View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6022_low_24 (Length: 221)

Name: NF6022_low_24
Description: NF6022
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6022_low_24
NF6022_low_24
[»] chr1 (82 HSPs)
chr1 (17-117)||(32632593-32632693)
chr1 (17-117)||(34725134-34725233)
chr1 (17-117)||(35253223-35253322)
chr1 (17-117)||(46247989-46248090)
chr1 (17-117)||(11596534-11596634)
chr1 (18-117)||(18724582-18724682)
chr1 (17-117)||(38478318-38478417)
chr1 (18-117)||(41319843-41319943)
chr1 (19-114)||(30395764-30395862)
chr1 (17-114)||(46991828-46991926)
chr1 (17-117)||(14617059-14617160)
chr1 (17-117)||(12126873-12126972)
chr1 (17-117)||(18944664-18944767)
chr1 (17-117)||(19414460-19414559)
chr1 (17-97)||(31382250-31382330)
chr1 (25-117)||(47214532-47214623)
chr1 (25-114)||(23768364-23768454)
chr1 (24-117)||(10668246-10668342)
chr1 (24-117)||(27201668-27201764)
chr1 (17-117)||(22930105-22930204)
chr1 (17-117)||(27474302-27474402)
chr1 (17-117)||(35005144-35005247)
chr1 (17-117)||(35117802-35117905)
chr1 (17-117)||(45812573-45812672)
chr1 (24-114)||(6925124-6925215)
chr1 (18-117)||(2435823-2435924)
chr1 (25-114)||(20004134-20004226)
chr1 (25-117)||(25468307-25468400)
chr1 (25-114)||(45402118-45402210)
chr1 (24-117)||(44485152-44485246)
chr1 (17-117)||(6983847-6983946)
chr1 (18-86)||(21910686-21910754)
chr1 (30-117)||(33223005-33223093)
chr1 (17-75)||(4349702-4349760)
chr1 (35-117)||(31272429-31272511)
chr1 (17-117)||(8197064-8197165)
chr1 (26-117)||(17470390-17470483)
chr1 (24-117)||(50811960-50812055)
chr1 (42-106)||(22324925-22324989)
chr1 (17-117)||(20036241-20036343)
chr1 (26-117)||(23371145-23371236)
chr1 (17-71)||(15505632-15505686)
chr1 (25-96)||(23796507-23796579)
chr1 (27-74)||(10378781-10378828)
chr1 (43-113)||(50760288-50760359)
chr1 (24-117)||(19974117-19974211)
chr1 (17-75)||(19932789-19932849)
chr1 (17-94)||(21723728-21723805)
chr1 (35-114)||(4430080-4430160)
chr1 (42-117)||(22327120-22327196)
chr1 (17-96)||(34148996-34149076)
chr1 (27-117)||(45264445-45264537)
chr1 (30-117)||(9939482-9939572)
chr1 (17-98)||(15511184-15511269)
chr1 (17-117)||(19701591-19701693)
chr1 (26-114)||(27136696-27136786)
chr1 (25-75)||(18742001-18742053)
chr1 (29-117)||(35019251-35019340)
chr1 (17-104)||(39214994-39215083)
chr1 (38-117)||(24564365-24564445)
chr1 (24-75)||(31442432-31442484)
chr1 (25-73)||(43768205-43768253)
chr1 (24-107)||(30682845-30682927)
chr1 (27-86)||(1517357-1517418)
chr1 (17-75)||(42304243-42304303)
chr1 (26-117)||(18335333-18335425)
chr1 (17-87)||(20999886-20999957)
chr1 (71-117)||(2435984-2436030)
chr1 (20-58)||(4249482-4249520)
chr1 (20-58)||(4249806-4249844)
chr1 (20-58)||(4250130-4250168)
chr1 (36-97)||(34679274-34679336)
chr1 (25-75)||(6358185-6358236)
chr1 (17-99)||(20169125-20169208)
chr1 (25-94)||(43207539-43207610)
chr1 (50-97)||(44745854-44745900)
chr1 (33-75)||(46859130-46859173)
chr1 (28-62)||(4430046-4430080)
chr1 (38-117)||(52910238-52910319)
chr1 (28-84)||(10158253-10158310)
chr1 (42-94)||(19656167-19656220)
chr1 (60-117)||(25290184-25290244)
[»] chr4 (79 HSPs)
chr4 (17-114)||(5648260-5648357)
chr4 (17-117)||(5306700-5306800)
chr4 (17-117)||(6430662-6430762)
chr4 (17-114)||(40915830-40915927)
chr4 (16-117)||(47528565-47528665)
chr4 (24-117)||(48598868-48598960)
chr4 (17-117)||(9832349-9832448)
chr4 (17-117)||(30639378-30639478)
chr4 (17-116)||(47443956-47444056)
chr4 (25-117)||(17043438-17043531)
chr4 (17-117)||(20224982-20225081)
chr4 (17-117)||(29207934-29208033)
chr4 (17-97)||(7909317-7909397)
chr4 (17-95)||(49796818-49796896)
chr4 (17-117)||(35567168-35567269)
chr4 (25-117)||(41018838-41018930)
chr4 (17-115)||(16911562-16911663)
chr4 (28-117)||(19027846-19027936)
chr4 (25-117)||(54175061-54175155)
chr4 (17-117)||(25463120-25463221)
chr4 (17-117)||(11054184-11054283)
chr4 (19-114)||(16408639-16408737)
chr4 (17-98)||(20639694-20639777)
chr4 (37-117)||(39077852-39077931)
chr4 (17-117)||(30690212-30690320)
chr4 (25-107)||(8473666-8473747)
chr4 (28-117)||(37494849-37494939)
chr4 (16-117)||(47441565-47441667)
chr4 (17-117)||(7385512-7385613)
chr4 (25-114)||(21646965-21647057)
chr4 (24-117)||(30496365-30496457)
chr4 (25-117)||(49938637-49938727)
chr4 (17-91)||(51865074-51865149)
chr4 (26-103)||(9987879-9987957)
chr4 (17-114)||(14983835-14983933)
chr4 (18-95)||(25629069-25629147)
chr4 (17-115)||(30581501-30581602)
chr4 (19-113)||(32478829-32478918)
chr4 (32-117)||(14590835-14590922)
chr4 (17-103)||(21489099-21489187)
chr4 (17-117)||(44363166-44363269)
chr4 (17-117)||(23501791-23501888)
chr4 (56-117)||(42164224-42164285)
chr4 (19-87)||(13256437-13256508)
chr4 (17-115)||(54730249-54730351)
chr4 (18-117)||(54967019-54967118)
chr4 (25-111)||(10277801-10277886)
chr4 (24-117)||(32629312-32629405)
chr4 (34-117)||(487187-487272)
chr4 (42-113)||(25343189-25343261)
chr4 (17-115)||(39029096-39029196)
chr4 (17-67)||(20908672-20908723)
chr4 (18-105)||(36589753-36589842)
chr4 (57-117)||(17315375-17315435)
chr4 (17-116)||(30352616-30352727)
chr4 (19-71)||(20225119-20225173)
chr4 (19-92)||(20405109-20405186)
chr4 (24-114)||(55766509-55766600)
chr4 (24-114)||(55830764-55830855)
chr4 (17-117)||(7038051-7038152)
chr4 (118-171)||(45962217-45962271)
chr4 (71-117)||(54640430-54640476)
chr4 (17-85)||(3580876-3580945)
chr4 (26-106)||(17079696-17079777)
chr4 (57-117)||(43035246-43035307)
chr4 (19-84)||(48327801-48327869)
chr4 (33-117)||(49938490-49938575)
chr4 (27-75)||(12711495-12711543)
chr4 (42-117)||(23580269-23580345)
chr4 (44-103)||(51420586-51420646)
chr4 (26-117)||(10660402-10660496)
chr4 (26-117)||(10874547-10874641)
chr4 (35-117)||(10379997-10380079)
chr4 (22-75)||(4222069-4222122)
chr4 (24-75)||(35894504-35894556)
chr4 (17-52)||(38786673-38786708)
chr4 (21-72)||(2813169-2813222)
chr4 (72-117)||(41549380-41549425)
chr4 (25-74)||(16494259-16494310)
[»] chr2 (58 HSPs)
chr2 (17-117)||(12023955-12024055)
chr2 (17-114)||(8455352-8455450)
chr2 (17-114)||(14444730-14444827)
chr2 (17-113)||(22371059-22371153)
chr2 (17-114)||(25249774-25249871)
chr2 (17-117)||(21779297-21779396)
chr2 (17-116)||(9671180-9671278)
chr2 (17-117)||(10546160-10546262)
chr2 (17-117)||(10543696-10543799)
chr2 (17-114)||(17623565-17623663)
chr2 (17-114)||(17668003-17668101)
chr2 (24-98)||(36871510-36871584)
chr2 (16-117)||(24200658-24200762)
chr2 (17-117)||(14530316-14530419)
chr2 (17-117)||(25641500-25641600)
chr2 (18-117)||(23397764-23397862)
chr2 (26-117)||(5450283-5450376)
chr2 (20-116)||(19977753-19977850)
chr2 (17-117)||(21377109-21377210)
chr2 (25-117)||(32781332-32781425)
chr2 (31-114)||(11514437-11514521)
chr2 (19-117)||(23145736-23145835)
chr2 (19-117)||(23557526-23557625)
chr2 (27-117)||(99311-99400)
chr2 (17-116)||(17896258-17896359)
chr2 (17-114)||(25079753-25079852)
chr2 (17-117)||(27573619-27573719)
chr2 (17-116)||(17380273-17380372)
chr2 (17-117)||(4516387-4516488)
chr2 (19-114)||(5841029-5841127)
chr2 (31-94)||(30826058-30826121)
chr2 (26-114)||(39914350-39914440)
chr2 (17-95)||(40762270-40762349)
chr2 (25-117)||(33795283-33795376)
chr2 (46-117)||(7214532-7214604)
chr2 (17-117)||(19614990-19615092)
chr2 (37-117)||(2003592-2003674)
chr2 (44-114)||(17705496-17705567)
chr2 (17-114)||(24860024-24860120)
chr2 (17-94)||(30864453-30864530)
chr2 (17-117)||(26684656-26684759)
chr2 (31-114)||(40416921-40417005)
chr2 (17-106)||(15296442-15296533)
chr2 (20-75)||(25632550-25632605)
chr2 (42-117)||(29419946-29420026)
chr2 (25-117)||(44643520-44643614)
chr2 (26-116)||(12315697-12315787)
chr2 (17-75)||(24890452-24890510)
chr2 (24-114)||(13245138-13245220)
chr2 (25-117)||(44521417-44521510)
chr2 (62-114)||(44604855-44604907)
chr2 (17-75)||(44449419-44449478)
chr2 (17-117)||(31821379-31821478)
chr2 (28-117)||(45235864-45235955)
chr2 (17-117)||(14544061-14544165)
chr2 (28-82)||(39499277-39499331)
chr2 (25-117)||(17471546-17471641)
chr2 (25-117)||(31158483-31158578)
[»] chr8 (52 HSPs)
chr8 (17-114)||(13160703-13160800)
chr8 (17-117)||(12670286-12670385)
chr8 (17-114)||(36720797-36720895)
chr8 (24-114)||(45071266-45071356)
chr8 (17-114)||(28817662-28817760)
chr8 (17-117)||(30454133-30454232)
chr8 (17-116)||(17823575-17823675)
chr8 (17-114)||(44530150-44530248)
chr8 (17-109)||(5135325-5135418)
chr8 (17-117)||(18164796-18164896)
chr8 (17-117)||(39461030-39461133)
chr8 (25-114)||(26954133-26954226)
chr8 (17-99)||(29877110-29877193)
chr8 (25-116)||(2626518-2626613)
chr8 (25-114)||(29521729-29521819)
chr8 (17-114)||(35261680-35261778)
chr8 (17-117)||(20869536-20869633)
chr8 (17-111)||(24365095-24365191)
chr8 (17-117)||(20284105-20284210)
chr8 (17-117)||(31457171-31457271)
chr8 (27-114)||(6760823-6760913)
chr8 (19-114)||(7136565-7136663)
chr8 (17-114)||(8897800-8897898)
chr8 (17-117)||(21070733-21070839)
chr8 (24-117)||(23000262-23000353)
chr8 (20-106)||(5689640-5689727)
chr8 (17-113)||(12625891-12625989)
chr8 (17-117)||(42083734-42083836)
chr8 (28-116)||(389642-389733)
chr8 (26-117)||(35105921-35106014)
chr8 (25-111)||(8483982-8484069)
chr8 (19-114)||(25250523-25250621)
chr8 (24-117)||(22598155-22598249)
chr8 (17-94)||(19729363-19729439)
chr8 (42-117)||(44781567-44781643)
chr8 (17-104)||(17250911-17251001)
chr8 (26-97)||(20869941-20870015)
chr8 (60-114)||(28407417-28407471)
chr8 (17-117)||(14018004-14018106)
chr8 (31-89)||(23286375-23286432)
chr8 (25-91)||(43942348-43942417)
chr8 (27-114)||(44742564-44742653)
chr8 (26-99)||(10857844-10857919)
chr8 (17-117)||(11748297-11748400)
chr8 (17-117)||(11000985-11001087)
chr8 (19-89)||(16225045-16225118)
chr8 (29-69)||(26457776-26457816)
chr8 (18-117)||(36918122-36918222)
chr8 (55-117)||(30962847-30962910)
chr8 (17-55)||(26102578-26102616)
chr8 (17-117)||(24245449-24245548)
chr8 (18-75)||(30231367-30231425)
[»] chr7 (69 HSPs)
chr7 (17-117)||(21172045-21172144)
chr7 (17-117)||(10693109-10693208)
chr7 (17-117)||(42391136-42391235)
chr7 (24-116)||(2541062-2541155)
chr7 (17-117)||(32758259-32758358)
chr7 (25-117)||(33871954-33872046)
chr7 (17-116)||(18512489-18512588)
chr7 (24-117)||(19265813-19265906)
chr7 (24-116)||(27629633-27629726)
chr7 (19-114)||(47716460-47716558)
chr7 (17-114)||(7879639-7879737)
chr7 (17-117)||(11617624-11617725)
chr7 (17-117)||(48735158-48735258)
chr7 (17-117)||(34626244-34626344)
chr7 (17-96)||(38604546-38604625)
chr7 (19-114)||(42805525-42805623)
chr7 (19-114)||(46354195-46354293)
chr7 (31-116)||(19426939-19427025)
chr7 (26-115)||(23419719-23419809)
chr7 (17-114)||(42798670-42798768)
chr7 (17-114)||(40463878-40463975)
chr7 (18-117)||(14099043-14099143)
chr7 (18-117)||(14409060-14409160)
chr7 (17-117)||(32233171-32233271)
chr7 (17-117)||(18747484-18747586)
chr7 (28-117)||(48123531-48123621)
chr7 (25-117)||(28362189-28362282)
chr7 (24-117)||(31591152-31591244)
chr7 (26-115)||(42476873-42476961)
chr7 (24-117)||(43557470-43557566)
chr7 (18-117)||(47077892-47077990)
chr7 (31-105)||(2662985-2663058)
chr7 (17-117)||(29907417-29907519)
chr7 (26-117)||(7644954-7645047)
chr7 (24-117)||(11741793-11741885)
chr7 (17-114)||(28078168-28078265)
chr7 (17-117)||(13805100-13805200)
chr7 (17-103)||(1408469-1408556)
chr7 (24-117)||(16341276-16341371)
chr7 (24-99)||(35787312-35787386)
chr7 (17-111)||(15108433-15108527)
chr7 (21-114)||(38262236-38262330)
chr7 (17-117)||(19266448-19266549)
chr7 (17-114)||(35334852-35334948)
chr7 (17-98)||(23231574-23231656)
chr7 (36-117)||(6736888-6736969)
chr7 (25-111)||(8148989-8149077)
chr7 (42-117)||(12473302-12473378)
chr7 (58-114)||(18327035-18327091)
chr7 (17-111)||(21566439-21566535)
chr7 (21-117)||(35203437-35203536)
chr7 (61-117)||(42495916-42495972)
chr7 (31-117)||(22699018-22699107)
chr7 (17-109)||(39123896-39123994)
chr7 (21-84)||(21139788-21139851)
chr7 (17-64)||(27889352-27889399)
chr7 (21-94)||(22065609-22065682)
chr7 (42-117)||(5180218-5180294)
chr7 (17-117)||(14732857-14732959)
chr7 (31-117)||(44123672-44123758)
chr7 (59-114)||(7794582-7794640)
chr7 (17-104)||(42101920-42102009)
chr7 (43-114)||(1423972-1424044)
chr7 (73-117)||(7193083-7193127)
chr7 (24-75)||(17048858-17048910)
chr7 (34-94)||(23604553-23604612)
chr7 (26-117)||(3469220-3469316)
chr7 (17-73)||(33500556-33500614)
chr7 (17-63)||(36267853-36267900)
[»] chr5 (53 HSPs)
chr5 (17-117)||(32703422-32703521)
chr5 (26-114)||(41014320-41014408)
chr5 (17-116)||(8170020-8170118)
chr5 (17-114)||(24448891-24448989)
chr5 (24-117)||(35710311-35710403)
chr5 (17-117)||(27328750-27328853)
chr5 (17-117)||(38879579-38879682)
chr5 (17-117)||(43334200-43334304)
chr5 (24-105)||(19142986-19143067)
chr5 (19-114)||(4619142-4619240)
chr5 (17-91)||(7097796-7097870)
chr5 (17-98)||(7368415-7368495)
chr5 (17-112)||(43574609-43574705)
chr5 (29-117)||(22907913-22908001)
chr5 (17-92)||(2838802-2838877)
chr5 (19-106)||(13801805-13801895)
chr5 (17-117)||(1850638-1850738)
chr5 (17-115)||(208963-209062)
chr5 (51-117)||(37024626-37024691)
chr5 (19-96)||(20135623-20135703)
chr5 (17-95)||(29334415-29334495)
chr5 (17-117)||(1565429-1565531)
chr5 (24-90)||(16880690-16880757)
chr5 (24-114)||(22600455-22600546)
chr5 (25-111)||(41425952-41426039)
chr5 (17-114)||(1405188-1405286)
chr5 (25-117)||(28516477-28516571)
chr5 (17-70)||(34154850-34154903)
chr5 (18-117)||(39301121-39301222)
chr5 (17-117)||(34074598-34074699)
chr5 (58-117)||(22025541-22025601)
chr5 (42-117)||(22187283-22187359)
chr5 (42-117)||(42924895-42924971)
chr5 (24-94)||(5873365-5873435)
chr5 (17-117)||(22861705-22861803)
chr5 (17-97)||(12575696-12575779)
chr5 (25-104)||(24323749-24323829)
chr5 (25-104)||(24360373-24360453)
chr5 (24-75)||(3771380-3771431)
chr5 (56-114)||(23974781-23974840)
chr5 (17-66)||(11657735-11657785)
chr5 (24-117)||(30006323-30006417)
chr5 (25-117)||(12006372-12006467)
chr5 (17-56)||(16957374-16957413)
chr5 (24-65)||(12477163-12477205)
chr5 (27-74)||(9794424-9794471)
chr5 (24-98)||(24903739-24903814)
chr5 (42-113)||(31299634-31299705)
chr5 (49-117)||(18698609-18698675)
chr5 (30-66)||(3176803-3176839)
chr5 (24-117)||(24313616-24313712)
chr5 (24-117)||(24355953-24356049)
chr5 (20-83)||(37226000-37226064)
[»] chr6 (44 HSPs)
chr6 (17-117)||(1346962-1347061)
chr6 (17-117)||(1354793-1354892)
chr6 (17-117)||(29355891-29355994)
chr6 (17-117)||(12221951-12222054)
chr6 (17-117)||(9161121-9161223)
chr6 (20-115)||(28007628-28007722)
chr6 (18-117)||(2166447-2166549)
chr6 (18-117)||(2178080-2178182)
chr6 (17-97)||(26097178-26097257)
chr6 (18-117)||(3815114-3815214)
chr6 (17-97)||(25557743-25557822)
chr6 (24-117)||(7947414-7947509)
chr6 (17-117)||(15866075-15866174)
chr6 (26-115)||(18277238-18277328)
chr6 (27-117)||(23240870-23240959)
chr6 (17-110)||(33138838-33138932)
chr6 (17-117)||(13905016-13905116)
chr6 (25-105)||(32579436-32579516)
chr6 (48-117)||(8409241-8409311)
chr6 (17-116)||(15865893-15865992)
chr6 (30-91)||(1941879-1941941)
chr6 (18-117)||(12889424-12889525)
chr6 (27-115)||(14553511-14553602)
chr6 (17-117)||(24097579-24097676)
chr6 (19-114)||(6024234-6024332)
chr6 (18-117)||(20400665-20400765)
chr6 (21-105)||(11849063-11849149)
chr6 (17-91)||(9671120-9671196)
chr6 (71-114)||(14975171-14975214)
chr6 (27-114)||(22967172-22967265)
chr6 (27-114)||(23821128-23821221)
chr6 (61-117)||(17432338-17432395)
chr6 (51-117)||(17448322-17448389)
chr6 (27-78)||(18254556-18254607)
chr6 (71-117)||(12063465-12063511)
chr6 (25-94)||(12228379-12228449)
chr6 (45-75)||(14341134-14341164)
chr6 (26-98)||(19340845-19340918)
chr6 (17-59)||(23930163-23930205)
chr6 (24-75)||(24734683-24734736)
chr6 (36-117)||(32728211-32728293)
chr6 (17-53)||(13267788-13267824)
chr6 (20-75)||(24751112-24751168)
chr6 (28-116)||(32068095-32068182)
[»] chr3 (67 HSPs)
chr3 (17-117)||(1217110-1217209)
chr3 (24-114)||(22609789-22609879)
chr3 (28-117)||(26869727-26869816)
chr3 (17-117)||(13628826-13628929)
chr3 (17-117)||(22122953-22123052)
chr3 (17-114)||(40272848-40272946)
chr3 (17-115)||(46421071-46421172)
chr3 (17-117)||(26573147-26573248)
chr3 (24-111)||(16735467-16735554)
chr3 (17-108)||(31592878-31592968)
chr3 (24-117)||(34420686-34420781)
chr3 (17-115)||(29366756-29366857)
chr3 (17-91)||(47624088-47624162)
chr3 (17-117)||(33926103-33926204)
chr3 (24-117)||(39203536-39203628)
chr3 (25-113)||(6411866-6411954)
chr3 (17-117)||(8247723-8247826)
chr3 (19-114)||(13730640-13730738)
chr3 (17-109)||(10795459-10795554)
chr3 (25-116)||(12914079-12914171)
chr3 (17-97)||(54484730-54484812)
chr3 (34-117)||(45620881-45620966)
chr3 (17-117)||(30928183-30928284)
chr3 (31-114)||(4495714-4495798)
chr3 (39-115)||(7696945-7697020)
chr3 (31-114)||(54032609-54032693)
chr3 (54-117)||(10870025-10870088)
chr3 (17-88)||(15797271-15797341)
chr3 (25-117)||(516429-516525)
chr3 (17-114)||(45948874-45948972)
chr3 (25-117)||(53996609-53996703)
chr3 (17-117)||(54374381-54374483)
chr3 (24-105)||(14986989-14987073)
chr3 (25-117)||(45139520-45139615)
chr3 (17-114)||(52926255-52926344)
chr3 (19-94)||(49013511-49013589)
chr3 (17-91)||(45786250-45786327)
chr3 (17-74)||(34771400-34771457)
chr3 (30-117)||(52428526-52428615)
chr3 (24-117)||(5173762-5173857)
chr3 (25-117)||(9607223-9607318)
chr3 (28-114)||(7943013-7943100)
chr3 (25-117)||(25944489-25944583)
chr3 (25-117)||(19731022-19731115)
chr3 (25-117)||(19751598-19751691)
chr3 (17-88)||(9276313-9276384)
chr3 (27-117)||(8410913-8411002)
chr3 (30-99)||(31904906-31904976)
chr3 (31-104)||(43114918-43114994)
chr3 (27-105)||(55401208-55401288)
chr3 (19-75)||(353387-353445)
chr3 (24-96)||(25517213-25517287)
chr3 (18-115)||(44403592-44403691)
chr3 (56-117)||(12525427-12525489)
chr3 (17-87)||(26292382-26292451)
chr3 (38-95)||(31831241-31831297)
chr3 (29-119)||(33235549-33235641)
chr3 (47-117)||(39212010-39212081)
chr3 (17-92)||(829478-829555)
chr3 (26-98)||(50624998-50625071)
chr3 (33-99)||(31672731-31672798)
chr3 (41-108)||(21875042-21875111)
chr3 (64-117)||(53062058-53062112)
chr3 (42-117)||(1121286-1121362)
chr3 (28-115)||(29106571-29106659)
chr3 (40-117)||(26782386-26782464)
chr3 (71-113)||(35417940-35417982)
[»] scaffold0168 (1 HSPs)
scaffold0168 (17-117)||(30577-30676)
[»] scaffold0258 (1 HSPs)
scaffold0258 (25-117)||(13068-13160)
[»] scaffold0187 (2 HSPs)
scaffold0187 (17-117)||(10086-10185)
scaffold0187 (17-117)||(20414-20513)
[»] scaffold0223 (1 HSPs)
scaffold0223 (17-117)||(11129-11228)
[»] scaffold0057 (3 HSPs)
scaffold0057 (17-114)||(46832-46930)
scaffold0057 (17-90)||(24808-24882)
scaffold0057 (28-95)||(43679-43745)
[»] scaffold0015 (1 HSPs)
scaffold0015 (17-94)||(48670-48746)
[»] scaffold0049 (1 HSPs)
scaffold0049 (25-117)||(58975-59070)
[»] scaffold0036 (1 HSPs)
scaffold0036 (26-114)||(35062-35152)
[»] scaffold1176 (1 HSPs)
scaffold1176 (19-117)||(1625-1722)
[»] scaffold0311 (1 HSPs)
scaffold0311 (17-114)||(10811-10909)
[»] scaffold0254 (1 HSPs)
scaffold0254 (18-117)||(4155-4258)
[»] scaffold0005 (1 HSPs)
scaffold0005 (32-117)||(226456-226543)
[»] scaffold0954 (1 HSPs)
scaffold0954 (17-98)||(3561-3643)
[»] scaffold0180 (1 HSPs)
scaffold0180 (17-68)||(24169-24220)
[»] scaffold0167 (1 HSPs)
scaffold0167 (25-117)||(23597-23690)
[»] scaffold0018 (1 HSPs)
scaffold0018 (24-111)||(72910-72999)
[»] scaffold0031 (1 HSPs)
scaffold0031 (33-117)||(43127-43210)
[»] scaffold0867 (1 HSPs)
scaffold0867 (31-111)||(3719-3798)
[»] scaffold0050 (1 HSPs)
scaffold0050 (47-87)||(58702-58742)


