q
    |||| |||||||||||||||||| ||||||||||| |||||||||||||||||  |||||||||||| ||| || | |  |||||| ||||||||| | |    
T  14602646 tcttaaaatataaaaagtcaaatttaatacacatacaaacaaatgacaatttggtaatattaacacaaaaactagacacattaattacactaacaacttt 14602745  T
Q  230 tattaagaaatgtg 243  Q
    | ||||||||||||    
T  14602746 tcttaagaaatgtg 14602759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 130 - 243
Target Start/End: Original strand, 37625116 - 37625229
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattat 229  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||| |||||   ||||||||||||||||||||| |  ||||||  ||| |||| | |    
T  37625116 tcttgaaatatgaaaagtcaaatttaatacacatataaacaaatgataatttagtaatattaacacacaaaataaacacattaattatactgacaacttt 37625215  T
Q  230 tattaagaaatgtg 243  Q
    | ||||||||||||    
T  37625216 tcttaagaaatgtg 37625229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 243
Target Start/End: Original strand, 22750830 - 22750946
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||  |||||||| |||||||| | |||  |||||| |||  ||||     
T  22750830 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttggtaatattaatacacaaaacagatacattaattacacagacaac 22750929  T
Q  227 tattattaagaaatgtg 243  Q
    | || ||||||||||||    
T  22750930 ttttcttaagaaatgtg 22750946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 243
Target Start/End: Complemental strand, 31486601 - 31486489
Alignment:
Q  131 cttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattatt 230  Q
    ||||||||||||||| |||||| |||||| |||||||||||| || |||||   ||||||||||||||||||| | |  |||||||||||||||| | ||    
T  31486601 cttgaaatataaaaaatcaaatttaatacgcatataaacaaaggataatttagtaatattaacacacaaaatagacacattaattgcactaacaactttt 31486502  T
Q  231 attaagaaatgtg 243  Q
     ||||||||||||    
T  31486501 cttaagaaatgtg 31486489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 243
Target Start/End: Original strand, 33246485 - 33246601
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    ||||||||||||||  |||||||||| ||||||||||| ||||||| || ||||||  ||||||||||||||||||| | || |||||| |||||||||     
T  33246485 ttgtcttgaaatatgtaaagtcaaatttaatacacatacaaacaaaggataatttggtaatattaacacacaaaatagacattttaattacactaacaac 33246584  T
Q  227 tattattaagaaatgtg 243  Q
    | || |||| |||||||    
T  33246585 ttttcttaaaaaatgtg 33246601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 243
Target Start/End: Complemental strand, 38136468 - 38136356
Alignment:
Q  131 cttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattatt 230  Q
    |||||||||| |||| ||||||  | |||||||| |||||||||||||||||| ||||||||||||||||||| | |  |||||| ||||||||| | ||    
T  38136468 cttgaaatatgaaaaatcaaattaattacacatacaaacaaatgacaatttgataatattaacacacaaaatagacacattaattacactaacaaatttt 38136369  T
Q  231 attaagaaatgtg 243  Q
     ||||||||||||    
T  38136368 cttaagaaatgtg 38136356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 243
Target Start/End: Original strand, 39237577 - 39237693
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||   ||||||||||||||||| | |||  |||||| |||| ||||     
T  39237577 ttgtcttgaaatataaaaagtcaaatttaatacacatacaaacaaaggacaatttcgtaatattaacacacaaaacagatacattaattacactgacaac 39237676  T
Q  227 tattattaagaaatgtg 243  Q
    | || |||| |||||||    
T  39237677 ttttcttaaaaaatgtg 39237693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 40411331 - 40411407
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    |||||||||||||| |||||| |||| ||||||||||| |||||||||||||||| | |||||||||||||||||||    
T  40411331 ttgtcttgaaatatgaaaagttaaatttaatacacatacaaacaaatgacaatttcataatattaacacacaaaata 40411407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 127 - 194
Target Start/End: Complemental strand, 52226136 - 52226069
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaaca 194  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||| ||||||||||    
T  52226136 ttgtcttgaaatatgaaaagtcaaatttaatacacatataaacaaaggacaatttgataatattaaca 52226069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 43509202 - 43509124
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||||| | |||||| |||| ||||||||||| ||||||| |||||||||| |||||||||||||||||    
T  43509202 taatttgtcttgaaatttgaaaagttaaatttaatacacatacaaacaaaagacaatttgataatattaacacacaaaa 43509124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 26169870 - 26169963
Alignment:
Q  1 taataaataggattgtgaaggtaaatagataattcattatgctggaaatagcaaagaggttctataaaatggacagaaaaatctcaaaagagtt 94  Q
    ||||||||| | || |||||||||||| |||||| ||| || ||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||    
T  26169870 taataaatatggttatgaaggtaaataaataattaattgtgttggaaatagaaaagaggttctataaaaaggatagaaaaatctcaaaatagtt 26169963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 130 - 242
Target Start/End: Original strand, 10541248 - 10541360
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattat 229  Q
    |||||| |||||||||||||||| |||||||||| |||||||| || ||||||  |||||||| |||||||||| |||  ||||||||| |||||| | |    
T  10541248 tcttgacatataaaaagtcaaatttaatacacatttaaacaaaggataatttggtaatattaatacacaaaatatatacattaattgcattaacaacttt 10541347  T
Q  230 tattaagaaatgt 242  Q
    | || ||||||||    
T  10541348 tctttagaaatgt 10541360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 243
Target Start/End: Complemental strand, 12624817 - 12624697
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaa 222  Q
    ||||||||||| ||||| |||||||||||| ||||||||||| ||||||| ||||||||   |||||||||||| ||||||   |  |||||| ||||||    
T  12624817 taatttgtcttaaaatacaaaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatattaacacataaaatagtcacattaattacactaa 12624718  T
Q  223 caattattattaagaaatgtg 243  Q
    ||| | || ||||||||||||    
T  12624717 caacttttcttaagaaatgtg 12624697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 25477342 - 25477226
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||   |||||||||||| |||| | | |  |||||| |||| ||||     
T  25477342 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaattttgtaatattaacacataaaacagacacattaattacactgacaac 25477243  T
Q  227 tattattaagaaatgtg 243  Q
    | || ||||||||||||    
T  25477242 ttttcttaagaaatgtg 25477226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 5933003 - 5932929
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||||||||||  ||||| | |||| ||||||||||| |||||||||||||||||| |||||||||||||||||    
T  5933003 ttgtcttgaaattaaaaaaattaaatttaatacacataaaaacaaatgacaatttgataatattaacacacaaaa 5932929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 20116567 - 20116493
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||| |||| |||||| ||||||||||| ||||||||||||||||   |||||||||||||||||    
T  20116567 ttgtcttgaaatatgaaaaatcaaatttaatacacatacaaacaaatgacaatttcctaatattaacacacaaaa 20116493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 20185640 - 20185718
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||||||| ||||||||||| ||||||| ||| ||||||| | |||||||  |||||||||||||||||    
T  20185640 taatttgtcttgaaatatgaaaagtcaaatttaatacaaatacaaacaaaaggcaatttggtaatattaacacacaaaa 20185718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 31937352 - 31937454
Alignment:
Q  99 tataattaagtatggaggtagtattaatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacaca 198  Q
    |||||||| | | |||||||||| ||| |  ||||||||||| ||||||||||| | ||| ||||| |||||||||||||||| | ||||||||||||||    
T  31937352 tataattagggacggaggtagtactaactaatcttgaaatatgaaaagtcaaattttatatacatacaaacaaatgacaatttaataatattaacacaca 31937451  T
Q  199 aaa 201  Q
    |||    
T  31937452 aaa 31937454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 32236952 - 32236874
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||| | ||||||||| ||||||||||| |||||||||||||||||||  | ||||||| |||||||||||||||||    
T  32236952 taatttatattgaaatatgaaaagtcaaatttaatacacatataaacaaagaataatttgataatattaacacacaaaa 32236874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 43800925 - 43800851
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||| |||||||||||  |||||||||| ||||||| |||||||||  |||||||||||||||||    
T  43800925 ttgtcttgaaatatgaaaagtcaaattaaatacacatacaaacaaaggacaatttggtaatattaacacacaaaa 43800851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 203
Target Start/End: Original strand, 37175013 - 37175086
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    ||||||||||| ||||||| ||| ||||||||||| ||||||| |||||||||  |||||||||||||||||||    
T  37175013 tcttgaaatatgaaaagtctaatttaatacacatacaaacaaaagacaatttggtaatattaacacacaaaata 37175086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 51787895 - 51787814
Alignment:
Q  120 tattaatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||| ||||||||| | ||||   |||||||||||||||||    
T  51787895 tattattttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgtctatttcgtaatattaacacacaaaa 51787814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 243
Target Start/End: Original strand, 20262382 - 20262498
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||| ||||||||| ||||||||||| ||||||||||| |||||||| |||||||   ||||||||||||||||| | | |  |||||| |||| ||||     
T  20262382 ttgttttgaaatatgaaaagtcaaatttaatacacatacaaacaaataacaatttcgtaatattaacacacaaaacagacacattaattacactgacaac 20262481  T
Q  227 tattattaagaaatgtg 243  Q
    | || ||||||||||||    
T  20262482 ttttcttaagaaatgtg 20262498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 142 - 201
Target Start/End: Original strand, 39197037 - 39197096
Alignment:
Q  142 aaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||||||||| ||||||||||| ||||||| |||||||||| |||||||||||||||||    
T  39197037 aaaagtcaaatttaatacacatacaaacaaaagacaatttgataatattaacacacaaaa 39197096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 39414348 - 39414240
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattat 229  Q
    ||||||||||| ||||||||||| |||  |||||| ||||||| || ||||||| ||||||||||||||||||| | || ||||||||| || ||| | |    
T  39414348 tcttgaaatatgaaaagtcaaatttaa--cacatacaaacaaaagataatttgataatattaacacacaaaatagacatattaattgcattatcaacttt 39414251  T
Q  230 tattaagaaat 240  Q
    | |||||||||    
T  39414250 tcttaagaaat 39414240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 16070548 - 16070474
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||| ||||||||| ||||||||||| ||||||| ||||||||||| || ||||||  |||||||||||||||||    
T  16070548 ttgtattgaaatatgaaaagtcaaatttaatacatatataaacaaaagataatttggtaatattaacacacaaaa 16070474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 24072884 - 24072810
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||| ||||||||||| ||||||||||  || ||||||||||||| | |||||||||||| ||||    
T  24072884 ttgtcttgaaatatgaaaagtcaaatttaatacacattcaagcaaatgacaatttcataatattaacacaaaaaa 24072810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 130 - 203
Target Start/End: Original strand, 5416860 - 5416933
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||  ||||||||  |||||||||| ||||||||    
T  5416860 tcttgaaatattaaaagtcaaatttaatacacatacaaacaaaacacaatttggtaatattaacaaacaaaata 5416933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 130 - 203
Target Start/End: Complemental strand, 20291454 - 20291381
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||||| |||||   ||||||||| |||||||||    
T  20291454 tcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgataatttagtaatattaacccacaaaata 20291381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 130 - 206
Target Start/End: Complemental strand, 21171838 - 21171762
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaat 206  Q
    |||||||||||  |||||||||| ||||||||||| ||| ||| || ||||||| ||||||||| ||||||||||||    
T  21171838 tcttgaaatatgtaaagtcaaatttaatacacatacaaataaaagataatttgataatattaacccacaaaataaat 21171762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 22651581 - 22651465
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    ||||||||||| |   |||||||||| ||||||||||| ||||||| |||||||||  |||||||||| |||||||||| |  |||||| || ||| ||     
T  22651581 ttgtcttgaaacacgtaaagtcaaatttaatacacatacaaacaaaagacaatttggtaatattaacatacaaaataaacacattaattacattaataaa 22651482  T
Q  227 tattattaagaaatgtg 243  Q
    | || ||||||||||||    
T  22651481 ttttcttaagaaatgtg 22651465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 243
Target Start/End: Original strand, 30153210 - 30153326
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||||||||||||| ||||||||||| ||||||||||| ||| ||| || ||||||  ||||||| ||||||||| | | |  |||||| |||| ||||     
T  30153210 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaataaaggataatttggtaatattatcacacaaaacagacacattaattacactgacaac 30153309  T
Q  227 tattattaagaaatgtg 243  Q
    | || ||||||||||||    
T  30153310 ttttcttaagaaatgtg 30153326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 48472483 - 48472559
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    |||||||||||||||||||||||||| | ||||||||| ||| ||| || |||||   |||||||||||||||||||    
T  48472483 ttgtcttgaaatataaaaagtcaaatttcatacacatacaaagaaaggataatttcgtaatattaacacacaaaata 48472559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 130 - 201
Target Start/End: Complemental strand, 5448776 - 5448705
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||||||||| ||||||||||| ||||||||||| ||||||| || |||||   |||||||||||||||||    
T  5448776 tcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggataatttcgtaatattaacacacaaaa 5448705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 191
Target Start/End: Complemental strand, 30049821 - 30049750
Alignment:
Q  120 tattaatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatatta 191  Q
    ||||||||||||||||||||| ||||||||| | |||||||||||  ||||||  ||||||||| |||||||    
T  30049821 tattaatttgtcttgaaatatgaaaagtcaactttaatacacatactaacaaagaacaatttgaaaatatta 30049750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 218
Target Start/End: Complemental strand, 32107966 - 32107871
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgca 218  Q
    |||||| |||| |||||| ||||||||||| ||||||| ||| ||| ||| |||||||||| |||||||| |||||||| | |||  |||||||||    
T  32107966 taatttatcttaaaatatgaaaagtcaaatttaatacatatacaaataaaagacaatttgataatattaatacacaaaacatatacattaattgca 32107871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 130 - 243
Target Start/End: Complemental strand, 7002297 - 7002183
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattat 229  Q
    ||||||||||| |||| |||||| ||| ||||||| ||||||| || ||||||  |||||||||||| |||||| | |  ||||||||| |||||||| |    
T  7002297 tcttgaaatatgaaaaatcaaatttaacacacatacaaacaaaggataatttggtaatattaacacataaaatataaacattaattgcattaacaatttt 7002198  T
Q  230 tatt-aagaaatgtg 243  Q
    | || ||||||||||    
T  7002197 tcttaaagaaatgtg 7002183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 130 - 243
Target Start/End: Original strand, 45079804 - 45079915
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattat 229  Q
    ||||||||||| ||||| ||||| |||||||  || ||| |||  | ||||||  ||||||||||||||||||| |||| |||||||||||||| | | |    
T  45079804 tcttgaaatatgaaaagccaaatttaataca--tagaaagaaagaataatttgctaatattaacacacaaaatagatatgttaattgcactaactacttt 45079901  T
Q  230 tattaagaaatgtg 243  Q
    | ||||||||||||    
T  45079902 tcttaagaaatgtg 45079915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 201
Target Start/End: Complemental strand, 46729418 - 46729348
Alignment:
Q  131 cttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||| ||||||||||| ||||||||||| ||||| | ||||||||   |||||||||||||||||    
T  46729418 cttgaaatatgaaaagtcaaatttaatacacatacaaacataggacaatttcgtaatattaacacacaaaa 46729348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 181
Target Start/End: Original strand, 26170240 - 26170309
Alignment:
Q  112 ggaggtagtattaatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaattt 181  Q
    ||||| |||||||| || ||||||||||| ||||||||||| ||||||| ||| ||| ||||||||||||    
T  26170240 ggagggagtattaacttatcttgaaatatgaaaagtcaaatttaatacatatacaaataaatgacaattt 26170309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 203
Target Start/End: Complemental strand, 34543816 - 34543743
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    ||||||||||| ||||||||||  ||||||||||| ||||||| ||  |||||  |||||||||||||||||||    
T  34543816 tcttgaaatatgaaaagtcaaaattaatacacatacaaacaaaggattatttggtaatattaacacacaaaata 34543743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 200
Target Start/End: Complemental strand, 41459704 - 41459631
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaa 200  Q
    ||||| |||||||| ||||||||||| ||||||||||||||| ||| ||||||||   ||||||||| ||||||    
T  41459704 ttgtcatgaaatatgaaaagtcaaatttaatacacatataaataaaagacaatttagtaatattaacgcacaaa 41459631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 45628056 - 45628136
Alignment:
Q  120 tattaatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||| |||||||||||||| ||||||||||| ||||||||||| ||| ||| | |||||||  |||||||| ||||||||    
T  45628056 tattaacttgtcttgaaatatgaaaagtcaaatttaatacacata-aaataaagggcaatttggtaatattaatacacaaaa 45628136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 19654545 - 19654429
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||| ||||||||| |||||  |||| ||||||||||| ||| |||||| ||||||  ||||| |||||| |||||| | |  |||||| |||||||| |    
T  19654545 ttgttttgaaatatgaaaagataaatttaatacacatacaaataaatgataatttggtaatatcaacacataaaatagacacattaattacactaacagt 19654446  T
Q  227 tattattaagaaatgtg 243  Q
    | || ||||||||||||    
T  19654445 ttttcttaagaaatgtg 19654429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 26203247 - 26203131
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||||||||||||  ||||||||||| ||||| ||||| ||| ||| ||||||||   |||||||||||| |||||| |||  |||||| || ||||||     
T  26203247 ttgtcttgaaatacgaaaagtcaaatttaatatacatacaaagaaaagacaattttgtaatattaacacataaaatatatacattaattacagtaacaac 26203148  T
Q  227 tattattaagaaatgtg 243  Q
    | || |||| |||||||    
T  26203147 ttttcttaataaatgtg 26203131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 243
Target Start/End: Original strand, 52198716 - 52198832
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||| |||||||||||||||||||||  |||||||||| ||| ||| || ||||||  |||||||| ||||| || | | || |||||| |||| ||||     
T  52198716 ttgttttgaaatataaaaagtcaaattcaatacacatacaaataaaagataatttggtaatattaatacacagaacagacatattaattacactgacaac 52198815  T
Q  227 tattattaagaaatgtg 243  Q
    | || ||||||||||||    
T  52198816 ttttcttaagaaatgtg 52198832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 203
Target Start/End: Complemental strand, 52676145 - 52676061
Alignment:
Q  120 tattaatttgtctt-gaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    |||||| ||||||| ||||| | ||||||||||| ||||||||||||||| ||| |||||||| | |||||||| ||| ||||||    
T  52676145 tattaacttgtctttgaaatttgaaaagtcaaatttaatacacatataaataaaggacaatttaataatattaatacaaaaaata 52676061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 203
Target Start/End: Original strand, 10602194 - 10602270
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    |||||||| ||||||||| ||||||||||| ||||||||    ||||||| ||||||||   |||||||||||||||||||    
T  10602194 taatttgttttgaaatatgaaaagtcaaatttaatacac----aaacaaaagacaatttagtaatattaacacacaaaata 10602270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 242
Target Start/End: Complemental strand, 20792040 - 20791929
Alignment:
Q  131 cttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattatt 230  Q
    |||||||||| |||| |||||| ||||||| ||| ||| ||| || ||||    ||||||||||||||||||| | || |||||||||||| ||| | ||    
T  20792040 cttgaaatatgaaaactcaaatttaatacatatacaaataaaagataattatgtaatattaacacacaaaatagacatattaattgcactaccaactttt 20791941  T
Q  231 attaagaaatgt 242  Q
     |||||||||||    
T  20791940 cttaagaaatgt 20791929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 30866773 - 30866718
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttg 182  Q
    ||||||||||| |||||||||||||  ||||||||||| |||||||| ||||||||    
T  30866773 ttgtcttgaaaaataaaaagtcaaaattaatacacatacaaacaaataacaatttg 30866718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 243
Target Start/End: Original strand, 54701281 - 54701391
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattat 229  Q
    ||||||||||| |||||| |||| ||||||||||| ||| |||||||||||||   ||| |||||||| ||| ||| || |||||| |||| |||| | |    
T  54701281 tcttgaaatatgaaaagttaaatttaatacacatacaaataaatgacaatttg---ataataacacactaaacaaacatattaattacactgacaacttt 54701377  T
Q  230 tattaagaaatgtg 243  Q
    | |||| |||||||    
T  54701378 tcttaaaaaatgtg 54701391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 203
Target Start/End: Original strand, 3684178 - 3684252
Alignment:
Q  130 tcttgaaatataaaaa-gtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    ||||||||||| |||| || |||| ||||| |||||||||||||||| ||||| | |||||||| ||||||||||    
T  3684178 tcttgaaatatgaaaacgttaaatttaatatacatataaacaaatgataatttaataatattaatacacaaaata 3684252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 5168096 - 5168022
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||| ||||||||| |||| | |||| ||||||||||| ||||||||||||||||   ||||||||| |||||||    
T  5168096 ttgtattgaaatatgaaaaattaaatttaatacacatacaaacaaatgacaatttagtaatattaacgcacaaaa 5168022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 41945761 - 41945815
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaattt 181  Q
    |||||||||||||| ||||||||||| ||||||| ||| ||||||| ||||||||    
T  41945761 ttgtcttgaaatatgaaaagtcaaatttaatacatatacaaacaaaggacaattt 41945815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 54438627 - 54438553
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||| ||||||||| ||||||||||| ||||||||||| ||| ||| || |||||   |||||||||||||||||    
T  54438627 ttgttttgaaatatgaaaagtcaaatttaatacacatacaaataaaggataatttcgtaatattaacacacaaaa 54438553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 168
Target Start/End: Complemental strand, 3113487 - 3113442
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaa 168  Q
    |||||||| ||||||||| ||||||||||| |||||||||||||||    
T  3113487 taatttgttttgaaatatgaaaagtcaaatttaatacacatataaa 3113442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 192
Target Start/End: Complemental strand, 21121084 - 21121019
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaa 192  Q
    ||||||| ||||||||||||| |||| |||||| |||| ||||||| |||| ||||| ||||||||    
T  21121084 ttgtcttaaaatataaaaagttaaatttaatacgcatacaaacaaaagacagtttgataatattaa 21121019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 44812594 - 44812675
Alignment:
Q  126 tttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaata 207  Q
    ||||| ||||||||| ||||||||||| ||||||||| | ||| ||||||||||||   |||||||||| | |||| |||||    
T  44812594 tttgttttgaaatatgaaaagtcaaatttaatacacacacaaataaatgacaattttgtaatattaacatataaaacaaata 44812675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 243
Target Start/End: Complemental strand, 50782892 - 50782779
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattat 229  Q
    |||||||||||||||| | |||  ||||||||||| ||||||| ||||||||   |||||||| |||||||| | | |  |||||| |||| |||| | |    
T  50782892 tcttgaaatataaaaaattaaagttaatacacatacaaacaaaggacaatttcgtaatattaagacacaaaacagacacattaattacactgacaacttt 50782793  T
Q  230 tattaagaaatgtg 243  Q
    | ||||||||||||    
T  50782792 tcttaagaaatgtg 50782779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 203
Target Start/End: Original strand, 52768890 - 52768963
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    ||||||||| |  |||||||||| ||||||||||| ||| ||||||||||||   |||||| ||||||||||||    
T  52768890 tcttgaaatctgtaaagtcaaatttaatacacatacaaataaatgacaattttgtaatattcacacacaaaata 52768963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 199
Target Start/End: Original strand, 13096530 - 13096602
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaa 199  Q
    ||||||| |||||| |||||| || | | || |||||| |||||||||||||||||  |||||||||||||||    
T  13096530 ttgtcttaaaatatgaaaagttaatttttatgcacatagaaacaaatgacaatttggtaatattaacacacaa 13096602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 203
Target Start/End: Complemental strand, 34643515 - 34643436