Alignment Details
Target: chr1 (Bit Score: 93; Significance: 2e-45; HSPs: 82)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 32632593 - 32632693
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  32632593 cagggtttgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacctttc 32632692  T
Q  117 a 117  Q
    |    
T  32632693 a 32632693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 34725134 - 34725233
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  34725134 cagggtccgggaaggggtcccaccatttagtgtattgtacgcagccttaccctg-ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 34725232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 35253223 - 35253322
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||| |||||    
T  35253223 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagaggctgtttcgaggacttgaacccgtgatctttc 35253321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 46247989 - 46248090
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgaccttt 115  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||| |||||||||||| |||    
T  46247989 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttccaagacttgaacccgtgacattt 46248088  T
Q  116 ca 117  Q
    ||    
T  46248089 ca 46248090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 11596634 - 11596534
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||| ||||    
T  11596634 cagggtccaggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttttacacaagaggttgtttctaggacttgaacccgtgacatttc 11596535  T
Q  117 a 117  Q
    |    
T  11596534 a 11596534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 18724582 - 18724682
Alignment:
Q  18 agggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    ||||| |||||||||||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  18724582 agggtccgggaaggggtcccaagatttggtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttc 18724681  T
Q  117 a 117  Q
    |    
T  18724682 a 18724682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 38478318 - 38478417
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| || |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||    
T  38478318 cagggtccgagaaggggttccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagaggctgtttctaggacttgaacccgtgacctttc 38478416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 41319843 - 41319943
Alignment:
Q  18 agggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| | |||| ||||||||||    
T  41319843 agggttcgggaaggggtcccatcatttggtgtattgtacgcagccttaccctgttttttacacaagagactgtttccaggacttaaacctgtgacctttc 41319942  T
Q  117 a 117  Q
    |    
T  41319943 a 41319943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 19 - 114
Target Start/End: Original strand, 30395764 - 30395862
Alignment:
Q  19 gggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  30395764 gggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctt 30395862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 46991926 - 46991828
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||| |||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  46991926 cagggtccgggaaggggtcccaccattcggtgtattgtacacagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgacctt 46991828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 14617160 - 14617059
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtt-tttacacaagaggctgtttccaggacatgaacccgtgaccttt 115  Q
    |||||| ||||||||| |||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||| ||||| ||||||||||    
T  14617160 cagggtccgggaagggatcccaccatttggtgtattgtacgcaaccttaccttgttatttacacaagaggctgtttccaggacttgaactcgtgaccttt 14617061  T
Q  116 ca 117  Q
    ||    
T  14617060 ca 14617059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 12126873 - 12126972
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||| || | |||||||||||||||    
T  12126873 cagggtccgggaaggggtcccacaatttggtgtattgtacgcagccttaccctg-ttttacacaagaagctgtttccagaacttaaacccgtgacctttc 12126971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 18944767 - 18944664
Alignment:
Q  17 cagggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacct 113  Q
    |||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||| |||||||    
T  18944767 cagggtccgggaaggggtcccaccattgttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggccttgaacctgtgacct 18944668  T
Q  114 ttca 117  Q
    ||||    
T  18944667 ttca 18944664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 19414559 - 19414460
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||| |||| ||||| |||||||||||||||||    
T  19414559 cagggtacgggaaggggtcccaccatttggtgtattgtacgcagccttaacctg-ttttacataagaggctctttctaggacttgaacccgtgacctttc 19414461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 31382250 - 31382330
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccagga 97  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  31382250 cagggtccaggaaggggtcccaccatttggtgtattgtacgcagccttatcctgtttttacacaagaggctgtttccagga 31382330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 47214623 - 47214532
Alignment:
Q  25 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||| ||||||||||||| ||||||||||||||||||    
T  47214623 gggaaggggtcccaccatttggtgtattgtacgcaaccttaccctg-ttttaaacaagagactgtttccaggacttgaacccgtgacctttca 47214532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 25 - 114
Target Start/End: Original strand, 23768364 - 23768454
Alignment:
Q  25 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||| ||||||||    
T  23768364 gggaaggtgtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccatgacttgaacctgtgacctt 23768454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 10668342 - 10668246
Alignment:
Q  24 cgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||||||||||||  |||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  10668342 cgggaaggggtcccaccattattggtgtattgtacgcaaccttaccttgttttttacacaagaggctgtttccaggacttgaacccgtgacctttca 10668246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 27201764 - 27201668
Alignment:
Q  24 cgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||    
T  27201764 cgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttctgacacaagaggctgtttccaggacttgaacccatgacctttca 27201668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 22930105 - 22930204
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| | ||||||||||||||||||||||||||||| | || ||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||    
T  22930105 cagggtccaggaaggggtcccaccatttggtgtattgt-cacaaccttaccctgtttttacacaaaaggctgtttccaggacttgaacccatgacctttc 22930203  T

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Target: chr1; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 27474402 - 27474302
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| ||||||||||||||||||||  |||||||||||||||| || ||||||||||||||||||| ||||||||| ||| |||||| ||||||||||    
T  27474402 cagggtccgggaaggggtcccaccattcagtgtattgtacgcagctttgccctgtttttacacaagagactgtttccaagacttgaacctgtgacctttc 27474303  T
Q  117 a 117  Q
    |    
T  27474302 a 27474302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 35005247 - 35005144
Alignment:
Q  17 cagggttcgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacct 113  Q
    |||||| |||||||||||||||||||||  ||||||||||| ||||||||||||||||||| |||||||||||||||| || ||| ||||||||||||||    
T  35005247 cagggtccgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgttttttacacaagaggctgttttcaagacttgaacccgtgacct 35005148  T
Q  114 ttca 117  Q
    ||||    
T  35005147 ttca 35005144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 35117802 - 35117905
Alignment:
Q  17 cagggttcgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacatgaacccgtgacct 113  Q
    |||||| ||||||||||||||| |||||  |||||||||||| |||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||    
T  35117802 cagggtccgggaaggggtcccatcatttttggtgtattgtacacagccttaccctgtattttacacaagaggctatttccaggacttgaacccgtgacct 35117901  T
Q  114 ttca 117  Q
    ||||    
T  35117902 ttca 35117905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 45812573 - 45812672
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||| |||||| |||||| |||||| ||||||||||    
T  45812573 cagggtttgggaaggggtcccaccatttggtgtattgtatgcagccttaccct-cttttacacaagagactgttttcaggacttgaacctgtgacctttc 45812671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 114
Target Start/End: Complemental strand, 6925215 - 6925124
Alignment:
Q  24 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-gtttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||  ||||||||||||||||| |||||||||| |||||||||||||||    
T  6925215 cgggaaggggtcccaccattcggtgtattgtccgcagccttaccctattttttacacaagaggctatttccaggacttgaacccgtgacctt 6925124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 2435823 - 2435924
Alignment:
Q  18 agggttcgggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgaccttt 115  Q
    ||||| ||| ||||||||||||||||| |||||||||||||||| |||||||| ||||| ||||| ||||||||||||||||| ||||||||||||||||    
T  2435823 agggtacggaaaggggtcccaccattttggtgtattgtacgcaggcttaccctatttttcacacaggaggctgtttccaggacttgaacccgtgaccttt 2435922  T
Q  116 ca 117  Q
    ||    
T  2435923 ca 2435924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 25 - 114
Target Start/End: Original strand, 20004134 - 20004226
Alignment:
Q  25 gggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||||||||||||||||  |||||||||||||||||||||||| ||||||| |||| |||||||||||||||||| |||||||||||||||    
T  20004134 gggaaggggtcccaccattattggtgtattgtacgcagccttaccttgttttttacacgagaggctgtttccaggacttgaacccgtgacctt 20004226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 25468307 - 25468400
Alignment:
Q  25 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||| ||||| |||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||| ||||||| ||||||||||    
T  25468307 gggaagaggtccaaccatttggtgtattgtacgcaaccttaccctgatttttacacaagaggttgtttccaggacttgaacccatgacctttca 25468400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 25 - 114
Target Start/End: Complemental strand, 45402210 - 45402118
Alignment:
Q  25 gggaaggggtcccaccatttggtgtattgtacgcagc-ctt--accctgtttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    ||||||||||||||||||||||||||||||||||||  |||  |||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  45402210 gggaaggggtcccaccatttggtgtattgtacgcagaacttgaaccctgtttttacacaagaggctgtttccaggacttgaacccgttacctt 45402118  T

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Target: chr1; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 44485152 - 44485246
Alignment:
Q  24 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||| || ||||||||||||   ||||||||||||||||    
T  44485152 cgggaaggggtccaaccatttggtgtattgtacgcagccttaccatgtcttttacacaagtggttgtttccaggactataacccgtgacctttca 44485246  T

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Target: chr1; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 6983847 - 6983946
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| ||| ||||||||||||||||||||||||||||||||  ||||||||||||||  | | ||||||||||||||||| |||||| ||||||||||    
T  6983847 cagggtccggaaaggggtcccaccatttggtgtattgtacgcatacttaccctgttttt-tatacgaggctgtttccaggacttgaacctgtgacctttc 6983945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 21910686 - 21910754
Alignment:
Q  18 agggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggc 86  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||    
T  21910686 agggttcgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctatttttacataagaggc 21910754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 33223093 - 33223005
Alignment:
Q  30 ggggtcccaccattt-ggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||| | || |||||||||||||    
T  33223093 ggggtcccaccattttggtgtattgtacgcaacctttccctgtttttacacaagaggctgtttccatgacttaaatccgtgacctttca 33223005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 4349760 - 4349702
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt 75  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4349760 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt 4349702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 31272429 - 31272511
Alignment:
Q  35 cccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||||||| |||||| |||||||||||    
T  31272429 cccaccatttgatgtgctgtacgcagccttaccatgtttttacacaagaggttgtttccaggacttgaacctgtgacctttca 31272511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 8197165 - 8197064
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgaccttt 115  Q
    |||||| || |||||||||| ||||||||||||| |||||| ||||||||| || ||||||||||||||||  || ||||||| ||||||||||||||||    
T  8197165 cagggtccgagaaggggtcctaccatttggtgtactgtacgtagccttaccatgttttttacacaagaggcaattaccaggacttgaacccgtgaccttt 8197066  T
Q  116 ca 117  Q
    ||    
T  8197065 ca 8197064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 17470390 - 17470483
Alignment:
Q  26 ggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||| ||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||| ||||| ||||    
T  17470390 ggaacgggtcccactattttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttctaggacttgaacccatgaccattca 17470483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 50812055 - 50811960
Alignment:
Q  24 cgggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgttttt--acacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||||| ||||||| ||||||||||||||| |||||||||||||||  |||||||| ||||||||||||||||||  |||||||||||||    
T  50812055 cgggaaggggtcc-accattttggtgtattgtacgcaaccttaccctgtttttttacacaagaagctgtttccaggacatgattccgtgacctttca 50811960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 42 - 106
Target Start/End: Complemental strand, 22324989 - 22324925
Alignment:
Q  42 tttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaaccc 106  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  22324989 tttggtgtattgtatgcagccttaccctgtttttacacaagaggctgtttccaagacttgaaccc 22324925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 20036343 - 20036241
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttt--ttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||| ||||||||||| |||||||||||||||||| |||||  |||||||| | |  |||||||||||  |||||||||||| |||||||||||||||    
T  20036343 cagggtccgggaaggggttccaccatttggtgtattgaacgcaatcttaccctttctctttacacaagagtttgtttccaggacttgaacccgtgacctt 20036244  T
Q  115 tca 117  Q
    |||    
T  20036243 tca 20036241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 23371236 - 23371145
Alignment:
Q  26 ggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||||| ||||||||||||||||| || |||| |||  ||||||| |||| ||||||||| ||||| ||||||||||||||||||    
T  23371236 ggaaggggtcccagcatttggtgtattgtacacaaccttgcccgttttttacccaagtggctgtttctaggacttgaacccgtgacctttca 23371145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 15505686 - 15505632
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt 71  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15505686 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgt 15505632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 23796579 - 23796507
Alignment:
Q  25 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccagg 96  Q
    ||||||||||| ||||||||||||||||||||||| ||||||  || ||||||||||||||||||||||||||    
T  23796579 gggaaggggtctcaccatttggtgtattgtacgcaaccttacattgatttttacacaagaggctgtttccagg 23796507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 10378781 - 10378828
Alignment:
Q  27 gaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10378781 gaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 10378828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 113
Target Start/End: Original strand, 50760288 - 50760359
Alignment:
Q  43 ttggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggacatgaacccgtgacct 113  Q
    |||||||||| ||||||||||||||| ||||| ||||||||||||||||| |||||| ||||||||||||||    
T  50760288 ttggtgtattatacgcagccttacccagttttatacacaagaggctgttttcaggacttgaacccgtgacct 50760359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 19974117 - 19974211
Alignment:
Q  24 cgggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||| |||||||| ||||| ||||||||||||||| |||| |||| |||||||||  ||||||||||||| ||| ||||||||||| ||||||    
T  19974117 cgggaatgggtcccatcattttggtgtattgtacgcaaccttgccctatttttacacttgaggctgtttccaagacttgaacccgtgatctttca 19974211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 19932789 - 19932849
Alignment:
Q  17 cagggttcgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgttttt 75  Q
    |||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  19932789 cagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttt 19932849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 21723805 - 21723728
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttcca 94  Q
    |||||| ||||||  ||| | ||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||    
T  21723805 cagggtccgggaaaaggttctaccatttggtgtattgtactcagccttaccctatttttatacaagaggctgtttcca 21723728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 4430080 - 4430160
Alignment:
Q  35 cccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||  |||||| || ||| | |||||||||||||    
T  4430080 cccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagatactgttttcaagacttaaacccgtgacctt 4430160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 22327196 - 22327120
Alignment:
Q  42 tttggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||| || |||| |||||||||||||||||| |||||||||| |||||||||||| |||||||| |||||||||    
T  22327196 tttggtgcatcgtacacagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgcgacctttca 22327120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 34148996 - 34149076
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccagg 96  Q
    |||||| | |||||||||| ||||||||||| | ||||||||| ||||||||| |||| ||||||||||||||||||||||    
T  34148996 cagggtccaggaaggggtctcaccatttggtcttttgtacgcaaccttaccctattttctacacaagaggctgtttccagg 34149076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 27 - 117
Target Start/End: Original strand, 45264445 - 45264537
Alignment:
Q  27 gaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgttttta-cacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||||||| ||||||||| || ||||||||| ||||||||  ||||||||| |||||||||||| |||||  |||||||||||    
T  45264445 gaaggggtcccaccattttggtgtattgcacacagccttactctgttttttgcacaagaggttgtttccaggacttgaacatgtgacctttca 45264537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 9939572 - 9939482
Alignment:
Q  30 ggggtcccaccattt--ggtgtattgtacgcagccttaccctgttt-ttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||||  ||||||||| ||||| ||||||| ||||| ||| |||||||| |||||||||||| ||||| ||||||||||||    
T  9939572 ggggtcccaccatttttggtgtattgcacgcaaccttaccatgtttcttaaacaagaggttgtttccaggacttgaactcgtgacctttca 9939482  T