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    |||||| ||||||||||| |||| | |||| ||||||||||| ||||||| ||||||||   |||||||||| ||||||||    
T  34643515 taatttatcttgaaatatgaaaaattaaatttaatacacatacaaacaaa-gacaatttattaatattaacatacaaaata 34643436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 243
Target Start/End: Complemental strand, 5536605 - 5536498
Alignment:
Q  136 aatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattattattaa 235  Q
    ||||| |||| |||||| ||||||||||| |||||||||| |||||   | ||||||||| ||||| | | |  |||||| |||| |||||| || ||||    
T  5536605 aatatgaaaaatcaaatttaatacacatacaaacaaatgaaaatttcgtagtattaacacgcaaaacagacacattaattacactgacaatttttcttaa 5536506  T
Q  236 gaaatgtg 243  Q
    ||||||||    
T  5536505 gaaatgtg 5536498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 166
Target Start/End: Complemental strand, 28175931 - 28175888
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatata 166  Q
    |||||||| ||||||||||||||||||||| ||||||| |||||    
T  28175931 taatttgtattgaaatataaaaagtcaaatttaatacatatata 28175888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 204
Target Start/End: Complemental strand, 31552246 - 31552180
Alignment:
Q  137 atataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataa 204  Q
    ||||||||| |||||| ||||||||||||||| ||||||||||||   |||||||||| | |||||||    
T  31552246 atataaaaa-tcaaatttaatacacatataaataaatgacaatttagtaatattaacataaaaaataa 31552180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 130 - 181
Target Start/End: Complemental strand, 31917491 - 31917440
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaattt 181  Q
    |||| |||||||||||||||||| ||||||||||| |||||||  |||||||    
T  31917491 tcttaaaatataaaaagtcaaatttaatacacatacaaacaaaacacaattt 31917440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 196
Target Start/End: Original strand, 52552502 - 52552568
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacaca 196  Q
    ||||||||||| ||||||||||| | |||||| || ||||||| || ||||||  ||||||||||||    
T  52552502 tcttgaaatatgaaaagtcaaattttatacacgtacaaacaaaggataatttggtaatattaacaca 52552568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 53484440 - 53484486
Alignment:
Q  135 aaatataaaaagtcaaatctaatacacatataaacaaatgacaattt 181  Q
    ||||||||||| |||||| ||||||||||| |||| |||||||||||    
T  53484440 aaatataaaaaatcaaatataatacacataaaaacgaatgacaattt 53484486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 203
Target Start/End: Complemental strand, 3094260 - 3094223
Alignment:
Q  166 aaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    |||||||||||||||||  |||||||||||||||||||    
T  3094260 aaacaaatgacaatttggtaatattaacacacaaaata 3094223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 196
Target Start/End: Original strand, 36513306 - 36513367
Alignment:
Q  135 aaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacaca 196  Q
    |||||| |||| |||||| ||||||| ||| |||||||  ||||||||| ||||||||||||    
T  36513306 aaatatgaaaaatcaaatttaatacatatacaaacaaaaaacaatttgataatattaacaca 36513367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 3094454 - 3094410
Alignment:
Q  120 tattaatttgtcttgaaatataaaaagtcaaatctaatacacata 164  Q
    |||||| |||||||||||||| |||||| |||| |||||||||||    
T  3094454 tattaagttgtcttgaaatatgaaaagttaaatttaatacacata 3094410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 8e-30; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 132 - 242
Target Start/End: Complemental strand, 41521300 - 41521190
Alignment:
Q  132 ttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattatta 231  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||| | || |||||| ||||||||||| ||     
T  41521300 ttgaaatatgaaaagtcaaatttaatacacatataaacaaatgacaatttaataatattaacacacaaaatagacatattaatttcactaacaatttttc 41521201  T
Q  232 ttaagaaatgt 242  Q
    |||| ||||||    
T  41521200 ttaaaaaatgt 41521190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 20946204 - 20946106
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaa 225  Q
    |||| ||||||||| ||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| | |  ||||||||||||||||    
T  20946204 ttgttttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttgataatattaacacacaaaatagacacgttaattgcactaacaa 20946106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 29866306 - 29866190
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||||| ||||| |||  ||||||||||||||||| | | || ||||||||||||||||     
T  29866306 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaacttggtaatattaacacacaaaaaagacatattaattgcactaacaac 29866207  T
Q  227 tattattaagaaatgtg 243  Q
    | || ||||||||||||    
T  29866206 ttttcttaagaaatgtg 29866190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 128 - 223
Target Start/End: Complemental strand, 4745243 - 4745148
Alignment:
Q  128 tgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaac 223  Q
    |||||| |||||||||||||||||| ||||||||||| |||||||||||||||||  ||||||||| ||||||||||| |  ||||||||||||||    
T  4745243 tgtcttaaaatataaaaagtcaaatttaatacacatacaaacaaatgacaatttggtaatattaacccacaaaataaacacattaattgcactaac 4745148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 127 - 240
Target Start/End: Complemental strand, 600882 - 600769
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    ||||||| ||||||||||| |||||| ||||||| ||| |||||||||||||||||| |||||||||||||| |||| | |  ||||||||||||||||     
T  600882 ttgtcttaaaatataaaaaatcaaatttaatacatatacaaacaaatgacaatttgataatattaacacacataatagacacattaattgcactaacaag 600783  T
Q  227 tattattaagaaat 240  Q
    | || |||||||||    
T  600782 ttttcttaagaaat 600769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 127 - 240
Target Start/End: Complemental strand, 5845293 - 5845180
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||| ||||||||| ||||||||||| ||||||||||| |||||||||||||||||| |||||||| |||||||| |||||  |||||| |||| ||||     
T  5845293 ttgtattgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttgataatattaatacacaaaacaaatacattaattacactgacaac 5845194  T
Q  227 tattattaagaaat 240  Q
     ||| |||||||||    
T  5845193 aattcttaagaaat 5845180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 130 - 243
Target Start/End: Original strand, 3559017 - 3559130
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattat 229  Q
    ||||||||||| ||||||||||| ||||||||||| ||||||| |||||||||  ||||||||||||||||||| | |  ||||||  || ||||||| |    
T  3559017 tcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttggtaatattaacacacaaaatagacacattaattataccaacaatttt 3559116  T
Q  230 tattaagaaatgtg 243  Q
    | ||||||||||||    
T  3559117 tcttaagaaatgtg 3559130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 130 - 227
Target Start/End: Original strand, 9375629 - 9375726
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaatt 227  Q
    ||||||||||| |||| |||||| ||||| ||||| ||||||| |||||||||  ||||||| |||||||||||||||| ||||||||||||| ||||    
T  9375629 tcttgaaatatgaaaaatcaaatttaataaacatacaaacaaaagacaatttggtaatattagcacacaaaataaatatattaattgcactaataatt 9375726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 25017654 - 25017735
Alignment:
Q  120 tattaatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||| ||||||| |||||| ||||||||||| ||||||||||| |||||||||||||||||  |||||||||||||||||    
T  25017654 tattaacttgtcttaaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttggtaatattaacacacaaaa 25017735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 4738747 - 4738631
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||||| | ||||||   ||||||||||||||||| |||||  |||||| |||| |||||    
T  4738747 ttgtcttgaaatatgaaaagtcaaatttaatacacataaaaacaaaggtcaatttagtaatattaacacacaaaacaaatacattaattacactgacaat 4738648  T
Q  227 tattattaagaaatgtg 243  Q
      || ||||||||||||    
T  4738647 atttcttaagaaatgtg 4738631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 243
Target Start/End: Original strand, 39690469 - 39690589
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaa 222  Q
    ||||||||||||||||| |||||||||||| ||||||||||| ||||||| ||||||||   |||||||||||| |||||| | |  |||| | ||||||    
T  39690469 taatttgtcttgaaatacaaaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatattaacacataaaatagacacattaactacactaa 39690568  T
Q  223 caattattattaagaaatgtg 243  Q
    ||| | || ||||||||||||    
T  39690569 caacttttcttaagaaatgtg 39690589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 27798273 - 27798199
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||| ||||||||||  ||||||||||| |||||||||| ||||||| |||||||||||||||||    
T  27798273 ttgtcttgaaatatgaaaagtcaaacttaatacacatacaaacaaatgataatttgataatattaacacacaaaa 27798199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 126 - 203
Target Start/End: Complemental strand, 36177410 - 36177333
Alignment:
Q  126 tttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    ||||| ||||||||| ||||||||||| ||||||||||| ||||||||||||||||   |||||||||||||||||||    
T  36177410 tttgttttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaattttgtaatattaacacacaaaata 36177333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 203
Target Start/End: Complemental strand, 21912241 - 21912161
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    ||||||||||||||||| |||||||||||  ||||||||||| ||||||| |||||||| | |||||||||||| ||||||    
T  21912241 taatttgtcttgaaatacaaaaagtcaaacttaatacacatacaaacaaaagacaatttaataatattaacacataaaata 21912161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 10523261 - 10523335
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||||||||||||||| |||||||| ||||||||||| |||||||  ||||||||  |||||||||||||||||    
T  10523261 ttgtcttgaaatataaatagtcaaatttaatacacataaaaacaaaaaacaatttggtaatattaacacacaaaa 10523335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 36750763 - 36750837
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||| |||| | | | |||||||||||||||||    
T  36750763 ttgttttgaaatataaaaagtcaaatttaatacacatataaacaaaggacagtctaataatattaacacacaaaa 36750837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 42644465 - 42644542
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataa 204  Q
    |||||||||||||| ||||| ||||| ||||| ||||| |||||||||||||||||| ||||||| || |||||||||    
T  42644465 ttgtcttgaaatatgaaaagacaaatttaatatacatacaaacaaatgacaatttgataatattagcatacaaaataa 42644542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 243
Target Start/End: Complemental strand, 27642623 - 27642503
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaa 222  Q
    |||||| |||||||||| |||||||||||| ||||||||||| ||||||| || |||||   |||||||||||| |||||| | |  |||| | ||||||    
T  27642623 taatttatcttgaaatacaaaaagtcaaatttaatacacatacaaacaaaggataatttagtaatattaacacataaaatagacacattaactacactaa 27642524  T
Q  223 caattattattaagaaatgtg 243  Q
    ||| | || ||||||||||||    
T  27642523 caacttttcttaagaaatgtg 27642503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 194
Target Start/End: Original strand, 38972117 - 38972181
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaaca 194  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||  ||||||||||    
T  38972117 tcttgaaatataaaaagtcaaatttaatacacatacaaacaaaggacaatttggtaatattaaca 38972181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 16102 - 16200
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaa 225  Q
    |||||||||||| | ||||||||||| ||||||| ||| ||||||| ||||||||   |||||| ||||| |||||| |||  ||||||||||||||||    
T  16102 ttgtcttgaaatgtgaaaagtcaaatttaatacaaatacaaacaaaggacaatttagtaatattcacacaaaaaatagatacattaattgcactaacaa 16200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 15898450 - 15898524
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||| | ||| | ||||| ||||||||||| ||||||| |||||||||| |||||||||||||||||    
T  15898450 ttgtcttgaaatttgaaaggccaaatttaatacacatacaaacaaaggacaatttgataatattaacacacaaaa 15898524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 34877783 - 34877709
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||||||||| || ||||||||||| ||||||||| | |||||||||| ||||||  |||||||||||||||||    
T  34877783 ttgtcttgaaaaatgaaaagtcaaatttaatacacacacaaacaaatgataatttggtaatattaacacacaaaa 34877709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 130 - 243
Target Start/End: Original strand, 3247264 - 3247377
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattat 229  Q
    ||||||||||| ||||||||||| ||||||||||| ||||||| ||||||||   |||||||||| |||||| | | || |||||| ||||  ||| | |    
T  3247264 tcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttcgtaatattaacatacaaaacagacatattaattacactgtcaacttt 3247363  T
Q  230 tattaagaaatgtg 243  Q
    | ||||||||||||    
T  3247364 tcttaagaaatgtg 3247377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 130 - 203
Target Start/End: Original strand, 4857484 - 4857557
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    |||| |||||| ||||||||||| ||||||||||| ||||||||||||||||   |||||||||||| ||||||    
T  4857484 tcttaaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttagtaatattaacacataaaata 4857557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 130 - 243
Target Start/End: Original strand, 14044488 - 14044601
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattat 229  Q
    |||| |||||| ||||||||||| ||| ||||||| ||| |||||| ||||||| |||||||| ||| |||||| | || |||| |||| |||||| | |    
T  14044488 tcttcaaatatgaaaagtcaaatttaacacacataaaaataaatgataatttgataatattaatacataaaatagacatattaactgcattaacaacttt 14044587  T
Q  230 tattaagaaatgtg 243  Q
    | ||||||||||||    
T  14044588 tcttaagaaatgtg 14044601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 240
Target Start/End: Original strand, 36347588 - 36347701
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||||||||||| | || |||||||| ||||||||||| |||||||   |||||||| |||||||| |||||||| | |||  |||||| |||| ||||     
T  36347588 ttgtcttgaaatgtgaatagtcaaatttaatacacatacaaacaaaaatcaatttgataatattaatacacaaaacagatacattaattacactgacaac 36347687  T
Q  227 tattattaagaaat 240  Q
    | ||||||||||||    
T  36347688 ttttattaagaaat 36347701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 130 - 235
Target Start/End: Complemental strand, 457887 - 457780
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacaca--tataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaatt 227  Q
    |||| |||||| ||| ||||||| |||||||||  ||||||||||||||||||| | |||||| | |||||||||| |||  ||||||| |||||||| |    
T  457887 tcttaaaatatgaaatgtcaaatttaatacacacatataaacaaatgacaatttaataatattcagacacaaaatagatacattaattgtactaacaact 457788  T
Q  228 attattaa 235  Q
     |||||||    
T  457787 tttattaa 457780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 8717946 - 8718002
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttga 183  Q
    |||||||||||||| ||||||||||| ||||||| ||| ||||||||||||||||||    
T  8717946 ttgtcttgaaatatgaaaagtcaaatttaatacatatacaaacaaatgacaatttga 8718002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 203
Target Start/End: Original strand, 30348068 - 30348140
Alignment:
Q  131 cttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    |||||||||| ||||||||||| ||||||||| | ||||||| || ||||||  |||||||||||||||||||    
T  30348068 cttgaaatatgaaaagtcaaatttaatacacacacaaacaaaggaaaatttggtaatattaacacacaaaata 30348140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 143 - 243
Target Start/End: Original strand, 43060513 - 43060613
Alignment:
Q  143 aaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattattattaagaaatgt 242  Q
    |||||||||| ||||||||||| ||||||| || ||| ||  ||||||||||||||||||| | |  |||||| ||||||||| | ||||||| ||||||    
T  43060513 aaagtcaaatttaatacacatacaaacaaaagataatatggtaatattaacacacaaaatagacacattaattacactaacaacttttattaaaaaatgt 43060612  T
Q  243 g 243  Q
    |    
T  43060613 g 43060613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 731939 - 732014
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatg-acaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||| ||||  ||||| ||||||||||| ||||||| | ||||||||| |||||||||||||||||    
T  731939 ttgtcttgaaatatgaaaaaacaaatttaatacacatacaaacaaaagaacaatttgataatattaacacacaaaa 732014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 242
Target Start/End: Complemental strand, 32067909 - 32067830
Alignment:
Q  163 tataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattattattaagaaatgt 242  Q
    ||||||||||||||||||||  ||||||||||||||||||| | |  | |||||||||||| ||| || |||||||||||    
T  32067909 tataaacaaatgacaatttggtaatattaacacacaaaatagacacatgaattgcactaactatttttcttaagaaatgt 32067830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 5151187 - 5151261
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||| ||||||||||| ||||||||| | ||| ||| |||||||||  |||||||| ||||||||    
T  5151187 ttgtcttgaaatatgaaaagtcaaatttaatacacacacaaataaaggacaatttggtaatattaatacacaaaa 5151261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 12895196 - 12895270
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||||| |||| |||||| |||||| ||||||||||| ||||||| |||||||||  |||||||| ||||||||    
T  12895196 ttgtcttaaaatttaaaaaatcaaatttaatacacatacaaacaaaagacaatttggtaatattaatacacaaaa 12895270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 40979199 - 40979273
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||||| |||||| ||||||||||| ||||||||||| ||||||| ||||||||   |||||||| ||||||||    
T  40979199 ttgtctttaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttcgtaatattaatacacaaaa 40979273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 172
Target Start/End: Original strand, 35568988 - 35569037
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaa 172  Q
    |||||||||||||||||| ||||||||||| ||||||||||| |||||||    
T  35568988 taatttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaa 35569037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 556124 - 556064
Alignment:
Q  121 attaatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaattt 181  Q
    |||||||||||||||||||| ||||||||||| ||||||| ||| | | ||||||||||||    
T  556124 attaatttgtcttgaaatatgaaaagtcaaatttaatacatatacagaaaaatgacaattt 556064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 240
Target Start/End: Complemental strand, 11980832 - 11980720
Alignment:
Q  128 tgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaatt 227  Q
    |||||| |||||| ||||||||||| |||||||||||||||||   || ||| |   ||||||||||||||||||| | |  |||||| ||||||||| |    
T  11980832 tgtcttaaaatatgaaaagtcaaatttaatacacatataaacagtggataatatagtaatattaacacacaaaatagacacattaattacactaacaact 11980733  T
Q  228 attattaagaaat 240  Q
     ||||||| ||||    
T  11980732 tttattaaaaaat 11980720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 16496560 - 16496480
Alignment:
Q  120 tattaatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaa 200  Q
    |||||| || ||||||||||| ||||||||||| ||||| ||||| ||||||| || ||||||  |||||||| |||||||    
T  16496560 tattaacttatcttgaaatatgaaaagtcaaatttaatatacatacaaacaaaggataatttggtaatattaatacacaaa 16496480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 200
Target Start/End: Original strand, 19089005 - 19089081
Alignment:
Q  124 aatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaa 200  Q
    ||||||| || |||||| ||||||||||| ||||||| ||| ||||||||||||||||   |||||||| |||||||    
T  19089005 aatttgttttaaaatatgaaaagtcaaatttaatacaaatacaaacaaatgacaatttagtaatattaatacacaaa 19089081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 200
Target Start/End: Complemental strand, 30317861 - 30317793
Alignment:
Q  132 ttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaa 200  Q
    ||||||||| ||||||||||| ||||||||| | ||||||| || ||||||  ||||||||||||||||    
T  30317861 ttgaaatatgaaaagtcaaatttaatacacacacaaacaaaggaaaatttggtaatattaacacacaaa 30317793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 10934123 - 10934049
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||| ||||||||| ||||||||||| ||||||||||| |||||||  | ||||||  |||||||||| ||||||    
T  10934123 ttgtattgaaatatgaaaagtcaaatttaatacacatacaaacaaagaataatttggtaatattaacatacaaaa 10934049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 243
Target Start/End: Complemental strand, 18729704 - 18729589
Alignment:
Q  132 ttgaaatataaaaagtcaaatctaatacacatataaacaaa----tgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaatt 227  Q
    ||||||||| ||||||||||| ||||||||||| |||||||    ||| | ||| | ||||||||||||||||||| | |  |||||| ||| || ||||    
T  18729704 ttgaaatatgaaaagtcaaatttaatacacatacaaacaaacaaatgatactttaataatattaacacacaaaatagacacattaattacacaaataatt 18729605  T
Q  228 attattaagaaatgtg 243  Q
     || ||||||||||||    
T  18729604 tttcttaagaaatgtg 18729589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 43454099 - 43454025
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||| | |||| |||||| ||||||||||| ||||||| || | ||||| |||||||||| ||||||    
T  43454099 ttgtcttgaaatttgaaaaatcaaatttaatacacatacaaacaaaagatagtttgataatattaacatacaaaa 43454025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 7736094 - 7736042
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttg 182  Q
    ||||||||||| ||||||||||| ||| ||||||| |||||||||| ||||||    
T  7736094 tcttgaaatatgaaaagtcaaatttaacacacatacaaacaaatgataatttg 7736042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 21574868 - 21574943
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    ||||||||||| || ||||| ||||| |||||||| || ||||||| |||||||||  |||||||||| ||||||||    
T  21574868 ttgtcttgaaacatgaaaagacaaatttaatacac-tacaaacaaaggacaatttggtaatattaacatacaaaata 21574943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 130 - 181
Target Start/End: Complemental strand, 3529991 - 3529940
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaattt 181  Q
    |||| ||||||||| |||||||| |||||||||||||||||||  |||||||    
T  3529991 tcttaaaatataaatagtcaaatttaatacacatataaacaaagaacaattt 3529940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 219
Target Start/End: Original strand, 5764203 - 5764302
Alignment:
Q  120 tattaatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcac 219  Q
    |||||| ||||| |||||||| |||||| |||| ||||||  || |||||||| || |||||   ||| ||||||||||||||| | || ||||||||||    
T  5764203 tattaacttgtcgtgaaatatgaaaagttaaatttaatacttatgtaaacaaaggataatttagtaatgttaacacacaaaatagacatgttaattgcac 5764302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 205
Target Start/End: Original strand, 24781255 - 24781333
Alignment:
Q  126 tttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaa 205  Q
    |||||||| |||| | |||| |||||| ||||||||||| ||| |||  ||||||||| |||||||||| ||||||||||    
T  24781255 tttgtcttcaaatgtgaaaaatcaaatttaatacacatacaaa-aaagaacaatttgataatattaacatacaaaataaa 24781333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 9946345 - 9946399
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaattt 181  Q
    |||||||||||||||||||||| ||| |||||||| || ||||||| || |||||    
T  9946345 ttgtcttgaaatataaaaagtcgaatttaatacacgtacaaacaaaggataattt 9946399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 27587955 - 27587881
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||| ||||||| | |||| |||||| ||||||||||| | ||||| ||||||||   |||||||||||||||||    
T  27587955 ttgtattgaaatttgaaaaatcaaatttaatacacatacatacaaaggacaatttagtaatattaacacacaaaa 27587881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 31642484 - 31642530
Alignment:
Q  155 aatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||||||| |||| ||||  |||||||||||||||||    
T  31642484 aatacacatataaacaaaagacagtttggtaatattaacacacaaaa 31642530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 201
Target Start/End: Original strand, 3631103 - 3631181
Alignment:
Q  126 tttgtcttgaaatataa---aaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||||||||||||| |   |||||||||| ||||||||||| ||||||| | |||||    |||||||||||||||||    
T  3631103 tttgtcttgaaatattatgaaaagtcaaatttaatacacatacaaacaaaggtcaattgcgtaatattaacacacaaaa 3631181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 243
Target Start/End: Complemental strand, 10656702 - 10656593
Alignment:
Q  132 ttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattatta 231  Q
    ||||||||| ||||||||||| ||| ||  ||| ||| ||| || ||||||  ||| |||||||| |||||| | ||  |||||||| |||||||| ||     