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Target: chr1; HSP #54
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 15511184 - 15511269
Alignment:
Q  17 cagggttcgggaaggggtcccaccattt-ggtgtattgta--cgcagccttaccctgtttt-tacacaagaggctgtttccaggac 98  Q
    |||||| | ||||||||| ||||||||| |||||||||||  ||||||||||||||||||| |||||||||||| |||||||||||    
T  15511184 cagggtccaggaaggggtaccaccattttggtgtattgtatccgcagccttaccctgttttttacacaagaggcggtttccaggac 15511269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 19701693 - 19701591
Alignment:
Q  17 cagggttcgggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||| |||||||||| |||||||||| |||||||||||| || |||||||  |||||| |||||||||||||||| || ||| | |||||||||| ||    
T  19701693 cagggtccgggaaggggccccaccattttggtgtattgtacccatccttaccaagttttttacacaagaggctgttttcatgacttaaacccgtgacatt 19701594  T
Q  115 tca 117  Q
    |||    
T  19701593 tca 19701591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 114
Target Start/End: Original strand, 27136696 - 27136786
Alignment:
Q  26 ggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    ||||||||||||||||||| ||||||||||||||| ||||||| || ||||||||||||||| |||| |||| || ||||| |||| ||||    
T  27136696 ggaaggggtcccaccattttggtgtattgtacgcaaccttaccatgttttttacacaagaggttgttcccagaacttgaactcgtgtcctt 27136786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 18742001 - 18742053
Alignment:
Q  25 gggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgttttt 75  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  18742001 gggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttt 18742053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 29 - 117
Target Start/End: Complemental strand, 35019340 - 35019251
Alignment:
Q  29 aggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||||| ||||||||||||| |||||||||  ||| |||||| |||||||| ||||| |||||| |||| | |||||||||||    
T  35019340 aggggtcccaccaattggtgtattgtatgcagccttatactgatttttatacaagaggttgtttacaggacttgaatctgtgacctttca 35019251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 39214994 - 39215083
Alignment:
Q  17 cagggttcgggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaac 104  Q
    ||||||| ||||||||| |||||||||| ||  |||||||||||||||||||| | ||||||||||||||| ||||||||| || |||||    
T  39214994 cagggtttgggaaggggacccaccattttggaatattgtacgcagccttacccagttttttacacaagaggttgtttccagtacttgaac 39215083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 24564445 - 24564365
Alignment:
Q  38 accatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||| |||||||||| ||||||||||| |||||||||||||| |||||||| ||| |||| | | |||||||||    
T  24564445 accatttggtgaattgtacgcacccttaccctgttttttacacaagaggttgtttccaagacttgaatctgcgacctttca 24564365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 31442432 - 31442484
Alignment:
Q  24 cgggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgttttt 75  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  31442432 cgggaaggggtcccaccattttggtgtattgtacgcatccttaccctgttttt 31442484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 43768253 - 43768205
Alignment:
Q  25 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttt 73  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  43768253 gggaaggggtcccaccaattggtgtattgtaggcagccttaccctgttt 43768205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 30682927 - 30682845
Alignment:
Q  24 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccg 107  Q
    |||||||||||||||||||||| ||||| |||| ||  |||||| ||||||||||||||||||| ||| |||||  ||||||||    
T  30682927 cgggaaggggtcccaccatttgttgtat-gtacacaatcttaccttgtttttacacaagaggctattttcaggatttgaacccg 30682845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 86
Target Start/End: Original strand, 1517357 - 1517418
Alignment:
Q  27 gaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt--acacaagaggc 86  Q
    ||||||||||||||| ||||||||||||||||||||||| | |||||||  |||||||||||    
T  1517357 gaaggggtcccaccaattggtgtattgtacgcagccttatcatgttttttaacacaagaggc 1517418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 42304243 - 42304303
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttg--gtgtattgtacgcagccttaccctgttttt 75  Q
    |||||| |||||||||||||||||||||   |||||||||||||| |||||||||||||||    
T  42304243 cagggtccgggaaggggtcccaccattttttgtgtattgtacgcaaccttaccctgttttt 42304303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 18335333 - 18335425
Alignment:
Q  26 ggaaggggtcccaccatttggtgtattgtacgcagccttaccct-gtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||| |||||||| |||||| ||||||||||||| | |||||||  |||||| ||||||| ||||||||||||| | |||  |||||||||||    
T  18335333 ggaaagggtcccatcatttgatgtattgtacgcaactttaccctaatttttaaacaagagactgtttccaggactttaacttgtgacctttca 18335425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 20999886 - 20999957
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggct 87  Q
    |||||| | |||||||| |||| ||||||||||||||||||||||||| || || |||||||||||| ||||    
T  20999886 cagggtgccggaaggggccccatcatttggtgtattgtacgcagccttgccttgttttttacacaagtggct 20999957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 117
Target Start/End: Original strand, 2435984 - 2436030
Alignment:
Q  71 tttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||| |||| |||||||||||| ||||||||||||||||||    
T  2435984 tttttacacaggaggttgtttccaggacttgaacccgtgacctttca 2436030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 4249482 - 4249520
Alignment:
Q  20 ggttcgggaaggggtcccaccatttggtgtattgtacgc 58  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  4249482 ggttcgggaagggatcccaccatttggtgtattgtacgc 4249520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 4249806 - 4249844
Alignment:
Q  20 ggttcgggaaggggtcccaccatttggtgtattgtacgc 58  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  4249806 ggttcgggaagggatcccaccatttggtgtattgtacgc 4249844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 4250130 - 4250168
Alignment:
Q  20 ggttcgggaaggggtcccaccatttggtgtattgtacgc 58  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  4250130 ggttcgggaagggatcccaccatttggtgtattgtacgc 4250168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 34679274 - 34679336
Alignment:
Q  36 ccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccagga 97  Q
    |||||||||| ||||| |||||||| ||||||||| ||||||||||||||| |||||| ||||    
T  34679274 ccaccatttgatgtatagtacgcagtcttaccctgttttttacacaagaggttgtttctagga 34679336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 75
Target Start/End: Complemental strand, 6358236 - 6358185
Alignment:
Q  25 gggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgttttt 75  Q
    |||||||||||||||||||| ||||| ||||||||||| |||||||| ||||    
T  6358236 gggaaggggtcccaccattttggtgttttgtacgcagctttaccctgatttt 6358185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 20169125 - 20169208
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggaca 99  Q
    |||||| |||||||| ||||||||  |||| ||||||||| ||| |||||| | |||| ||||||||||| ||||| |||||||    
T  20169125 cagggtccgggaaggagtcccaccgattggggtattgtacacagtcttacctttttttttacacaagagggtgttttcaggaca 20169208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 43207610 - 43207539
Alignment:
Q  25 gggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttcca 94  Q
    |||||| |||||||||| |||||||||||||| || | |||||||||||||| ||| |||||| ||||||||    
T  43207610 gggaagaggtcccaccaatttggtgtattgtatgccgtcttaccctgtttttcacataagaggttgtttcca 43207539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 97
Target Start/End: Original strand, 44745854 - 44745900
Alignment:
Q  50 attgtacgcagccttaccctgtttttacacaagaggctgtttccagga 97  Q
    |||||||||||| ||||| |||||| ||||||||||||||||||||||    
T  44745854 attgtacgcagctttaccttgtttt-acacaagaggctgtttccagga 44745900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 75
Target Start/End: Complemental strand, 46859173 - 46859130
Alignment:
Q  33 gtcccaccattt-ggtgtattgtacgcagccttaccctgttttt 75  Q
    |||||||||||| |||||||||||||||| ||||||||||||||    
T  46859173 gtcccaccattttggtgtattgtacgcagtcttaccctgttttt 46859130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 4430046 - 4430080
Alignment:
Q  28 aaggggtcccaccatttggtgtattgtacgcagcc 62  Q
    ||||||| |||||||||||||||||||||||||||    
T  4430046 aaggggttccaccatttggtgtattgtacgcagcc 4430080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 52910319 - 52910238
Alignment:
Q  38 accatttggtgtattgtacgcagccttaccctgtttttacac--aagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||| |||||||||||| ||| | ||||||||||||  ||  ||||||||||||||| ||  |||||| |||||||||||    
T  52910319 accattaggtgtattgtacacagtcctaccctgtttttttacctaagaggctgtttccaagagttgaacctgtgacctttca 52910238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 10158310 - 10158253
Alignment:
Q  28 aaggggtcccaccatttggtgtattgtacgcagccttaccctgtt-tttacacaagag 84  Q
    ||||||| |||||||||||||||||||||| ||| |||| ||||| |||||| |||||    
T  10158310 aaggggtgccaccatttggtgtattgtacgtagcattactctgttgtttacataagag 10158253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 94
Target Start/End: Original strand, 19656167 - 19656220
Alignment:
Q  42 tttggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttcca 94  Q
    |||||||||||||||  ||| ||||| |||||| ||||||||||||||||||||    
T  19656167 tttggtgtattgtacatagcgttaccatgttttttacacaagaggctgtttcca 19656220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 25290244 - 25290184
Alignment:
Q  60 gccttaccctgttttt-acacaagaggctgt--ttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||||| ||||||||||||||  ||||| ||| ||||| ||||||||||||    
T  25290244 gccttaccctgttttttacacaagaggctgtgtttccaagacttgaacacgtgacctttca 25290184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 1e-43; HSPs: 79)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 5648357 - 5648260
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  5648357 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacctt 5648260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 5306700 - 5306800
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  5306700 cagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgattttacacaagaggctgtttccaggacttgaacccgtgacctttc 5306799  T
Q  117 a 117  Q
    |    
T  5306800 a 5306800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 6430662 - 6430762
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  6430662 cagggtccgggaagtggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccatgacttgaacccgtgacctttc 6430761  T
Q  117 a 117  Q
    |    
T  6430762 a 6430762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 40915927 - 40915830
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  40915927 cagggtccgggaagggctcccaccatttggtgtattgtacgcagccttaccttgtttttacacaagaggctgtttccaggacttgaacccgtgacctt 40915830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 47528565 - 47528665
Alignment:
Q  16 tcagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgaccttt 115  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||    
T  47528565 tcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagaggctgtttccaggacttgaacctgtgaccttt 47528663  T
Q  116 ca 117  Q
    ||    
T  47528664 ca 47528665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 48598868 - 48598960
Alignment:
Q  24 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  48598868 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagaggctgtttccaggacttgaacccgtgacctttca 48598960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 9832349 - 9832448
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||    
T  9832349 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagaggctgttttcaggacttgaacccgtgacctttc 9832447  T

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Target: chr4; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 30639478 - 30639378
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||    
T  30639478 cagggtccgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttttacacaagagtctgtttccaggacttgaaccagtgacctttc 30639379  T
Q  117 a 117  Q
    |    
T  30639378 a 30639378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 47444056 - 47443956
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacatgaacccgtgaccttt 115  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||    
T  47444056 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacgcaagaggctgtttccaggacttgaacccgtgaccttt 47443957  T
Q  116 c 116  Q
    |    
T  47443956 c 47443956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 17043438 - 17043531
Alignment:
Q  25 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||    
T  17043438 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtattttacacaagaggctgtttccaggacttgaacctgtgacctttca 17043531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 20225081 - 20224982
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||| |||||||||    
T  20225081 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagaggttgtttccaggacttgaacccatgacctttc 20224983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 29207934 - 29208033
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||| |||||||||||||||||    
T  29207934 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagaggcaatttccaggacttgaacccgtgacctttc 29208032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 7909317 - 7909397
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccagga 97  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  7909317 cagggttcgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgtttttacacaagagactgtttccagga 7909397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 49796896 - 49796818
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccag 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  49796896 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccatgttttaacacaagaggctgtttccag 49796818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 35567269 - 35567168
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacatgaacccgtgaccttt 115  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||| ||||||||||| ||| ||||||| ||||||||    
T  35567269 cagggttcgggaaggggtcccaccatttggtgtgttgtacacagccttaccctgttttttacacaagtggctgtttccaagacttgaacccatgaccttt 35567170  T
Q  116 ca 117  Q
    ||    
T  35567169 ca 35567168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 41018838 - 41018930
Alignment:
Q  25 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||  |||||||||||||| |||||||||||| ||||||||||||||||||    
T  41018838 gggaaggggtcccactatttggtgtattgtacgtagccttaccctaattttacacaagaggttgtttccaggacttgaacccgtgacctttca 41018930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 17 - 115
Target Start/End: Complemental strand, 16911663 - 16911562
Alignment:
Q  17 cagggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggacatgaacccgtgacct 113  Q
    |||||| ||||||||||||||||||||  ||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||| ||||||||||||||    
T  16911663 cagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgatttgtacacaagaggctgtttctaggacttgaacccgtgacct 16911564  T
Q  114 tt 115  Q
    ||    
T  16911563 tt 16911562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 19027936 - 19027846
Alignment:
Q  28 aaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| | |||||||||||| ||||||||||||||||||    
T  19027936 aaggggtcccaccaattggtgtattgtacgcagccttaccctgttttttacacaagatgttgtttccaggacttgaacccgtgacctttca 19027846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 54175155 - 54175061
Alignment:
Q  25 gggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgtttttacacaagaggctg-tttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||| |||||    
T  54175155 gggaaggggtcccaccattttggtgtattgtacgcagccttaccctgtttttacacaagaggctgttttccaggacttgaatccgtgacatttca 54175061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 25463221 - 25463120
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgaccttt 115  Q
    |||||| |||||||||||||||||||||||||| ||||||||| |||| ||| |||||| |||||||||| |||||||||||| ||||||||||||||||    
T  25463221 cagggtccgggaaggggtcccaccatttggtgtgttgtacgcaacctttcccagttttttacacaagaggttgtttccaggacttgaacccgtgaccttt 25463122  T
Q  116 ca 117  Q
    ||    
T  25463121 ca 25463120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 11054184 - 11054283
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| ||||||||||| || |||||||||||||||||||||| ||||||||| ||||||||||||| |||||| |||||| |||||||||||||||||    
T  11054184 cagggtccgggaaggggttccgccatttggtgtattgtacgcagtcttaccctg-ttttacacaagagactgttttcaggacttgaacccgtgacctttc 11054282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 114
Target Start/End: Original strand, 16408639 - 16408737
Alignment:
Q  19 gggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||| ||||||||||| ||||||||  ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  16408639 gggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctt 16408737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 20639694 - 20639777
Alignment:
Q  17 cagggttcgggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggac 98  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20639694 cagggtccgggaaggggtcccaccattttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggac 20639777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 39077852 - 39077931
Alignment:
Q  37 caccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  39077852 caccatttggtatattgtacgcaaccttaccctgtttt-acacaagaggctgtttccaggacttgaacccgtgacctttca 39077931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 30690212 - 30690320
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--------tttttacacaagaggctgtttccaggacatgaacccgt 108  Q
    |||||| |||||||||||||||||| ||||||||||||| ||||||||||||||        ||||||||||||||||| |||||||||| |||||||||    
T  30690212 cagggtccgggaaggggtcccaccaattggtgtattgtatgcagccttaccctgttttttattttttacacaagaggctttttccaggacttgaacccgt 30690311  T
Q  109 gacctttca 117  Q
    |||||||||    
T  30690312 gacctttca 30690320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 8473666 - 8473747
Alignment:
Q  25 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccg 107  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||  ||||||||||||||||||||||| ||||||||    
T  8473666 gggaaggggtcccaccatttggtgtattgtatgcagccttaccctg-ttaaacacaagaggctgtttccaggacttgaacccg 8473747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 37494939 - 37494849
Alignment:
Q  28 aaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||||||||| ||||||| ||| ||||||||||| |||||||||||||| |||||||||||| |||||| |||||||||||    
T  37494939 aaggggtcccaccatttggtatattgtatgcaaccttaccctgttttttacacaagaggttgtttccaggacttgaacctgtgacctttca 37494849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 47441565 - 47441667
Alignment:
Q  16 tcagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    ||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||| ||||| |||||||  |||| |||||| ||||||||    
T  47441565 tcagggtccgggaaggggtccaaccatttggtgtattgtacacagccttaccctgatttttacaaaagagactgtttcttggacttgaacctgtgacctt 47441664  T
Q  115 tca 117  Q
    |||    
T  47441665 tca 47441667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 7385512 - 7385613
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-gtttttacacaagaggctgtttccaggacatgaacccgtgaccttt 115  Q
    |||||| |||||| ||||||||||||||||||||||| || || |||||||||  |||||||||| ||||||||||||||| | ||||||||||||||||    
T  7385512 cagggtccgggaaagggtcccaccatttggtgtattgcacacaaccttaccctattttttacacatgaggctgtttccagggcttgaacccgtgaccttt 7385611  T
Q  116 ca 117  Q
    ||    
T  7385612 ca 7385613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 25 - 114
Target Start/End: Complemental strand, 21647057 - 21646965
Alignment:
Q  25 gggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||||||||||||||||  |||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||| ||||||||    
T  21647057 gggaaggggtcccaccattattggtatattgtacgcagccttaccctattttttacacaagaggctgtttccaggacttgaacctgtgacctt 21646965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 30496365 - 30496457
Alignment:
Q  24 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||| ||||| ||||||||||||||||| |||||||||||| || |||||||||||||||||||||| ||| ||||| ||||||||||||    
T  30496365 cgggaaggagtccccccatttggtgtattgtatgcagccttaccc-gtgtttacacaagaggctgtttccatgacttgaacacgtgacctttca 30496457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 49938637 - 49938727
Alignment:
Q  25 gggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||||||||| |||||||||||| |   ||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||    
T  49938637 gggaaggggtcccaccattttggtgtattgtacac---cttaccccgtttttacacaagaggctgtttccaggacttgaacctgtgacctttca 49938727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 51865074 - 51865149
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgttt 91  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  51865074 cagggtccgggaaggggccccaccatttggtgtattgtacgcagccttaccatgttttttacacaagaggctgttt 51865149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 26 - 103
Target Start/End: Original strand, 9987879 - 9987957
Alignment:
Q  26 ggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtt-tttacacaagaggctgtttccaggacatgaa 103  Q
    |||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||| |||||||||||| ||||    
T  9987879 ggaaggggtcccaccatttggtgtattgtatgcagccttaccctattgtttacacaagaggttgtttccaggacttgaa 9987957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 14983933 - 14983835
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-gtttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||| ||||||||||||||||||||| |||||||||| ||| |||||||||  |||||||||||||||||||||| | ||| |||| ||||||||||    
T  14983933 cagggtccgggaaggggtcccaccatttagtgtattgtaggcaaccttaccctattttttacacaagaggctgtttcaaagacttgaatccgtgacctt 14983835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 25629147 - 25629069
Alignment:
Q  18 agggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-gtttttacacaagaggctgtttccag 95  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||| ||||||||||    
T  25629147 agggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctattttttacacaagagactgtttccag 25629069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 17 - 115
Target Start/End: Original strand, 30581501 - 30581602
Alignment:
Q  17 cagggttcgggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgtttt--tacacaagaggctgtttccaggacatgaacccgtgacct 113  Q
    |||||| ||||||||||||||||||||| |||||||||||| || ||||||||||||||  ||||||||||| |||||||| ||| ||||||| ||||||    
T  30581501 cagggtccgggaaggggtcccaccattttggtgtattgtacacacccttaccctgtttttttacacaagaggttgtttccacgacttgaacccttgacct 30581600  T
Q  114 tt 115  Q
    ||    
T  30581601 tt 30581602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 32478829 - 32478918
Alignment:
Q  19 gggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacct 113  Q
    |||| |||||||||||||||||||||||||||||     |||||||||||||||||||||| ||||| |||||||||||| |||||| |||||||    
T  32478829 gggtccgggaaggggtcccaccatttggtgtatt-----cagccttaccctgtttttacactagaggttgtttccaggacttgaacctgtgacct 32478918  T

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Target: chr4; HSP #39
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 14590922 - 14590835
Alignment:
Q  32 ggtcccaccatttggtgtattgtacgcagccttaccctgt--ttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||| ||||||||| |||||||||||||||  ||||| ||||||||||||||| ||||| |||| |||||||||||||    
T  14590922 ggtcccaccatttgatgtattgtatgcagccttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtgacctttca 14590835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 21489187 - 21489099
Alignment:
Q  17 cagggttcgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaa 103  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||| ||||| ||| ||||||| |||||||||||||||||||| ||||    
T  21489187 cagggttcgggaaggggtcccaccattttggtgcattgtacgcagtcttactctgttttttacgcaagaggctgtttccaggacttgaa 21489099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 44363166 - 44363269
Alignment:
Q  17 cagggttcgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacct 113  Q
    |||||| |||||||||||||||||||||  ||||  |||||||||||| |||||||||||| ||||| |||||||||| |||||| ||||| ||||||||    
T  44363166 cagggtccgggaaggggtcccaccatttttggtgcgttgtacgcagccctaccctgttttttacacacgaggctgttttcaggacttgaactcgtgacct 44363265  T
Q  114 ttca 117  Q
    ||||    
T  44363266 ttca 44363269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 23501888 - 23501791
Alignment:
Q  17 cagggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacatgaacccgtgacct 113  Q
    |||||| ||||||||||||||||||||  |||||||||||||||| ||||||||||| ||||||||||||||||||      ||| ||||||||||||||    
T  23501888 cagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccctgttttttacacaagaggctgt------gacttgaacccgtgacct 23501795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 42164224 - 42164285
Alignment:
Q  56 cgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||    
T  42164224 cgcagccttaccctgtttttacacaagaggttgtttccaagacttgaacccgtgacctttca 42164285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 13256437 - 13256508
Alignment:
Q  19 gggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctg-tttttacacaagaggct 87  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||||||||||| |||||||||||||||||    
T  13256437 gggttcgggaaggggtcccactattattggtgtattgtacgcagccttaccctgttttttacacaagaggct 13256508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 17 - 115
Target Start/End: Complemental strand, 54730351 - 54730249
Alignment:
Q  17 cagggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgttttt--acacaagaggctgtttccaggacatgaacccgtgacc 112  Q
    |||||| ||||||||||| ||| ||||  ||||||||| |||||||||||| ||| |||||  ||||||||||||||||| ||||| |||||||||||||    
T  54730351 cagggtccgggaaggggttccatcattattggtgtattatacgcagccttatcctatttttttacacaagaggctgtttctaggacttgaacccgtgacc 54730252  T
Q  113 ttt 115  Q
    |||    
T  54730251 ttt 54730249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 54967118 - 54967019
Alignment:
Q  18 agggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    ||||| |||||||||||||||||||||||| ||||||| ||| |||||||||| ||||||||||||||| | ||||||| || |||||  ||||||||||    
T  54967118 agggtacgggaaggggtcccaccatttggtatattgta-gcaaccttaccctgttttttacacaagaggttctttccagaacttgaacatgtgacctttc 54967020  T