T  10656702 ttgaaatatgaaaagtcaaatttaacaccaatacaaaaaaaagataatttggtaattttaacacataaaatacacat--taattgcattaacaatttttc 10656605  T
Q  232 ttaagaaatgtg 243  Q
    ||||||||||||    
T  10656604 ttaagaaatgtg 10656593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 8e-30; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 47754614 - 47754744
Alignment:
Q  112 ggaggtagtattaatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatctt 211  Q
    |||||||||| ||| || | ||||||||| ||||||||||| ||||||||||| |||||||||||||||||  |||||||||||| |||||| | |  ||    
T  47754614 ggaggtagtactaacttattttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttggtaatattaacacaaaaaatagacacatt 47754713  T
Q  212 aattgcactaacaattattattaagaaatgt 242  Q
    |||||||||||||||| || |||||||||||    
T  47754714 aattgcactaacaattttttttaagaaatgt 47754744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 123 - 240
Target Start/End: Original strand, 15457798 - 15457915
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaa 222  Q
    ||||||||  |||||||| |||| |||||| ||||||||||| |||||||||||||||||| ||||||| |||||||||||||||| |||| || |||||    
T  15457798 taatttgttctgaaatatgaaaaatcaaatttaatacacatacaaacaaatgacaatttgataatattatcacacaaaataaatatattaactgtactaa 15457897  T
Q  223 caattattattaagaaat 240  Q
    ||| | || |||||||||    
T  15457898 caactttttttaagaaat 15457915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 35365966 - 35366084
Alignment:
Q  122 ttaatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcacta 221  Q
    |||| ||||||| |||||| ||||||||||| ||||||||||| ||||||| |||||||||| ||||||||||||||||||| |||  ||| || |||||    
T  35365966 ttaacttgtcttaaaatatgaaaagtcaaatttaatacacatacaaacaaaagacaatttgataatattaacacacaaaatagatacattacttacacta 35366065  T
Q  222 acaattattattaagaaat 240  Q
    |||| | ||| ||||||||    
T  35366066 acaacttttagtaagaaat 35366084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 126 - 243
Target Start/End: Complemental strand, 40261710 - 40261595
Alignment:
Q  126 tttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaa 225  Q
    ||||||||||||||||||||||||||| |||||||  |||||||||| | |||||||| ||||||||||||||||||||| |  |||||||||||||| |    
T  40261710 tttgtcttgaaatataaaaagtcaaatttaataca--tataaacaaagggcaatttgataatattaacacacaaaataaacacattaattgcactaacta 40261613  T
Q  226 ttattattaagaaatgtg 243  Q
     | ||  |||||||||||    
T  40261612 cttttcataagaaatgtg 40261595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 38680591 - 38680475
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||| |||||||||  |||| ||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| | |  |||||| |||||||||     
T  38680591 ttgttttgaaatatgcaaagacaaatttaatacacatacaaacaaatgacaatttgataatattaacacacaaaatagacacattaattacactaacaac 38680492  T
Q  227 tattattaagaaatgtg 243  Q
    | || ||||||||||||    
T  38680491 ttttcttaagaaatgtg 38680475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 243
Target Start/End: Original strand, 13723455 - 13723581
Alignment:
Q  117 tagtattaatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattg 216  Q
    ||||| ||| || ||||||||||| ||||||||||| ||||||||||| ||||||| || ||||||  |||||||| |||||||||| | |  |||||||    
T  13723455 tagtactaacttatcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggataatttggtaatattaatacacaaaatagacacattaattg 13723554  T
Q  217 cactaacaattattattaagaaatgtg 243  Q
    ||||||||| | || ||||||||||||    
T  13723555 cactaacaacttttcttaagaaatgtg 13723581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 24415120 - 24415042
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||||||| ||||||||||| ||||||||||| |||||||||| ||||||  |||||||||||||||||    
T  24415120 taatttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgataatttggtaatattaacacacaaaa 24415042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 130 - 243
Target Start/End: Complemental strand, 32152271 - 32152158
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattat 229  Q
    |||| |||||| ||||||||||| ||||||||||| |||||||| ||||||||  ||||||||||||||||||| | |  |||||||||| ||||| | |    
T  32152271 tcttaaaatatgaaaagtcaaatttaatacacatacaaacaaataacaatttggtaatattaacacacaaaatagacacattaattgcaccaacaacttt 32152172  T
Q  230 tattaagaaatgtg 243  Q
    | ||||||||||||    
T  32152171 tcttaagaaatgtg 32152158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 227
Target Start/End: Original strand, 8984644 - 8984748
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaa 222  Q
    |||||| ||||||||||| ||||||||||| ||||||||||| ||||||||||||||||   ||||||||||||||||| | | |  |||||| ||||||    
T  8984644 taatttatcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttagtaatattaacacacaaaacagacacattaattacactaa 8984743  T
Q  223 caatt 227  Q
    |||||    
T  8984744 caatt 8984748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 243
Target Start/End: Original strand, 15512764 - 15512884
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaa 222  Q
    ||||||||||||||||| |||||||||||| ||||||||||| ||||||| ||||||||   |||||||||||| |||||| | |  |||| | ||||||    
T  15512764 taatttgtcttgaaatacaaaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatattaacacataaaatagacacattaactacactaa 15512863  T
Q  223 caattattattaagaaatgtg 243  Q
    ||| | || ||||||||||||    
T  15512864 caacttttcttaagaaatgtg 15512884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 243
Target Start/End: Original strand, 28948947 - 28949067
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaa 222  Q
    ||||||||||||||||| |||||||||||| ||||||||||| ||||||| ||||||||   |||||||||||| |||||| | |  |||| | ||||||    
T  28948947 taatttgtcttgaaatacaaaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatattaacacataaaatagacacattaactacactaa 28949046  T
Q  223 caattattattaagaaatgtg 243  Q
    ||| | || ||||||||||||    
T  28949047 caacttttcttaagaaatgtg 28949067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 52141162 - 52141238
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    ||||||| |||||||||||||||||| ||||||||||| ||||||| || ||||||| |||||||||||||||||||    
T  52141162 ttgtcttaaaatataaaaagtcaaatttaatacacatacaaacaaaagataatttgataatattaacacacaaaata 52141238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 130 - 201
Target Start/End: Complemental strand, 8877885 - 8877814
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||   |||||||||||||||||    
T  8877885 tcttgaaatataaaaagtcaaatttaatacacatacaaacaaatgacaatttcgtaatattaacacacaaaa 8877814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 120 - 242
Target Start/End: Complemental strand, 32144434 - 32144312
Alignment:
Q  120 tattaatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcac 219  Q
    |||||| ||||||| |||||| ||||||||||| | ||||||||| |||||||||||||||||  ||||||||| ||||||||| | |  |||| |||||    
T  32144434 tattaacttgtcttaaaatatgaaaagtcaaattttatacacatacaaacaaatgacaatttggtaatattaacgcacaaaatagacacattaaatgcac 32144335  T
Q  220 taacaattattattaagaaatgt 242  Q
     ||||| | || |||||||||||    
T  32144334 caacaacttttcttaagaaatgt 32144312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 3072253 - 3072157
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaa 225  Q
    |||||||||||||| ||||||||||| ||||||||||| ||| |||  ||||||| | |||||||||||| |||||||| |  ||||||||||||||||    
T  3072253 ttgtcttgaaatatgaaaagtcaaatttaatacacataaaaaaaaa--acaatttaataatattaacacataaaataaacacattaattgcactaacaa 3072157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 130 - 201
Target Start/End: Original strand, 23982582 - 23982653
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||||||||| ||||||||||| ||||||| ||| ||||||||| |||||||| |||||||||||||||||    
T  23982582 tcttgaaatatgaaaagtcaaatttaatacatatacaaacaaatgtcaatttgataatattaacacacaaaa 23982653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 243
Target Start/End: Original strand, 28723638 - 28723756
Alignment:
Q  127 ttgtcttgaaatata--aaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaaca 224  Q
    |||||||||||||||  ||||||||||| ||||||||||| ||||||| || ||||||  ||||||||||||||||||| | |  |||||| ||||||||    
T  28723638 ttgtcttgaaatatatgaaaagtcaaatttaatacacatacaaacaaaagataatttggtaatattaacacacaaaatagacacattaattacactaaca 28723737  T
Q  225 attattattaagaaatgtg 243  Q
    | | || |||| |||||||    
T  28723738 acttttcttaaaaaatgtg 28723756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 243
Target Start/End: Original strand, 51390524 - 51390638
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||    || |||||||||||||| | |  ||||||||| |||||||    
T  51390524 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttg---gtaataacacacaaaatagacacattaattgcattaacaat 51390620  T
Q  227 tatt-attaagaaatgtg 243  Q
    | ||  ||||||||||||    
T  51390621 tcttctttaagaaatgtg 51390638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 4817893 - 4817967
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||| | ||||||||||| ||||||||||| ||||||| |||||||||| |||||||| ||||||||    
T  4817893 ttgtcttgaaatttgaaaagtcaaatttaatacacatacaaacaaaagacaatttgataatattaatacacaaaa 4817967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 4829693 - 4829767
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||| | ||||||||||| ||||||||||| ||||||| |||||||||| |||||||| ||||||||    
T  4829693 ttgtcttgaaatttgaaaagtcaaatttaatacacatacaaacaaaagacaatttgataatattaatacacaaaa 4829767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 48721855 - 48721929
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||||| ||||||||   |||||||||||||||||    
T  48721855 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttcgtaatattaacacacaaaa 48721929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 127 - 200
Target Start/End: Complemental strand, 3143519 - 3143446
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaa 200  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||||| ||||||||   ||||||||||||||||    
T  3143519 ttgtcttgaaatatgaaaagtcaaatttaatacacataaaaacaaaagacaattttgtaatattaacacacaaa 3143446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 203
Target Start/End: Complemental strand, 2343016 - 2342944
Alignment:
Q  131 cttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    |||||||||| ||||||||||| ||||||||| | ||||||| |||||||||  |||||||||||||||||||    
T  2343016 cttgaaatatgaaaagtcaaatttaatacacacacaaacaaaagacaatttggtaatattaacacacaaaata 2342944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 3831163 - 3831087
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    |||||||||||||| ||||||||||| ||| | ||||| ||||||||||||||||   |||||||||||||||||||    
T  3831163 ttgtcttgaaatatgaaaagtcaaatttaacatacatacaaacaaatgacaatttcgtaatattaacacacaaaata 3831087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 16582649 - 16582533
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||||||||||||| ||||||||||| ||||||||||| ||| ||| ||||||||   ||||||||||||||||| | | |  |||||| |||| ||||     
T  16582649 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaataaaagacaatttcgtaatattaacacacaaaacagacacattaattacactgacaac 16582550  T
Q  227 tattattaagaaatgtg 243  Q
    | || ||||||||||||    
T  16582549 ttttcttaagaaatgtg 16582533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 203
Target Start/End: Complemental strand, 31305438 - 31305358
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    |||||| ||||||||||| ||||||||||| ||||||||||| ||||||| |||||||||  ||||||| || ||||||||    
T  31305438 taatttatcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttggtaatattagcatacaaaata 31305358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 33231956 - 33231840
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||||||||||||| |||||||| || ||||||||||| ||||||| ||||||||   ||||||||||||||||| | | |  |||||| |||| ||||     
T  33231956 ttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaaggacaatttcgtaatattaacacacaaaacagacacattaattacactgacaac 33231857  T
Q  227 tattattaagaaatgtg 243  Q
    | || ||||||||||||    
T  33231856 tttttttaagaaatgtg 33231840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 47070948 - 47071024
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    |||||||||||||| |||| |||||| |||||| |||| |||||||||||||||||  |||||||||||| ||||||    
T  47070948 ttgtcttgaaatatgaaaaatcaaatttaatacgcatacaaacaaatgacaatttggtaatattaacacataaaata 47071024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 132 - 243
Target Start/End: Original strand, 4813454 - 4813565
Alignment:
Q  132 ttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattatta 231  Q
    ||||||||| ||||||||||| ||| ||||||| |||||||  | ||||||  ||||||||||||||||||| | |  ||||||||| |||||| | ||     
T  4813454 ttgaaatatgaaaagtcaaatttaacacacatacaaacaaagaataatttggtaatattaacacacaaaatagacacattaattgcattaacaacttttc 4813553  T
Q  232 ttaagaaatgtg 243  Q
    ||||||||||||    
T  4813554 ttaagaaatgtg 4813565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 201
Target Start/End: Original strand, 5085079 - 5085150
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||||||||| ||||||||||| ||||||||||| ||||||| ||||||||   |||||||||||||||||    
T  5085079 tcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaagacaatttcgtaatattaacacacaaaa 5085150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 130 - 243
Target Start/End: Complemental strand, 10842440 - 10842329
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattat 229  Q
    ||||||||||| ||||||||||| ||| ||||||| ||||||| || ||||||  ||||||||  ||||||||| | || ||||||||| |||||| | |    
T  10842440 tcttgaaatatgaaaagtcaaatttaacacacatacaaacaaacgataatttggtaatattaa--cacaaaatagacatattaattgcattaacaacttt 10842343  T
Q  230 tattaagaaatgtg 243  Q
    | ||||||||||||    
T  10842342 tcttaagaaatgtg 10842329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 29140641 - 29140715
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||||| ||||||||   |||||||| ||||||||    
T  29140641 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaattttgtaatattaatacacaaaa 29140715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 32047557 - 32047442
Alignment:
Q  127 ttgtcttgaaatat-aaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaa 225  Q
    |||||||||||||| |||||||||||| |||  |||||| ||||||||||||||||   ||||||||||||||||| ||| |  |||||| |||| ||||    
T  32047557 ttgtcttgaaatatgaaaaagtcaaatttaa--cacatacaaacaaatgacaatttcgtaatattaacacacaaaacaaacacattaattacactgacaa 32047460  T
Q  226 ttattattaagaaatgtg 243  Q
     | || ||||||||||||    
T  32047459 cttttcttaagaaatgtg 32047442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 34102452 - 34102378
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||| ||||||||||| ||||| ||||| |||||||  | ||||||| |||||||||||||||||    
T  34102452 ttgtcttgaaatatgaaaagtcaaatttaataaacatacaaacaaagaataatttgataatattaacacacaaaa 34102378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 46591218 - 46591144
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||| | |||| |||||| ||||||||||| ||||||| ||||||| || |||||||||||||||||    
T  46591218 ttgtcttgaaatttgaaaaatcaaatttaatacacatagaaacaaaggacaattcgataatattaacacacaaaa 46591144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 126 - 243
Target Start/End: Original strand, 34696869 - 34696986
Alignment:
Q  126 tttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaa 225  Q
    ||||||||||||||  ||||||||||| | || |||||| ||||||||||||||||   ||||||||||||||||| | | || |||||| |||| ||||    
T  34696869 tttgtcttgaaataggaaaagtcaaatttcatgcacatacaaacaaatgacaatttcgtaatattaacacacaaaacagacatattaattacactgacaa 34696968  T
Q  226 ttattattaagaaatgtg 243  Q
     | || |||| |||||||    
T  34696969 cttttcttaaaaaatgtg 34696986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 15179526 - 15179410
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||||||||||||  ||||||||||| ||||||||||| ||||||| ||||||||   |||||| || || |||||| | |  |||||| |||| |||||    
T  15179526 ttgtcttgaaatacgaaaagtcaaatttaatacacatacaaacaaaggacaattttgtaatatttacgcataaaatagacacattaattacactgacaat 15179427  T
Q  227 tattattaagaaatgtg 243  Q
    | || ||||||||||||    
T  15179426 ttttcttaagaaatgtg 15179410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 243
Target Start/End: Original strand, 15911539 - 15911655
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||||||||||||| ||| |||| || ||||||||||| |||||||||   |||||  ||||||||||||||||||| | |  |||| | |||||||||     
T  15911539 ttgtcttgaaatatgaaatgtcacatttaatacacatacaaacaaatggttatttggtaatattaacacacaaaatagacacattaagtacactaacaac 15911638  T
Q  227 tattattaagaaatgtg 243  Q
    | || ||||||||||||    
T  15911639 ttttcttaagaaatgtg 15911655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 147 - 243
Target Start/End: Complemental strand, 41737221 - 41737125
Alignment:
Q  147 tcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattattattaagaaatgtg 243  Q
    |||||| ||| ||||||| ||||||| |||||||||  ||||||||||||||||||| | || |||||| ||||||||| | || ||||||| ||||    
T  41737221 tcaaatttaaaacacatacaaacaaaagacaatttggtaatattaacacacaaaatagacattttaattacactaacaacttttcttaagaagtgtg 41737125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 130 - 201
Target Start/End: Original strand, 5852841 - 5852912
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||||||||| ||||||||||| ||||||||||  ||||||| ||||||||  ||||||||||||| ||||    
T  5852841 tcttgaaatatgaaaagtcaaatttaatacacatgcaaacaaaggacaatttcggaatattaacacataaaa 5852912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 130 - 225
Target Start/End: Original strand, 28679812 - 28679906
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaa 225  Q
    ||||||||||| |||| |||||| ||||||||||| |||||||  ||||||| | ||||||||||||||||||| | |  ||||||||| ||||||    
T  28679812 tcttgaaatattaaaaatcaaatttaatacacatacaaacaaa-aacaatttaataatattaacacacaaaatagacacattaattgcattaacaa 28679906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 243
Target Start/End: Complemental strand, 44395650 - 44395535
Alignment:
Q  128 tgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaatt 227  Q
    ||||||||||||| |||| |||||| ||||| ||||| ||||||| || |||||   |||||||||||| |||||||| || |||||| |||| ||||      
T  44395650 tgtcttgaaatatgaaaaatcaaatttaatatacatacaaacaaaggataattttgtaatattaacacataaaataaacatattaattacactgacaaca 44395551  T
Q  228 attattaagaaatgtg 243  Q
     || ||||||||||||    
T  44395550 tttcttaagaaatgtg 44395535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 25063326 - 25063252
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||| |||||||| |||||| |||| ||||||||||| ||||||| ||||||| |  |||||||||||||||||    
T  25063326 ttgtcgtgaaatatgaaaagtgaaatttaatacacatacaaacaaaggacaattaggtaatattaacacacaaaa 25063252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 46495433 - 46495351
Alignment:
Q  120 tattaatttgtctt-gaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||| ||||||| ||||| | ||||||||||| ||||| ||||| ||| ||| |||||||||| |||||||||||||||||    
T  46495433 tattaacttgtctttgaaatttgaaaagtcaaatttaatatacatacaaataaaggacaatttgataatattaacacacaaaa 46495351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 203
Target Start/End: Original strand, 291625 - 291698
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    |||| ||||||||||||| |||| ||||||| ||| ||||||||||||||||   |||||||||| ||||||||    
T  291625 tcttaaaatataaaaagttaaatttaatacaaatacaaacaaatgacaatttagtaatattaacatacaaaata 291698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 20564891 - 20564822
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacaca 196  Q
    |||||||||||||| ||||||||||| ||||||||||  ||||||| ||||||||   ||||||||||||    
T  20564891 ttgtcttgaaatatgaaaagtcaaatttaatacacattcaaacaaaagacaattttgtaatattaacaca 20564822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 203
Target Start/End: Complemental strand, 30336172 - 30336099
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    ||||||||||| |||| |||||| | |||| |||| ||||||| |||||||||  |||||||||||||||||||    
T  30336172 tcttgaaatatgaaaattcaaattttatacgcatagaaacaaaggacaatttggtaatattaacacacaaaata 30336099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 243
Target Start/End: Complemental strand, 44163321 - 44163232
Alignment:
Q  154 taatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattattattaagaaatgtg 243  Q
    ||||||||||| |||||||||||||||| | ||||||||||||||||| ||| |  |||||| |||| | || | || ||||||||||||    
T  44163321 taatacacatacaaacaaatgacaatttaataatattaacacacaaaacaaacacattaattacactgataactttttttaagaaatgtg 44163232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 32715641 - 32715597
Alignment:
Q  120 tattaatttgtcttgaaatataaaaagtcaaatctaatacacata 164  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||    
T  32715641 tattattttgtcttgaaatataaaaagtcaaatttaatacacata 32715597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 123 - 175
Target Start/End: Original strand, 46732943 - 46732995
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatga 175  Q
    |||||||||||||||||| ||||||||||| ||||||||||| ||| ||||||    
T  46732943 taatttgtcttgaaatatgaaaagtcaaatttaatacacatacaaataaatga 46732995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 193
Target Start/End: Complemental strand, 10160825 - 10160762
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaac 193  Q
    ||||||||||| ||||||||||| ||||||||||| ||||||||||  |||| | |||||||||    
T  10160825 tcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgaatatttcataatattaac 10160762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 201
Target Start/End: Complemental strand, 13145531 - 13145460
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||| |||||| ||||||||||| |||| |||||| ||||||| |||||||||  |||||||||| ||||||    
T  13145531 tcttaaaatatgaaaagtcaaatttaatgcacatacaaacaaaggacaatttggtaatattaacatacaaaa 13145460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 23393502 - 23393597
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaa 225  Q
    |||||||||||||| || ||||||||  |||||||||| |||||||||||||||| | || ||||| |||||||||| |||  |||||| || ||||||    
T  23393502 ttgtcttgaaatatgaatagtcaaat--aatacacatacaaacaaatgacaatttaataa-attaatacacaaaatagatacattaattacattaacaa 23393597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 5322010 - 5322084
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||| ||||||||| | ||||||| ||| |||||||| |||||||   ||||| |||||||||||    
T  5322010 ttgtcttgaaatatgaaaagtcaattttaatacatatacaaacaaataacaatttcgtaatataaacacacaaaa 5322084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 31807959 - 31808057
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaa 225  Q
    |||||||||||||  ||| ||||||| | ||||||||  ||||||| || ||||||  ||||||||||||||||||| | |  |||||| |||||||||    
T  31807959 ttgtcttgaaataggaaatgtcaaatttgatacacatgcaaacaaaagataatttggtaatattaacacacaaaatagacacattaattacactaacaa 31808057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 172
Target Start/End: Complemental strand, 34331988 - 34331946
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaa 172  Q
    ||||||||||| ||||||||||| |||||||||||||||||||    
T  34331988 tcttgaaatatgaaaagtcaaatttaatacacatataaacaaa 34331946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 44652848 - 44652922
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||| ||||||||| ||||||||||| ||||||||||| |||||||  ||||| ||  |||||||| ||||||||    
T  44652848 ttgttttgaaatatgaaaagtcaaatttaatacacatacaaacaaagaacaatgtggtaatattaaaacacaaaa 44652922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 243
Target Start/End: Original strand, 47133465 - 47133543
Alignment:
Q  166 aaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaa-ttattattaagaaatgtg 243  Q
    |||||||||||||||| | ||||||||||||||||||||| |  |||||| || |||||| || || ||||||||||||    
T  47133465 aaacaaatgacaatttaataatattaacacacaaaataaacacattaattacattaacaatttttttttaagaaatgtg 47133543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 6282563 - 6282490
Alignment:
Q  154 taatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaatt 227  Q
    ||||||| ||||||||||| |||||||| | |||||||||||| |||||| | |  ||||||| ||||||||||    
T  6282563 taatacatatataaacaaaggacaattttataatattaacacataaaatagacacattaattgtactaacaatt 6282490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 243