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Target: chr4; HSP #47
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 25 - 111
Target Start/End: Original strand, 10277801 - 10277886
Alignment:
Q  25 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgac 111  Q
    ||||||||||  ||||||||||||||||||||||||||||| |||  ||||| ||||||||||||||| ||||  ||||||||||||    
T  10277801 gggaaggggtttcaccatttggtgtattgtacgcagccttatcct-attttatacaagaggctgtttcaaggatttgaacccgtgac 10277886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 32629312 - 32629405
Alignment:
Q  24 cgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||| ||| |||||||||| ||| || ||||||||||||||||  ||||||||||||||| ||||  ||||||||||||||||||    
T  32629312 cgggaaggggtcccgccaatttggtgtat-gtaggcggccttaccctgtttttttacaagaggctgtttcgaggatttgaacccgtgacctttca 32629405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 487187 - 487272
Alignment:
Q  34 tcccaccatttg-gtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||  |||||||||||||||| ||||| |||||| ||||||||||| |||||||| ||| ||||||||||||||||||    
T  487187 tcccaccattttagtgtattgtacgcagctttaccttgttttatacacaagaggttgtttccaagacttgaacccgtgacctttca 487272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 42 - 113
Target Start/End: Complemental strand, 25343261 - 25343189
Alignment:
Q  42 tttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacatgaacccgtgacct 113  Q
    |||||||||||||||||||||||||||||| ||||||||||||| || ||||||| || |||||| |||||||    
T  25343261 tttggtgtattgtacgcagccttaccctgttttttacacaagagactatttccagaacttgaacctgtgacct 25343189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 17 - 115
Target Start/End: Original strand, 39029096 - 39029196
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttg-gtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||| ||| ||| |||||||||||||  ||||||||||| ||||||||||||| |||||||||||||||||||||||| | | ||||||  |||||||    
T  39029096 cagggtccggaaagtggtcccaccattttcgtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaaggcttgaacctatgacctt 39029195  T
Q  115 t 115  Q
    |    
T  39029196 t 39029196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 20908672 - 20908723
Alignment:
Q  17 cagggttcgggaaggggtcccacca-tttggtgtattgtacgcagccttacc 67  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  20908672 cagggttcgggaaggggtcccaccattttggtgtattgtacgcagccttacc 20908723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 36589842 - 36589753
Alignment:
Q  18 agggttcgggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacc 105  Q
    ||||||| ||||||||||||||||||| |||||| |||   |||| ||||| ||||||| ||||||||||||||||||||||| ||||||    
T  36589842 agggttcaggaaggggtcccaccattttggtgtactgtcaacagcattaccatgttttttacacaagaggctgtttccaggacttgaacc 36589753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 17315375 - 17315435
Alignment:
Q  57 gcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||| ||||||||||||||||| |||||| ||||  ||||||||||||||||||    
T  17315375 gcagccttaccttgtttttacacaagaggttgtttcgaggaattgaacccgtgacctttca 17315435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 30352616 - 30352727
Alignment:
Q  17 cagggttcgggaaggggtcccaccattt--ggtgtattgtacgcagc----cttaccctgtttt------tacacaagaggctgtttccaggacatgaac 104  Q
    |||||| || ||||||||||||||||||  |||||||||||||||||    |||||||||||||      ||||||||||||||||||||||||   |||    
T  30352616 cagggtccgagaaggggtcccaccatttttggtgtattgtacgcagctttacttaccctgtttttttttttacacaagaggctgtttccaggactctaac 30352715  T
Q  105 ccgtgacctttc 116  Q
    ||||||||||||    
T  30352716 ccgtgacctttc 30352727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 20225173 - 20225119
Alignment:
Q  19 gggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgt 71  Q
    |||| ||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  20225173 gggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgt 20225119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 20405186 - 20405109
Alignment:
Q  19 gggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgttttt--acacaagaggctgtttc 92  Q
    |||| ||||||||||||||||||||  | ||||||||||||||  ||||||||||||||  |||||||||||||||||    
T  20405186 gggtccgggaaggggtcccaccattattagtgtattgtacgcaatcttaccctgtttttttacacaagaggctgtttc 20405109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 24 - 114
Target Start/End: Original strand, 55766509 - 55766600
Alignment:
Q  24 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaa-cccgtgacctt 114  Q
    ||||| ||||| ||||||||  ||||||||||||||||||||||||||||  ||||||||  |||||||||  || |||| |||||||||||    
T  55766509 cgggatggggttccaccattcagtgtattgtacgcagccttaccctgtttacacacaagaaactgtttccaaaacttgaaccccgtgacctt 55766600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 24 - 114
Target Start/End: Original strand, 55830764 - 55830855
Alignment:
Q  24 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaac-ccgtgacctt 114  Q
    ||||| ||||| ||||||||  |||||||||||||||| |||||||||||  ||||||||| |||||||||  || ||||| ||||||||||    
T  55830764 cgggatggggttccaccattcagtgtattgtacgcagcattaccctgtttacacacaagagactgtttccaaaacttgaactccgtgacctt 55830855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 7038152 - 7038051
Alignment:
Q  17 cagggttcgggaaggggtcccaccattt-ggtgtattgtacgcagccttaccct-gtttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||| |||| ||| | |||||||||| ||||||||||||| || ||||||||  ||||||||||||| ||||||| |||||| |||||| ||||||||    
T  7038152 cagggtccgggtaggtgccccaccattttggtgtattgtacgaagtcttaccctattttttacacaagaagctgttt-caggacttgaacctgtgacctt 7038054  T
Q  115 tca 117  Q
    |||    
T  7038053 tca 7038051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 118 - 171
Target Start/End: Original strand, 45962217 - 45962271
Alignment:
Q  118 tgcaacgcttacatgaaaaccagtaaaa-tatgttcaaacatcaatatctatgag 171  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||    
T  45962217 tgcaacgctcacatgaaaaccagtaaaattatgttcaaacatcaatgtctatgag 45962271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 117
Target Start/End: Original strand, 54640430 - 54640476
Alignment:
Q  71 tttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||    
T  54640430 tttttacacaagaggctgtttccaagacttgaacccgtgacctttca 54640476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 3580876 - 3580945
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-gtttttacacaagagg 85  Q
    |||||| ||||||||||||| | |||||||||||||| || |||||||||| | ||||||||||||||||    
T  3580876 cagggtccgggaaggggtcctagcatttggtgtattgcacacagccttaccatggtttttacacaagagg 3580945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 106
Target Start/End: Original strand, 17079696 - 17079777
Alignment:
Q  26 ggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggacatgaaccc 106  Q
    |||| |||||||||||||| | |||||||| |||||||||||||||||| |||||||||   |||||||| ||| |||||||    
T  17079696 ggaaagggtcccaccatttagcgtattgtatgcagccttaccctgttttatacacaagatattgtttccaagacttgaaccc 17079777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 43035307 - 43035246
Alignment:
Q  57 gcagccttaccctgttt-ttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||| ||||| |||||||||||| ||||||| |||| ||||||||||||||||||    
T  43035307 gcagccttaccgtgtttcttacacaagaggttgtttcctggacttgaacccgtgacctttca 43035246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 48327801 - 48327869
Alignment:
Q  19 gggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctg-tttttacacaagag 84  Q
    |||||||||||| ||||||||||||  |||||||||||| |||| ||||||||| ||||||||||||||    
T  48327801 gggttcgggaagaggtcccaccattattggtgtattgtatgcagtcttaccctgttttttacacaagag 48327869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 49938490 - 49938575
Alignment:
Q  33 gtcccaccatttgg-tgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||| | || |||| ||||||||||||||||||||||||||| | |||| ||||| ||| |||| | |||||||||||    
T  49938490 gtcccaccattttgatgaattggacgcagccttaccctgtttttacacaatacgctgcttccaagacttgaatctgtgacctttca 49938575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 12711495 - 12711543
Alignment:
Q  27 gaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt 75  Q
    ||||||||||| |||||||||||||||||||||| |||||||| |||||    
T  12711495 gaaggggtcccgccatttggtgtattgtacgcagtcttaccctattttt 12711543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 23580269 - 23580345
Alignment:
Q  42 tttggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||  ||||||| ||| ||||||||| ||||||||||||| |||| || || ||||||||||||||||||    
T  23580269 tttggtgtatcctacgcagtcttcccctgttttttacacaagaggctctttctagaacttgaacccgtgacctttca 23580345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 51420646 - 51420586
Alignment:
Q  44 tggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggacatgaa 103  Q
    ||||||||||||| ||||||||||||||||| ||||||||||| |||||||| ||| ||||    
T  51420646 tggtgtattgtacccagccttaccctgttttctacacaagaggttgtttccatgacttgaa 51420586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 10660496 - 10660402
Alignment:
Q  26 ggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||| |||||||  |||||||||||| |||||| |||||| ||||| ||| |||||| |||||||||||| |||||  || ||||||||    
T  10660496 ggaaggggtctcaccattattggtgtattgtatgcagccataccctattttttacataagaggttgtttccaggacttgaacatgtaacctttca 10660402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 10874641 - 10874547
Alignment:
Q  26 ggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||| |||||||  |||||||||||| |||||| |||||| ||||| ||| |||||| |||||||||||| |||||  || ||||||||    
T  10874641 ggaaggggtctcaccattattggtgtattgtatgcagccataccctattttttacataagaggttgtttccaggacttgaacatgtaacctttca 10874547  T

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Target: chr4; HSP #73
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 10379997 - 10380079
Alignment:
Q  35 cccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||| |||||||||||||||||||   ||| ||| ||||||||||||||| |||||  ||||| |||||  |||||||||||    
T  10379997 cccactatttggtgtattgtacgcaattttatcctatttttacacaagaggttgtttgtaggacttgaacaagtgacctttca 10380079  T

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Target: chr4; HSP #74
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 4222069 - 4222122
Alignment:
Q  22 ttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt 75  Q
    |||||||||||||||||||| || ||||||| |||||||||||||  |||||||    
T  4222069 ttcgggaaggggtcccaccaatttgtgtattctacgcagccttactttgttttt 4222122  T

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Target: chr4; HSP #75
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 35894504 - 35894556
Alignment:
Q  24 cgggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgttttt 75  Q
    ||||||||||||||||||||| |||||||||||||||  |||||| |||||||    
T  35894504 cgggaaggggtcccaccattttggtgtattgtacgcacacttaccgtgttttt 35894556  T

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Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 38786708 - 38786673
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtatt 52  Q
    |||||| |||||||||||||||||||||||||||||    
T  38786708 cagggtccgggaaggggtcccaccatttggtgtatt 38786673  T

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Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 2813222 - 2813169
Alignment:
Q  21 gttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtt 72  Q
    ||||||||| |||||||||||||  || |||||||||||||| |||||||||||    
T  2813222 gttcgggaaagggtcccaccattattgatgtattgtacgcagtcttaccctgtt 2813169  T

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Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 117
Target Start/End: Complemental strand, 41549425 - 41549380
Alignment:
Q  72 ttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||| ||||||||| || |||||||||||| |||||    
T  41549425 ttttacacaagaggttgtttccagaacttgaacccgtgacatttca 41549380  T

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Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 16494310 - 16494259
Alignment:
Q  25 gggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgtttt 74  Q
    ||||| ||||||||||||||  ||||||||||| ||||| ||||||||||||    
T  16494310 gggaaagggtcccaccatttttggtgtattgtatgcagctttaccctgtttt 16494259  T

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Target: chr2 (Bit Score: 89; Significance: 5e-43; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 12023955 - 12024055
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12023955 cagggtccgggagggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacctttc 12024054  T
Q  117 a 117  Q
    |    
T  12024055 a 12024055  T

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Target: chr2; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 8455352 - 8455450
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  8455352 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtgttttacacaagaggctgtttccaggacttgaacccgtgacctt 8455450  T

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Target: chr2; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 14444827 - 14444730
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  14444827 cagggtccgggaaggggtcccaccatttggtgtatcgtacacagccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacctt 14444730  T

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Target: chr2; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 22371153 - 22371059
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacct 113  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||    
T  22371153 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacac--gaggctgtttccaggacttgaacccgtgacct 22371059  T

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Target: chr2; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 25249774 - 25249871
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||| |||||||||||||||    
T  25249774 cagggttcgggaagggatcccaccatttggtgtattgtacgcagccttaccctgtttgtacacaagagactgtttccatgacttgaacccgtgacctt 25249871  T

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Target: chr2; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 21779297 - 21779396
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||| |||||||||||||||||    
T  21779297 cagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctg-ttttacacaagaggctgtctccaggacttgaacccgtgacctttc 21779395  T

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Target: chr2; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 9671278 - 9671180
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||| ||||    
T  9671278 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagaggctgtttccaggatttgaacccgtgacatttc 9671180  T

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Target: chr2; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 10546262 - 10546160
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt--ttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||| |||||||||||||||    
T  10546262 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttttatacaagaggatgtttccaggacttgaacccgtgacctt 10546163  T
Q  115 tca 117  Q
    |||    
T  10546162 tca 10546160  T

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Target: chr2; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 10543799 - 10543696
Alignment:
Q  17 cagggttcgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacct 113  Q
    |||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||    
T  10543799 cagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttacacaagaggccgtttccaggacttgaacccgtgacct 10543700  T
Q  114 ttca 117  Q
    ||||    
T  10543699 ttca 10543696  T

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Target: chr2; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 17623663 - 17623565
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||| |||||||||||||||    
T  17623663 caggattcgggaaggggttccaccatttggtgtattgtacgcagccttaccctgatttttacacaagaggttgtttcgaggacttgaacccgtgacctt 17623565  T

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Target: chr2; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 17668101 - 17668003
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||| |||||||||||||||    
T  17668101 cagggttcgagaaggggttccaccatttggtgtattgtacgcagccttaccctgatttttacacaagaggttctttccaggacttgaacccgtgacctt 17668003  T

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Target: chr2; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 24 - 98
Target Start/End: Complemental strand, 36871584 - 36871510
Alignment:
Q  24 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggac 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  36871584 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttcacacaagaggctgtttccaggac 36871510  T

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Target: chr2; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 24200658 - 24200762
Alignment:
Q  16 tcagggttcgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggacatgaacccgtgacc 112  Q
    ||||||| ||||||||| |||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||     
T  24200658 tcagggtccgggaagggttcccaccatttttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgact 24200757  T
Q  113 tttca 117  Q
    |||||    
T  24200758 tttca 24200762  T

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Target: chr2; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 14530419 - 14530316
Alignment:
Q  17 cagggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacct 113  Q
    |||||| ||||||||||||||||||||  |||||||||||||| ||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||    
T  14530419 cagggtccgggaaggggtcccaccattattggtgtattgtacgtagccttaccctgttttttatacaagaggctgtttccaggacttgaacccgtgacct 14530320  T
Q  114 ttca 117  Q
    ||||    
T  14530319 ttca 14530316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 25641600 - 25641500
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||| |||||||||||||||||| ||||||||||||||||||| | |||||||||||| |||||| | |||||||||||||| |||||||||||||||||    
T  25641600 caggattcgggaaggggtcccacaatttggtgtattgtacgcaactttaccctgttttcacacaaaatgctgtttccaggacttgaacccgtgacctttc 25641501  T
Q  117 a 117  Q
    |    
T  25641500 a 25641500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 23397862 - 23397764
Alignment:
Q  18 agggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||| || ||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||| ||||||| ||||||||||    
T  23397862 agggtccgagaaggggtcccaccatttggtgtattgtacgtagccttaccct-attttacacaagaggctgtttccaggacttgaacccatgacctttca 23397764  T

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Target: chr2; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 5450376 - 5450283
Alignment:
Q  26 ggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--tttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||| |||||||||||  ||||||||||||||||||    
T  5450376 ggaaggggtcccaccctttggtgtattgtacgcagccttaccatgtttttttacacaagaggttgtttccaggaattgaacccgtgacctttca 5450283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 19977753 - 19977850
Alignment:
Q  20 ggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-gtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||| |||  |||||||| |||||||||||||||| || |||||||||||||||||    
T  19977753 ggttcgggaagggatcccaccatttggtgtattgtacgcaaccttatcctattttttacaaaagaggctgtttccagaacttgaacccgtgacctttc 19977850  T

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Target: chr2; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 21377109 - 21377210
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgaccttt 115  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| |||||| | ||| ||||| ||| ||||||    
T  21377109 cagggttcgggaaggggtcccaccatttggtgcattgtacccagccttaccctgttttttacacaagaggatgtttctatgacttgaactcgtaaccttt 21377208  T
Q  116 ca 117  Q
    ||    
T  21377209 ca 21377210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 32781332 - 32781425
Alignment:
Q  25 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||  ||| ||||| ||||||||||||    
T  32781332 gggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggttgtttccgagacttgaactcgtgacctttca 32781425  T

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Target: chr2; HSP #21
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 11514521 - 11514437
Alignment:
Q  31 gggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    ||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||  |||||||||||||||    
T  11514521 gggtcccaccatttggtgtattgtacgcagccttactttgttttttacacaagaggctgtttccaggagttgaacccgtgacctt 11514437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 23145736 - 23145835
Alignment:
Q  19 gggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||| |||||| ||||||||||| |||||||||||||||||||||||| ||| |||||||||||||| |||||| || ||| ||||||||||||||||||    
T  23145736 gggtccgggaaagggtcccaccaattggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttca 23145835  T

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Target: chr2; HSP #23
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 23557526 - 23557625
Alignment:
Q  19 gggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||| |||||| ||||||||||| |||||||||||||||||||||||| ||| |||||||||||||| |||||| || ||| ||||||||||||||||||    
T  23557526 gggtccgggaaagggtcccaccaattggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttca 23557625  T

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Target: chr2; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 117
Target Start/End: Original strand, 99311 - 99400
Alignment:
Q  27 gaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||| ||||||||||||||||||||||||||||| || |||||||  ||||||||||||||| ||||| ||||||||||||||||||    
T  99311 gaaggggttccaccatttggtgtattgtacgcagccttgccatgttttt-tacaagaggctgtttctaggacttgaacccgtgacctttca 99400  T

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Target: chr2; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 17896359 - 17896258
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccc--tgtttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||| || ||||||||||||||||||||| ||||||||||||||||||||  | ||||||||||||||| |||||| ||||| |||| ||||||||||    
T  17896359 cagggtccgagaaggggtcccaccatttggtatattgtacgcagccttaccctatttttttacacaagaggttgtttctaggacttgaatccgtgacctt 17896260  T
Q  115 tc 116  Q
    ||    
T  17896259 tc 17896258  T

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Target: chr2; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 25079753 - 25079852
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--tttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||| |||||||||||||||||||| ||||||||||||||| ||||||| ||  ||||||||||||||| |||||| | ||| |||||||||||||||    
T  25079753 cagggtccgggaaggggtcccaccattcggtgtattgtacgcatccttaccttgtttttttacacaagaggttgtttctaagacttgaacccgtgacctt 25079852  T

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Target: chr2; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 27573719 - 27573619
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    ||||||| |||||  ||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||| || |||| ||||||  |||||||||    
T  27573719 cagggtttgggaaatggttccaccatttggtgtattgtacgcagccttaccatgtttatacacaagaggctgttgcccggacttgaaccaatgacctttc 27573620  T
Q  117 a 117  Q
    |    
T  27573619 a 27573619  T

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Target: chr2; HSP #28
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 17380273 - 17380372
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| | ||||||||| ||| |||||||||||||| || || ||||||||||||| ||||||||||| |||||||| ||| |||||||||||||||||    
T  17380273 cagggtccaggaaggggttccatcatttggtgtattgcacacaaccttaccctgtttatacacaagaggttgtttccaagacttgaacccgtgacctttc 17380372  T

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Target: chr2; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 4516387 - 4516488
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgaccttt 115  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| || ||||| |||||||||||||||||||||| || || ||||   |||||||||    
T  4516387 cagggtccgggaaggggtcccaccaattggtgtattgtacgcagcgttgccctgttttttacacaagaggctgtttctagaacttgaatatgtgaccttt 4516486  T
Q  116 ca 117  Q
    ||    
T  4516487 ca 4516488  T

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Target: chr2; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 114
Target Start/End: Complemental strand, 5841127 - 5841029
Alignment:
Q  19 gggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||| ||||||||||||||||||||  || ||||||||||||| ||||||||| ||||| |||||| |||||||||| ||||| |||||||||||||||    
T  5841127 gggtccgggaaggggtcccaccattattgatgtattgtacgcatccttaccctattttttacacaaaaggctgtttctaggacttgaacccgtgacctt 5841029  T

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Target: chr2; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 30826121 - 30826058
Alignment:
Q  31 gggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttcca 94  Q
    |||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  30826121 gggttccaccatttggtgtattgtacgcaaccttaccctatttttacacaagaggctgtttcca 30826058  T

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Target: chr2; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 26 - 114
Target Start/End: Original strand, 39914350 - 39914440
Alignment:
Q  26 ggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--tttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||||||||||||||| |||||||||||| || ||||||||||  ||||||||||||||| ||||||||| || ||| |||||||||||    
T  39914350 ggaaggggtcccaccattcggtgtattgtacacatccttaccctgtttttttacacaagaggttgtttccagtacttgatcccgtgacctt 39914440  T

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Target: chr2; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 40762270 - 40762349
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccag 95  Q
    |||||| | |||| ||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||    
T  40762270 cagggtccaggaaagggtcccaccatttggtgtattgtacgtagccttacccagttttttacacaagaggctgtttccag 40762349  T

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Target: chr2; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 33795376 - 33795283
Alignment:
Q  25 gggaaggggtcccaccatttggtgtatt-gtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||||||||||  |||||||| ||||||||||||||||||||||| || ||||||| ||||||| |||| ||||||||||||||||||    
T  33795376 gggaaggggtcccaccata-ggtgtatttgtacgcagccttaccctgttttttacccaagaggttgtttccgggacttgaacccgtgacctttca 33795283  T

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Target: chr2; HSP #35
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 46 - 117
Target Start/End: Complemental strand, 7214604 - 7214532
Alignment:
Q  46 gtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||| ||| ||||||| ||||||||||    
T  7214604 gtgtattgtacgcagccttaccctgtattttacacaagagactgtttccaagacttgaacccatgacctttca 7214532  T

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Target: chr2; HSP #36
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 19615092 - 19614990
Alignment:
Q  17 cagggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacct 113  Q
    |||||||||||||||||||| || |||  |||| |||||||||||| |||||||||||||| | |||||||| |||||| ||||| ||||||||||||||    
T  19615092 cagggttcgggaaggggtcc-actattattggtatattgtacgcagtcttaccctgttttttatacaagaggatgtttcaaggacttgaacccgtgacct 19614994  T
Q  114 ttca 117  Q
    ||||    
T  19614993 ttca 19614990  T

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Target: chr2; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 2003592 - 2003674
Alignment:
Q  37 caccatttggtgtattgtacgcagccttaccctg--tttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||| ||||||||||||| ||||||||||  ||||||| |||| ||||||||||||||| || |||||||||||||||    
T  2003592 caccatttgttgtattgtacgcatccttaccctgtttttttacgcaaggggctgtttccaggacttgtacccgtgacctttca 2003674  T

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Target: chr2; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 44 - 114
Target Start/End: Complemental strand, 17705567 - 17705496
Alignment:
Q  44 tggtgtattgtacgcagccttaccctgtt-tttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    ||||||||||||| ||||||||| ||||| |||||||||||||| ||||||||||| |||||||||||||||    
T  17705567 tggtgtattgtacacagccttactctgttgtttacacaagaggcggtttccaggacttgaacccgtgacctt 17705496  T

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Target: chr2; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 24860024 - 24860120
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||| || |||||||| | ||||||||||||||||||||||||| |||| ||||||||||| ||||| |||||||||| | | ||||||| |||||    
T  24860024 cagggtccgagaaggggttctaccatttggtgtattgtacgcagcc-taccatgtttttacaccagaggttgtttccagggcttaaacccgtaacctt 24860120  T

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Target: chr2; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 30864453 - 30864530
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttcca 94  Q
    ||||||| ||||| || ||  |||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||    
T  30864453 cagggtttgggaaaggatcttaccatttggtatattgtacgcacccttaccctatttttacacaagaggctgtttcca 30864530  T

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Target: chr2; HSP #41
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 26684656 - 26684759
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttacc--ctgtttttacacaagagg-ctgtttccaggacatgaacccgtgacct 113  Q
    |||||||||||||| ||||||||||||| || |||||||||||||||||||   | ||||||||||||||| |||||| |||||| | ||||  ||||||    
T  26684656 cagggttcgggaagaggtcccaccatttagtatattgtacgcagccttaccatatttttttacacaagaggtctgttttcaggacttaaacctttgacct 26684755  T
Q  114 ttca 117  Q
    ||||    
T  26684756 ttca 26684759  T

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Target: chr2; HSP #42
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 40416921 - 40417005
Alignment:
Q  31 gggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||||| || |||||||||||||| ||||||| ||||| |||||| |||||||| |||||||| ||| |||||||||||||||    
T  40416921 gggtcccatcaattggtgtattgtacacagcctttccctgttttttatacaagaggttgtttccatgacttgaacccgtgacctt 40417005  T

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Target: chr2; HSP #43
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 15296442 - 15296533
Alignment:
Q  17 cagggttcgggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacatgaaccc 106  Q
    |||||| || |||||| |||||| |||| ||| ||||||||||||||||||||||| |||||||||| ||||||||||| |||| |||||||    
T  15296442 cagggtccgagaagggatcccactattttggtatattgtacgcagccttaccctgtattttacacaacaggctgtttccgggacttgaaccc 15296533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 25632605 - 25632550
Alignment:
Q  20 ggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt 75  Q
    ||||||||||||  |||||||||||||||||||||||||||||||| |||||||||    
T  25632605 ggttcgggaaggaatcccaccatttggtgtattgtacgcagccttatcctgttttt 25632550  T