Target Start/End: Original strand, 30898553 - 30898666
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattat 229  Q
    |||| |||||| || ||||| || ||||||||||| ||||||| || ||||||  |||||||||||| |||| | | |  |||||| |||| |||||| |    
T  30898553 tcttaaaatatgaatagtcacatttaatacacatacaaacaaaggataatttggtaatattaacacataaaacagacacattaattacactgacaatttt 30898652  T
Q  230 tattaagaaatgtg 243  Q
    | ||||||||||||    
T  30898653 tcttaagaaatgtg 30898666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 34012603 - 34012558
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaa 172  Q
    |||||||||||||| |||||| |||| |||||||||||||||||||    
T  34012603 ttgtcttgaaatatgaaaagttaaatttaatacacatataaacaaa 34012558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 47643656 - 47643587
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacaca 196  Q
    |||||||||||| | ||||||||||| ||||||||||  ||||||| ||||||||   ||||||||||||    
T  47643656 ttgtcttgaaatttgaaaagtcaaatttaatacacatgcaaacaaaggacaatttagtaatattaacaca 47643587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 201
Target Start/End: Complemental strand, 51997066 - 51996997
Alignment:
Q  132 ttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||||| | ||||||||||| ||||||||||| ||||||| ||| |||||  |||||||||||| ||||    
T  51997066 ttgaaatttgaaaagtcaaatttaatacacatacaaacaaaggacgatttggtaatattaacacagaaaa 51996997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 9675659 - 9675727
Alignment:
Q  132 ttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaa 200  Q
    ||||||||| || |||||||| ||||||||||| ||| ||| ||||||||   ||||||||||||||||    
T  9675659 ttgaaatatgaatagtcaaatttaatacacatacaaataaaggacaatttcgtaatattaacacacaaa 9675727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 25258432 - 25258348
Alignment:
Q  141 aaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaa 225  Q
    ||||||| |||| ||||||||||| ||||||| |||||||||  ||||| || ||| |||||| | |  ||||||||||||||||    
T  25258432 aaaaagttaaatttaatacacatacaaacaaaggacaatttggtaatatcaagacataaaatagacacattaattgcactaacaa 25258348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 36085086 - 36084970
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||||| ||||||| |||||| |||| ||||||||||| ||| ||| || |||||   ||||||||||||||||| | |||  |||||| |||| | |||    
T  36085086 ttgtctcgaaatatgaaaagttaaatttaatacacatacaaataaaggataatttcttaatattaacacacaaaacagatacattaattacactgataat 36084987  T
Q  227 tattattaagaaatgtg 243  Q
    | || |||| |||||||    
T  36084986 ttttcttaaaaaatgtg 36084970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 243
Target Start/End: Complemental strand, 44335403 - 44335289
Alignment:
Q  132 ttgaaatataaaaagtcaaatctaat---acacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaatta 228  Q
    ||||||| | ||||||||||| ||||   |||| || ||||||| |||||||||  ||||||||||||||||| | | |  |||||| |||| |||| |     
T  44335403 ttgaaatttgaaaagtcaaatttaattatacacgtacaaacaaaggacaatttggtaatattaacacacaaaacagacacattaattacactgacaactt 44335304  T
Q  229 ttattaagaaatgtg 243  Q
    |||||||||||||||    
T  44335303 ttattaagaaatgtg 44335289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 127 - 218
Target Start/End: Complemental strand, 4082042 - 4081951
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgca 218  Q
    ||||||| |||||| |||| |||||| ||||||||||| | |||||||| |||||   |||||||||| ||||| |||| |  |||||||||    
T  4082042 ttgtctttaaatatgaaaaatcaaatttaatacacatacagacaaatgataatttagtaatattaacatacaaactaaacacattaattgca 4081951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 203
Target Start/End: Original strand, 16395528 - 16395611
Alignment:
Q  120 tattaatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    |||||| ||||  |||||||| ||||||||||| | | ||||||| ||||||| || ||||||  |||||||||| ||||||||    
T  16395528 tattaacttgttatgaaatatgaaaagtcaaattttacacacatacaaacaaaagataatttggtaatattaacatacaaaata 16395611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 201
Target Start/End: Complemental strand, 25269486 - 25269419
Alignment:
Q  134 gaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||||| ||||||||||| ||||||||||| ||||||| || |||||   |||||||||||| ||||    
T  25269486 gaaatatgaaaagtcaaatttaatacacatacaaacaaaggaaaatttcgtaatattaacacataaaa 25269419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 133 - 243
Target Start/End: Complemental strand, 50692520 - 50692409
Alignment:
Q  133 tgaaatataaaaagtcaaatcta-atacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattatta 231  Q
    |||||||| || |||||||| || | ||||||| ||||||| |||||||||  |||| |||||||||||||| | |  ||||||||| | |||| | ||     
T  50692520 tgaaatatgaacagtcaaatttataaacacatacaaacaaaggacaatttggtaatactaacacacaaaatagacacattaattgcattgacaacttttc 50692421  T
Q  232 ttaagaaatgtg 243  Q
    ||||||||||||    
T  50692420 ttaagaaatgtg 50692409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 35001273 - 35001331
Alignment:
Q  143 aaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||| |||| ||||||||||| ||||||| |||||||| | || ||||||||||||||    
T  35001273 aaagttaaatttaatacacatacaaacaaaggacaatttcataacattaacacacaaaa 35001331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 3143723 - 3143792
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacaca 196  Q
    |||||||||||||| |||| | | || ||||| ||||| ||||||| |||||||||| |||| |||||||    
T  3143723 ttgtcttgaaatatgaaaaataatatttaataaacatacaaacaaaagacaatttgataataataacaca 3143792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 13352949 - 13352876
Alignment:
Q  126 tttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||||| ||||||| ||||| ||||| |||||||  || ||| |||||||||||||  |||||||||||| ||||    
T  13352949 tttgtctcgaaatatgaaaaggcaaatataataca--tacaaataaatgacaatttgctaatattaacacataaaa 13352876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 40702534 - 40702458
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    |||| ||| |||||||||| ||||||  ||||||||||||||||||  ||||||| | |||||| || || ||||||    
T  40702534 ttgtattggaatataaaaattcaaattcaatacacatataaacaaaaaacaatttaataatattcacgcataaaata 40702458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 5e-28; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 132 - 243
Target Start/End: Original strand, 31746399 - 31746510
Alignment:
Q  132 ttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattatta 231  Q
    ||||||||| ||||||||||| ||||||||||| ||||||||||||||||   ||||||||||||||||||| | |  |||||||||||||||||| ||     
T  31746399 ttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaattttgtaatattaacacacaaaatagacacattaattgcactaacaatttttc 31746498  T
Q  232 ttaagaaatgtg 243  Q
    ||||||||||||    
T  31746499 ttaagaaatgtg 31746510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 117 - 242
Target Start/End: Complemental strand, 25888722 - 25888597
Alignment:
Q  117 tagtattaatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattg 216  Q
    ||||| ||||||||||| |||||| |||| |||||| ||||||||||| |||||||||||||| ||| |||||||||| |||||||| | || ||||||     
T  25888722 tagtactaatttgtcttaaaatatgaaaaatcaaatttaatacacatacaaacaaatgacaatatgataatattaacatacaaaatagacatattaatta 25888623  T
Q  217 cactaacaattattattaagaaatgt 242  Q
    ||||||||| | || |||||||||||    
T  25888622 cactaacaacttttcttaagaaatgt 25888597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 119 - 201
Target Start/End: Complemental strand, 44255578 - 44255496
Alignment:
Q  119 gtattaatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||| ||||||||| |||||||||||||||||| |||||||| || |||||||||||||||||| |||||||||||||||||    
T  44255578 gtattgatttgtctttaaatataaaaagtcaaatttaatacacgtacaaacaaatgacaatttgataatattaacacacaaaa 44255496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 36309585 - 36309661
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    ||||||| |||||| ||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  36309585 ttgtcttaaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttgataatattaacacacaaaata 36309661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 36437618 - 36437502
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||||| |||||||||  ||| ||||||||||||||| | |  ||||||||||||||| |    
T  36437618 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttggtaatgttaacacacaaaatagacacattaattgcactaacatt 36437519  T
Q  227 tattattaagaaatgtg 243  Q
    | || |||| |||||||    
T  36437518 ttttcttaaaaaatgtg 36437502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 127 - 243
Target Start/End: Original strand, 38202981 - 38203097
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||||||||||||| |||| |||||| ||||||||||| ||||||||||||||||   ||||||||||||||||| ||| || |||||| |||  ||||     
T  38202981 ttgtcttgaaatatgaaaaatcaaatttaatacacatacaaacaaatgacaatttcgtaatattaacacacaaaacaaacatattaattacaccgacaac 38203080  T
Q  227 tattattaagaaatgtg 243  Q
    | |||||||||||||||    
T  38203081 ttttattaagaaatgtg 38203097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 38761347 - 38761421
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||| ||||||||||| ||||||||||| |||||||||||||||| | |||||||||||||||||    
T  38761347 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttcataatattaacacacaaaa 38761421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 123 - 200
Target Start/End: Complemental strand, 885582 - 885505
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaa 200  Q
    |||||||||||||||| | ||||||||||| ||||||||||| ||||||| |||||||||| ||||||||||||||||    
T  885582 taatttgtcttgaaatttgaaaagtcaaatttaatacacatacaaacaaaggacaatttgataatattaacacacaaa 885505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 130 - 243
Target Start/End: Original strand, 3113525 - 3113638
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattat 229  Q
    ||||||||||| |||| | |||| ||||||||||||||||||| |||||||||| ||||||||||||||||| | | || |||||| |||| | |||| |    
T  3113525 tcttgaaatatgaaaaattaaatttaatacacatataaacaaaagacaatttgataatattaacacacaaaacagacatattaattacactgataatttt 3113624  T
Q  230 tattaagaaatgtg 243  Q
    | ||||||||||||    
T  3113625 ttttaagaaatgtg 3113638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 243
Target Start/End: Original strand, 5191538 - 5191653
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||||||||||||| |||| |||||| ||||||||||||||||||  |||||||||  ||||||||||||||||| | | |  |||||||| ||||||||    
T  5191538 ttgtcttgaaatatgaaaaatcaaatttaatacacatataaacaatggacaatttggtaatattaacacacaaaacagacacattaattgc-ctaacaat 5191636  T
Q  227 tattattaagaaatgtg 243  Q
    | || ||||||||||||    
T  5191637 ttttcttaagaaatgtg 5191653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 243
Target Start/End: Complemental strand, 34882791 - 34882671
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaa 222  Q
    |||||| |||| |||||| ||||||||||| ||| ||||||| ||||||| || ||||||| ||||||||||||||||||| | |  ||||||||| |||    
T  34882791 taatttatcttaaaatatgaaaagtcaaatttaacacacatacaaacaaaagataatttgataatattaacacacaaaatagacacattaattgcattaa 34882692  T
Q  223 caattattattaagaaatgtg 243  Q
    ||||| || |||| |||||||    
T  34882691 caatttttcttaaaaaatgtg 34882671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 130 - 201
Target Start/End: Original strand, 24512159 - 24512230
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||||||||| ||||||||||| ||||||||||| ||||||| |||||||||| |||||||||||||||||    
T  24512159 tcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaagacaatttgataatattaacacacaaaa 24512230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 12762959 - 12762861
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaa 225  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||||| ||||||||   ||||||||||||||||||| | |  ||||||||| ||||||    
T  12762959 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatattaacacacaaaatagacacattaattgcattaacaa 12762861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 127 - 205
Target Start/End: Original strand, 38770176 - 38770254
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaa 205  Q
    |||||||||||||| ||||||||||  ||||||||||| ||||||||||||||||   |||||||||||||||||||||    
T  38770176 ttgtcttgaaatatgaaaagtcaaaattaatacacatacaaacaaatgacaatttcgtaatattaacacacaaaataaa 38770254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 40517857 - 40517783
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||| ||||||||||||| ||||||||||| ||||||| |||||||||  |||||||||||||||||    
T  40517857 ttgtcttgaaatttaaaaagtcaaatttaatacacatacaaacaaaggacaatttggtaatattaacacacaaaa 40517783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 243
Target Start/End: Complemental strand, 25198403 - 25198290
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattat 229  Q
    ||||||||||| ||||||||||| | ||||||||| ||||||| |||||||||  ||||||||||||||||| ||| |  |||||| |||| |||| | |    
T  25198403 tcttgaaatatgaaaagtcaaattttatacacatacaaacaaaggacaatttggtaatattaacacacaaaacaaacacattaattacactgacaacttt 25198304  T
Q  230 tattaagaaatgtg 243  Q
    | ||||||||||||    
T  25198303 tcttaagaaatgtg 25198290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 243
Target Start/End: Original strand, 14577641 - 14577757
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||||||||||||| |||| |||||| ||||||||||| |||||||  ||||||||  |||||||||| |||||||| | |  |||||| |||||||||     
T  14577641 ttgtcttgaaatatgaaaaatcaaatttaatacacatacaaacaaagtacaatttggtaatattaacaaacaaaatagacacattaattacactaacaac 14577740  T
Q  227 tattattaagaaatgtg 243  Q
    | || ||||||||||||    
T  14577741 ttttcttaagaaatgtg 14577757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 243
Target Start/End: Original strand, 24962350 - 24962470
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaa 222  Q
    ||||||||||||||||| ||||||| |||| ||||||||||| ||||||| ||||||||   |||||||||||| |||||| | |  |||| | ||||||    
T  24962350 taatttgtcttgaaatacaaaaagttaaatttaatacacatacaaacaaaggacaatttagtaatattaacacataaaatagacacattaactacactaa 24962449  T
Q  223 caattattattaagaaatgtg 243  Q
    ||| | || ||||||||||||    
T  24962450 caacttttcttaagaaatgtg 24962470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 35794851 - 35794783
Alignment:
Q  135 aaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    |||||| ||||||||||| ||||||||||| |||||||||||||||||| |||||||| ||||||||||    
T  35794851 aaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttgataatattaatacacaaaata 35794783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 243
Target Start/End: Original strand, 43980568 - 43980688
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaa 222  Q
    |||||| |||||||||| |||||||||||| ||||||||||| |||||||||| |||||   |||||||||||| |||||| | |  |||| | ||||||    
T  43980568 taatttatcttgaaatacaaaaagtcaaatttaatacacatacaaacaaatgataatttagtaatattaacacataaaatagacacattaactacactaa 43980667  T
Q  223 caattattattaagaaatgtg 243  Q
    ||| | || ||||||||||||    
T  43980668 caacttttcttaagaaatgtg 43980688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 10396219 - 10396293
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||  ||||||||||| ||||||||||| ||||||||||||||||   |||||||||||||||||    
T  10396219 ttgtcttgaaatacgaaaagtcaaatttaatacacatacaaacaaatgacaatttcgtaatattaacacacaaaa 10396293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 203
Target Start/End: Complemental strand, 7172333 - 7172260
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    ||||||||||| ||||||||| | |||| |||||| |||||||||||||||| | |||||||||||||||||||    
T  7172333 tcttgaaatatgaaaagtcaattttaatgcacatacaaacaaatgacaattttataatattaacacacaaaata 7172260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 127 - 200
Target Start/End: Original strand, 14846910 - 14846983
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaa 200  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||  ||||||||| ||||||    
T  14846910 ttgtcttgaaatataaaaagtcaaatttaatacacatacaaacaaaagacaatatggtaatattaacgcacaaa 14846983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 243
Target Start/End: Original strand, 26878720 - 26878833
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattat 229  Q
    |||||||||||  |||||||||| ||||| ||||| ||||||| |||||||||  ||||||||||||||||||| | |  |||||| || |||||| | |    
T  26878720 tcttgaaatatgtaaagtcaaatttaatatacatacaaacaaaggacaatttggtaatattaacacacaaaatagacacattaattacattaacaacttt 26878819  T
Q  230 tattaagaaatgtg 243  Q
    | ||||||||||||    
T  26878820 tcttaagaaatgtg 26878833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 127 - 200
Target Start/End: Complemental strand, 41087091 - 41087018
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaa 200  Q
    |||||||||||||| |||| |||||| ||||||||||| ||||||| || ||||||| ||||||||||||||||    
T  41087091 ttgtcttgaaatatgaaaaatcaaatttaatacacatacaaacaaaggaaaatttgataatattaacacacaaa 41087018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 203
Target Start/End: Complemental strand, 34158038 - 34157958
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    ||||||||||| ||||| |||||| ||||| ||||||||||| ||||||||||||||||   |||||||||||| ||||||    
T  34158038 taatttgtcttaaaatacaaaaagccaaatttaatacacatacaaacaaatgacaatttagtaatattaacacataaaata 34157958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 243
Target Start/End: Complemental strand, 37141839 - 37141727
Alignment:
Q  131 cttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattatt 230  Q
    |||||||||  ||||||||||| ||||||||||| ||||||||||||||||   ||||||||||||||||| | |||  |||||| |||| |||| | ||    
T  37141839 cttgaaatacgaaaagtcaaatttaatacacatacaaacaaatgacaatttcgtaatattaacacacaaaacagatacattaattacactgacaactttt 37141740  T
Q  231 attaagaaatgtg 243  Q
     |||| |||||||    
T  37141739 tttaaaaaatgtg 37141727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 37956238 - 37956122
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||||||||||||| ||||||||||||||||| ||||| ||||||| ||||| ||   ||||||||||||||||| | | |  |||||| |||| ||||     
T  37956238 ttgtcttgaaatatgaaaagtcaaatctaatatacatacaaacaaaggacaaattcgtaatattaacacacaaaacagacacattaattacactgacaac 37956139  T
Q  227 tattattaagaaatgtg 243  Q
    | || ||||||||||||    
T  37956138 ttttcttaagaaatgtg 37956122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 201
Target Start/End: Complemental strand, 25185144 - 25185073
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||||||||| ||||| ||||| ||||||||||| ||||||||||||||||   |||||||||||||||||    
T  25185144 tcttgaaatatgaaaagacaaatttaatacacatacaaacaaatgacaatttcgtaatattaacacacaaaa 25185073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 222
Target Start/End: Complemental strand, 45203875 - 45203780
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaa 222  Q
    |||||||||||||| ||||||||||| |||||| |||| ||||||| ||||| |||  |||||||||| |||||||| | |  |||||||||||||    
T  45203875 ttgtcttgaaatatgaaaagtcaaatttaatacgcatacaaacaaaggacaagttggtaatattaacatacaaaatagacacattaattgcactaa 45203780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 1769437 - 1769510
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||||||||||||||| |||| |||||| |||||||||||||| ||  |||||||||| ||||||    
T  1769437 ttgtcttgaaatataaaaagtcaaatttaat-cacatacaaacaaatgacaatgtggtaatattaacatacaaaa 1769510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 30262527 - 30262625
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaa 225  Q
    |||||||||||| | |||||| | || ||| ||||||| |||||||||||||||||  |||||||||| |||||||| | |  ||||||||||||||||    
T  30262527 ttgtcttgaaatttgaaaagttagatttaagacacatacaaacaaatgacaatttggtaatattaacatacaaaatagacacattaattgcactaacaa 30262625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 45183850 - 45183924
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||||| |||| | ||||||||||| ||||||||||||||||||| |||||||||  |||||||||||| ||||    
T  45183850 ttgtcttcaaatttgaaaagtcaaatttaatacacatataaacaaaggacaatttggtaatattaacacataaaa 45183924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 34869940 - 34869871
Alignment:
Q  134 gaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    ||||||| ||||||||||| | || |||| |||||||||||||||||||| |||||||| ||||||||||    
T  34869940 gaaatatgaaaagtcaaattttatgcacagataaacaaatgacaatttgataatattaatacacaaaata 34869871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 12998682 - 12998758
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    |||||||||||||| ||| ||||||| ||||||||||| ||||||| ||||||||   |||||| ||||||||||||    
T  12998682 ttgtcttgaaatatgaaaggtcaaatttaatacacatacaaacaaaggacaatttagtaatattcacacacaaaata 12998758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 199
Target Start/End: Original strand, 24276546 - 24276618
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaa 199  Q
    |||| |||||||||  ||||| |||| ||||||||||| |||||||||||||||||  |||||||||||||||    
T  24276546 ttgttttgaaatatgtaaagtaaaatttaatacacatacaaacaaatgacaatttggtaatattaacacacaa 24276618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 57177 - 57251
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||| ||||||||||| ||||||||||| ||| |||  |||||||   |||||||||||||||||    
T  57177 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaataaagaacaatttcgtaatattaacacacaaaa 57251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 16002712 - 16002786
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||| ||||||||||||||||||||| ||||||| ||| ||||||| || |||||   |||||||||||||||||    
T  16002712 ttgttttgaaatataaaaagtcaaatttaatacaaatacaaacaaaggataatttcttaatattaacacacaaaa 16002786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 37600877 - 37600946
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacaca 196  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||||| || ||||||  | ||||||||||    
T  37600877 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaagataatttggcagtattaacaca 37600946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 243
Target Start/End: Original strand, 38773337 - 38773454
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaa- 225  Q
    |||||||||||||| |||| |||||| | ||||||||| ||||||| ||||||||   ||| ||||||||||||| | | |  ||||||||||| ||||     
T  38773337 ttgtcttgaaatatgaaaaatcaaatttcatacacatacaaacaaaagacaatttcgtaatgttaacacacaaaacagacacattaattgcactgacaac 38773436  T
Q  226 ttattattaagaaatgtg 243  Q
    || || ||||||||||||    
T  38773437 ttttttttaagaaatgtg 38773454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 200
Target Start/End: Complemental strand, 40790905 - 40790832
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaa 200  Q
    |||||||||||||| || |||||||| || |||| ||| |||||||||||||||||  |||||||| |||||||    
T  40790905 ttgtcttgaaatatgaatagtcaaatttattacatatacaaacaaatgacaatttggtaatattaatacacaaa 40790832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 243
Target Start/End: Complemental strand, 41541656 - 41541550
Alignment:
Q  135 aaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattattatta 234  Q
    |||||| ||||||||||| |||||||  |||||| ||| |||||||||| |||||| |||||||||||| | |  ||| ||| |||||| ||| || |||    
T  41541656 aaatatgaaaagtcaaatttaataca--tataaataaaggacaatttgataatattgacacacaaaatagacacattagttgtactaactatttttctta 41541559  T
Q  235 agaaatgtg 243  Q
    |||||||||    
T  41541558 agaaatgtg 41541550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 203
Target Start/End: Original strand, 43191469 - 43191542
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    ||||||||||| |||| | |||| ||||||||||| ||||||||||||||||   |||||||||||| ||||||    
T  43191469 tcttgaaatatgaaaatttaaatttaatacacatacaaacaaatgacaatttagtaatattaacacataaaata 43191542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 23399771 - 23399835
Alignment:
Q  132 ttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacaca 196  Q
    ||||||||| ||||||||||| ||||||||||| ||||||| ||||||||   ||||||||||||    
T  23399771 ttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatattaacaca 23399835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 243
Target Start/End: Original strand, 2562728 - 2562835
Alignment:
Q  136 aatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattattattaa 235  Q
    ||||| ||||||||||| ||||||||||| ||||||| ||||||||   |||||||||| |||||| | | |  |||||| |||| ||| || || ||||    