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Target: chr2; HSP #45
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 29419946 - 29420026
Alignment:
Q  42 tttggtgtattgtacgcagccttac----cctgtttt-tacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||||||||||||||    |||||||| ||||||||||| |||||||||||| ||||| ||||||||||||    
T  29419946 tttggtgtattgtacgcagccttacttaccctgttttttacacaagaggttgtttccaggacttgaactcgtgacctttca 29420026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 44643614 - 44643520
Alignment:
Q  25 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--tttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||||||||||||  ||||||||||||||||| |||  |||||||  |||||||| |||| || || ||||| ||||||||||||    
T  44643614 gggaaggggtcccaccatttggtacattgtacgcagccttactctgtttttttacggaagaggctctttctagaacttgaacacgtgacctttca 44643520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 12315697 - 12315787
Alignment:
Q  26 ggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| ||| ||| |||||||||||||||| ||| ||||||||||||||  | |||| |||||||||| ||| ||||| |||||||||||    
T  12315697 ggaaggagtctcactatttggtgtattgtacacagtcttaccctgttttttaataagaagctgtttccatgacttgaactcgtgacctttc 12315787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 24890510 - 24890452
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt 75  Q
    |||||| |||||||||||||||||| ||||||||||||| ||||||||||| |||||||    
T  24890510 cagggtccgggaaggggtcccaccaattggtgtattgtatgcagccttaccttgttttt 24890452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 114
Target Start/End: Original strand, 13245138 - 13245220
Alignment:
Q  24 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||        |||||||||| |||||||||||| ||||| |||||||||    
T  13245138 cgggaaggggtcccaccatttagtgtaatgtacgcagccttacc--------acacaagaggttgtttccaggacttgaactcgtgacctt 13245220  T

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Target: chr2; HSP #50
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 44521417 - 44521510
Alignment:
Q  25 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||| |||| |||||||||||||| || ||||||||||| || ||||||||||||||  |||||||| ||  ||||| ||||||||||||    
T  44521417 gggaagggctcccgccatttggtgtattatatgcagccttaccttgttttttacacaagagattgtttccaagatttgaacgcgtgacctttca 44521510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 44604907 - 44604855
Alignment:
Q  62 cttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||||||||||||||||||||| |||||||||||| |||||| ||||||||    
T  44604907 cttaccctgtttttacacaagaggttgtttccaggacttgaacctgtgacctt 44604855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 44449419 - 44449478
Alignment:
Q  17 cagggttcgggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgttttt 75  Q
    |||||| |||||||||||||||| |||| ||||||||||||||||||||| |||||||||    
T  44449419 cagggtccgggaaggggtcccactattttggtgtattgtacgcagccttatcctgttttt 44449478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 31821379 - 31821478
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-gtttttacacaagaggctgtttccaggacatgaacccgtgaccttt 115  Q
    |||| ||||| ||||||||||| ||||||||||||||||| || |||||||||  ||||||||||   ||||||||| | ||| ||||| ||||||||||    
T  31821379 caggtttcggaaaggggtcccatcatttggtgtattgtacacaaccttaccctattttttacaca--cggctgtttctacgacttgaactcgtgaccttt 31821476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 45235864 - 45235955
Alignment:
Q  28 aaggggtcccaccatttggtgtattgtacgcagccttaccctgt--ttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||||||||| |||||||  ||| ||||||||||| |  ||||||| ||||| ||||||| ||||| ||||| ||||| ||||||    
T  45235864 aaggggtcccaccattttgtgtattacacgtagccttaccctattattttacagaagagactgtttctaggacttgaactcgtgatctttca 45235955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 14544165 - 14544061
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtg--tattgtacgcagccttaccctgttttt--acacaagaggctgtttccaggacatgaacccgtgacc 112  Q
    |||||| | ||||||||||| |||||||  ||  ||||| |||||| ||||||||||||||  |||||||||||||||||||| || || ||| || |||    
T  14544165 cagggtcccggaaggggtccgaccattttttggttattgcacgcagtcttaccctgtttttctacacaagaggctgtttccagtacctggacctgtaacc 14544066  T
Q  113 tttca 117  Q
    |||||    
T  14544065 tttca 14544061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 39499277 - 39499331
Alignment:
Q  28 aaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaag 82  Q
    ||||| |||||||||||| ||||||||||||||| ||||||| |||||| |||||    
T  39499277 aagggatcccaccatttgatgtattgtacgcagctttaccctatttttatacaag 39499331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 17471641 - 17471546
Alignment:
Q  25 gggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgttttt--acacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||| || ||||| ||| |||||||||||| |||| |||||||||  |||||||||||||||||   ||| |||||| ||||| |||||    
T  17471641 gggaaggggtctcatcattttggtatattgtacgcagtcttatcctgtttttttacacaagaggctgtttctgagacttgaacctgtgacatttca 17471546  T

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Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 31158483 - 31158578
Alignment:
Q  25 gggaaggggtcccacca--tttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||||||  |||||| ||||||| |||  ||||||||| ||||||| |||||||||||||  | ||| | ||||| ||||||||||    
T  31158483 gggaaggggtcccaccatttttggtttattgtatgcaatcttaccctgttttttacgcaagaggctgttttgaagactttaacccttgacctttca 31158578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 3e-41; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 13160800 - 13160703
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  13160800 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttctaggacttgaacccgtgacctt 13160703  T

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Target: chr8; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 12670286 - 12670385
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  12670286 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 12670384  T

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Target: chr8; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 36720895 - 36720797
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  36720895 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctt 36720797  T

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Target: chr8; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 24 - 114
Target Start/End: Complemental strand, 45071356 - 45071266
Alignment:
Q  24 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  45071356 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccagaacttgaacccgtgacctt 45071266  T

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Target: chr8; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 28817662 - 28817760
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  28817662 cagggtccgggaaggggtcccaccattgggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctt 28817760  T

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Target: chr8; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 30454133 - 30454232
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||    
T  30454133 cagggtccgggaaggggtcccaccatttggtgtatcgtacgcagccttaccttg-ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 30454231  T

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Target: chr8; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 17823675 - 17823575
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgaccttt 115  Q
    |||||||||||||||||| ||||||||||||||||| ||||||| |||| |||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  17823675 cagggttcgggaaggggttccaccatttggtgtattttacgcagtcttatcctggtttttacacaagaggctgtttccaggacttgaacccgtgaccttt 17823576  T
Q  116 c 116  Q
    |    
T  17823575 c 17823575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 44530248 - 44530150
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||| |||||||||||||||    
T  44530248 cagggtccaggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaagacttgaacccgtgacctt 44530150  T

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Target: chr8; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 5135325 - 5135418
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-gtttttacacaagaggctgtttccaggacatgaacccgtg 109  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||| ||||||||||    
T  5135325 cagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctcttttttacacaagaggctgtttccaggacttgaacccgtg 5135418  T

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Target: chr8; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 18164796 - 18164896
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| ||||||  |||| || | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18164796 cagggtccgggaaatggtcacatcctttggtgtattgtacgcaaccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacctttc 18164895  T
Q  117 a 117  Q
    |    
T  18164896 a 18164896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 39461030 - 39461133
Alignment:
Q  17 cagggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggacatgaacccgtgacct 113  Q
    |||||| |||||||||||| |||||||  ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||    
T  39461030 cagggtccgggaaggggtctcaccattattggtgtattgtacgcagccttactctgttttttacacaagaggctgtttccaggacttgaacccgtgacct 39461129  T
Q  114 ttca 117  Q
    ||||    
T  39461130 ttca 39461133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 114
Target Start/End: Complemental strand, 26954226 - 26954133
Alignment:
Q  25 gggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgttttt--acacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||    
T  26954226 gggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttttacacaagaggctgtttccaggacttgaacccgtgacctt 26954133  T

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Target: chr8; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 29877193 - 29877110
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggaca 99  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  29877193 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaaaaggctgtttccaggaca 29877110  T

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Target: chr8; HSP #14
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 25 - 116
Target Start/End: Complemental strand, 2626613 - 2626518
Alignment:
Q  25 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt----ttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||    ||||||||||||||||||||||||||| |||||||||||||||||    
T  2626613 gggaaggggtcccatcatttggtgtattgtacgcagtcttaccctgtttttttttacacaagaggctgtttccaggacttgaacccgtgacctttc 2626518  T

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Target: chr8; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 25 - 114
Target Start/End: Original strand, 29521729 - 29521819
Alignment:
Q  25 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||    
T  29521729 gggatgggttcccaccatttggtgtattgtacgcagccttaccctgttttttaaacaagaggctgtttccaggacttgaacccgtgacctt 29521819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 35261778 - 35261680
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||| | |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||| | |||||||||||||||    
T  35261778 cagggtccaggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgttttttacacaagagactgtttccagggcttgaacccgtgacctt 35261680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 20869536 - 20869633
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| |||||||||||| ||||  |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  20869536 cagggtccgggaaggggtctcacc--ttggtgtattgtacacagccttaccctgtttt-acacaagaggctgtttccaggacttgaacccgtgacctttc 20869632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 17 - 111
Target Start/End: Original strand, 24365095 - 24365191
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--tttttacacaagaggctgtttccaggacatgaacccgtgac 111  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||| ||| | ||||||||||||    
T  24365095 cagggtccgggaaggggtcccaccatttggtgtattgttcgcagccttaccctgattttttacacaagaggctgtttctagggcttgaacccgtgac 24365191  T

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Target: chr8; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 20284105 - 20284210
Alignment:
Q  17 cagggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgttttt---acacaagaggctgtttccaggacatgaacccgtgac 111  Q
    |||||| ||||||||||||||||||||  |||||||||||||||||||||||||| |||||   | ||||||||||||||||||||| ||||||||||||    
T  20284105 cagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttacccttttttttttatacaagaggctgtttccaggacttgaacccgtgac 20284204  T
Q  112 ctttca 117  Q
    ||||||    
T  20284205 ctttca 20284210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 31457271 - 31457171
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    ||||||| |||||||||||| |||||||| ||||||||||||||||||  ||| ||||||||||||||| ||||| |||||| |||||||||||||||||    
T  31457271 cagggtttgggaaggggtcctaccatttgatgtattgtacgcagccttttcctatttttacacaagaggttgtttacaggacttgaacccgtgacctttc 31457172  T
Q  117 a 117  Q
    |    
T  31457171 a 31457171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 6760913 - 6760823
Alignment:
Q  27 gaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||||||||||||||  |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  6760913 gaaggggtcccaccattattggtgtattgtacgaagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctt 6760823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 114
Target Start/End: Original strand, 7136565 - 7136663
Alignment:
Q  19 gggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||| ||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||| |||||||    
T  7136565 gggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctggtttttacacaagaggttgtttccaggacttgaacccatgacctt 7136663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 8897800 - 8897898
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-gtttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||| || |||||||||||| | |||||||||||||    
T  8897800 cagggtccgggaaggggtcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgacctt 8897898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 21070733 - 21070839
Alignment:
Q  17 cagggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgttttt----acacaagaggctgtttccaggacatgaacccgtga 110  Q
    |||||| ||||||||||||||||||||  |||||||||||||||||||||||||| |||||    | ||||||||||||||||||||| |||||||||||    
T  21070733 cagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctttttttttttatacaagaggctgtttccaggacttgaacccgtga 21070832  T
Q  111 cctttca 117  Q
    |||||||    
T  21070833 cctttca 21070839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 23000262 - 23000353
Alignment:
Q  24 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||||||||||||||||||||| | | ||||||| |||||||||||||||||||||||||||||| |  |||||||||||||||    
T  23000262 cgggaaggggtcccaccatttggtgtattgtatggaaccttaccgtgtttttacacaagaggctgtttccaggactt--acccgtgacctttca 23000353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 5689727 - 5689640
Alignment:
Q  20 ggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaaccc 106  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| || ||| |||||||    
T  5689727 ggttcgggaaggggttccaccatttggtgtattgtacgcagccttaccctgctttttacacaagaggctatttacaagacttgaaccc 5689640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 12625989 - 12625891
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt--ttttacacaagaggctgtttccaggacatgaacccgtgacct 113  Q
    |||||| ||||| |||||||||||||||||||||||||| |||| ||||||||||  |||||||||||||| |||||||||||| ||| ||||||||||    
T  12625989 cagggtccgggagggggtcccaccatttggtgtattgtatgcagtcttaccctgtttttttacacaagaggttgtttccaggacttgagcccgtgacct 12625891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 42083734 - 42083836
Alignment:
Q  17 cagggttcgggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||||||||||||||||||||||||| ||| || ||||||||||||| |||  |||| ||||||| |||||||||||||||| |||||||||||||||    
T  42083734 cagggttcgggaaggggtcccaccattttggtatactgtacgcagccttgccccattttttacacaaaaggctgtttccaggacttgaacccgtgacctt 42083833  T
Q  115 tca 117  Q
    |||    
T  42083834 tca 42083836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 28 - 116
Target Start/End: Complemental strand, 389733 - 389642
Alignment:
Q  28 aaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt---acacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    ||||| ||||| |||||||||||||||||||| |||||||||||||||   |||||||||| |||||||||||| |||||||||||||||||    
T  389733 aagggatcccatcatttggtgtattgtacgcaaccttaccctgtttttttgacacaagagggtgtttccaggacttgaacccgtgacctttc 389642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 35106014 - 35105921
Alignment:
Q  26 ggaaggggtcccaccatt-tggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||| |||||||||||| ||||||||||||||||||||||| || | |||||||||||||| |||||||||||| ||||||||||||||||||    
T  35106014 ggaagaggtcccaccattctggtgtattgtacgcagccttacactctcttttacacaagaggttgtttccaggacttgaacccgtgacctttca 35105921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 25 - 111
Target Start/End: Original strand, 8483982 - 8484069
Alignment:
Q  25 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgac 111  Q
    |||| |||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  8483982 gggatggggtcccaccaattggtgtattgtacgcagccttgccctgttttttacacaagaggttgtttccaggacttgaacccatgac 8484069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 114
Target Start/End: Complemental strand, 25250621 - 25250523
Alignment:
Q  19 gggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||||||||||||||||||||||  ||||||||||||||||||| |||||| ||||| |||||| |||||||||||||||| |||||  ||||||||    
T  25250621 gggttcgggaaggggtcccaccattattggtgtattgtacgcagccataccctattttttacacaataggctgtttccaggacttgaacatgtgacctt 25250523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 22598249 - 22598155
Alignment:
Q  24 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||| ||||| ||||| ||||||||||||||  ||||||||||||||||| |||||||||| |||||||||||  ||||||||||||||||||    
T  22598249 cgggaaagggtctcaccaattggtgtattgtacatagccttaccctgttttttacacaagaggttgtttccaggatttgaacccgtgacctttca 22598155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 19729439 - 19729363
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttcca 94  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||| |||||||||    
T  19729439 cagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctg-ttttacataagagactgtttcca 19729363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 44781567 - 44781643
Alignment:
Q  42 tttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||| ||||||||||| ||||||    
T  44781567 tttggtgtattgtacacagccttaccctgtcttttacacaagaggttgtttccaggacttgaacccgtgaactttca 44781643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 17250911 - 17251001
Alignment:
Q  17 cagggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggacatgaac 104  Q
    ||||||||||||| |||||||||||||  ||||||||||||||| |||||| |||||||| |||||||||||||| ||||||||| |||||    
T  17250911 cagggttcgggaaagggtcccaccattattggtgtattgtacgctgccttaacctgttttttacacaagaggctgcttccaggacttgaac 17251001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 20870015 - 20869941
Alignment:
Q  26 ggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccagga 97  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  20870015 ggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagagactgtttccagga 20869941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 60 - 114
Target Start/End: Complemental strand, 28407471 - 28407417
Alignment:
Q  60 gccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  28407471 gccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacctt 28407417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 14018004 - 14018106
Alignment:
Q  17 cagggttcgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||| | ||||| |||||||||| ||| ||||||||||||||| || |||||||||| |||||||||| ||||||||| ||| ||||||| |||||||    
T  14018004 cagggtccaggaagtggtcccaccaatttagtgtattgtacgcagtctcaccctgttttttacacaagagactgtttccaagacttgaacccatgacctt 14018103  T
Q  115 tca 117  Q
    |||    
T  14018104 tca 14018106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 23286375 - 23286432
Alignment:
Q  31 gggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgt 89  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  23286375 gggtcccaccatttggtgtattgtacgcagctttaccctg-ttttacacaagaggctgt 23286432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 43942417 - 43942348
Alignment:
Q  25 gggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgttttt-acacaagaggctgttt 91  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  43942417 gggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttgacataagaggctgttt 43942348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 44742564 - 44742653
Alignment:
Q  27 gaaggggtcccaccattt-ggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||  ||||||||| || ||||| | |||||||    
T  44742564 gaaggggtcccaccattttggtgtattgtacgcagccttaccctgttttttacacaggagattgtttccagaacttgaactcatgacctt 44742653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 10857919 - 10857844
Alignment:
Q  26 ggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt--ttttacacaagaggctgtttccaggaca 99  Q
    ||||| |||||||||| |||||||||||| ||||||||||||||||  ||||||||||||||| |||||| |||||    
T  10857919 ggaagtggtcccaccaattggtgtattgtgcgcagccttaccctgtttttttacacaagaggcggtttcctggaca 10857844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 11748400 - 11748297
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtat--tgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgacct 113  Q
    |||| ||||||||||||||| |||||||  |||||  ||||||| | ||||||||| |||||||| ||||||||||||||| ||| |||||||||||| |    
T  11748400 caggattcgggaaggggtcctaccattttttgtatattgtacgctgtcttaccctgctttttacaaaagaggctgtttccaagacttgaacccgtgacat 11748301  T
Q  114 ttca 117  Q
    ||||    
T  11748300 ttca 11748297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 11000985 - 11001087
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--tttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||| | ||  ||||||||||  ||| ||||| ||| |  |||||||| ||||||    
T  11000985 cagggttcgggtaggggtcccaccatttggtgtattgtacacagccttatcttgtttttttacacagtaggttgttttcagaatttgaacccgcgacctt 11001084  T
Q  115 tca 117  Q
    |||    
T  11001085 tca 11001087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 16225118 - 16225045
Alignment:
Q  19 gggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgt 89  Q
    |||| ||||||||| ||||||||||  ||||||||||||||||| |||||||||| ||||||| ||||||||||    
T  16225118 gggtccgggaagggatcccaccattattggtgtattgtacgcagtcttaccctgttttttacataagaggctgt 16225045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 26457816 - 26457776
Alignment:
Q  29 aggggtcccaccatttggtgtattgtacgcagccttaccct 69  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  26457816 aggggtcccaccaattggtgtattgtacgcagccttaccct 26457776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 36918222 - 36918122
Alignment:
Q  18 agggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| |||||||  ||| || |||||||||||||||| |||||||||||||| ||||||| ||||   ||||||||| || |||||  ||||||||||    
T  36918222 agggtttgggaaggaatcctactatttggtgtattgtacacagccttaccctgttttttacataagaaattgtttccagaacttgaacatgtgacctttc 36918123  T
Q  117 a 117  Q
    |    
T  36918122 a 36918122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 117
Target Start/End: Original strand, 30962847 - 30962910
Alignment:
Q  55 acgcagccttaccctgtttt-tacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||| ||||| |||| |||||||||||||||||||||||| ||||  ||||||||||||    
T  30962847 acgcagcctaaccctattttttacacaagaggctgtttccaggacttgaagtcgtgacctttca 30962910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 55
Target Start/End: Complemental strand, 26102616 - 26102578
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgta 55  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  26102616 cagggtccgggaaggggtcccaccatttggtgtattgta 26102578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 24245548 - 24245449
Alignment:
Q  17 cagggttcgggaaggggtcccaccattt---ggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacct 113  Q
    |||||| | |||||||||||||| ||||   |||| |||||||| || |||||||||||   ||| ||||| | ||||||||||| ||||||||||||||    
T  24245548 cagggtccaggaaggggtcccacaattttttggtgcattgtacgtagtcttaccctgtt---acataagagac-gtttccaggacttgaacccgtgacct 24245453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 30231367 - 30231425
Alignment:
Q  18 agggttcgggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgttttt 75  Q
    |||||||||| | |||||||||||||| ||| ||||||||||||||||| |||| ||||    
T  30231367 agggttcgggtaagggtcccaccattttggtatattgtacgcagccttatcctgatttt 30231425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 1e-40; HSPs: 69)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 21172045 - 21172144
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  21172045 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 21172143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 10693109 - 10693208
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||    
T  10693109 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-cttttacacaagaggctgtttccaggacttgaacccgtgacctttc 10693207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 42391136 - 42391235
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||    
T  42391136 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagaagctgtttccaggacttgaacccgtgacctttc 42391234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 116
Target Start/End: Original strand, 2541062 - 2541155
Alignment:
Q  24 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  2541062 cgggaaggggtcccaccatttggtgtatagtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttc 2541155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 32758358 - 32758259
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  32758358 cagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctg-ttttacacaagaggctgtttccaggacttgaacctgtgacctttc 32758260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 33871954 - 33872046
Alignment:
Q  25 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||| |||||||||    
T  33871954 gggaaggggtcccaccatttggtgtattgtacgcagccttatcctgtttttacacaagaggttgtttccaggacttgaacccgcgacctttca 33872046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 18512489 - 18512588
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| | |||||||||||| |||||||||||||||||    
T  18512489 cagggtccgggaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgtttccaggacttgaacccgtgacctttc 18512588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 19265906 - 19265813
Alignment:
Q  24 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||| ||| ||||||||||||||||||    
T  19265906 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctctttttacacaagcggctgtatccaagacttgaacccgtgacctttca 19265813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 24 - 116
Target Start/End: Complemental strand, 27629726 - 27629633
Alignment:
Q  24 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  27629726 cgggaaggggtcccaccatttggtgtattttacgcaaccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttc 27629633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 19 - 114
Target Start/End: Complemental strand, 47716558 - 47716460
Alignment:
Q  19 gggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  47716558 gggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctt 47716460  T

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Target: chr7; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 7879737 - 7879639
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||  |||||||||||| |||||||||||||||    
T  7879737 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccttgttttttacacaagagattgtttccaggacttgaacccgtgacctt 7879639  T

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Target: chr7; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 11617624 - 11617725
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgaccttt 115  Q
    |||||| | ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||| |||||| |||||||||    
T  11617624 cagggtccaggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggttgtttccaggacttgaacctgtgaccttt 11617723  T
Q  116 ca 117  Q
    ||    
T  11617724 ca 11617725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 48735158 - 48735258
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttcc-aggacatgaacccgtgaccttt 115  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||| ||||| ||||||||||||||||    
T  48735158 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccgtg-ttttacacaagaggttgtttccaaggacttgaacccgtgaccttt 48735256  T
Q  116 ca 117  Q
    ||    
T  48735257 ca 48735258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 34626244 - 34626344
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| | ||| ||||||    
T  34626244 cagggtccgggaagggatcccaccatttggtgtattgaacgcagccttaccctgtttttacacaggaggctgtttccaggacttgaatctgtggcctttc 34626343  T
Q  117 a 117  Q
    |    
T  34626344 a 34626344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 38604625 - 38604546
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccagg 96  Q
    |||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38604625 cagggtccggaaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccagg 38604546  T

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Target: chr7; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 114
Target Start/End: Complemental strand, 42805623 - 42805525
Alignment:
Q  19 gggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||| ||||||||||||||||||||  ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  42805623 gggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctt 42805525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 114
Target Start/End: Complemental strand, 46354293 - 46354195
Alignment:
Q  19 gggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||    
T  46354293 gggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgacctt 46354195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 19426939 - 19427025
Alignment:
Q  31 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||| |||||||||||||||||    
T  19426939 gggtcccaccatttggtgtattgtacgcagtcttaccctattttttacacaagaggctgtttccaggacttgaacccgtgacctttc 19427025  T

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Target: chr7; HSP #19
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 26 - 115
Target Start/End: Original strand, 23419719 - 23419809
Alignment:
Q  26 ggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgaccttt 115  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| || |||||| |||||||||    
T  23419719 ggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttccagaacttgaacctgtgaccttt 23419809  T

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Target: chr7; HSP #20
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 42798768 - 42798670
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||| ||| |||||||||||||||    
T  42798768 cagggtccgggaaagggtcccaccatttggtgtattgtacgcagccttaccttgttttttacacaagagactgtttccaagacttgaacccgtgacctt 42798670  T