T  2562728 aatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttcgtaatattaacatacaaaacagacacattaattacactgacagtttttcttaa 2562827  T
Q  236 gaaatgtg 243  Q
    ||||||||    
T  2562828 gaaatgtg 2562835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 201
Target Start/End: Complemental strand, 7772626 - 7772555
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||||||||| |||||| |||| ||||||||||| ||| ||| ||||||||   |||||||||||||||||    
T  7772626 tcttgaaatatgaaaagtgaaatttaatacacatacaaataaaggacaatttcgtaatattaacacacaaaa 7772555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 137 - 203
Target Start/End: Complemental strand, 17933812 - 17933745
Alignment:
Q  137 atataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaata-ttaacacacaaaata 203  Q
    |||| ||||||||||| ||||||||||| |||||||||||| ||||  |||| |||||||||||||||    
T  17933812 atatgaaaagtcaaatttaatacacatacaaacaaatgacagtttggtaatatttaacacacaaaata 17933745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 39543649 - 39543704
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttg 182  Q
    ||||||||| |||| ||||||||||| ||||||||||| ||||||| |||||||||    
T  39543649 ttgtcttgagatatgaaaagtcaaatttaatacacatacaaacaaaagacaatttg 39543704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 27686 - 27628
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaattt 181  Q
    |||||||| ||| |||||||||| |||||| ||||||| | ||||||||||||||||||    
T  27686 taatttgttttgtaatataaaaaatcaaatttaatacatacataaacaaatgacaattt 27628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 240
Target Start/End: Original strand, 3006777 - 3006883
Alignment:
Q  134 gaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattattatt 233  Q
    ||||||||||||||||| | ||||||||||| | | |||||| |||||   |||||||||||| |||||| | || ||||||  |||||||| | || ||    
T  3006777 gaaatataaaaagtcaattttaatacacatacagataaatgataatttagtaatattaacacataaaatagacatattaattatactaacaacttttctt 3006876  T
Q  234 aagaaat 240  Q
    |||||||    
T  3006877 aagaaat 3006883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 40337180 - 40337254
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||| ||||||||| |  |||||||||| ||||||| ||||||||   |||||||||| ||||||    
T  40337180 ttgtcttgaaatatgaaaagtcaatttaaatacacatacaaacaaaggacaattttgtaatattaacatacaaaa 40337254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 243
Target Start/End: Complemental strand, 22590489 - 22590376
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattat 229  Q
    ||||| ||||| ||||||||||| ||| ||  ||| ||||||  |||||||||   ||||||||||| |||||| | |  |||||||||||||||| | |    
T  22590489 tcttgcaatatgaaaagtcaaatttaacacttatacaaacaatggacaatttggtgatattaacacaaaaaatagacacattaattgcactaacaaattt 22590390  T
Q  230 tattaagaaatgtg 243  Q
    | ||||||||||||    
T  22590389 tcttaagaaatgtg 22590376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 205
Target Start/End: Complemental strand, 31673708 - 31673635
Alignment:
Q  132 ttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaa 205  Q
    ||||||| | || |||||||| ||||||||||| ||||||| || ||||||  |||||||||| ||||||||||    
T  31673708 ttgaaatttgaatagtcaaatttaatacacatacaaacaaaggataatttggtaatattaacatacaaaataaa 31673635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 196
Target Start/End: Original strand, 35709098 - 35709157
Alignment:
Q  137 atataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacaca 196  Q
    |||| ||||||||||| ||||||||| ||| || || |||||||||| ||||||||||||    
T  35709098 atatgaaaagtcaaatttaatacacacatatacgaaagacaatttgataatattaacaca 35709157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 127 - 166
Target Start/End: Original strand, 40808000 - 40808039
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatata 166  Q
    |||||||||||||| ||||||||||| |||||||||||||    
T  40808000 ttgtcttgaaatatgaaaagtcaaatttaatacacatata 40808039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 14739546 - 14739468
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaa 205  Q
    |||||||||||||| || ||||| || ||||||||| | ||||||| || ||||||  |||||||||| | ||||||||    
T  14739546 ttgtcttgaaatatgaatagtcacatttaatacacacacaaacaaaggataatttggtaatattaacatataaaataaa 14739468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 31252644 - 31252718
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||||| |||||| ||||||||||| ||||||||||  |||||||||   ||||   |||||||||||||||||    
T  31252644 ttgtcttaaaatatgaaaagtcaaatttaatacacatgcaaacaaatgtttatttcgtaatattaacacacaaaa 31252718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 173
Target Start/End: Complemental strand, 33385363 - 33385317
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaat 173  Q
    |||||||||||||  ||||||||||| ||||| ||||||||||||||    
T  33385363 ttgtcttgaaatacgaaaagtcaaatttaatatacatataaacaaat 33385317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 14522641 - 14522709
Alignment:
Q  175 acaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattattattaagaaatgtg 243  Q
    ||||||||  ||||||||||||||||| | | |  |||||| ||||||||||| || ||||||||||||    
T  14522641 acaatttggtaatattaacacacaaaacatacacattaattacactaacaatttttcttaagaaatgtg 14522709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 40602035 - 40602099
Alignment:
Q  132 ttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacaca 196  Q
    ||||||||| |||| |||||| ||||||||||| ||||||| || |||||   ||||||||||||    
T  40602035 ttgaaatatgaaaaatcaaatttaatacacatacaaacaaaggataatttagtaatattaacaca 40602099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 3e-26; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 127 - 227
Target Start/End: Original strand, 12514574 - 12514674
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||||| |||||||||  ||||||||||||||||||| | |  |||||||||||||||||    
T  12514574 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaagacaatttggtaatattaacacacaaaatagacacattaattgcactaacaat 12514673  T
Q  227 t 227  Q
    |    
T  12514674 t 12514674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 130 - 242
Target Start/End: Complemental strand, 31536126 - 31536014
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattat 229  Q
    ||||||||||| ||||||||||| ||||||||||||||||||| || ||||||| |||||||||| | |||||| |||| |||||| ||||||||| | |    
T  31536126 tcttgaaatatgaaaagtcaaatttaatacacatataaacaaaagataatttgataatattaacaaataaaatagatatattaattacactaacaacttt 31536027  T
Q  230 tattaagaaatgt 242  Q
    | |||||||||||    
T  31536026 tcttaagaaatgt 31536014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 127 - 243
Target Start/End: Original strand, 31945901 - 31946017
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    ||||||||||||||  |||||||||| ||||||||||||||||||| |||||||||  ||||||||||||||||||| | |  |||||| |||||||||     
T  31945901 ttgtcttgaaatatgtaaagtcaaatttaatacacatataaacaaacgacaatttggtaatattaacacacaaaatagacacattaattacactaacaaa 31946000  T
Q  227 tattattaagaaatgtg 243  Q
    | || ||||||||||||    
T  31946001 ttttcttaagaaatgtg 31946017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 6791493 - 6791419
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||| ||||||||||||| ||||||||||| |||||||||||||||| | |||||||||||||||||    
T  6791493 ttgtcttgaaatttaaaaagtcaaatttaatacacatacaaacaaatgacaatttaataatattaacacacaaaa 6791419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 143 - 225
Target Start/End: Original strand, 1514233 - 1514315
Alignment:
Q  143 aaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaa 225  Q
    |||||||||| |||||||||||||||||| ||| ||||||  |||||||||| |||||||||| || ||||||||||||||||    
T  1514233 aaagtcaaatttaatacacatataaacaattgataatttggtaatattaacatacaaaataaacatattaattgcactaacaa 1514315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 243
Target Start/End: Complemental strand, 19839052 - 19838932
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaa 222  Q
    |||||| |||||||||| |||||||||||| ||||||||||| ||||||| ||||||||   |||||||||||| |||||| | |  |||| | ||||||    
T  19839052 taatttatcttgaaatacaaaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatattaacacataaaatagacacattaactacactaa 19838953  T
Q  223 caattattattaagaaatgtg 243  Q
    ||| | || ||||||||||||    
T  19838952 caacttttcttaagaaatgtg 19838932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 130 - 242
Target Start/End: Original strand, 30465960 - 30466072
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattat 229  Q
    ||||||||||| ||||||||||| ||||||||||| ||||||| || ||||||  ||||||||||||||||| ||| || |||||| |||  |||| | |    
T  30465960 tcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaagataatttggtaatattaacacacaaaacaaacatattaattacaccgacaacttt 30466059  T
Q  230 tattaagaaatgt 242  Q
    | |||||||||||    
T  30466060 tgttaagaaatgt 30466072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 120 - 243
Target Start/End: Complemental strand, 15981918 - 15981795
Alignment:
Q  120 tattaatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcac 219  Q
    |||||| |||||||||||||| |||||| |||| ||| ||||||| |||| ||||||||||||  ||||||||||||||||| | | |  |||||| |||    
T  15981918 tattaacttgtcttgaaatatgaaaagttaaatttaagacacatacaaactaatgacaatttggtaatattaacacacaaaacagacacattaattacac 15981819  T
Q  220 taacaattattattaagaaatgtg 243  Q
     ||||| | || ||||||||||||    
T  15981818 caacaacttttcttaagaaatgtg 15981795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 16327240 - 16327166
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||| |||||| |||| ||||||| ||| |||||||||||||||||  |||||||||||||||||    
T  16327240 ttgtcttgaaatatgaaaagttaaatttaatacaaatacaaacaaatgacaatttggtaatattaacacacaaaa 16327166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 16350638 - 16350564
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||| |||||| |||| ||||||| ||| |||||||||||||||||  |||||||||||||||||    
T  16350638 ttgtcttgaaatatgaaaagttaaatttaatacaaatacaaacaaatgacaatttggtaatattaacacacaaaa 16350564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 127 - 243
Target Start/End: Original strand, 28238302 - 28238419
Alignment:
Q  127 ttgtcttgaaatat-aaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaa 225  Q
    |||||||||||||| |||||||||||| ||||| ||||| ||||||  || ||| ||  ||||||||||||||||||| | |  ||||||  ||||||||    
T  28238302 ttgtcttgaaatatgaaaaagtcaaatttaataaacataaaaacaatggataatatggtaatattaacacacaaaatagacacattaattatactaacaa 28238401  T
Q  226 ttattattaagaaatgtg 243  Q
    || |||||||||||||||    
T  28238402 tttttattaagaaatgtg 28238419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 243
Target Start/End: Original strand, 5084530 - 5084646
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataa----atatcttaattgcactaacaa 225  Q
    ||||||||||||||||||||| | || |||||||| ||||||| |||||||||| ||||||||||||||||| ||    || | |||||| |||||||||    
T  5084530 tcttgaaatataaaaagtcaacttta-tacacatacaaacaaaggacaatttgataatattaacacacaaaacaaacacatttattaattacactaacaa 5084628  T
Q  226 ttattattaagaaatgtg 243  Q
     | || ||||||||||||    
T  5084629 cttttcttaagaaatgtg 5084646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 132 - 227
Target Start/End: Original strand, 10669268 - 10669363
Alignment:
Q  132 ttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaatt 227  Q
    ||||||||| ||||||||||| ||||||| ||| || ||||  ||||||||  ||||||||||||||||||| | |  ||||||||||||||||||    
T  10669268 ttgaaatatgaaaagtcaaatttaatacagatacaatcaaagaacaatttggtaatattaacacacaaaatagacacattaattgcactaacaatt 10669363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 1763930 - 1763856
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||| | ||||||||||| ||||||||||| ||||||| ||||||||   |||||||||||||||||    
T  1763930 ttgtcttgaaatttgaaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatattaacacacaaaa 1763856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 227
Target Start/End: Complemental strand, 33607466 - 33607372
Alignment:
Q  133 tgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaatt 227  Q
    |||||||| ||||||||||| ||| ||||||| ||||||| || ||||||| ||||||||||||| ||||| | |  ||||||||| ||||||||    
T  33607466 tgaaatatgaaaagtcaaatttaacacacatacaaacaaaggataatttgataatattaacacactaaatagacacattaattgcattaacaatt 33607372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 34513207 - 34513281
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||||| || |||||   |||||||||||||||||    
T  34513207 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggataatttcgtaatattaacacacaaaa 34513281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 243
Target Start/End: Original strand, 3887931 - 3888047
Alignment:
Q  127 ttgtcttgaaatat-aaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaa 225  Q
    |||||||||||||| ||||| |||||| |||||||||| |||||| | |||||||||  ||||||||||||||||||| | |  |||| |||| ||||||    
T  3887931 ttgtcttgaaatatgaaaaaatcaaatttaatacacatgtaaacataagacaatttgt-aatattaacacacaaaatagacacattaactgcaataacaa 3888029  T
Q  226 ttattattaagaaatgtg 243  Q
     | || ||||||||||||    
T  3888030 cttttcttaagaaatgtg 3888047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 203
Target Start/End: Complemental strand, 9428279 - 9428208
Alignment:
Q  132 ttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    ||||||||| |||||| ||||  |||| ||||| |||||||||| ||||||| |||||||||||||||||||    
T  9428279 ttgaaatatgaaaagtaaaattcaatatacatacaaacaaatgataatttgataatattaacacacaaaata 9428208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 202
Target Start/End: Original strand, 12514737 - 12514819
Alignment:
Q  120 tattaatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaat 202  Q
    |||||| || |||| |||||| ||| |||| || |||||||||||||||||||||| ||||||  |||||||||| |||||||    
T  12514737 tattaacttatcttcaaatatgaaaggtcatatttaatacacatataaacaaatgataatttggtaatattaacatacaaaat 12514819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 242
Target Start/End: Complemental strand, 3729484 - 3729391
Alignment:
Q  149 aaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattattattaagaaatgt 242  Q
    |||| ||||||||||| |||||||  ||||||||  ||||||||||||||||||| | |  |||||| ||| ||||||| || |||||||||||    
T  3729484 aaatttaatacacatacaaacaaagaacaatttggtaatattaacacacaaaatagacacattaattacaccaacaatttttcttaagaaatgt 3729391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 126 - 243
Target Start/End: Complemental strand, 11302973 - 11302856
Alignment:
Q  126 tttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaa 225  Q
    ||||||||||||| | ||||||||||| ||||||||||  ||||||| ||||||||   |||||||||||| |||| | | |  ||||||  ||||||||    
T  11302973 tttgtcttgaaatgtgaaaagtcaaatttaatacacatgcaaacaaaggacaattttgtaatattaacacaaaaaacagacacattaattatactaacaa 11302874  T
Q  226 ttattattaagaaatgtg 243  Q
     | || ||||||||||||    
T  11302873 cttttcttaagaaatgtg 11302856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 5895848 - 5895732
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||||||||||||| |||||| |||| ||||||||||| ||| ||| ||||||||   |||||||| |||||||| | | |  |||||| || ||||||     
T  5895848 ttgtcttgaaatatgaaaagttaaatttaatacacataaaaataaaggacaatttcgtaatattaatacacaaaacagacacattaattacattaacaac 5895749  T
Q  227 tattattaagaaatgtg 243  Q
    | || ||||||||||||    
T  5895748 ttttcttaagaaatgtg 5895732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 181
Target Start/End: Original strand, 12503592 - 12503656
Alignment:
Q  117 tagtattaatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaattt 181  Q
    ||||| ||| |||||||||||||| ||||||||||| || |||||||| ||||||| ||||||||    
T  12503592 tagtactaacttgtcttgaaatatgaaaagtcaaatttactacacatacaaacaaaagacaattt 12503656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 197440 - 197514
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||||| ||||  ||||| | |||| ||||||||||| |||||||||||||||| | |||||| ||||||||||    
T  197440 ttgtcttaaaattgaaaaaattaaatttaatacacatacaaacaaatgacaatttaataatattgacacacaaaa 197514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 3729539 - 3729485
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaattt 181  Q
    ||||||||||||||  ||||| |||| ||||||||||| ||||||||||||||||    
T  3729539 ttgtcttgaaatatgtaaagttaaatttaatacacatacaaacaaatgacaattt 3729485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 181
Target Start/End: Original strand, 7595580 - 7595638
Alignment:
Q  124 aatttgtcttgaaatataaaaagtcaaatctaatacacatat-aaacaaatgacaattt 181  Q
    ||||||||||||||||| ||||||||||| ||||||| |||| ||||||| ||||||||    
T  7595580 aatttgtcttgaaatatgaaaagtcaaatttaatacatatataaaacaaaagacaattt 7595638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 20523089 - 20522991
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaa 225  Q
    |||||||||||||| |||| |||||| ||||||||||| ||||||   | ||||||  |||||| ||||||||| ||||    ||||||||||||||||    
T  20523089 ttgtcttgaaatatgaaaaatcaaatttaatacacatacaaacaagaaataatttggtaatattgacacacaaactaaactcattaattgcactaacaa 20522991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 201
Target Start/End: Complemental strand, 9461409 - 9461336
Alignment:
Q  128 tgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||||||||||| ||||||||||| ||||||||||| |||||||  | |||||   |||||||||||| ||||    
T  9461409 tgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaagaataatttagtaatattaacacataaaa 9461336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 31152970 - 31153031
Alignment:
Q  120 tattaatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaattt 181  Q
    |||||| |||| || |||||| ||||||||||| ||||||||||| |||||||| |||||||    
T  31152970 tattaacttgttttaaaatatgaaaagtcaaatttaatacacatacaaacaaataacaattt 31153031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 240
Target Start/End: Complemental strand, 31780249 - 31780128
Alignment:
Q  120 tattaatttgtcttgaaatat-aaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgca 218  Q
    |||||| ||||||||||| || ||||||| |||| ||||||||| | ||||||| ||||||||   ||||| |||| |||||||| | |  |||||||||    
T  31780249 tattaacttgtcttgaaaaatgaaaaagtgaaatttaatacacaaacaaacaaaggacaatttagtaatatcaacatacaaaatagacacattaattgca 31780150  T
Q  219 ctaacaattattattaagaaat 240  Q
     || ||| | ||||||||||||    
T  31780149 ttatcaacttttattaagaaat 31780128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 31487056 - 31487108
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttg 182  Q
    ||||||||||| ||||||||||  ||||||||||| ||||||| |||||||||    
T  31487056 tcttgaaatatgaaaagtcaaacttaatacacatacaaacaaaagacaatttg 31487108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 243
Target Start/End: Original strand, 22410851 - 22410948
Alignment:
Q  146 gtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattattattaagaaatgtg 243  Q
    ||||||| ||||||||||| ||| ||| |||||||||  |||||||||| | |||| | | |  |||||| ||||||||| | || ||||||||||||    
T  22410851 gtcaaatttaatacacatacaaataaaagacaatttggtaatattaacataaaaaacagacacattaattacactaacaacttttcttaagaaatgtg 22410948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 190
Target Start/End: Complemental strand, 6419016 - 6418956
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatatt 190  Q
    ||||||||||| ||||||||||| ||||||| ||| |||||||  | ||||||| ||||||    
T  6419016 tcttgaaatatgaaaagtcaaatgtaatacaaatacaaacaaagaaaaatttgataatatt 6418956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 175
Target Start/End: Complemental strand, 31039263 - 31039215
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatga 175  Q
    |||||||||||||| |||||||||||  ||| |||||| ||||||||||    
T  31039263 ttgtcttgaaatatgaaaagtcaaattaaatgcacatacaaacaaatga 31039215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 3e-26; HSPs: 68)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 26512188 - 26512072
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||   |||||||||||| |||||||| |  ||||||  |||||||||    
T  26512188 ttgtcttgaaatataaaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatattaacacataaaataaacacattaattatactaacaat 26512089  T
Q  227 tattattaagaaatgtg 243  Q
    | || ||||||||||||    
T  26512088 tttttttaagaaatgtg 26512072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 127 - 240
Target Start/End: Complemental strand, 21012970 - 21012857
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||| ||||||||||||||||||||| |||||  |||| ||||||| || ||||||| ||||||||||||||||||||| |  ||||||||||||||||     
T  21012970 ttgttttgaaatataaaaagtcaaatttaatatgcatacaaacaaaggataatttgataatattaacacacaaaataaacacattaattgcactaacaac 21012871  T
Q  227 tattattaagaaat 240  Q
    | || |||||||||    
T  21012870 ttttcttaagaaat 21012857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 24774982 - 24774866
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||||| |||||||||  ||||||||||||||||||| |||  |||||| |||||| ||     
T  24774982 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaagacaatttggtaatattaacacacaaaatagatacattaattacactaataaa 24774883  T
Q  227 tattattaagaaatgtg 243  Q
    | || |||| |||||||    
T  24774882 ttttcttaaaaaatgtg 24774866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 127 - 242
Target Start/End: Complemental strand, 2131874 - 2131759
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    ||||||| |||||| ||||||||||| ||||||| ||| ||||||| || ||||||  ||||||||||||||||||| | || ||||||||||||||||     
T  2131874 ttgtctttaaatatgaaaagtcaaatttaatacagatacaaacaaaagataatttggtaatattaacacacaaaatagacatgttaattgcactaacaac 2131775  T
Q  227 tattattaagaaatgt 242  Q
    | || |||||||||||    
T  2131774 ttttcttaagaaatgt 2131759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 375333 - 375409
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    |||||||||||||| |||| |||||| ||||||||||| |||||||||||||||||| |||| ||||||||||||||    
T  375333 ttgtcttgaaatatgaaaaatcaaatttaatacacatacaaacaaatgacaatttgataatactaacacacaaaata 375409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 243
Target Start/End: Complemental strand, 17663745 - 17663625
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaa 222  Q
    ||||||||||||||||| |||||||||||| ||||||||||| ||||||| ||||||||   |||||||||||| ||||||   |  |||||| ||||||    
T  17663745 taatttgtcttgaaatacaaaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatattaacacataaaataggcacattaattacactaa 17663646  T
Q  223 caattattattaagaaatgtg 243  Q
    ||| | || ||||||||||||    
T  17663645 caacttttcttaagaaatgtg 17663625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 37355153 - 37355037
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||   ||||||||||||||||| | | |  |||||| ||| |||||     
T  37355153 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaattttgtaatattaacacacaaaagagacacattaattacacaaacaac 37355054  T
Q  227 tattattaagaaatgtg 243  Q
    | || ||||||||||||    
T  37355053 ttttcttaagaaatgtg 37355037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 120 - 243
Target Start/End: Original strand, 28264932 - 28265055
Alignment:
Q  120 tattaatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcac 219  Q
    |||||| |||||||||||||| || |||||||| ||||| ||||| |||||||||||||||||  ||||||||| ||||||| ||| |  |||||| |||    
T  28264932 tattaacttgtcttgaaatatgaatagtcaaatttaatatacatacaaacaaatgacaatttggtaatattaacgcacaaaacaaacacattaattacac 28265031  T
Q  220 taacaattattattaagaaatgtg 243  Q
    | |||| | || ||||||||||||    
T  28265032 tgacaacttttcttaagaaatgtg 28265055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 126 - 243
Target Start/End: Complemental strand, 15851649 - 15851532
Alignment:
Q  126 tttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaa 225  Q
    ||||||||||||||| |||| |||||| ||||||||||||||||||| |||||||| | |||||||||||| |||| | | |  |||||| |||| ||||    
T  15851649 tttgtcttgaaatatgaaaattcaaatttaatacacatataaacaaaggacaatttcataatattaacacaaaaaacagacacattaattacactcacaa 15851550  T
Q  226 ttattattaagaaatgtg 243  Q
     | || ||||||||||||    
T  15851549 cttttcttaagaaatgtg 15851532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 41665834 - 41665753
Alignment:
Q  120 tattaatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||| |||||||||||||| |||||| |||| ||||||||||| ||||||| |||||||||| | |||||||||||||||    