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Target: chr7; HSP #21
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 40463975 - 40463878
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||| || |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||| | ||| |||||||||||||||    
T  40463975 cagggtccgagaaggggtcccaccatttggtgtattatacgcagccttacccagtttttacacaagagactgtttctatgacttgaacccgtgacctt 40463878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 14099043 - 14099143
Alignment:
Q  18 agggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||| ||||| |||||||||| | ||||| |||||||||    
T  14099043 agggttcgggaaggggtcccaccatttggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggacttcaacccatgacctttc 14099142  T
Q  117 a 117  Q
    |    
T  14099143 a 14099143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 14409060 - 14409160
Alignment:
Q  18 agggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||| ||||| |||||||||| | ||||| |||||||||    
T  14409060 agggttcgggaaggggtcccaccatttggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggacttcaacccatgacctttc 14409159  T
Q  117 a 117  Q
    |    
T  14409160 a 14409160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 32233171 - 32233271
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    ||||||| |||||||  ||||||||||||||||| | ||||| |||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||    
T  32233171 cagggtttgggaaggaatcccaccatttggtgtaatatacgctgccttaccctgtttttacacaagaggttgtttccaggacttgaacccatgacctttc 32233270  T
Q  117 a 117  Q
    |    
T  32233271 a 32233271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 18747586 - 18747484
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--tttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||||| |||||||||||||||| |||||||||| |||||||||||||||||  ||||||||||| |||||||||||| ||| ||| |||||||||||    
T  18747586 cagggttcaggaaggggtcccaccaattggtgtattatacgcagccttaccctgcttttttacacaaaaggctgtttccaagacttgatcccgtgacctt 18747487  T
Q  115 tca 117  Q
    |||    
T  18747486 tca 18747484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 48123531 - 48123621
Alignment:
Q  28 aaggggtcccaccatttggtgtattgtacgcagccttaccctgtt-tttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||||||||||||||||| ||||  |||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||    
T  48123531 aaggggtcccaccatttggtgtattgtatgcagttttaccctgttatttacacaagaggctgtttccaggacttgaacccatgacctttca 48123621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 28362189 - 28362282
Alignment:
Q  25 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||| ||||| ||||| |||||| |||||||||||    
T  28362189 gggaaggggtcccaccatttggtgtattgtacgcagccttaccaagttttttacacaagaggcagtttctaggacttgaacctgtgacctttca 28362282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 31591152 - 31591244
Alignment:
Q  24 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||||||||||  |||||||||||||||||||| ||| |||||||||||||| |||||||||||| ||||| ||||||||||||    
T  31591152 cgggaaggggtcccaccatttattgtattgtacgcagccttactctg-ttttacacaagaggttgtttccaggacttgaactcgtgacctttca 31591244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 26 - 115
Target Start/End: Complemental strand, 42476961 - 42476873
Alignment:
Q  26 ggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgaccttt 115  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| || |||| |||||||||||    
T  42476961 ggaaggggtcccaccatttggtgtattgtacgcagccttaccttg-ttttacacaagagactgtttccagaacttgaatccgtgaccttt 42476873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 43557566 - 43557470
Alignment:
Q  24 cgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||| ||||||||||||||  ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||| ||||||||||    
T  43557566 cgggagggggtcccaccattattggtgtattgtacgcagccttactctgttttttacacaagaggctgtttccaggacttgaacccatgacctttca 43557470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 47077892 - 47077990
Alignment:
Q  18 agggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||| |||||||||||||||||||| |||||||||||||| | |||| || |||| ||||||||| ||||||||||||| ||||||||||||||||||    
T  47077892 agggtttgggaaggggtcccaccattttgtgtattgtacgcaactttactctatttt-acacaagagactgtttccaggacttgaacccgtgacctttca 47077990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 2662985 - 2663058
Alignment:
Q  31 gggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacc 105  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||    
T  2662985 gggtcccaccatttggtgtattgtacgcagccttaccct-attttacacaagaggctgtttccaggacttgaacc 2663058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 29907519 - 29907417
Alignment:
Q  17 cagggttcgggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||| ||||| ||||||||||||||| ||||||||| |||||||||||| || ||||| ||||||||||||||||| ||||| |||||||||||||||    
T  29907519 cagggtccgggatggggtcccaccattttggtgtattgaacgcagccttacactattttttacacaagaggctgtttctaggacttgaacccgtgacctt 29907420  T
Q  115 tca 117  Q
    |||    
T  29907419 tca 29907417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 7645047 - 7644954
Alignment:
Q  26 ggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||| |||| ||||||||||||||   |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  7645047 ggaaggggtcccacaattttggtgtattgtacgctatcttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttca 7644954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 11741885 - 11741793
Alignment:
Q  24 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||  |||||||| ||| ||||||| |||||| ||||||| ||||||||||    
T  11741885 cgggaagggatcccaccatttggtgtattgtacgcagccttaccct-attttacactagaagctgttttcaggacttgaacccatgacctttca 11741793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 28078168 - 28078265
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||| |||||||||||||||||||||||||||||||| | ||| |||||||||||||||  ||| ||| ||||||| ||||| |||||||||||||||    
T  28078168 caggattcgggaaggggtcccaccatttggtgtattgcatgcaaccttaccctgtttttttacacgagactgtttctaggacttgaacccgtgacctt 28078265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 13805200 - 13805100
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| | ||||| ||||||||||||||||||||||||| |||||||||||   |||||||| ||||||| |||||||||| ||||||||| |||||||    
T  13805200 cagggtccaggaagtggtcccaccatttggtgtattgtacacagccttacccctgttttacaccagaggctatttccaggacttgaacccgttacctttc 13805101  T
Q  117 a 117  Q
    |    
T  13805100 a 13805100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 1408556 - 1408469
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaa 103  Q
    |||||| |||||||||||||||||||||| |||||||||| |||||||||| || ||||||||||||||||| |||||||||| ||||    
T  1408556 cagggtccgggaaggggtcccaccatttgctgtattgtacacagccttaccttgttttttacacaagaggctatttccaggacttgaa 1408469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 16341371 - 16341276
Alignment:
Q  24 cgggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||| || |||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||| || || ||||||||||||||||||    
T  16341371 cgggaagagggcccaccattttggtgtattgtacgtagccttaccctgttttttacacaagaggctgtttctagaacttgaacccgtgacctttca 16341276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 35787312 - 35787386
Alignment:
Q  24 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggaca 99  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||    
T  35787312 cgggaaggggtcccgccatttggtgtattgtacgcaaccttaccatgtttttacacaagaggctg-ttccaggaca 35787386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 17 - 111
Target Start/End: Original strand, 15108433 - 15108527
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgac 111  Q
    ||||||| |||||||| |||||| ||||| |||||||||| |||||||||| |||||||||||||||  ||||||||||||| ||||| ||||||    
T  15108433 cagggtttgggaagggatcccactatttgatgtattgtacacagccttaccttgtttttacacaagaaactgtttccaggacttgaactcgtgac 15108527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 21 - 114
Target Start/End: Original strand, 38262236 - 38262330
Alignment:
Q  21 gttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||||||||||||||| |||||||||||||||| ||| | ||||| | |||| |||||||||| ||||||||||||| |||||||||||||||    
T  38262236 gttcgggaaggggtcccatcatttggtgtattgtatgcaacattaccatattttttacacaagagactgtttccaggacttgaacccgtgacctt 38262330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 19266549 - 19266448
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacatgaacccgtgaccttt 115  Q
    |||||| ||||||||| |||||| ||||||||||||||||||||||||||||||| |||||| |||| |||| ||| |||||| |||||||  |||||||    
T  19266549 cagggtccgggaagggatcccacaatttggtgtattgtacgcagccttaccctgttttttacgcaagtggctattttcaggacttgaacccacgaccttt 19266450  T
Q  116 ca 117  Q
    ||    
T  19266449 ca 19266448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 35334852 - 35334948
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||| |||||||||||||||||||| |||||||||||| ||| ||||||||||||||  ||| ||| ||||||||||||| ||||| |||||||||    
T  35334852 cagggtccgggaaggggtcccaccattcggtgtattgtacacagtcttaccctgttttt-tacacgagactgtttccaggacttgaactcgtgacctt 35334948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 23231656 - 23231574
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggac 98  Q
    |||||||||||||||||||||| |||| |||||||| |||||||||||||| | | |||||||||||||||| ||||||||||    
T  23231656 cagggttcgggaaggggtcccatcattcggtgtattatacgcagccttaccttatattttacacaagaggctctttccaggac 23231574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 6736969 - 6736888
Alignment:
Q  36 ccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||||||||| |||| |||||| |||||||| |||||||| |||||  ||||| ||||||||||||||||||    
T  6736969 ccaccatttggtgtattgtatgcagtcttaccttgtttttatacaagaggttgttttgaggacttgaacccgtgacctttca 6736888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 25 - 111
Target Start/End: Original strand, 8148989 - 8149077
Alignment:
Q  25 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt--acacaagaggctgtttccaggacatgaacccgtgac 111  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |||||  ||||||||||  |||| |||||| ||||| ||||||    
T  8148989 gggaaggggtcccaccatttggtgtattgtacgcaaccttaccctattttttaacacaagaggtagttttcaggacttgaactcgtgac 8149077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 12473378 - 12473302
Alignment:
Q  42 tttggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||||||| ||||||||||||||| |||||||||| ||||| |||||| ||||||| ||||||||||    
T  12473378 tttggtgtattgtacgcatccttaccctgtttttgacacaagaggttgtttgcaggacttgaacccatgacctttca 12473302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 18327091 - 18327035
Alignment:
Q  58 cagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  18327091 cagccttaccctgtttttacacaagaggctgtttccgggacttgaacccgtgacctt 18327035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 17 - 111
Target Start/End: Complemental strand, 21566535 - 21566439
Alignment:
Q  17 cagggttcgggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgac 111  Q
    |||||||||||||||||||| ||||||| |||||||||||||||| ||| | |||||||| ||||||||||| ||||||| ||| |||||| |||||    
T  21566535 cagggttcgggaaggggtcctaccattttggtgtattgtacgcagtcttcctctgttttttacacaagaggcggtttccaagacttgaacctgtgac 21566439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 35203536 - 35203437
Alignment:
Q  21 gttcgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||| ||||||| |||||||||||  ||| |||||||||||| |||| ||||||||| |||||||||  |||||||||||| ||||||||||||||||||    
T  35203536 gttcaggaagggatcccaccatttttggtatattgtacgcagtcttatcctgttttttacacaagagaatgtttccaggacttgaacccgtgacctttca 35203437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 42495916 - 42495972
Alignment:
Q  61 ccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  42495916 ccttaccctgtttttatacaagaggctgtttccaggacttgaacccgtgacctttca 42495972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 22699018 - 22699107
Alignment:
Q  31 gggtcccaccattt--ggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||||||  |||||||||||||||| ||||||||| |||||||||||||| || |||||||||| ||||||| | ||||||||    
T  22699018 gggtcccaccatttttggtgtattgtacgcagtcttaccctgttttttacacaagagactatttccaggacttgaacccataacctttca 22699107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 39123994 - 39123896
Alignment:
Q  17 cagggttcgggaaggggtcccaccattt--ggtgtattgtacgcagcctt----accctgtttttacacaagaggctgtttccaggacatgaacccgtg 109  Q
    |||||| |||||||||||||||||||||  |||||||| |||||||||||    |||||||||||||||||||| | ||||| ||||| ||||||||||    
T  39123994 cagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttctaggacttgaacccgtg 39123896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 21139788 - 21139851
Alignment:
Q  21 gttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagag 84  Q
    |||||||||||||||||||||||||||||| ||||  || |||||| |||||||||||||||||    
T  21139788 gttcgggaaggggtcccaccatttggtgtactgtatccaaccttactctgtttttacacaagag 21139851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 64
Target Start/End: Original strand, 27889352 - 27889399
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagcctt 64  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  27889352 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagcctt 27889399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 22065682 - 22065609
Alignment:
Q  21 gttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttcca 94  Q
    ||||||||||||||| ||| ||||| | ||||||| ||||| ||||||| ||||||||||||||| ||||||||    
T  22065682 gttcgggaaggggtctcactatttgctttattgtatgcagctttaccctatttttacacaagaggttgtttcca 22065609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 5180218 - 5180294
Alignment:
Q  42 tttggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||| |||||| ||| |||||||||||||| |||||||||||||||||||| |  ||||||| ||||||||||    
T  5180218 tttggtgtgttgtacacagtcttaccctgtttttgacacaagaggctgtttccagaagttgaacccttgacctttca 5180294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 14732857 - 14732959
Alignment:
Q  17 cagggttcgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacct 113  Q
    ||||||||||||||| ||  ||||||||  ||||||||| ||||||||||||||||||||| |||   ||||||||||||||||| ||||||| |||| |    
T  14732857 cagggttcgggaaggagtttcaccatttttggtgtattg-acgcagccttaccctgttttttacatgggaggctgtttccaggacttgaacccatgactt 14732955  T
Q  114 ttca 117  Q
    ||||    
T  14732956 ttca 14732959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 44123672 - 44123758
Alignment:
Q  31 gggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||  || |||||||||  | ||| ||||||| ||||||||||||||||||||||||||| || ||||||||| | ||||||    
T  44123672 gggtcccattatatggtgtatttcatgcaaccttaccttgtttttacacaagaggctgtttccagtacttgaacccgtaatctttca 44123758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 114
Target Start/End: Original strand, 7794582 - 7794640
Alignment:
Q  59 agccttaccctgttttt---acacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||||||||||||||   ||| ||||||||||||||||||| |||||||||||||||    
T  7794582 agccttaccctgttttttttacataagaggctgtttccaggacttgaacccgtgacctt 7794640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 42101920 - 42102009
Alignment:
Q  17 cagggttcgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaac 104  Q
    |||||| |||||| ||||||||||| ||| | ||| |||||||||  ||||||||||||| ||  ||||||||||||||||||| |||||    
T  42101920 cagggtccgggaaagggtcccaccactttagagtactgtacgcagtgttaccctgttttttacggaagaggctgtttccaggacttgaac 42102009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 114
Target Start/End: Original strand, 1423972 - 1424044
Alignment:
Q  43 ttggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||||| |||| ||||| |||||||||||| ||||||| || ||||||||||||  |||| ||||||||||    
T  1423972 ttggtgtagtgtatgcagcattaccctgttttttacacaacagactgtttccaggatttgaatccgtgacctt 1424044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 117
Target Start/End: Complemental strand, 7193127 - 7193083
Alignment:
Q  73 tttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||||| |||||| ||||| ||||||||||||||||||    
T  7193127 tttacacaagaggttgtttcgaggacttgaacccgtgacctttca 7193083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 17048858 - 17048910
Alignment:
Q  24 cgggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgttttt 75  Q
    ||||||||||| ||||||||| ||||||||||||| | |||||||||||||||    
T  17048858 cgggaaggggttccaccattttggtgtattgtacgtaaccttaccctgttttt 17048910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 23604553 - 23604612
Alignment:
Q  34 tcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttcca 94  Q
    |||||||||||| |||||||| | ||  |||||||||||||||||||||||| ||||||||    
T  23604553 tcccaccatttgatgtattgt-cacaatcttaccctgtttttacacaagaggttgtttcca 23604612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 3469220 - 3469316
Alignment:
Q  26 ggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctg---tttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||| ||||||  ||||||||||||||| || |||||||   ||||||||||||||  |||||| ||||| |||  | |||||||||||    
T  3469220 ggaaggggtcccgccatttttggtgtattgtacgcaaccgtaccctgttttttttacacaagagaatgtttctaggacttgagtctgtgacctttca 3469316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 33500614 - 33500556
Alignment:
Q  17 cagggttcgggaaggggtcccacca--tttggtgtattgtacgcagccttaccctgttt 73  Q
    |||||| ||||||||||||||||||  ||| |||||| |||||||| ||||||||||||    
T  33500614 cagggtccgggaaggggtcccaccattttttgtgtatagtacgcagtcttaccctgttt 33500556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 36267853 - 36267900
Alignment:
Q  17 cagggttcgggaag-gggtcccaccatttggtgtattgtacgcagcct 63  Q
    |||||||||||||  |||||| ||||||||||||||||||||||||||    
T  36267853 cagggttcgggaaatgggtccaaccatttggtgtattgtacgcagcct 36267900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 1e-40; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 32703521 - 32703422
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  32703521 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 32703423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 26 - 114
Target Start/End: Complemental strand, 41014408 - 41014320
Alignment:
Q  26 ggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  41014408 ggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacctt 41014320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 8170020 - 8170118
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||    
T  8170020 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaaaaggctgtttccaggacttgaacccgtgacctttc 8170118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 24448989 - 24448891
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-gtttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||| |||||||||||||||    
T  24448989 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctattttttacacaaaaggctgtttccaggacttgaacccgtgacctt 24448891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 35710403 - 35710311
Alignment:
Q  24 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||    
T  35710403 cgggaaggggtcccaccatttggtgtattgaacgcagccttaccct-attttacacaagaggctgtttccaggacttgaacccgtgacctttca 35710311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 27328853 - 27328750
Alignment:
Q  17 cagggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacct 113  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||| |||||||    
T  27328853 cagggttcgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagagactgtttccaggacttgaacctgtgacct 27328754  T
Q  114 ttca 117  Q
    ||||    
T  27328753 ttca 27328750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 38879682 - 38879579
Alignment:
Q  17 cagggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacct 113  Q
    |||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||    
T  38879682 cagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttatacaagaggctgtttccaggacttgaacccgtgacct 38879583  T
Q  114 ttca 117  Q
    ||||    
T  38879582 ttca 38879579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 43334304 - 43334200
Alignment:
Q  17 cagggttcgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgttttt--acacaagaggctgtttccaggacatgaacccgtgacc 112  Q
    |||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||  ||||| ||||||||||||||||| |||||||||||||    
T  43334304 cagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttttacacaggaggctgtttccaggacttgaacccgtgacc 43334205  T
Q  113 tttca 117  Q
    |||||    
T  43334204 tttca 43334200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 19142986 - 19143067
Alignment:
Q  24 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacc 105  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  19142986 cgggaaggggtcccaccatttggtgtactgtacgcagccttaccctgtttttacacaagaggttgtttccaggacttgaacc 19143067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 114
Target Start/End: Original strand, 4619142 - 4619240
Alignment:
Q  19 gggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||    
T  4619142 gggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctatttccaggacttgaacccgtgacctt 4619240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 7097796 - 7097870
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgttt 91  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  7097796 cagggttcgggaaggggtctcaccatttggtgtattgtacgcaaccttaccctgtttttacacaagaggctgttt 7097870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 7368495 - 7368415
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggac 98  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7368495 cagggtccgggaaggggtcccaccaattggtgtattgtacgcagccttaccctg-ttttacacaagaggctgtttccaggac 7368415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 43574705 - 43574609
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggacatgaacccgtgacc 112  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||  |||||||||||| ||||| |||||||    
T  43574705 cagggtccgggaaggggtcccaccatttggtatattgtacgcagccttaccctgttttctacacaagagattgtttccaggacttgaacacgtgacc 43574609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 29 - 117
Target Start/End: Original strand, 22907913 - 22908001
Alignment:
Q  29 aggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||  |||| ||||||| ||||||||||    
T  22907913 aggggtcccaccatttggtgtattgtatgcaaccttactctgtttttacacaagaggctgtttcttggacttgaacccttgacctttca 22908001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 2838877 - 2838802
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttc 92  Q
    |||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  2838877 cagggtccgagaagggatcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagatgctgtttc 2838802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 19 - 106
Target Start/End: Original strand, 13801805 - 13801895
Alignment:
Q  19 gggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaaccc 106  Q
    |||| ||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||    
T  13801805 gggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgcttccaggacttgaaccc 13801895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 1850738 - 1850638
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| | ||||| |||||||||||||| ||||||||||||| |||||  |||||||||||||||||| | ||||| |||| |||||||||||||||||    
T  1850738 cagggtccaggaagtggtcccaccatttgatgtattgtacgcacccttattctgtttttacacaagaggttatttccgggacttgaacccgtgacctttc 1850639  T
Q  117 a 117  Q
    |    
T  1850638 a 1850638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 17 - 115
Target Start/End: Original strand, 208963 - 209062
Alignment:
Q  17 cagggttcgggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgaccttt 115  Q
    |||||| | ||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| |||||  |||||||||    
T  208963 cagggtccaggaaggggtcccaccattttggtgtattgaatgcagccttaccctgtttttacacaagaggttgttgccaggacttgaacttgtgaccttt 209062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 37024626 - 37024691
Alignment:
Q  51 ttgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  37024626 ttgtacgcagccttaccctgtttt-acacaagaggctgtttccaggacttgaacccgtgacctttca 37024691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 20135703 - 20135623
Alignment:
Q  19 gggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccagg 96  Q
    |||| ||||||||||||||||||||  |||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  20135703 gggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgttttttacacaagaggctgtttccagg 20135623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 29334495 - 29334415
Alignment:
Q  17 cagggttcgggaaggggtcccaccatt-tggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccag 95  Q
    |||||| |||||| ||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  29334495 cagggtccgggaatgggtcccaccattctggtgtattgtacgcagccttaccttgttttttacacaagaggctgtttccag 29334415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 1565531 - 1565429
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--tttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||| |||||||||||||| |||||||||| ||||||||||||||||   ||  ||||||| ||||||| |||||||||||| |||||||| ||||||    
T  1565531 cagggtccgggaaggggtcccgccatttggtgcattgtacgcagccttaatatgtttttttactcaagaggttgtttccaggacttgaacccgcgacctt 1565432  T
Q  115 tca 117  Q
    |||    
T  1565431 tca 1565429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 16880690 - 16880757
Alignment:
Q  24 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtt 90  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16880690 cgggaagtggtcacaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtt 16880757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 114
Target Start/End: Complemental strand, 22600546 - 22600455
Alignment:
Q  24 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||| |   |||||||||||| ||||||||| |||||    
T  22600546 cgggaagggatcccaccatttggtgtattgtacacagccttaccctgtgttttacacaaaatattgtttccaggacttgaacccgtaacctt 22600455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 25 - 111
Target Start/End: Complemental strand, 41426039 - 41425952
Alignment:
Q  25 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacatgaacccgtgac 111  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||| | | ||||||||| || ||||||||||||    
T  41426039 gggaaggggtcccaccaattggtgtattgtatgcagccttaccctgttttttacacaataagttgtttccagaacttgaacccgtgac 41425952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 1405286 - 1405188
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-gtttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||||| |||| |||||||||||||||||||||||||||||  ||||| ||  |||||| | |||||| |||||||||||| |||||||||||||||    
T  1405286 cagggttcaggaaagggtcccaccatttggtgtattgtacgcaaacttactctattttttatataagaggttgtttccaggacttgaacccgtgacctt 1405188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 28516477 - 28516571
Alignment:
Q  25 gggaaggggtcccaccatttgg-tgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||| |||||||||||||| | |||||||||||||||| || |||||||| ||||||||||| |||||||| ||| ||||||||||||||||||    
T  28516477 gggaatgggtcccaccattttgatgtattgtacgcagccctagcctgttttttacacaagaggatgtttccaagacttgaacccgtgacctttca 28516571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 34154850 - 34154903
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg 70  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  34154850 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg 34154903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 39301222 - 39301121
Alignment:
Q  18 agggttcgggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggacatgaacccgtgaccttt 115  Q
    ||||| ||||||||||||||||| ||| |||| ||| |||||| |||||||||||||| ||||||||||| |||| ||| ||| ||||||||||||||||    
T  39301222 agggtccgggaaggggtcccacctttttggtgcattatacgcatccttaccctgttttatacacaagaggttgttcccaagacttgaacccgtgaccttt 39301123  T
Q  116 ca 117  Q
    ||    
T  39301122 ca 39301121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 34074598 - 34074699
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggacatgaacccgtgaccttt 115  Q
    ||||||| ||||||||| ||  ||||||||||||||| ||||| ||||||  |||||| |||||||||||||||||| ||||| |||||  |||||||||    
T  34074598 cagggtttgggaaggggccctgccatttggtgtattgaacgcaaccttactgtgttttttacacaagaggctgtttctaggacttgaacttgtgaccttt 34074697  T
Q  116 ca 117  Q
    ||    
T  34074698 ca 34074699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 22025601 - 22025541
Alignment:
Q  58 cagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||    
T  22025601 cagccttaccctgttttttacacaagaggctgtttccaggacttgaacccatgacctttca 22025541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 22187359 - 22187283
Alignment:
Q  42 tttggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||||||||||| |||| | ||||||| ||||||||||||||||||||||| | |||| |||||||||||    
T  22187359 tttggtgtattgtacgcagtcttatcatgttttttacacaagaggctgtttccaggacttaaaccggtgacctttca 22187283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 42924895 - 42924971
Alignment:
Q  42 tttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||||||| |||||||||| ||||||||||||| | ||||| |||||| ||||| ||||||||||||    
T  42924895 tttggtgtattgtacgcaaccttaccctgttttttacacaagatgttgttttcaggacttgaactcgtgacctttca 42924971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 5873365 - 5873435
Alignment:
Q  24 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttcca 94  Q
    |||| ||| ||||||||| |||||||| |||||  ||||||||||| ||||||||||||||||||||||||    
T  5873365 cggggaggagtcccaccaattggtgtagtgtacttagccttaccctatttttacacaagaggctgtttcca 5873435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 22861705 - 22861803
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    ||||||||| ||||||||||||||||||| ||||||||  |||| ||||  ||  ||||||||||||| ||| ||| ||||| |||| ||||||||||||    
T  22861705 cagggttcgagaaggggtcccaccatttgatgtattgtgagcagtctta--cttgttttacacaagagactgcttctaggacttgaatccgtgacctttc 22861802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 12575696 - 12575779
Alignment:
Q  17 cagggttcgggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgttt--ttacacaagaggctgtttccagga 97  Q
    |||||| | ||||||||||||||||||| ||||||||||||||| | ||| |||||||  |||| |||||||||||||||||||    
T  12575696 cagggtccaggaaggggtcccaccattttggtgtattgtacgcaactttagcctgtttatttacgcaagaggctgtttccagga 12575779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 24323749 - 24323829
Alignment:
Q  25 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacatgaac 104  Q
    ||||||||||||||| |||||| ||||| ||||||  |||||||||| |||||||||||||| ||||||||| || |||||    
T  24323749 gggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaagaggttgtttccagaacttgaac 24323829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 24360373 - 24360453
Alignment:
Q  25 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacatgaac 104  Q
    ||||||||||||||| |||||| ||||| ||||||  |||||||||| |||||||||||||| ||||||||| || |||||    
T  24360373 gggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaagaggttgtttccagaacttgaac 24360453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 3771431 - 3771380
Alignment:
Q  24 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt 75  Q
    |||||||||||||||||| |||||||||||| | ||||||||||||||||||    
T  3771431 cgggaaggggtcccaccaattggtgtattgttcacagccttaccctgttttt 3771380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 23974840 - 23974781
Alignment:
Q  56 cgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||||||||||| ||||| |||||||||| |||||||||||| |||||||||||||||    
T  23974840 cgcagccttaccctcttttttacacaagaggttgtttccaggacttgaacccgtgacctt 23974781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 11657735 - 11657785
Alignment:
Q  17 cagggttcgggaaggggtcccacca-tttggtgtattgtacgcagccttac 66  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  11657735 cagggttcgggaaggggtcccaccattttggtgtattgtatgcagccttac 11657785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 30006417 - 30006323
Alignment:
Q  24 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtt-tttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||||||||||||| ||||| ||||| ||||||||||||||| |||| | |||||| ||||| | |||| |||| |  ||||||||||    
T  30006417 cgggaaggggtcccaccatttagtgtaatgtacacagccttaccctgttgtttatataagaggttgttttccggacttgaatctatgacctttca 30006323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 12006372 - 12006467
Alignment:
Q  25 gggaaggggtcccaccatt--tggtgtattgtacgcagccttaccct-gtttttacacaagaggctgtttccaggacatgaa-cccgtgacctttca 117  Q
    |||||||||||||||||||  |||||||||||| | |||||||||||  |||||||| |||||| |||||||| ||| |||| ||||||||||||||    
T  12006372 gggaaggggtcccaccattattggtgtattgtatggagccttaccctattttttacataagaggttgtttcca-gacttgaaccccgtgacctttca 12006467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 56
Target Start/End: Complemental strand, 16957413 - 16957374
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtac 56  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  16957413 cagggtccgggaaggggtcccaccatttggtgtattgtac 16957374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 12477163 - 12477205
Alignment:
Q  24 cgggaaggggtcccaccattt-ggtgtattgtacgcagcctta 65  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  12477163 cgggaaggggtcccaccattttggtgtattgtacgcagcctta 12477205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 9794424 - 9794471
Alignment:
Q  27 gaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 74  Q
    |||||| |||||| ||||||||||||||| |||| |||||||||||||    
T  9794424 gaagggatcccactatttggtgtattgtatgcagtcttaccctgtttt 9794471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 98
Target Start/End: Original strand, 24903739 - 24903814
Alignment:
Q  24 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-gtttttacacaagaggctgtttccaggac 98  Q
    |||||||||||| ||||| |||||| ||||||| ||  ||||||||  ||||||||||| ||||||||| ||||||    
T  24903739 cgggaaggggtctcaccaattggtggattgtacacaatcttaccctattttttacacaaaaggctgttttcaggac 24903814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 113
Target Start/End: Complemental strand, 31299705 - 31299634
Alignment:
Q  42 tttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacct 113  Q
    |||| ||||||||||||||  |||| ||||||| | ||||||||||||||| ||||| |||||  |||||||    
T  31299705 tttgatgtattgtacgcagttttacactgttttaatacaagaggctgtttctaggacttgaactagtgacct 31299634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 18698675 - 18698609
Alignment:
Q  49 tattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||| |||||| |||| ||||||||||  ||||||||||| ||| || ||||||||||||| ||||    
T  18698675 tattgtatgcagccgtaccttgtttttaca--agaggctgttttcagtacttgaacccgtgaccgttca 18698609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Original strand, 3176803 - 3176839
Alignment:
Q  30 ggggtcccaccatttggtgtattgtacgcagccttac 66  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  3176803 ggggtcccaccagttggtgtattgtacgcaaccttac 3176839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 24313616 - 24313712
Alignment:
Q  24 cgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgtttt-tacacaa-gaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||||||| |||||||||||| ||||| ||||| | |||||| |||| || | || |||||||| ||| ||||| | ||||||||||    
T  24313616 cgggaaggggtcccaccattttggtgtattgaacgcaaccttatcttgttttctacagaagggggttgtttccaagacttgaacacatgacctttca 24313712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 24355953 - 24356049
Alignment:
Q  24 cgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgtttt-tacacaa-gaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||||||| |||||||||||| ||||| ||||| | |||||| |||| || | || |||||||| ||| ||||| | ||||||||||    
T  24355953 cgggaaggggtcccaccattttggtgtattgaacgcaaccttatcttgttttctacagaagggggttgtttccaagacttgaacacatgacctttca 24356049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 37226000 - 37226064
Alignment:
Q  20 ggttcgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgtttttacacaaga 83  Q
    |||||||||||||||||||||| |||| |||||||||| ||  |||||||  |||||| ||||||    
T  37226000 ggttcgggaaggggtcccaccattttgttgtattgtacacattcttacccaatttttatacaaga 37226064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 3e-38; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 1347061 - 1346962
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||    
T  1347061 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagtggctgtttccaggacttgaacccgtgacctttc 1346963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 1354793 - 1354892
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  1354793 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagaggctgtttccaggacttgaaccagtgacctttc 1354891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 29355891 - 29355994
Alignment:
Q  17 cagggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgttt-ttacacaagaggctgtttccaggacatgaacccgtgacct 113  Q
    |||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  29355891 cagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttcttacacaagaggctgtttccaggacttgaacccgtgacct 29355990  T
Q  114 ttca 117  Q
    ||||    
T  29355991 ttca 29355994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 12221951 - 12222054
Alignment:
Q  17 cagggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggacatgaacccgtgacct 113  Q
    |||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||    
T  12221951 cagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaagacttgaacccgtgacct 12222050  T
Q  114 ttca 117  Q
    ||||    
T  12222051 ttca 12222054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 9161223 - 9161121
Alignment:
Q  17 cagggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||| || |||||||||||||||||  || |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  9161223 cagggtccgagaaggggtcccaccattattgatgtattgtacgcagccttactctgtttttacacaagaggctgtttccaggacttgaacctgtgacctt 9161124  T
Q  115 tca 117  Q
    |||    
T  9161123 tca 9161121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 28007722 - 28007628
Alignment:
Q  20 ggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgaccttt 115  Q
    |||| |||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||    
T  28007722 ggttagggaaggggtcccagcatttggtgtattgtacgcagcctgaccctg-ttttacacaagaggctctttccaggacttgaacccgtgaccttt 28007628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 2166447 - 2166549