T  41665834 tattaacttgtcttgaaatatgaaaagttaaatttaatacacatacaaacaaaggacaatttgatactattaacacacaaaa 41665753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 42250860 - 42250921
Alignment:
Q  120 tattaatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaattt 181  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  42250860 tattaacttgtcttgaaatataaaaagtcaaatttaatacacatataaataaatgacaattt 42250921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 203
Target Start/End: Original strand, 2521284 - 2521364
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    ||||||||||||||||| |||||||||||| ||||||||||| ||||||| |||||||| | ||||||| |||| ||||||    
T  2521284 taatttgtcttgaaatacaaaaagtcaaatttaatacacatacaaacaaaagacaatttaataatattaccacataaaata 2521364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 243
Target Start/End: Complemental strand, 20362103 - 20361984
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaa 222  Q
    ||||||||||||||||| |||||||||||| || |||||||| ||||||| ||||||||   |||||||||||| |||||| | |  |||| | ||||||    
T  20362103 taatttgtcttgaaatacaaaaagtcaaattta-tacacatacaaacaaaggacaatttagtaatattaacacataaaatagacacattaactacactaa 20362005  T
Q  223 caattattattaagaaatgtg 243  Q
    ||||| || ||||||||||||    
T  20362004 caatttttcttaagaaatgtg 20361984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 27297694 - 27297578
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||||| || |||||   ||||||||||||||||| | | |  |||||| |||||||| |    
T  27297694 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggataattttgtaatattaacacacaaaacagacacattaattacactaacagt 27297595  T
Q  227 tattattaagaaatgtg 243  Q
    | || ||||||||||||    
T  27297594 ttttcttaagaaatgtg 27297578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 243
Target Start/End: Complemental strand, 32677596 - 32677476
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaa 222  Q
    |||||||||||||||||| |||| |||||| || ||||  || |||||||||||||||||| ||||||||| || |||||| | |  ||||||| | |||    
T  32677596 taatttgtcttgaaatatgaaaaatcaaatttagtacatgtacaaacaaatgacaatttgaaaatattaacccataaaatagacacattaattgtattaa 32677497  T
Q  223 caattattattaagaaatgtg 243  Q
    ||||| || ||||||||||||    
T  32677496 caatttttcttaagaaatgtg 32677476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 44424712 - 44424596
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||||| ||||||||   |||||||||| |||||| | | |  |||||| |||||||||     
T  44424712 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttcgtaatattaacatacaaaacagacacattaattacactaacaac 44424613  T
Q  227 tattattaagaaatgtg 243  Q
    | || ||||||||||||    
T  44424612 ttttcttaagaaatgtg 44424596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 123 - 194
Target Start/End: Complemental strand, 28733944 - 28733873
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaaca 194  Q
    |||||| ||||||||||||||||||||||| | ||||||||| |||||||||||||||||  ||||||||||    
T  28733944 taatttatcttgaaatataaaaagtcaaattttatacacatacaaacaaatgacaatttggtaatattaaca 28733873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 4758147 - 4758065
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaa 205  Q
    |||||| |||| ||||||  |||||||||| ||||||||||| ||||||| |||||||| | |||||||||||||||||||||    
T  4758147 taatttttcttaaaatatgtaaagtcaaatttaatacacataaaaacaaaggacaatttcataatattaacacacaaaataaa 4758065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 130 - 243
Target Start/End: Complemental strand, 43710033 - 43709919
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattat 229  Q
    |||||||||||||||||| || | ||||||||||||||||||| |||||||    ||||||||||||||||||| |    |||||||||||||||||| |    
T  43710033 tcttgaaatataaaaagtaaattttaatacacatataaacaaaggacaattaagtaatattaacacacaaaatagacgcattaattgcactaacaatttt 43709934  T
Q  230 t-attaagaaatgtg 243  Q
    |  ||||||||||||    
T  43709933 tgcttaagaaatgtg 43709919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 127 - 243
Target Start/End: Original strand, 1246400 - 1246517
Alignment:
Q  127 ttgtcttgaaatat-aaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaa 225  Q
    |||||||||||||| |||||||||||| ||||||||||| |||||||  ||||||| | ||||||||||||||||| ||| |  ||||||  ||| ||||    
T  1246400 ttgtcttgaaatatgaaaaagtcaaatttaatacacatacaaacaaagaacaatttcataatattaacacacaaaacaaacacgttaattatactgacaa 1246499  T
Q  226 ttattattaagaaatgtg 243  Q
     | || ||||||||||||    
T  1246500 ctttttttaagaaatgtg 1246517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 135 - 243
Target Start/End: Original strand, 45150732 - 45150840
Alignment:
Q  135 aaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgag-aatattaacacacaaaataaatatcttaattgcactaacaattattatt 233  Q
    |||||| ||||||||||| ||||||||||| ||||||| ||||| ||||| |||||||||||||||||| || |  |||||||||| ||||| | || ||    
T  45150732 aaatatgaaaagtcaaatttaatacacatacaaacaaaggacaa-ttgagtaatattaacacacaaaatgaacacattaattgcacaaacaacttttctt 45150830  T
Q  234 aagaaatgtg 243  Q
    ||||||||||    
T  45150831 aagaaatgtg 45150840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 240
Target Start/End: Original strand, 8383964 - 8384073
Alignment:
Q  129 gtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaatta 228  Q
    |||||||||||| |||| ||| || |||||||  || | |||||||||||||||  ||||||||||||||||||||| |  |||||||||||||| |||     
T  8383964 gtcttgaaatatgaaaaatcatatttaataca--taaagacaaatgacaatttggtaatattaacacacaaaataaacacattaattgcactaactattt 8384061  T
Q  229 ttattaagaaat 240  Q
    || |||||||||    
T  8384062 ttcttaagaaat 8384073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 34330119 - 34330003
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||||||||||||| |||||| |||| ||||||||||| ||||||| ||||||||   ||||||||||||||||| |  ||  ||||||  ||||||||     
T  34330119 ttgtcttgaaatatgaaaagttaaatttaatacacatacaaacaaaggacaattttgtaatattaacacacaaaacaggtacattaattatactaacaac 34330020  T
Q  227 tattattaagaaatgtg 243  Q
    | || ||||||||||||    
T  34330019 tttttttaagaaatgtg 34330003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 243
Target Start/End: Original strand, 40346073 - 40346185
Alignment:
Q  131 cttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattatt 230  Q
    |||||||||| ||||||||||| ||||||||||| ||| ||| ||||||||   |||||||||||||||||| || |  |||||||||| ||||| | ||    
T  40346073 cttgaaatatgaaaagtcaaatttaatacacatacaaataaaagacaatttagtaatattaacacacaaaatgaacacattaattgcacaaacaactttt 40346172  T
Q  231 attaagaaatgtg 243  Q
     |||| |||||||    
T  40346173 cttaaaaaatgtg 40346185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 44421566 - 44421450
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    ||||||| |||| ||||||  ||||| ||||||||||| ||||||||||||||||   |||||||||| |||||| | |||  |||||| |||| |||||    
T  44421566 ttgtcttaaaatttaaaaaaacaaatttaatacacatacaaacaaatgacaatttagtaatattaacaaacaaaacagatacattaattacactgacaat 44421467  T
Q  227 tattattaagaaatgtg 243  Q
    | || ||||||||||||    
T  44421466 ttttcttaagaaatgtg 44421450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 243
Target Start/End: Complemental strand, 45214846 - 45214726
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaa 222  Q
    |||||| |||| |||||| |||||| |||| ||||||||||| ||||||| | |||||||| ||||||||||||||||| | | |  |||||| |||| |    
T  45214846 taatttatcttaaaatatgaaaagttaaatttaatacacatacaaacaaagggcaatttgaaaatattaacacacaaaacagacacattaattacactga 45214747  T
Q  223 caattattattaagaaatgtg 243  Q
    ||| | || ||||||||||||    
T  45214746 caacttttcttaagaaatgtg 45214726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 247777 - 247679
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaa 225  Q
    ||||||||| |||| ||||||||||| ||||| ||||| ||||||| | |||||| | ||||||||||||||||||| | |  |||||| |||||||||    
T  247777 ttgtcttgagatatgaaaagtcaaatttaatatacatacaaacaaagggcaattttataatattaacacacaaaatagacacattaattacactaacaa 247679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 3237840 - 3237766
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||||| || |||||   |||||||||||||||||    
T  3237840 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggataattttgtaatattaacacacaaaa 3237766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 17250949 - 17251023
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||| ||||||||| |  |||||||||| ||||||||||||||||   |||||||||||||||||    
T  17250949 ttgtcttgaaatatgaaaagtcaatttaaatacacatacaaacaaatgacaattttgtaatattaacacacaaaa 17251023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 28190715 - 28190617
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaa 225  Q
    |||||||||||||| |||| | |||  ||||||| ||| |||||||||||||||||  |||||||||||| |||||||| || ||||||  ||||||||    
T  28190715 ttgtcttgaaatatgaaaaattaaacttaatacatatacaaacaaatgacaatttggtaatattaacacaaaaaataaacatattaattatactaacaa 28190617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 38982059 - 38982133
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||| ||||||||||| ||||||||||| |||||||  | ||||||  |||||||||||||||||    
T  38982059 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaaaataatttggtaatattaacacacaaaa 38982133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 130 - 243
Target Start/End: Original strand, 7278604 - 7278717
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattat 229  Q
    ||||||||||| || |||||||| ||||||||||| ||||||| | |||||||| |||||   ||||||||| ||| || |||||| |||| |||||| |    
T  7278604 tcttgaaatattaatagtcaaatttaatacacatacaaacaaagggcaatttgataatatattcacacaaaacaaacatattaattacactgacaatttt 7278703  T
Q  230 tattaagaaatgtg 243  Q
    | |||| |||||||    
T  7278704 tcttaacaaatgtg 7278717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 11121329 - 11121259
Alignment:
Q  126 tttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacaca 198  Q
    ||||||||||||||||||||||||||| ||||  |||| |||||||| |||||||||| |||||| |||||||    
T  11121329 tttgtcttgaaatataaaaagtcaaatttaat--acatttaaacaaaggacaatttgataatatttacacaca 11121259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 38449703 - 38449776
Alignment:
Q  128 tgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||||||||||| || | |||||| ||||||||||| |||||||||| ||||||| |||||||| ||||||||    
T  38449703 tgtcttgaaatatgaataatcaaatttaatacacatacaaacaaatgataatttgataatattaatacacaaaa 38449776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 120 - 227
Target Start/End: Original strand, 6275548 - 6275655
Alignment:
Q  120 tattaatttgtcttgaaatataaaa-agtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgca 218  Q
    |||||| |||||||||||||| ||| ||| |||| ||||||| ||| ||||||| |||||||| | ||| ||||||||||||||| | |  |||||||||    
T  6275548 tattaacttgtcttgaaatatgaaatagttaaatttaatacatatacaaacaaaagacaatttcataat-ttaacacacaaaatagacacattaattgca 6275646  T
Q  219 ctaacaatt 227  Q
    |||||||||    
T  6275647 ctaacaatt 6275655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 130 - 201
Target Start/End: Original strand, 35241699 - 35241770
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||||| ||||||||||||||| || ||| |||| |||||||||| ||||||| |||||||||| ||||||    
T  35241699 tcttgaagtataaaaagtcaaatttattacgcatacaaacaaatgataatttgataatattaacaaacaaaa 35241770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 7255722 - 7255644
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||||||| ||||||||||| ||||||||| | || |||| || ||||||  |||||||| ||||||||    
T  7255722 taatttgtcttgaaatatgaaaagtcaaatttaatacacaaacaatcaaaggataatttggtaatattaatacacaaaa 7255644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 8065060 - 8065134
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||| |||| |||||  ||||||||||| ||||||| || ||||||  |||||||||||||||||    
T  8065060 ttgtcttgaaatatgaaaaatcaaagttaatacacatacaaacaaaggataatttggtaatattaacacacaaaa 8065134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 2048818 - 2048863
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaa 172  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||    
T  2048818 ttgtcttgaaatataaaaagtcaaatttaatacacatacaaacaaa 2048863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 225
Target Start/End: Complemental strand, 11071780 - 11071687
Alignment:
Q  132 ttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaa 225  Q
    ||||||||| ||||||||||| ||||||||||| || |||| ||||||||   |||||||||||| ||| || | |  ||||||||||||||||    
T  11071780 ttgaaatatgaaaagtcaaatttaatacacatacaagcaaaggacaatttagtaatattaacacataaattagacacattaattgcactaacaa 11071687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 200
Target Start/End: Original strand, 25731174 - 25731247
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaa 200  Q
    ||||||| |||||| |||| |||||| ||||| ||||| ||||||| || ||||||| ||||||||||||||||    
T  25731174 ttgtcttaaaatatgaaaaatcaaatttaatatacatacaaacaaaagataatttgataatattaacacacaaa 25731247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 243
Target Start/End: Original strand, 13477029 - 13477137
Alignment:
Q  135 aaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattattatta 234  Q
    |||||| |||| |||||| |||||  |||| ||| ||| |||||| |   |||||||||||| |||||||| || |||||||||||||||||| || |||    
T  13477029 aaatatgaaaaatcaaatttaatatgcatacaaataaaggacaatctagtaatattaacacataaaataaacatattaattgcactaacaatttttctta 13477128  T
Q  235 agaaatgtg 243  Q
    | |||||||    
T  13477129 aaaaatgtg 13477137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 14527740 - 14527664
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    |||| ||||||||| |||| |||||| ||||| ||||| |||||||||| |||| |  |||||||||||||||||||    
T  14527740 ttgttttgaaatatgaaaaatcaaatttaatatacatacaaacaaatgataattcggtaatattaacacacaaaata 14527664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 23464800 - 23464724
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    |||| ||||||||| ||||||||||| ||||||| ||| ||| ||| |||||||||| |||||| || |||||||||    
T  23464800 ttgttttgaaatatgaaaagtcaaatttaatacatatacaaataaaggacaatttgataatatttacgcacaaaata 23464724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 41865832 - 41865757
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    ||||||| |||||||||||||||||| ||||||||||| |||| || || ||||||  ||| |||||||||||||||    
T  41865832 ttgtcttaaaatataaaaagtcaaatttaatacacatacaaac-aaggataatttggtaatgttaacacacaaaata 41865757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 194
Target Start/End: Original strand, 43119360 - 43119424
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaaca 194  Q
    ||||||||||| |||| |||||| ||||||||||| ||||||||||||||||   ||||||||||    
T  43119360 tcttgaaatatgaaaaatcaaatttaatacacatacaaacaaatgacaatttagtaatattaaca 43119424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 201
Target Start/End: Complemental strand, 3326838 - 3326767
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||||||||| |||||| |||| | ||||||||||||||||| |||||||| | |||||||| | ||||||    
T  3326838 tcttgaaatatgaaaagttaaattttatacacatataaacaaaggacaatttaataatattaatatacaaaa 3326767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 201
Target Start/End: Original strand, 31644433 - 31644504
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||||| ||| |||| |||||| ||||||||||| ||||||||||||||||   |||||||||||| ||||    
T  31644433 tcttgaattatgaaaaatcaaatttaatacacatacaaacaaatgacaattttgtaatattaacacaaaaaa 31644504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 2917089 - 2917143
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaattt 181  Q
    ||||||| ||||||||||||| |||| ||||||||||| ||||||| ||||||||    
T  2917089 ttgtcttaaaatataaaaagttaaatttaatacacatacaaacaaaagacaattt 2917143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 11459270 - 11459196
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||| | |||| |||||| ||||||| ||| ||||||| ||||||||   |||||||||||||||||    
T  11459270 ttgtcttgaaatttgaaaaatcaaatttaatacatatacaaacaaaggacaatttagtaatattaacacacaaaa 11459196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 221
Target Start/End: Complemental strand, 44101481 - 44101395
Alignment:
Q  135 aaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcacta 221  Q
    ||||||||||| |||||| ||||||||||||||| |||  | |||||   |||||||| |||||||||||| |  ||||||||||||    
T  44101481 aaatataaaaaatcaaatttaatacacatataaataaagaataatttagtaatattaaaacacaaaataaacacattaattgcacta 44101395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 3389143 - 3389204
Alignment:
Q  120 tattaatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaattt 181  Q
    ||||||||||| |||||||| |||||||||||| ||||||||| | || ||| |||||||||    
T  3389143 tattaatttgttttgaaatacaaaaagtcaaatttaatacacacacaagcaattgacaattt 3389204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 201
Target Start/End: Complemental strand, 14420792 - 14420720
Alignment:
Q  128 tgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||||||||| | |||||| |||| ||||||||||  ||||||| |||||||||  |||||||||||||||||    
T  14420792 tgtcttgaaatttgaaaagttaaat-taatacacatgcaaacaaaggacaatttggtaatattaacacacaaaa 14420720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 239
Target Start/End: Original strand, 36174795 - 36174892
Alignment:
Q  142 aaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattattattaagaaa 239  Q
    ||||||||||| ||||||||||| ||| ||| |||||||| | |||| | |||||  ||||| | || ||| |||||||||||||| || ||||||||    
T  36174795 aaaagtcaaatttaatacacatacaaataaaagacaatttaataatactcacacatgaaatagacatattatttgcactaacaatttttcttaagaaa 36174892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 130 - 197
Target Start/End: Original strand, 7257929 - 7257996
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacac 197  Q
    |||| |||||||||||||||||| | |||||| || |||| ||||||||||| | |||||||| ||||    
T  7257929 tcttaaaatataaaaagtcaaattttatacacgtacaaacgaatgacaatttaataatattaatacac 7257996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 205
Target Start/End: Original strand, 43638824 - 43638887
Alignment:
Q  142 aaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaa 205  Q
    |||| |||||| ||||||||||||||| |||||| |||||   ||||||||||| |||||||||    
T  43638824 aaaaatcaaatttaatacacatataaataaatgataattttgtaatattaacacgcaaaataaa 43638887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 127 - 242
Target Start/End: Complemental strand, 43650151 - 43650036
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||| ||||||| ||||| ||||||| ||||||||||| |||||||  |||||||   |||||||||| |||||| | | |  |||||| |||| |||||    
T  43650151 ttgttttgaaatttaaaaggtcaaatttaatacacatacaaacaaagaacaatttagtaatattaacatacaaaacagacacattaattacactgacaat 43650052  T
Q  227 tattattaagaaatgt 242  Q
    | || | |||||||||    
T  43650051 ttttctaaagaaatgt 43650036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 3337781 - 3337727
Alignment:
Q  149 aaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||  |||||||    
T  3337781 aaatttaatacacgtataaacaaatgacaatttgctaatattaacatgcaaaata 3337727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 9718160 - 9718234
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||  | ||| ||||| ||||||||||| |||||||  | ||||||  |||||||||||||||||    
T  9718160 ttgtcttgaaatacgataagacaaatttaatacacatacaaacaaagaataatttggtaatattaacacacaaaa 9718234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 201
Target Start/End: Original strand, 35178785 - 35178855
Alignment:
Q  131 cttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||| ||||||||||| ||||||| ||| ||| ||| ||||||||   ||||||| |||||||||    
T  35178785 cttgaaatatgaaaagtcaaatttaatacaaatacaaataaaagacaatttcgtaatattatcacacaaaa 35178855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 181
Target Start/End: Complemental strand, 2654425 - 2654364
Alignment:
Q  120 tattaatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaattt 181  Q
    |||||| || |||| |||||| |||| ||||||  |||||||||||||||||| ||||||||    
T  2654425 tattaacttatcttaaaatatgaaaaatcaaattaaatacacatataaacaaaagacaattt 2654364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 4398545 - 4398610
Alignment:
Q  160 acatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaa 225  Q
    ||||| ||||||||||||||||   ||||||||||||||||||| | |  |||||| |||||||||    
T  4398545 acatacaaacaaatgacaatttcgtaatattaacacacaaaatagacacattaattacactaacaa 4398610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 12498256 - 12498301
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaa 172  Q
    |||||||||||||| |||| |||||| ||||||||||| |||||||    
T  12498256 ttgtcttgaaatatgaaaaatcaaatttaatacacatacaaacaaa 12498301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 220
Target Start/End: Original strand, 16808811 - 16808904
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcact 220  Q
    |||||||||||||| |||| | || | ||||| ||||| ||||||||||||||||   |||||||| ||| |||||| | |  |||||||||||    
T  16808811 ttgtcttgaaatatgaaaaattaattttaatatacatacaaacaaatgacaatttagtaatattaatacataaaatatacacattaattgcact 16808904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 220
Target Start/End: Original strand, 16848092 - 16848185
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcact 220  Q
    |||||||||||||| |||| | || | ||||| ||||| ||||||||||||||||   |||||||| ||| |||||| | |  |||||||||||    
T  16848092 ttgtcttgaaatatgaaaaattaattttaatatacatacaaacaaatgacaatttagtaatattaatacataaaatatacacattaattgcact 16848185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 164
Target Start/End: Original strand, 24490737 - 24490774
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacata 164  Q
    |||| ||||| |||||||||||||||||||||||||||    
T  24490737 ttgttttgaattataaaaagtcaaatctaatacacata 24490774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 203
Target Start/End: Complemental strand, 3645436 - 3645364
Alignment:
Q  131 cttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    |||||||||| ||||||||||| ||||| ||| | |||| || ||||||||   |||||||| ||||||||||    
T  3645436 cttgaaatatgaaaagtcaaatttaatatacacacaaacgaaggacaatttagtaatattaatacacaaaata 3645364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 44274685 - 44274729
Alignment:
Q  157 tacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||| |||||||||||||||||  |||||||||||| ||||    
T  44274685 tacacatacaaacaaatgacaatttggcaatattaacacataaaa 44274729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 243
Target Start/End: Original strand, 31373689 - 31373802
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattat 229  Q
    ||||||||||| ||||||||||| ||||||||||| ||||||| ||||||||   ||||||||||||||||||| | |  |||||||| ||||||||| |    
T  31373689 tcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatattaacacacaaaatagacacattaattgccctaacaatttt 31373788  T
Q  230 tattaagaaatgtg 243  Q
    | ||||||||||||    
T  31373789 tcttaagaaatgtg 31373802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 123 - 243
Target Start/End: Complemental strand, 48193736 - 48193616
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaa 222  Q
    |||||||||||||||||| ||||||||||| ||||||  ||||||||||| || ||||||  ||||||||||||||||||| | |  |||||| ||||||    
T  48193736 taatttgtcttgaaatatgaaaagtcaaatttaatactaatataaacaaaggataatttggtaatattaacacacaaaatagacacattaattacactaa 48193637  T
Q  223 caattattattaagaaatgtg 243  Q
    ||||| || |||| |||||||    
T  48193636 caatttttcttaaaaaatgtg 48193616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 132 - 243
Target Start/End: Complemental strand, 21752640 - 21752529
Alignment:
Q  132 ttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattatta 231  Q
    ||||||| | ||||||||||| ||||||||||| |||||||||| ||||||  ||||||||| ||||||||||| |  |||||||||||||||| | ||     
T  21752640 ttgaaatgtgaaaagtcaaatttaatacacatacaaacaaatgataatttggtaatattaacccacaaaataaacaaattaattgcactaacaacttttt 21752541  T
Q  232 ttaagaaatgtg 243  Q
    ||||||||||||    
T  21752540 ttaagaaatgtg 21752529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 1324825 - 1324751
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||| || ||||||||||||||    
T  1324825 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttgataagattaacacacaaaa 1324751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 120 - 243
Target Start/End: Original strand, 27162884 - 27163006
Alignment:
Q  120 tattaatttgtcttgaaatat-aaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgca 218  Q
    |||||| |||||||||||||| ||||||| |||| ||||||||||| |||||||||||||||||  |||||||| |||||||||| | |  |||||||||    
T  27162884 tattaacttgtcttgaaatatgaaaaagttaaatttaatacacatacaaacaaatgacaatttggcaatattaaaacacaaaatacaca--ttaattgca 27162981  T
Q  219 ctaacaattattattaagaaatgtg 243  Q
    ||||||| | |  ||||||||||||    
T  27162982 ctaacaactttacttaagaaatgtg 27163006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 27170135 - 27170032
Alignment:
Q  120 tattaatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcac 219  Q
    ||||||||||||||||||||| ||||||||||| ||||| |||||| ||||||| ||||||||  |||||| |||||||||||| | |  ||||||||||    
T  27170135 tattaatttgtcttgaaatatgaaaagtcaaatttaatagacatatgaacaaatcacaatttggtaatatt-acacacaaaatagacaaattaattgcac 27170037  T
Q  220 taaca 224  Q
    |||||    
T  27170036 taaca 27170032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 120 - 243
Target Start/End: Complemental strand, 27213611 - 27213488
Alignment:
Q  120 tattaatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcac 219  Q
    |||||| |||||||||||||| ||| ||||| | ||||| ||||| ||||||| ||||||||   ||||||||||||||||||| | || ||| ||||||    
T  27213611 tattaacttgtcttgaaatatgaaatgtcaattttaatagacatacaaacaaaggacaatttagtaatattaacacacaaaatagacatattagttgcac 27213512  T
Q  220 taacaattattattaagaaatgtg 243  Q
    |||||| | || ||||||||||||    
T  27213511 taacaacttttcttaagaaatgtg 27213488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 36116438 - 36116364
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||   |||||||||||| ||||    
T  36116438 ttgtcttgaaatataaaaagtcaaatttaatacacatacaaacaaatgacaatttcgtaatattaacacataaaa 36116364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 37673854 - 37673780
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||||| |||||||| | |||||||||||||||||    
T  37673854 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaagacaatttcataatattaacacacaaaa 37673780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 128 - 225
Target Start/End: Original strand, 21392882 - 21392979
Alignment:
Q  128 tgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaa 225  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||  | ||||||  ||||||||||| ||||||| | |  ||||||||||||||||    
T  21392882 tgtcttgaaatataaaaagtcaaatttaatacacatacaaacaaaatataatttggtaatattaacactcaaaatagacacattaattgcactaacaa 21392979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 21801037 - 21801118
Alignment:
Q  120 tattaatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||| ||| ||||||||||||   |||||||||||||||||    
T  21801037 tattaatttattttgaaatataaaaagtcaaatttaatacacatacaaataaatgacaatttagtaatattaacacacaaaa 21801118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 227
Target Start/End: Original strand, 5334379 - 5334483
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaa 222  Q
    |||||||||||||||| | ||||||||||| ||||||||||| |||||||||| | ||||  |||||||||| |||||| ||| |  |||||| ||||||    
T  5334379 taatttgtcttgaaatttgaaaagtcaaatttaatacacatacaaacaaatgatagtttggtaatattaacatacaaaacaaacacattaattacactaa 5334478  T
Q  223 caatt 227  Q
    |||||    
T  5334479 caatt 5334483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 243
Target Start/End: Original strand, 6376121 - 6376237
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    ||||||| |||| | |||||| |||| ||||||||||| ||||||||||||||||   ||||||||||||||||| | | |  |||||| ||||||||||    
T  6376121 ttgtcttaaaatttgaaaagttaaatttaatacacatacaaacaaatgacaatttagtaatattaacacacaaaacagagacattaattacactaacaat 6376220  T
Q  227 tattattaagaaatgtg 243  Q
    | || ||||||||||||    
T  6376221 ttttcttaagaaatgtg 6376237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 25750485 - 25750369
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||||||||||||| |||| |||||| ||||||||||| ||||||||||||||||   ||||||||||||||||| | | |  |||||| |||| ||||     
T  25750485 ttgtcttgaaatatgaaaaatcaaatttaatacacatacaaacaaatgacaattttgtaatattaacacacaaaacagacacattaattacactgacaac 25750386  T
Q  227 tattattaagaaatgtg 243  Q
    | || ||||||||||||    
T  25750385 tttttttaagaaatgtg 25750369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 243
Target Start/End: Original strand, 37491604 - 37491723
Alignment:
Q  124 aatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaac 223  Q
    |||||| |||||||||| ||||||||||| ||||||| ||| ||||||| || ||||||  |||||||||| | |||||| | |  ||||||||||||||    
T  37491604 aatttgccttgaaatatgaaaagtcaaatttaatacatatacaaacaaaggataatttggtaatattaacatataaaatagacacattaattgcactaac 37491703  T
Q  224 aattattattaagaaatgtg 243  Q
    || | || ||||||||||||    
T  37491704 aacttttcttaagaaatgtg 37491723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 130 - 201
Target Start/End: Original strand, 43465134 - 43465205
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||||||||| ||||||||||| ||||||||||| ||||||| |||||||||| |||| ||||||||||||    
T  43465134 tcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaagacaatttgaaaatactaacacacaaaa 43465205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 35128501 - 35128427
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||| |||| |||||| ||||||||||| ||||||| |||||||| | |||||||||||||||||    
T  35128501 ttgtcttgaaatatgaaaattcaaatttaatacacatacaaacaaaggacaatttcataatattaacacacaaaa 35128427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 36726162 - 36726259
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaa 225  Q
    |||| ||||||||| ||||||||||| ||||||||||| ||||||| |||||||||  ||||||||||||||||| ||| |  |||||| |||||||||    
T  36726162 ttgttttgaaatatgaaaagtcaaatttaatacacata-aaacaaaggacaatttggtaatattaacacacaaaacaaacacattaattacactaacaa 36726259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 243
Target Start/End: Complemental strand, 23876158 - 23876038
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaa 222  Q
    |||||||||||||||||  |||||| |||| ||||||||||| ||||||| ||||||||   |||||||||||| |||||  | || |||| | ||||||    
T  23876158 taatttgtcttgaaatacgaaaagttaaatttaatacacatacaaacaaaagacaatttagtaatattaacacataaaatggacatattaactacactaa 23876059  T
Q  223 caattattattaagaaatgtg 243  Q
    ||| | || ||||||||||||    
T  23876058 caactttttttaagaaatgtg 23876038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 243
Target Start/End: Complemental strand, 26632967 - 26632847
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaa 222  Q
    ||||||||||||||||| |||||||||||| |||| |||||| ||||||| || |||||   |||||||||||| |||||| | |  |||| | ||||||    
T  26632967 taatttgtcttgaaatacaaaaagtcaaatttaatgcacatacaaacaaaagataatttagtaatattaacacataaaatagacacattaactacactaa 26632868  T
Q  223 caattattattaagaaatgtg 243  Q
    ||||| || |||| |||||||    
T  26632867 caatttttcttaaaaaatgtg 26632847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 203
Target Start/End: Complemental strand, 28663876 - 28663796
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    |||||| ||||||||||| | ||||||||| ||||| ||||| |||||||| | ||||||| |||||||||||||||||||    
T  28663876 taatttatcttgaaatatgagaagtcaaatttaatatacatacaaacaaataataatttgataatattaacacacaaaata 28663796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 243
Target Start/End: Complemental strand, 40741066 - 40740951
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatata--aacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaatt 227  Q
    ||||||||||| ||||||||||| ||| |||||||||  || |||||| ||||||  ||||||||||||||||||| | || |||||| || |||||| |    
T  40741066 tcttgaaatatgaaaagtcaaatttaacacacatatacaaagaaatgataatttggtaatattaacacacaaaatagacatattaattacattaacaact 40740967  T
Q  228 attattaagaaatgtg 243  Q
     || ||||||||||||    
T  40740966 tttcttaagaaatgtg 40740951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 201
Target Start/End: Original strand, 2276568 - 2276639
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||||||| | ||||||||||| ||||||||||| ||||||| |||||||||  |||||||||||||||||    
T  2276568 tcttgaaatttgaaaagtcaaatttaatacacatacaaacaaaggacaatttggtaatattaacacacaaaa 2276639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 10685203 - 10685128
Alignment:
Q  126 tttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||||||||||||| ||||||||||| ||||||||||| ||||||| ||||||||   |||||||||||| ||||    
T  10685203 tttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttcgtaatattaacacataaaa 10685128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 132 - 243
Target Start/End: Complemental strand, 20123562 - 20123451
Alignment:
Q  132 ttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattatta 231  Q
    ||||||| | |||| |||||| ||||||||||| ||||||| |||||||||| ||||||||||||||||| | | |  |||||| |||| |||| | ||     
T  20123562 ttgaaatttgaaaattcaaatttaatacacatacaaacaaaggacaatttgataatattaacacacaaaacagacacattaattacactgacaacttttc 20123463  T
Q  232 ttaagaaatgtg 243  Q
    ||||||||||||    
T  20123462 ttaagaaatgtg 20123451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 43601153 - 43601207
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaattt 181  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||    
T  43601153 ttgtcttgaaatatgaaaagtcaaatttaatacacatataaacaaaggacaattt 43601207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 47458174 - 47458248
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||||||||||||||||  | |||| ||||||||||| ||||||| |||||||| | |||||||||||||||||    
T  47458174 ttgtcttgaaatataaaatattaaatttaatacacatacaaacaaaggacaatttcataatattaacacacaaaa 47458248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 48610124 - 48610198
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||||| ||||||||   |||||||| ||||||||    
T  48610124 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaagacaatttcgtaatattaatacacaaaa 48610198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 130 - 243
Target Start/End: Original strand, 46783832 - 46783945
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattat 229  Q
    ||||||||||| ||||||||||| |||||||||||  |||||| |||||||||  |||||||||||| || ||| | |  |||||| |||||| || | |    
T  46783832 tcttgaaatatgaaaagtcaaatttaatacacatacgaacaaaagacaatttggtaatattaacacataagatagacacattaatttcactaataacttt 46783931  T
Q  230 tattaagaaatgtg 243  Q
    | ||||||||||||    
T  46783932 tcttaagaaatgtg 46783945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 49100795 - 49100714
Alignment:
Q  120 tattaatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||| ||| ||||||||||| ||||||||||| ||||||||||| ||||||| ||||||||   |||||||||||| ||||    
T  49100795 tattattttatcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttcgtaatattaacacataaaa 49100714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 149 - 225
Target Start/End: Complemental strand, 4068494 - 4068418
Alignment:
Q  149 aaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaa 225  Q
    |||||||||||||||| |||||||  | ||||||| |||||||||| |||||||| |||| ||||||||| ||||||    
T  4068494 aaatctaatacacatacaaacaaagaataatttgataatattaacatacaaaatagatatattaattgcattaacaa 4068418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 243
Target Start/End: Original strand, 4089488 - 4089604
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||||||||||||| ||||||||||| ||||||| ||| ||||||| || |||||   ||||||||||||||||| | | |  |||||| |||| ||||     
T  4089488 ttgtcttgaaatatgaaaagtcaaatttaatacatatacaaacaaaagataatttcgtaatattaacacacaaaacagacacattaattacactgacaac 4089587  T
Q  227 tattattaagaaatgtg 243  Q
    | || ||||||||||||    
T  4089588 ttttcttaagaaatgtg 4089604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 130 - 194
Target Start/End: Complemental strand, 40263825 - 40263761
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaaca 194  Q
    ||||||||||| ||||||||||| ||||||||||| ||||||||||||||||   ||||||||||    
T  40263825 tcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaattttgtaatattaaca 40263761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 194
Target Start/End: Original strand, 42983602 - 42983669
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaaca 194  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||| | |||||||| | ||||||||||    
T  42983602 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacataagacaatttaataatattaaca 42983669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 21809635 - 21809709
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||| ||||||||| ||||||||||| ||||||||||| ||||||| ||||||||   |||||||||||| ||||    
T  21809635 ttgttttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatattaacacaaaaaa 21809709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 37048152 - 37048078
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||| ||||||||| || ||| |||| ||||||||||| ||||||| ||||||||| ||| ||||||||||||||    
T  37048152 ttgtattgaaatatgaatagttaaatttaatacacatacaaacaaaggacaatttgggaacattaacacacaaaa 37048078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 242
Target Start/End: Original strand, 42993169 - 42993291
Alignment:
Q  120 tattaatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcac 219  Q
    |||||| || ||||||||||| |||| |||||| |||||||||||  |||||| |  ||||||| |||||||||||| |||||| | |  ||||||| |     
T  42993169 tattaaattatcttgaaatatgaaaaatcaaatttaatacacatactaacaaaggttaatttgataatattaacacataaaatagacacgttaattgtat 42993268  T
Q  220 taacaattattattaagaaatgt 242  Q
    |||||| | || |||||||||||    
T  42993269 taacaacttttcttaagaaatgt 42993291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 201
Target Start/End: Complemental strand, 48767681 - 48767607
Alignment:
Q  128 tgtcttgaaatataaaaagtcaaatctaatacacata-taaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||||||||||| ||||||||||| |||||||||||  ||||||| ||||||||   |||||||||||||||||    
T  48767681 tgtcttgaaatatgaaaagtcaaatttaatacacatacaaaacaaaggacaatttcgtaatattaacacacaaaa 48767607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 201
Target Start/End: Complemental strand, 21388344 - 21388285
Alignment:
Q  142 aaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||||||||| ||||||||||| ||||||| ||||||||   |||||||||||||||||    
T  21388344 aaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatattaacacacaaaa 21388285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 243
Target Start/End: Complemental strand, 35960494 - 35960379
Alignment:
Q  128 tgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaatt 227  Q
    ||||||||||||| ||||||||||| ||| ||||||| ||||||| || |||||   ||||| || ||| |||||| | |  ||||||| ||||||||||    
T  35960494 tgtcttgaaatatgaaaagtcaaatttaacacacatacaaacaaaagataatttagtaatataaatacataaaatagacacattaattgtactaacaatt 35960395  T
Q  228 attattaagaaatgtg 243  Q
     || ||||| ||||||    
T  35960394 ttttttaaggaatgtg 35960379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 44648703 - 44648781
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttga--gaatattaacacacaaaata 203  Q
    |||||||||||||| |||| |||||| ||||||||||| |||| || ||||||||||   |||||||||| ||||||||    
T  44648703 ttgtcttgaaatatgaaaaatcaaatttaatacacatacaaactaaagacaatttgatccaatattaacatacaaaata 44648781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 19236055 - 19236129
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||| |||| |||||| ||||||||||| |||||||  ||||| ||  |||||||||| ||||||    
T  19236055 ttgtcttgaaatatgaaaaatcaaatttaatacacatacaaacaaagaacaatatggtaatattaacatacaaaa 19236129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 33181412 - 33181338
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||||| || ||| |||||| |||| ||||||||||| |||||||||||||||||  |||||||| | ||||||    
T  33181412 ttgtcttaaagtatgaaaagttaaatttaatacacatacaaacaaatgacaatttggtaatattaatatacaaaa 33181338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 240
Target Start/End: Original strand, 26200964 - 26201069
Alignment:
Q  135 aaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattattatta 234  Q
    |||||| |||||| |||| ||||||||||| |||||||  | ||||||| |||||||| |||||||||| | |   |||||||||||| || | || |||    
T  26200964 aaatatgaaaagttaaatttaatacacatacaaacaaagaataatttgataatattaatacacaaaatagacacaataattgcactaataacttttctta 26201063  T
Q  235 agaaat 240  Q
    ||||||    
T  26201064 agaaat 26201069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 13907731 - 13907787
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttga 183  Q
    ||||||| |||||| ||||||||||| || || ||||| ||||||||||||||||||    
T  13907731 ttgtctttaaatatgaaaagtcaaatttattaaacatacaaacaaatgacaatttga 13907787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 29636029 - 29636102
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||| |||| | ||||  |||||||||| ||||||| | |||||||  |||||||||||||||||    
T  29636029 ttgtcttgaaatatgaaaaattaaattaaatacacataaaaacaaa-ggcaatttggtaatattaacacacaaaa 29636102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 37136295 - 37136243
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttg 182  Q
    |||| |||||| ||||||||||| ||| ||||||| |||||||||| ||||||    
T  37136295 tcttaaaatatgaaaagtcaaatttaacacacatacaaacaaatgataatttg 37136243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 7e-24; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 120 - 224
Target Start/End: Original strand, 27047161 - 27047265
Alignment:
Q  120 tattaatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcac 219  Q
    |||||| ||||||| |||||||||||||||||| |||| |||||| ||||||| |||||||||  ||||||||||||||||||| | |  ||||||||||    
T  27047161 tattaaattgtcttaaaatataaaaagtcaaatttaatgcacatacaaacaaaagacaatttggtaatattaacacacaaaatagacacattaattgcac 27047260  T
Q  220 taaca 224  Q
    |||||    
T  27047261 taaca 27047265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 123 - 242
Target Start/End: Complemental strand, 22659700 - 22659581
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaa 222  Q
    |||||||| ||||||||| |||||| |||| ||||||||||| ||||||| || ||||||  |||||||||||||||||||||||  ||||||  |||||    
T  22659700 taatttgttttgaaatatgaaaagttaaatttaatacacatacaaacaaaagataatttggtaatattaacacacaaaataaatacattaattatactaa 22659601  T
Q  223 caattattattaagaaatgt 242  Q
    ||| | || |||||||||||    
T  22659600 caacttttcttaagaaatgt 22659581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 130 - 243
Target Start/End: Complemental strand, 11388234 - 11388121
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattat 229  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||  ||||||||  ||||||||||| ||||||| | |  |||||| ||||||||||| |    
T  11388234 tcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaatacaatttggtaatattaacacgcaaaatagacacattaattacactaacaatttt 11388135  T
Q  230 tattaagaaatgtg 243  Q
    | ||||||||||||    
T  11388134 tcttaagaaatgtg 11388121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 130 - 227
Target Start/End: Complemental strand, 44083740 - 44083643
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaatt 227  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||||| ||||||  ||||||||||||||||||| |||  |||||| || ||||||||    
T  44083740 tcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgataatttggtaatattaacacacaaaatagatacattaattacaataacaatt 44083643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 242
Target Start/End: Complemental strand, 26043132 - 26043020
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattat 229  Q
    ||||||||||| ||||||||||| ||||||||||| ||||||| |||||||||  || |||||||||||||| | | || |||||| |||| |||||| |    
T  26043132 tcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttggtaacattaacacacaaaacagacatattaattacactgacaatttt 26043033  T
Q  230 tattaagaaatgt 242  Q
    | |||||||||||    
T  26043032 tcttaagaaatgt 26043020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 242
Target Start/End: Complemental strand, 26121445 - 26121333
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattat 229  Q
    ||||||||||| ||||||||| | ||||||||||| ||||||| |||||||||| ||||||||||||||||| ||| |  |||||| |||| |||| | |    
T  26121445 tcttgaaatatgaaaagtcaagtttaatacacatacaaacaaaggacaatttgataatattaacacacaaaacaaacacattaattacactgacaacttt 26121346  T
Q  230 tattaagaaatgt 242  Q
    | |||||||||||    
T  26121345 tcttaagaaatgt 26121333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 243
Target Start/End: Original strand, 27638067 - 27638183
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||||||||||||| ||| ||||||| ||||||||||| ||||||| |||||||| | ||||||||||||||||||| | |  |||||| |||||| ||     
T  27638067 ttgtcttgaaatatgaaatgtcaaatttaatacacatacaaacaaaggacaattttataatattaacacacaaaatagagacattaattacactaataac 27638166  T
Q  227 tattattaagaaatgtg 243  Q
    | || ||||||||||||    
T  27638167 ttttcttaagaaatgtg 27638183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 33287982 - 33287906
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    |||||||||||||||||||||||||| ||||||||| | ||||||| |||||||| | |||||||||||||||||||    
T  33287982 ttgtcttgaaatataaaaagtcaaatttaatacacaaacaaacaaaggacaatttaataatattaacacacaaaata 33287906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 35055902 - 35055826
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    |||| ||||||||||||||||||||| ||||||||||| || ||||||||||||||  |||||||||||||||||||    
T  35055902 ttgtattgaaatataaaaagtcaaatttaatacacatacaagcaaatgacaatttggtaatattaacacacaaaata 35055826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 243
Target Start/End: Original strand, 48903069 - 48903189
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaa 222  Q
    |||||| ||||||||||| ||||||||||| ||||| | ||| ||||||||||||||||   ||||||||||||||||||| | |  |||||||||||||    
T  48903069 taatttttcttgaaatattaaaagtcaaatttaatatatatacaaacaaatgacaatttagtaatattaacacacaaaatagacaaattaattgcactaa 48903168  T
Q  223 caattattattaagaaatgtg 243  Q
    | ||| || |||| |||||||    
T  48903169 ctatttttcttaataaatgtg 48903189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 50363143 - 50363027
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||  |||||||| ||| |||| | | || |||||| |||| |||||    
T  50363143 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttggtaatattaatacataaaacagacatattaattacactgacaat 50363044  T
Q  227 tattattaagaaatgtg 243  Q
    | || |||| |||||||    
T  50363043 ttttcttaaaaaatgtg 50363027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 130 - 225
Target Start/End: Complemental strand, 26243585 - 26243490
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaa 225  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||||||||||| | || |||||||||||||| ||| || |||||| |||| ||||    
T  26243585 tcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttaataacattaacacacaaaacaaacatattaattacactgacaa 26243490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 120 - 243
Target Start/End: Original strand, 48901500 - 48901623
Alignment:
Q  120 tattaatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcac 219  Q
    ||||||||| |||| |||||| ||||||||||| ||||| | ||| ||||||||||||||||   ||||||||||||||||||| | |  ||||||||||    
T  48901500 tattaatttttcttaaaatattaaaagtcaaatttaatatatatacaaacaaatgacaatttagtaatattaacacacaaaatagacaaattaattgcac 48901599  T
Q  220 taacaattattattaagaaatgtg 243  Q
    |||| ||| || |||| |||||||    
T  48901600 taactatttttcttaataaatgtg 48901623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 132 - 205
Target Start/End: Complemental strand, 28243870 - 28243797
Alignment:
Q  132 ttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaa 205  Q
    |||||||||||||||| |||| ||||||||| ||||||||| ||||||||||  ||||||||||||||||||||    
T  28243870 ttgaaatataaaaagttaaatttaatacacacataaacaaaggacaatttgattatattaacacacaaaataaa 28243797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 243
Target Start/End: Original strand, 52325496 - 52325609
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattat 229  Q
    ||||||||||| |||| | |||| ||||| ||||||||||||| |||||||||| |||||||||||| |||||| | |  |||||| |||||||| || |    
T  52325496 tcttgaaatatgaaaaataaaatgtaataaacatataaacaaaggacaatttgataatattaacacataaaatagacacattaattacactaacattttt 52325595  T
Q  230 tattaagaaatgtg 243  Q
    | ||||||||||||    
T  52325596 tcttaagaaatgtg 52325609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 243
Target Start/End: Original strand, 14645879 - 14645995
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||||||||||| | |||| |||||| ||||||||||| |||||||| ||||||||  ||||||||||||||||||| | |  |||||| |||||||||     
T  14645879 ttgtcttgaaatttgaaaaatcaaatttaatacacatacaaacaaataacaatttggtaatattaacacacaaaatagacacattaattacactaacaac 14645978  T
Q  227 tattattaagaaatgtg 243  Q
    | || |||| |||||||    
T  14645979 ttttcttaaaaaatgtg 14645995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 50524966 - 50525042
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    |||||||||||| | ||||||||||| ||||||||||| ||||||| |||||||||  |||||||||||||||||||    
T  50524966 ttgtcttgaaatttcaaaagtcaaatttaatacacatacaaacaaaggacaatttggtaatattaacacacaaaata 50525042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 196
Target Start/End: Complemental strand, 44338207 - 44338128
Alignment:
Q  117 tagtattaatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacaca 196  Q
    ||||| ||| || ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||  ||||||||||||    
T  44338207 tagtactaacttatcttgaaatataaaaagtcaaatttaatacacatagaaacaaaggacaatttggtaatattaacaca 44338128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 12077733 - 12077807
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||| ||||||||| ||||||||||| ||||||||||| ||||||||||||||||   |||||||||||||||||    
T  12077733 ttgttttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaattttgtaatattaacacacaaaa 12077807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 28477505 - 28477427
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||||||| || |||||||| |||| |||||| ||||||| |||||||||  |||||||||||||||||    
T  28477505 taatttgtcttgaaatatgaatagtcaaatttaatgcacatacaaacaaaagacaatttggtaatattaacacacaaaa 28477427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 29611950 - 29611852
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaa 225  Q
    |||||||||||||| ||| ||||||| | ||||||||| ||||||| || ||||||| ||||||||||||||||||| | |  |||||| |||||||||    
T  29611950 ttgtcttgaaatatgaaatgtcaaatttgatacacatacaaacaaaagataatttgataatattaacacacaaaatagacacattaattacactaacaa 29611852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 123 - 240
Target Start/End: Complemental strand, 28228299 - 28228182
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaa 222  Q
    ||||||||||||||| || |||||||| || ||||||||||| |||||||||||  ||||| ||||| ||||||||||   || |  |||||||||||||    
T  28228299 taatttgtcttgaaaaatgaaaagtcacatttaatacacatacaaacaaatgacgttttgataatatgaacacacaaacacaacacattaattgcactaa 28228200  T
Q  223 caattattattaagaaat 240  Q
    ||| | || |||||||||    
T  28228199 caactttttttaagaaat 28228182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 243
Target Start/End: Original strand, 20945290 - 20945406
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    ||||||| |||||| ||||||||||| ||||||||||| ||||||| || |||| |  |||||||||||| |||||| | |  |||||| |||||||||     
T  20945290 ttgtcttaaaatatgaaaagtcaaatttaatacacatacaaacaaaggataattaggtaatattaacacataaaatagacacattaattacactaacaac 20945389  T
Q  227 tattattaagaaatgtg 243  Q
    | || ||||||||||||    
T  20945390 ttttcttaagaaatgtg 20945406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 243
Target Start/End: Original strand, 26517205 - 26517321
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||||||||||||| ||||||||||| ||||||||||| ||| ||| |||||||||  |||||||||||| |||| | | |  |||||| |||| ||||     
T  26517205 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaataaaggacaatttggtaatattaacacagaaaacagacacattaattacactgacaac 26517304  T
Q  227 tattattaagaaatgtg 243  Q
    | || ||||||||||||    
T  26517305 ttttcttaagaaatgtg 26517321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 243
Target Start/End: Original strand, 41727228 - 41727344
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||||||||||||| ||||||||||| ||||||||||| ||| ||| ||||||||   ||||||||||||||||| | | |  |||||| |||| ||||     
T  41727228 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaataaaggacaattttgtaatattaacacacaaaacagacacattaattacactgacaac 41727327  T
Q  227 tattattaagaaatgtg 243  Q
    | || ||||||||||||    
T  41727328 tttttttaagaaatgtg 41727344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 243
Target Start/End: Complemental strand, 42010988 - 42010868
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaa 222  Q
    |||||| ||||||||||| ||||||||||| ||| | ||||| |||||||  | ||||||| ||||||||||||||||||| | |  |||||| || |||    
T  42010988 taatttatcttgaaatatgaaaagtcaaatttaacatacatacaaacaaagaataatttgataatattaacacacaaaatagacacattaattacattaa 42010889  T
Q  223 caattattattaagaaatgtg 243  Q
    ||| | || ||||||||||||    
T  42010888 caaattttcttaagaaatgtg 42010868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 46048638 - 46048522
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||||| ||||||||   |||||||| |||||||| | | |  |||||| |||| ||||     
T  46048638 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttcgtaatattaatacacaaaacagacacattaattacactgacaac 46048539  T
Q  227 tattattaagaaatgtg 243  Q
    | || ||||||||||||    
T  46048538 ttttcttaagaaatgtg 46048522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 132 - 243
Target Start/End: Original strand, 37729024 - 37729135
Alignment:
Q  132 ttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattatta 231  Q
    ||||||||| | ||||||||| ||||||||||| ||||||| || ||| ||| ||||||||||||||||||| | |  ||||||  | |||||||| ||     
T  37729024 ttgaaatatgagaagtcaaatttaatacacatacaaacaaaagataatatgataatattaacacacaaaatagacacattaattatattaacaatttttc 37729123  T
Q  232 ttaagaaatgtg 243  Q
    ||||||||||||    
T  37729124 ttaagaaatgtg 37729135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 225
Target Start/End: Complemental strand, 29645466 - 29645376
Alignment:
Q  135 aaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaa 225  Q
    |||||| ||||||||||| ||||||||||| ||||||||||||||||   |||||||||||| |||| | |||  |||||| |||||||||    
T  29645466 aaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttcgtaatattaacacataaaacagatacattaattacactaacaa 29645376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 31819522 - 31819448
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||||| ||||||||   |||||||||||| ||||    
T  31819522 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttcgtaatattaacacataaaa 31819448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 39617240 - 39617314
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||||| ||||||||   |||||||||| ||||||    
T  39617240 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttcgtaatattaacatacaaaa 39617314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 201
Target Start/End: Original strand, 54425954 - 54426020
Alignment:
Q  135 aaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||| |||| | |||| |||||||||||||||||||||||||||||  |||||||||||||||||    
T  54425954 aaatatgaaaaattaaatttaatacacatataaacaaatgacaatttggtaatattaacacacaaaa 54426020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 130 - 203
Target Start/End: Complemental strand, 21933039 - 21932966
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    ||||||||||| ||||||||||| ||| ||||||| ||||||| || ||||||  |||||||||||||||||||    
T  21933039 tcttgaaatatgaaaagtcaaatttaacacacatacaaacaaaggataatttggtaatattaacacacaaaata 21932966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 130 - 243
Target Start/End: Complemental strand, 51263195 - 51263082
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattat 229  Q
    |||| |||||| ||||||||||| ||||||||||| ||||||| ||||||||   |||| ||||||| |||| | | |  |||||| ||||||||||| |    
T  51263195 tctttaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatactaacacataaaacagacacattaattacactaacaatttt 51263096  T
Q  230 tattaagaaatgtg 243  Q
    | ||||||||||||    
T  51263095 ttttaagaaatgtg 51263082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 195
Target Start/End: Original strand, 8818121 - 8818185
Alignment:
Q  131 cttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacac 195  Q
    |||||||||||||||||||||| ||||| | |||||||||||||||||||| | |||||| ||||    
T  8818121 cttgaaatataaaaagtcaaatttaatatatatataaacaaatgacaatttaacaatattcacac 8818185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 41543597 - 41543673
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    |||||||||||||| ||| ||||||| ||||||||||| ||| ||| |||||||| | ||||||| |||||||||||    
T  41543597 ttgtcttgaaatatgaaatgtcaaatttaatacacatacaaataaaagacaattttataatattatcacacaaaata 41543673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 195
Target Start/End: Original strand, 831355 - 831418
Alignment:
Q  132 ttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacac 195  Q
    ||||||||| |||| |||||| ||||||||||||||||||| |||||||||  |||||||||||    
T  831355 ttgaaatatgaaaaatcaaatttaatacacatataaacaaaggacaatttggtaatattaacac 831418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 130 - 201
Target Start/End: Complemental strand, 30476154 - 30476083
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||||||||| ||||||||||| ||||| ||||| ||||||| ||||||||   |||||||||||||||||    
T  30476154 tcttgaaatatgaaaagtcaaatttaatagacatacaaacaaaggacaatttcgtaatattaacacacaaaa 30476083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 40645790 - 40645716
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||| ||||  ||| | ||||||||||| ||||||| |||||||||  |||||||||||||||||    
T  40645790 ttgtcttgaaatatgaaaaaccaagtttaatacacatacaaacaaaagacaatttggtaatattaacacacaaaa 40645716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 41308766 - 41308840
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||| ||||| ||||| |||||||||||||||||||  | || |||  |||||||||||||||||    
T  41308766 ttgtcttgaaatatgaaaagccaaatttaatacacatataaacaaagaataaattggtaatattaacacacaaaa 41308840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 2421200 - 2421131
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacaca 196  Q
    |||||||  ||||||||||||||||| ||||| ||||| ||||||||||||||||   ||||||||||||    
T  2421200 ttgtctttgaatataaaaagtcaaatttaatatacatacaaacaaatgacaattttgtaatattaacaca 2421131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 240
Target Start/End: Original strand, 29676729 - 29676842
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    |||||||||||||| ||| | ||||| ||||||||||| ||| ||| ||||||||   |||||||||||| |||||| | |  |||||| |||| |||||    
T  29676729 ttgtcttgaaatatgaaatgccaaatttaatacacatacaaataaaagacaatttcgtaatattaacacataaaatagacacattaattacactgacaat 29676828  T
Q  227 tattattaagaaat 240  Q
    | || |||||||||    
T  29676829 ttttcttaagaaat 29676842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 203
Target Start/End: Original strand, 41739966 - 41740039
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    ||||||||||| |||| |||||| ||| ||||||| ||||||| || ||||||  |||||||||||||||||||    
T  41739966 tcttgaaatatgaaaattcaaatttaacacacatacaaacaaaggataatttggtaatattaacacacaaaata 41740039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 239
Target Start/End: Complemental strand, 48309557 - 48309449
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattat 229  Q
    ||||||||||| ||||||||||| ||| ||||||| ||||||| || |||||   |||||||||| |||||||| | | | ||||||||||||||| | |    
T  48309557 tcttgaaatatgaaaagtcaaatttaacacacatacaaacaaaggataattttgtaatattaacatacaaaatagaca-cataattgcactaacaacttt 48309459  T
Q  230 tattaagaaa 239  Q
    | ||||||||    
T  48309458 tcttaagaaa 48309449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 39931997 - 39931921
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    ||||||| |||||| |||| | |||| ||||||||||| |||||||||||||||| | ||  |||||||||||||||    
T  39931997 ttgtcttaaaatatgaaaactaaaatttaatacacatacaaacaaatgacaatttaataaccttaacacacaaaata 39931921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 42891535 - 42891419
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaat 226  Q
    ||||||| |||| | ||||||||||| ||||| ||||| ||||||| |||| ||||  ||||||||||||||||| | | |  ||||||  ||||||||     
T  42891535 ttgtctttaaatttgaaaagtcaaatttaatatacatacaaacaaaggacagtttggtaatattaacacacaaaacagacaaattaattatactaacaac 42891436  T
Q  227 tattattaagaaatgtg 243  Q
    | || ||||||||||||    
T  42891435 ttttcttaagaaatgtg 42891419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 243
Target Start/End: Complemental strand, 11394005 - 11393922
Alignment:
Q  160 acatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattattattaagaaatgtg 243  Q
    ||||||||| |||||||||||||| | ||||||||||||||||| | |  |||||| ||||||||| | || |||| |||||||    
T  11394005 acatataaataaatgacaatttgatagtattaacacacaaaatagacacattaattacactaacaactttttttaaaaaatgtg 11393922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 201
Target Start/End: Original strand, 13084363 - 13084422
Alignment:
Q  142 aaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||||||||| ||||||||||| ||||||| || ||||||  |||||||||||||||||    
T  13084363 aaaagtcaaatttaatacacatacaaacaaaagataatttggtaatattaacacacaaaa 13084422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 243
Target Start/End: Original strand, 34055857 - 34055968
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattat 229  Q
    ||||||||||  ||||||||||  ||||| ||||| |||  ||||||||||| | ||||||||||||||||| | | || |||||| || | |||||| |    
T  34055857 tcttgaaatacgaaaagtcaaagttaatatacataaaaa--aatgacaatttcataatattaacacacaaaacagacatattaattacattgacaatttt 34055954  T
Q  230 tattaagaaatgtg 243  Q
    | ||||||||||||    
T  34055955 ttttaagaaatgtg 34055968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 25750628 - 25750567
Alignment:
Q  142 aaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    ||||||||||| ||||||||||| |||||||  |||| |||  |||||||||||||||||||    
T  25750628 aaaagtcaaatttaatacacatacaaacaaagaacaagttggtaatattaacacacaaaata 25750567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 44647883 - 44647838
Alignment:
Q  136 aatataaaaagtcaaatctaatacacatataaacaaatgacaattt 181  Q
    ||||| |||||||||||  |||||||||||||||||||||||||||    
T  44647883 aatatgaaaagtcaaattaaatacacatataaacaaatgacaattt 44647838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 205
Target Start/End: Complemental strand, 48581441 - 48581356
Alignment:
Q  120 tattaatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaa 205  Q
    |||||| |||||| ||||||| |||| |||||| ||||||||||| ||| ||| || | ||||  |||||||| ||||||||||||    
T  48581441 tattaacttgtctggaaatatgaaaaatcaaatttaatacacataaaaataaaggatagtttgttaatattaatacacaaaataaa 48581356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 224
Target Start/End: Original strand, 54555910 - 54556011
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaa 222  Q
    ||||||||||| || ||| |||||| |||  ||||| |||||||||||||||| ||||||  || ||||||| | |||||| | || |||||| ||||||    
T  54555910 taatttgtcttaaagtatgaaaagttaaaattaatatacatataaacaaatgataatttggtaaaattaacatataaaatagacatattaattacactaa 54556009  T
Q  223 ca 224  Q
    ||    
T  54556010 ca 54556011  T

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Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 28229281 - 28229205
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    ||||||| |||||| ||||||||||| ||||| ||||| ||| ||| |||||||||  |||||||| ||| ||||||    
T  28229281 ttgtcttaaaatattaaaagtcaaatttaatatacatacaaataaaggacaatttggtaatattaatacataaaata 28229205  T

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Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 227
Target Start/End: Original strand, 33411970 - 33412063
Alignment:
Q  132 ttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaatt 227  Q
    ||||||||| ||||| ||||| |||||||  || ||| |||  ||||||||  ||||||||||||||||||| | |  ||||||||||||||||||    
T  33411970 ttgaaatatgaaaagacaaatttaataca--tacaaagaaaaaacaatttggtaatattaacacacaaaatagacacattaattgcactaacaatt 33412063  T

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Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 35145348 - 35145280
Alignment:
Q  126 tttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaaca 194  Q
    ||||||||||||||| ||||||||||| ||||||| ||| ||||||| || |||||   ||||||||||    
T  35145348 tttgtcttgaaatatgaaaagtcaaatttaatacaaatacaaacaaaggataatttcgtaatattaaca 35145280  T

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Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 41825127 - 41825203
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    ||||||| |||||| ||| ||||||| | ||||||||| ||||||| || ||||||  |||||||||||| ||||||    
T  41825127 ttgtcttaaaatatgaaatgtcaaatttgatacacatacaaacaaaagataatttggtaatattaacacataaaata 41825203  T

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Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 243
Target Start/End: Original strand, 46435727 - 46435836
Alignment:
Q  132 ttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattatta 231  Q
    ||||||| | ||||||||||| |||||||  || ||||||| |||||||||  ||||||||||||||||| | | |  |||||| |||| |||| | ||     
T  46435727 ttgaaatttgaaaagtcaaatttaataca--tacaaacaaaggacaatttggtaatattaacacacaaaacagacacattaattacactgacaacttttc 46435824  T
Q  232 ttaagaaatgtg 243  Q
    ||||||||||||    
T  46435825 ttaagaaatgtg 46435836  T

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Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 127 - 170
Target Start/End: Original strand, 5504565 - 5504608
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaaca 170  Q
    |||||||||||||| ||||||||||| ||||||||||| |||||    
T  5504565 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaaca 5504608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 31474544 - 31474466
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    ||||||||||| |||| | ||||   |||| ||||||||||| |||||||||| ||||| | ||||||||| |||||||    
T  31474544 taatttgtcttaaaatttgaaaaactaaatttaatacacatacaaacaaatgataatttaataatattaacgcacaaaa 31474466  T

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Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 31826308 - 31826242
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaac 193  Q
    |||||||| |||||| ||| |||||| ||||||||||| |||||||  |||||| || |||||||||    
T  31826308 ttgtcttgcaatatacaaaatcaaatttaatacacatacaaacaaagaacaattagataatattaac 31826242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 50092784 - 50092710
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||||||||||| ||||| ||| | ||||||||||| ||| ||| ||||||||   |||||||| ||||||||    
T  50092784 ttgtcttgaaatatgaaaagacaattttaatacacatacaaataaaggacaattttgtaatattaatacacaaaa 50092710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 11344673 - 11344598
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    |||| |||||||||||||| |||||| ||||||||||| ||| |||  | ||||||  ||| |||||||||||||||    
T  11344673 ttgtattgaaatataaaaaatcaaatttaatacacatacaaa-aaagaataatttggtaatgttaacacacaaaata 11344598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 243
Target Start/End: Original strand, 31650683 - 31650771
Alignment:
Q  155 aatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattattattaagaaatgtg 243  Q
    |||| ||||| ||| |||||||||||||  ||||||| |||| |||||| | |  ||||||||| |||||||| || |||| |||||||    
T  31650683 aatatacatacaaataaatgacaatttggtaatattaccacataaaatagacacattaattgcattaacaattttttttaataaatgtg 31650771  T

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Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 46202301 - 46202341
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacat 163  Q
    |||||| ||||||||| ||||||||||||| ||||||||||    
T  46202301 taatttatcttgaaatttaaaaagtcaaatttaatacacat 46202341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 130 - 243
Target Start/End: Complemental strand, 214732 - 214619
Alignment:
Q  130 tcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattat 229  Q
    |||| |||||||||||||||||| ||||||||||| |||||||||||||||||  |||||||||||| ||| || | |  |||||| ||||||||| | |    
T  214732 tcttaaaatataaaaagtcaaatttaatacacatacaaacaaatgacaatttggtaatattaacacaaaaactagacacattaattacactaacaacttt 214633  T
Q  230 tattaagaaatgtg 243  Q
    | ||||||||||||    
T  214632 tcttaagaaatgtg 214619  T

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Target: scaffold1091 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1091
Description:

Target: scaffold1091; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 243
Target Start/End: Original strand, 1897 - 2017
Alignment:
Q  123 taatttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaa 222  Q
    |||||||||||| ||||| ||||||||||| ||||||||||| ||||||| || ||||||  ||||||||||||||||||| | |  |||||| ||||||    
T  1897 taatttgtcttgcaatatgaaaagtcaaatttaatacacatacaaacaaaggataatttggtaatattaacacacaaaatagacacattaattacactaa 1996  T
Q  223 caattattattaagaaatgtg 243  Q
    ||| |  | ||||||||||||    
T  1997 caacttatcttaagaaatgtg 2017  T

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Target: scaffold0013 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 242
Target Start/End: Complemental strand, 49258 - 49138
Alignment:
Q  123 taatttgtcttgaaatat-aaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcacta 221  Q
    |||||||| ||||||||| |||||||||||| ||||| ||||  |||||||||||||||| | |||||||||||||||| || | || |||||| || ||    
T  49258 taatttgttttgaaatatgaaaaagtcaaatttaataaacatgcaaacaaatgacaatttaataatattaacacacaaagtagacatattaattacatta 49159  T
Q  222 acaattattattaagaaatgt 242  Q
    |||||| || |||||||||||    
T  49158 acaatttttcttaagaaatgt 49138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 201
Target Start/End: Original strand, 61285 - 61344
Alignment:
Q  142 aaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaa 201  Q
    |||||| |||| ||||||||||||||| ||| |||||||| | |||||||||||||||||    
T  61285 aaaagttaaatttaatacacatataaataaaggacaatttaataatattaacacacaaaa 61344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 127 - 243
Target Start/End: Original strand, 38464 - 38581
Alignment:
Q  127 ttgtcttgaaatat-aaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaa 225  Q
    |||||||||||||| |||||||||||| ||||| ||||| ||||||  || ||| ||  ||||||||||||||||||| | |  ||||||  ||||||||    
T  38464 ttgtcttgaaatatgaaaaagtcaaatttaataaacataaaaacaatggataatatggtaatattaacacacaaaatagacacattaattatactaacaa 38563  T
Q  226 ttattattaagaaatgtg 243  Q
    || |||||||||||||||    
T  38564 tttttattaagaaatgtg 38581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 238
Target Start/End: Complemental strand, 18791 - 18695
Alignment:
Q  142 aaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaatatcttaattgcactaacaattattattaagaa 238  Q
    ||||||||||| ||| ||||||| |||||||||||||||||  ||||||||| ||||||||||| |  ||||||||| |||||| | || |||||||    
T  18791 aaaagtcaaatttaaaacacatagaaacaaatgacaatttggtaatattaacccacaaaataaacaaattaattgcattaacaactttttttaagaa 18695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 99805 - 99881
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaata 203  Q
    |||||||||||||| ||||||||||| ||||||||||  ||||||| ||||||||   |||||||||||||||||||    
T  99805 ttgtcttgaaatatgaaaagtcaaatttaatacacattcaaacaaaagacaatttcgtaatattaacacacaaaata 99881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0699 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0699
Description:

Target: scaffold0699; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 7694 - 7640
Alignment:
Q  127 ttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaattt 181  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||    
T  7694 ttgtcttgaaatatgaaaagtcaaatttaatacacatataaacaaaggacaattt 7640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 205
Target Start/End: Original strand, 23638 - 23716
Alignment:
Q  126 tttgtcttgaaatataaaaagtcaaatctaatacacatataaacaaatgacaatttgagaatattaacacacaaaataaa 205  Q
    |||||||| |||| | |||| |||||| ||||||||||| ||| |||  ||||||||| |||||||||| ||||||||||    
T  23638 tttgtcttcaaatgtgaaaaatcaaatttaatacacatacaaa-aaagaacaatttgataatattaacatacaaaataaa 23716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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