Alignment:
Q  18 agggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    ||||| ||||||||||||||||||||  |||||||||||||||| ||||| ||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  2166447 agggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaacccgtgacctt 2166546  T
Q  115 tca 117  Q
    |||    
T  2166547 tca 2166549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 2178080 - 2178182
Alignment:
Q  18 agggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    ||||| ||||||||||||||||||||  |||||||||||||||| ||||| ||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  2178080 agggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaacccgtgacctt 2178179  T
Q  115 tca 117  Q
    |||    
T  2178180 tca 2178182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 26097257 - 26097178
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccagga 97  Q
    |||||| ||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26097257 cagggtccgggaaggggtcccttcatttggtgtattgtacgcagccttaccctg-ttttacacaagaggctgtttccagga 26097178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 3815114 - 3815214
Alignment:
Q  18 agggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-gtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||||||||| |||||||||||||||||||||||||||||| | |||| |  ||||||||||| || ||||||||||||| |||||||||||| ||||    
T  3815114 agggttcgggaaagggtcccaccatttggtgtattgtacgcagtcgtaccatattttttacacaatagtctgtttccaggacttgaacccgtgacatttc 3815213  T
Q  117 a 117  Q
    |    
T  3815214 a 3815214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 25557822 - 25557743
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccagga 97  Q
    |||||| ||||||||||| ||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  25557822 cagggtccgggaaggggttccttcatttggtgtattgtacgcagccttaccctg-ttttacacaagaggctgtttccagga 25557743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 7947414 - 7947509
Alignment:
Q  24 cgggaaggggtcccaccattt-ggtgtattgtacgcagccttaccct-gtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||| |||| |||||||||||  |||||| |||||||||||    
T  7947414 cgggaagggggcccaccattttggtgtattgtacgcagccttaccctggtttttacacaggaggttgtttccaggagttgaaccggtgacctttca 7947509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 15866075 - 15866174
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgaccttt 115  Q
    |||||| ||||||||||||||||||||||||||||  |||||||| |||||||| |||||||  ||||||||||||||||||  ||||||| ||||||||    
T  15866075 cagggtccgggaaggggtcccaccatttggtgtat--tacgcagctttaccctgttttttacttaagaggctgtttccaggaattgaacccatgaccttt 15866172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 26 - 115
Target Start/End: Original strand, 18277238 - 18277328
Alignment:
Q  26 ggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgaccttt 115  Q
    ||||||||||||||||||||||||  ||||| || |||||||||| |||||||||||||||||||||||| ||  ||||||||||||||||    
T  18277238 ggaaggggtcccaccatttggtgttctgtactcaaccttaccctgatttttacacaagaggctgtttccaagatttgaacccgtgaccttt 18277328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 27 - 117
Target Start/End: Original strand, 23240870 - 23240959
Alignment:
Q  27 gaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||||||| ||||| |||||||||||  ||||||||||||| ||||||||||||||||||||||| || ||| |||||||||||    
T  23240870 gaaggggtcccaccaattggtatattgtacgcaaacttaccctgtttt-acacaagaggctgtttccaggacttgcacctgtgacctttca 23240959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 17 - 110
Target Start/End: Complemental strand, 33138932 - 33138838
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtga 110  Q
    |||||| ||| || |||||||||||||||||||||||||||| ||||||| ||| |||||| |||||||| |||||||||||| |||||||||||    
T  33138932 cagggtccggaaaagggtcccaccatttggtgtattgtacgcggccttactctgttttttatacaagaggttgtttccaggacttgaacccgtga 33138838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 13905016 - 13905116
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgaccttt 115  Q
    ||||||||||||| |||||| ||||||||||| |||||| |||||||||||||| |||||||||||||||  |||| |||||| ||| ||||||||||||    
T  13905016 cagggttcgggaaagggtcc-accatttggtgaattgtatgcagccttaccctgttttttacacaagaggtcgttttcaggacttgagcccgtgaccttt 13905114  T
Q  116 ca 117  Q
    ||    
T  13905115 ca 13905116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 25 - 105
Target Start/End: Complemental strand, 32579516 - 32579436
Alignment:
Q  25 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacc 105  Q
    |||||||||||||||||||||| ||||||||||||| |||||| | |||||| || |||||||||||||||||| ||||||    
T  32579516 gggaaggggtcccaccatttggggtattgtacgcaggcttaccgtatttttataccagaggctgtttccaggacttgaacc 32579436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 48 - 117
Target Start/End: Complemental strand, 8409311 - 8409241
Alignment:
Q  48 gtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||| |||||||||||||    
T  8409311 gtattgtacgcagccttaccctgttttttacacaagaggcagtttccaggacttgaatccgtgacctttca 8409241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 15865893 - 15865992
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--tttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||| | ||||||||||||||||||||||||||  |||||||| ||||||||  |||||||  ||||||||||||||||||  ||||||| |||||||    
T  15865893 cagggtccaggaaggggtcccaccatttggtgtat--tacgcagctttaccctgtttttttacgtaagaggctgtttccaggaattgaacccatgacctt 15865990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 1941941 - 1941879
Alignment:
Q  30 ggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgttt 91  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||    
T  1941941 ggggtcccaccattcggtgtattgtacgcagccttaccctgttttttacacaagaggttgttt 1941879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 12889525 - 12889424
Alignment:
Q  18 agggttcgggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgttttta-cacaagaggctgtttccaggacatgaacccgtgaccttt 115  Q
    ||||| ||| ||||||||||| | ||| ||||||||||| |||||||| ||||||||||| ||||||||||||||| || ||| |||||| |||||||||    
T  12889525 agggtccggaaaggggtcccatcgtttaggtgtattgtatgcagccttgccctgtttttaacacaagaggctgttttcaagacttgaacctgtgaccttt 12889426  T
Q  116 ca 117  Q
    ||    
T  12889425 ca 12889424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 27 - 115
Target Start/End: Complemental strand, 14553602 - 14553511
Alignment:
Q  27 gaaggggtcccacca--tttggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgaccttt 115  Q
    |||||||||||||||  ||||||||||| ||| |||||||||||| ||||| |||||||| ||| |||||||||| |||||| |||||||||    
T  14553602 gaaggggtcccaccagttttggtgtattatacacagccttaccctattttttacacaagaagctatttccaggacttgaacctgtgaccttt 14553511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 24097676 - 24097579
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgaccttt 115  Q
    |||||| |||||||||||||||||||||||    ||||| |||||||||||||| |||||| ||||||||||| ||| ||||| | ||| ||||||||||    
T  24097676 cagggtccgggaaggggtcccaccatttgg----ttgtaagcagccttaccctgttttttatacaagaggctggttcgaggacttaaactcgtgaccttt 24097581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 114
Target Start/End: Complemental strand, 6024332 - 6024234
Alignment:
Q  19 gggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||| ||||||| ||||||| ||||  ||||||||||||||||| |||||| ||||||| ||||||||||||||||| ||||  |||| ||||||||||    
T  6024332 gggtccgggaagaggtcccatcattattggtgtattgtacgcagtcttaccatgttttttacacaagaggctgtttctaggatttgaaaccgtgacctt 6024234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 20400765 - 20400665
Alignment:
Q  18 agggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    ||||||||| || ||||||| | |||| ||||| ||||||||| |||||||||| |||||||||||||  ||||||||  || |||||| ||||||||||    
T  20400765 agggttcggaaaagggtcccgctatttagtgtactgtacgcagtcttaccctgttttttacacaagagattgtttccataacttgaacctgtgacctttc 20400666  T
Q  117 a 117  Q
    |    
T  20400665 a 20400665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 11849149 - 11849063
Alignment:
Q  21 gttcgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacc 105  Q
    ||||||||||||||||||||| |||||||||||||  ||| | ||| ||||||||| |||||||||| ||||||| |||| ||||||    
T  11849149 gttcgggaaggggtcccaccattttggtgtattgtgggcaactttatcctgtttttaacacaagaggttgtttcctggacttgaacc 11849063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 9671120 - 9671196
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttgg-tgtattgtacgcagccttaccctgtttt-tacacaagaggctgttt 91  Q
    |||||||||| ||||||||| ||||||| | ||||  ||| |||||||||||||||||| |||||||||||||||||    
T  9671120 cagggttcggaaaggggtcctaccattttgatgtaaagtaggcagccttaccctgttttttacacaagaggctgttt 9671196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 114
Target Start/End: Original strand, 14975171 - 14975214
Alignment:
Q  71 tttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||||||||||||||||||||||||| |||| ||||||||||    
T  14975171 tttttacacaagaggctgtttccaggacttgaatccgtgacctt 14975214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 22967265 - 22967172
Alignment:
Q  27 gaaggggtcccaccatttggtgtat------tgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||||||||||||||||||||||      |||| ||||||||| ||| ||||||||||||| | |||||||| ||| |||||  ||||||||    
T  22967265 gaaggggtcccaccatttggtgtattgtatttgtatgcagccttatcctatttttacacaagaagttgtttccatgacttgaactagtgacctt 22967172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 23821128 - 23821221
Alignment:
Q  27 gaaggggtcccaccatttggtgta------ttgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    ||||||||||||||||||||||||      ||||| ||||||||| ||| ||||||||||||| | |||||||| ||| |||||  ||||||||    
T  23821128 gaaggggtcccaccatttggtgtattgtatttgtatgcagccttatcctatttttacacaagaagttgtttccatgacttgaactagtgacctt 23821221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 17432395 - 17432338
Alignment:
Q  61 ccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||||||| |||||||| | |||||||||||| |||||| |||||||||||    
T  17432395 ccttaccctgttttttacacaagatgttgtttccaggacttgaacctgtgacctttca 17432338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 17448389 - 17448322
Alignment:
Q  51 ttgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||||||||||||| |||||||||| | | ||||| ||  || ||||||||||||||||||    
T  17448389 ttgtacgcagccttaccctgttttttacacaaaatgttgttttcaaaacttgaacccgtgacctttca 17448322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 18254607 - 18254556
Alignment:
Q  27 gaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttaca 78  Q
    ||||||||||||| |||| | |||||||| ||||| ||||||||||||||||    
T  18254607 gaaggggtcccactattttgggtattgtatgcagctttaccctgtttttaca 18254556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 117
Target Start/End: Complemental strand, 12063511 - 12063465
Alignment:
Q  71 tttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||| |||||||||| |||| ||||| ||||||||||||||||||    
T  12063511 tttttatacaagaggctatttctaggacttgaacccgtgacctttca 12063465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 12228449 - 12228379
Alignment:
Q  25 gggaaggggtcccaccatttggtgtattgtacgcagccttaccct-gtttttacacaagaggctgtttcca 94  Q
    ||||||||||||||| || |||||||||||||||| | ||| |||  |||||| ||||||| |||||||||    
T  12228449 gggaaggggtcccactatctggtgtattgtacgcaactttatcctattttttaaacaagagtctgtttcca 12228379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 75
Target Start/End: Original strand, 14341134 - 14341164
Alignment:
Q  45 ggtgtattgtacgcagccttaccctgttttt 75  Q
    |||||||||||||||||||||||||||||||    
T  14341134 ggtgtattgtacgcagccttaccctgttttt 14341164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 98
Target Start/End: Complemental strand, 19340918 - 19340845
Alignment:
Q  26 ggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggac 98  Q
    ||||||||||||| ||||| ||||||||||  ||| ||||||||||||||| ||||||||||||| ||| |||||    
T  19340918 ggaaggggtcccatcattttggtgtattgtt-gcaaccttaccctgttttttacacaagaggctggttctaggac 19340845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 23930163 - 23930205
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgca 59  Q
    |||||| || |||||||||||||||| ||||||||||||||||    
T  23930163 cagggtccgtgaaggggtcccaccatctggtgtattgtacgca 23930205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 24734736 - 24734683
Alignment:
Q  24 cgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgttttt 75  Q
    ||||||||||||||||| |||  | ||||||||||||| |||||||||||||||    
T  24734736 cgggaaggggtcccaccttttttgttgtattgtacgcaaccttaccctgttttt 24734683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 32728211 - 32728293
Alignment:
Q  36 ccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||| ||||||| |||||||| ||| ||||||||| |||||||| |||||| ||||||||  || |||| | |||||||||||    
T  32728211 ccactatttggtatattgtacacagtcttaccctgttttttacataagaggttgtttccaaaacttgaatctgtgacctttca 32728293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 13267824 - 13267788
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattg 53  Q
    |||||| | ||||||||||||||||||||||||||||    
T  13267824 cagggtccaggaaggggtcccaccatttggtgtattg 13267788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 24751112 - 24751168
Alignment:
Q  20 ggttcgggaaggggtcccaccatttg-gtgtattgtacgcagccttaccctgttttt 75  Q
    |||||| ||||||||| ||||||||  ||||||||||||||| |||||||| |||||    
T  24751112 ggttcgtgaaggggtctcaccattttagtgtattgtacgcagtcttaccctattttt 24751168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 116
Target Start/End: Complemental strand, 32068182 - 32068095
Alignment:
Q  28 aaggggtcccaccattt-ggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    ||||||||||||||||| |||||||||||  |||| ||| |||| ||||||||||||||   ||||||| ||| |||||  ||||||||||    
T  32068182 aaggggtcccaccattttggtgtattgtaaacagcattatcctgttttttacacaagag---gtttccaagacttgaacatgtgacctttc 32068095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 3e-38; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 1217209 - 1217110
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  1217209 cagggtccgggaaggggtcccgccatttggtgtattgtacgcagccttaccctg-ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 1217111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 24 - 114
Target Start/End: Complemental strand, 22609879 - 22609789
Alignment:
Q  24 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||    
T  22609879 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaagacttgaacccgttacctt 22609789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 26869816 - 26869727
Alignment:
Q  28 aaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||    
T  26869816 aaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacaccagaggctgtttccaggacttgaacctgtgacctttca 26869727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 13628826 - 13628929
Alignment:
Q  17 cagggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgttt-ttacacaagaggctgtttccaggacatgaacccgtgacct 113  Q
    |||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  13628826 cagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttcttacacaagaggctgtttccaggacttgaacccgtgacct 13628925  T
Q  114 ttca 117  Q
    ||||    
T  13628926 ttca 13628929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 22122953 - 22123052
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||| ||||||||    
T  22122953 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagagactgtttccaggacttgaacccgcgacctttc 22123051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 40272848 - 40272946
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||| |||||||    
T  40272848 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccatgacctt 40272946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 115
Target Start/End: Original strand, 46421071 - 46421172
Alignment:
Q  17 cagggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggacatgaacccgtgacct 113  Q
    |||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  46421071 cagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacct 46421170  T
Q  114 tt 115  Q
    ||    
T  46421171 tt 46421172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 26573248 - 26573147
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacatgaacccgtgaccttt 115  Q
    |||||| ||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||    
T  26573248 cagggtccgggatggggtcccaccaattggtgtattgtacgcagccttaccctgttttttacacaggaggctgtttccaggacttgaacccgtgaccttt 26573149  T
Q  116 ca 117  Q
    ||    
T  26573148 ca 26573147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 24 - 111
Target Start/End: Complemental strand, 16735554 - 16735467
Alignment:
Q  24 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgac 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||| ||||||||||||    
T  16735554 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttctacaagaggctgtttcgaggacttgaacccgtgac 16735467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 17 - 108
Target Start/End: Complemental strand, 31592968 - 31592878
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgt 108  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  31592968 cagggtccgggaaggagtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagaggctgtttccaggacttgaacccgt 31592878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 34420686 - 34420781
Alignment:
Q  24 cgggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  34420686 cgggaaggggtcccaccattttggtgtatggtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttca 34420781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 115
Target Start/End: Original strand, 29366756 - 29366857
Alignment:
Q  17 cagggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacct 113  Q
    |||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||    
T  29366756 cagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttatacaagaggctgtttccaggacttgaacccgtgacct 29366855  T
Q  114 tt 115  Q
    ||    
T  29366856 tt 29366857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 91
Target Start/End: Complemental strand, 47624162 - 47624088
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgttt 91  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47624162 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgttt 47624088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 33926204 - 33926103
Alignment:
Q  17 cagggttcgggaaggggtcccaccatt-tggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgaccttt 115  Q
    |||||| | |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||    
T  33926204 cagggtccaggaaggggtcccaccattatggtgtattgtacacagccttaccctgtttttacacaagaggctatttccaggacttgaacccatgaccttt 33926105  T
Q  116 ca 117  Q
    ||    
T  33926104 ca 33926103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 39203628 - 39203536
Alignment:
Q  24 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||| |||||| |||||||||||    
T  39203628 cgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctg-ttttacacaagaggctgtttcaaggacttgaacctgtgacctttca 39203536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 6411866 - 6411954
Alignment:
Q  25 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacct 113  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||| ||||||    
T  6411866 gggaaggggtcccatcatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttacaagacttgaacccatgacct 6411954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 8247723 - 8247826
Alignment:
Q  17 cagggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggacatgaacccgtgacct 113  Q
    |||||| |||||||| |||||||||||  |||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  8247723 cagggtccgggaaggagtcccaccattattggtgtattgtacgcaaccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacct 8247822  T
Q  114 ttca 117  Q
    ||||    
T  8247823 ttca 8247826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 114
Target Start/End: Original strand, 13730640 - 13730738
Alignment:
Q  19 gggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||| ||||||||||||||||||||  ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  13730640 gggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctt 13730738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 10795459 - 10795554
Alignment:
Q  17 cagggttcgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacatgaacccgtg 109  Q
    |||||| | |||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  10795459 cagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 10795554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 12914079 - 12914171
Alignment:
Q  25 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||  ||||||||||    
T  12914079 gggaaggggtctcaccatttggtgtattgtacgccgccttaccctgttttttacacaagaggctgtttccaggacttgaacttgtgacctttc 12914171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 54484812 - 54484730
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--tttttacacaagaggctgtttccagga 97  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  54484812 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccttgtttttttacacaagaggctgtttccagga 54484730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 45620881 - 45620966
Alignment:
Q  34 tcccaccatttggtgtattgtacgcagccttaccctgtttt--tacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||| || ||||||||||||||||||    
T  45620881 tcccaccaattggtgtattgtacgcagccttaccctgtttttttacacaagaggctgtttccagaacttgaacccgtgacctttca 45620966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 30928183 - 30928284
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggacatgaacccgtgaccttt 115  Q
    |||||| |||||||||||||| ||| |||||||||| ||| || ||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||    
T  30928183 cagggtccgggaaggggtcccgccaattggtgtattttacacaaccttaccttgttttttacacaagaggctgtttccaggacttgaacccgtgaccttt 30928282  T
Q  116 ca 117  Q
    ||    
T  30928283 ca 30928284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 4495714 - 4495798
Alignment:
Q  31 gggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||| |||||| |||||||||||||||    
T  4495714 gggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaataggctattttcaggacttgaacccgtgacctt 4495798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 39 - 115
Target Start/End: Original strand, 7696945 - 7697020
Alignment:
Q  39 ccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgaccttt 115  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||    
T  7696945 ccatttggtgtattgtacgcagccttaccctg-ttttacacaagagactgtttccaggacttgaacccgtgaccttt 7697020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 54032609 - 54032693
Alignment:
Q  31 gggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    ||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||    
T  54032609 gggtcccaccattcggtgtattgtatgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgacctt 54032693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 54 - 117
Target Start/End: Original strand, 10870025 - 10870088
Alignment:
Q  54 tacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10870025 tacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacctttca 10870088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 15797341 - 15797271
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctg 88  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  15797341 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagaggctg 15797271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 516525 - 516429
Alignment:
Q  25 gggaaggggtcccaccattt---ggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||||| ||||||   ||| |||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  516525 gggaaggggtcccgccattttttggtttattgtgcgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttca 516429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 45948874 - 45948972
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-gtttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||| || ||||||||||||||| ||||||||||||| |||||||||||||  ||||||||||||||| |||||||||||  |||||||||||||||    
T  45948874 cagggtccgagaaggggtcccaccaattggtgtattgtatgcagccttaccctattttttacacaagaggttgtttccaggaattgaacccgtgacctt 45948972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 53996609 - 53996703
Alignment:
Q  25 gggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||| |||||||| ||| ||||| ||||||||||||    
T  53996609 gggaaggggtcccaccattttggtgtattgtaagcagccttaccctgttttttacacaagaggttgtttccacgacttgaacacgtgacctttca 53996703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 54374381 - 54374483
Alignment:
Q  17 cagggttcgggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||| ||||||||||||||||||||| |||| |||||||||||||||||||| |||| ||||||||||| |||||||| ||| |||||| ||||||||    
T  54374381 cagggtccgggaaggggtcccaccattttggtggattgtacgcagccttaccctattttttacacaagaggttgtttccaagacttgaacctgtgacctt 54374480  T
Q  115 tca 117  Q
    |||    
T  54374481 tca 54374483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 105
Target Start/End: Complemental strand, 14987073 - 14986989
Alignment:
Q  24 cgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacatgaacc 105  Q
    |||||| |||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  14987073 cgggaatgggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacc 14986989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 45139520 - 45139615
Alignment:
Q  25 gggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||||||| |||||||||||||| ||||||||  || ||||||||||||||||||    
T  45139520 gggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgtgttttacacaagaggttgtttccaaaacttgaacccgtgacctttca 45139615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 52926255 - 52926344
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||| |||||||||||||||    
T  52926255 cagggtccgggaaggtgtcccaccatttggtgtattgtacgcagccttac--------tacacaagaggctgtttccaggacttgaacccgtgacctt 52926344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 49013511 - 49013589
Alignment:
Q  19 gggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttcca 94  Q
    |||| ||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  49013511 gggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttcca 49013589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 45786250 - 45786327
Alignment:
Q  17 cagggttcgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctg-tttttacacaagaggctgttt 91  Q
    |||||| |||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||    
T  45786250 cagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttacacaagaggctgttt 45786327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 34771400 - 34771457
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 74  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34771400 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 34771457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 52428526 - 52428615
Alignment:
Q  30 ggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccag-gacatgaacccgtgacctttca 117  Q
    ||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||| | ||||||||||||||||    
T  52428526 ggggttccactatttggtgtattgtacgcagccttaccctgtattttacacaagaggctgcttccagagacttaaacccgtgacctttca 52428615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 5173762 - 5173857
Alignment:
Q  24 cgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||| ||||||||||  ||||||||| | ||| ||||||  ||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  5173762 cgggaaggggccccaccatttttggtgtattgcatgcaaccttactttgtttttacacaagaggttgtttccaggacttgaacccgtgacctttca 5173857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 9607318 - 9607223
Alignment:
Q  25 gggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||| ||||  ||||||||| |||||||||||||||||||||| || |||||||||||||||||||| ||||||  ||||||||||    
T  9607318 gggaaggggtcccaacattattggtgtattctacgcagccttaccctgttttttacgcaagaggctgtttccaggacttgaaccgatgacctttca 9607223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 28 - 114
Target Start/End: Complemental strand, 7943100 - 7943013
Alignment:
Q  28 aaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    ||||| |||||||||||| |||||||||||||| |||||||||| ||||| |||||| |||||||||||||| |||| ||||||||||    
T  7943100 aagggatcccaccatttgatgtattgtacgcagtcttaccctgttttttagacaagatgctgtttccaggacttgaatccgtgacctt 7943013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 25944583 - 25944489
Alignment:
Q  25 gggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||||||||| |||||||||||| ||||||| ||| |||||| |||| |||||| ||||||||||| ||||||| ||||||||||    
T  25944583 gggaaggggtcccaccattttggtgtattgtactcagccttgcccagttttttacacgagaggcggtttccaggacttgaacccatgacctttca 25944489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 19731115 - 19731022
Alignment:
Q  25 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||| ||||||||||| | ||||||||||||||| ||||||| ||||||| |||||||||||| |||||||||| || | |||||||||||||    
T  19731115 gggaaagggtcccaccaataggtgtattgtacgcaaccttaccttgttttttacacaagaggctatttccaggacttgcatccgtgacctttca 19731022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 19751691 - 19751598
Alignment:
Q  25 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||| ||||||||||| | ||||||||||||||| ||||||| || ||||||||||||||||| |||||||||| || | |||||||||||||    
T  19751691 gggaaagggtcccaccaataggtgtattgtacgcaaccttaccttgatttttacacaagaggctatttccaggacttgcatccgtgacctttca 19751598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 9276384 - 9276313
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctg 88  Q
    |||||| |||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  9276384 cagggtccgggaaagggtcc-accatttggtgtattgtacgcagccttaccctgttttttacacaagaggctg 9276313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 27 - 117
Target Start/End: Original strand, 8410913 - 8411002
Alignment:
Q  27 gaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||| |||||||||| ||||||||||||  |||||||||||||||||||  ||| ||||| ||||||||||| |||||| |||||||||||    
T  8410913 gaagaggtcccaccagttggtgtattgtgagcagccttaccctgttttt-tacacgaggcagtttccaggacctgaaccggtgacctttca 8411002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 31904906 - 31904976
Alignment:
Q  30 ggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggaca 99  Q
    ||||||||||||||||||||||||||||||| | ||||||| |||||||| || |||||||||||||||||    
T  31904906 ggggtcccaccatttggtgtattgtacgcagtcataccctgttttttacataataggctgtttccaggaca 31904976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 43114918 - 43114994
Alignment:
Q  31 gggtcccaccatttggtgtattgtacgcagcc-ttaccctgtttt--tacacaagaggctgtttccaggacatgaac 104  Q
    ||||||||||||||||||||||||| | |||| ||||||||||||  |||||||||||||||||||||||| |||||    
T  43114918 gggtcccaccatttggtgtattgtaggtagcccttaccctgtttttttacacaagaggctgtttccaggacttgaac 43114994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 55401288 - 55401208
Alignment:
Q  27 gaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacc 105  Q
    |||||||||||||||||| |||||||| ||||||| |||| ||||||||| |||||||||||||||| |||||| ||||||    
T  55401288 gaaggggtcccaccattttggtgtattatacgcagtcttaacctgttttttacacaagaggctgtttacaggacttgaacc 55401208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 353387 - 353445
Alignment:
Q  19 gggttcgggaaggggtcccaccatt--tggtgtattgtacgcagccttaccctgttttt 75  Q
    |||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  353387 gggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttt 353445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 25517213 - 25517287
Alignment:
Q  24 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--tttttacacaagaggctgtttccagg 96  Q
    ||||||||||||||||||||| ||||||||||||||||| || | ||  ||||||||||||||| ||||||||||    
T  25517213 cgggaaggggtcccaccattttgtgtattgtacgcagccatatcttgtttttttacacaagaggatgtttccagg 25517287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 44403592 - 44403691
Alignment:
Q  18 agggttcgggaaggggtcccaccatttggtg-tattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacatgaacccgtgaccttt 115  Q
    ||||| ||||||||||||||||||||| ||| |||| | |||||||||||| ||| |||||||||||||||| || ||||||| | |||| |||||||||    
T  44403592 agggtccgggaaggggtcccaccattttgtggtattctccgcagccttaccttgtcttttacacaagaggctattcccaggactttaacctgtgaccttt 44403691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 12525489 - 12525427
Alignment:
Q  56 cgcagccttaccctg-tttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||||||| ||||||||||||||||||||||||||||  ||||| |||||||||||    
T  12525489 cgcagccttaccctgatttttacacaagaggctgtttccaggactcgaacctgtgacctttca 12525427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 26292451 - 26292382
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggct 87  Q
    |||||||||||||||| ||||| |||||||||||| |||||| | ||||||||| ||||||||||||||||    
T  26292451 cagggttcgggaagggatcccatcatttggtgtatcgtacgcggtcttaccctg-ttttacacaagaggct 26292382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 31831297 - 31831241
Alignment:
Q  38 accatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccag 95  Q
    |||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||    
T  31831297 accatttggtgtattgtatgcagccttaccct-attttacacaagaggctgtttccag 31831241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 29 - 119
Target Start/End: Complemental strand, 33235641 - 33235549
Alignment:
Q  29 aggggtcccaccatttggtgtattgtacgcagccttaccctgt--ttttacacaagaggctgtttccaggacatgaacccgtgacctttcatg 119  Q
    |||||||||||||||| ||||||||||| ||| ||||||||||  |||||||||||||||| ||| || ||  |||||  |||||||||||||    
T  33235641 aggggtcccaccatttagtgtattgtacacagtcttaccctgtttttttacacaagaggctctttacacgatttgaacttgtgacctttcatg 33235549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 117
Target Start/End: Complemental strand, 39212081 - 39212010
Alignment:
Q  47 tgtattgtacgcagccttaccctgtt-tttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||| |||||| |||| ||||||||||||| | |||||||||| |||||||||||| |||||    
T  39212081 tgtattgtacgcagtcttaccttgttatttacacaagaggttatttccaggacttgaacccgtgacatttca 39212010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 829478 - 829555
Alignment:
Q  17 cagggttcgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgtt-tttacacaagaggctgtttc 92  Q
    ||||||||||||||||||||||||| |||||||||||||||||| | ||||  |||| |||| |||||||| ||||||    
T  829478 cagggttcgggaaggggtcccaccattttggtgtattgtacgcaactttactatgttctttagacaagaggttgtttc 829555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 98
Target Start/End: Original strand, 50624998 - 50625071
Alignment:
Q  26 ggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggac 98  Q
    |||||| |||||||||  |||||||||||||||  ||||||||| |||| |||||||||||||||||| |||||    
T  50624998 ggaaggcgtcccaccaaatggtgtattgtacgctaccttacccttttttatacacaagaggctgtttctaggac 50625071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 31672798 - 31672731
Alignment:
Q  33 gtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggaca 99  Q
    |||||||||||||||||||||||||||  ||| || || |||||||| || |||||||||||||||||    
T  31672798 gtcccaccatttggtgtattgtacgcactcttgccttgttttttacataataggctgtttccaggaca 31672731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 21875111 - 21875042
Alignment:
Q  41 atttggtgtattgtacgcagccttaccctgttttt--acacaagaggctgtttccaggacatgaacccgt 108  Q
    |||| |||||||||||||||||||||||| |||||  |||||||||| ||||||||| |  |||||||||    
T  21875111 atttagtgtattgtacgcagccttaccctcttttttaacacaagaggttgtttccagaatttgaacccgt 21875042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 117
Target Start/End: Complemental strand, 53062112 - 53062058
Alignment:
Q  64 taccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||| ||||| ||||||||||||||||| ||||| ||||||||||||    
T  53062112 taccctgtttttgacacaggaggctgtttccaggacttgaacacgtgacctttca 53062058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 1121286 - 1121362
Alignment:
Q  42 tttggtgtattgtacgcagccttaccctgttt-ttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||||||||||| || ||| | ||| |||||||||| | |||||||||||| | ||| ||||||||||||    
T  1121286 tttggtgtattgtacgcagtctcaccttatttcttacacaagaagttgtttccaggacttaaacacgtgacctttca 1121362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 115
Target Start/End: Complemental strand, 29106659 - 29106571
Alignment:
Q  28 aaggggtcccaccatttggtgtattgtacgcagccttaccct-gtttttacacaagaggctgtttccaggacatgaacccgtgaccttt 115  Q
    ||||| |||||| ||||||||||||||||| | ||||| |||  ||||||||||||||| ||||| || ||| || |||||||| ||||    
T  29106659 aagggatcccacaatttggtgtattgtacgtaaccttatcctattttttacacaagaggttgttttcaagacttgtacccgtgatcttt 29106571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 26782464 - 26782386
Alignment:
Q  40 catttggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||||| ||  |||| ||||||| ||||| |||||||||  |||||| ||||| |||| |||||||||||||    
T  26782464 catttggtgtattttatacagcattaccctattttttacacaagagattgtttcaaggacttgaatccgtgacctttca 26782386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 113
Target Start/End: Complemental strand, 35417982 - 35417940
Alignment:
Q  71 tttttacacaagaggctgtttccaggacatgaacccgtgacct 113  Q
    |||||||||||||||||||||||||||  ||||| ||||||||    
T  35417982 tttttacacaagaggctgtttccaggatttgaactcgtgacct 35417940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 30676 - 30577
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  30676 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccctaccctg-ttttacacaagaggctgtttccaggacttgaaccggtgacctttc 30578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 13068 - 13160
Alignment:
Q  25 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||| |||||||||||    
T  13068 gggaaggggtcccaccattcggtgtattgtacgcagccttaccttgtttttacgcaagaggctgtttccaggacttgaaccggtgacctttca 13160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 10086 - 10185
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| |||||||||||||||| |||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  10086 cagggtccgggaaggggtcccactatttggtgtattgtacgcagtcttactctg-ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 10184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 20414 - 20513
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| |||||||||||||||| |||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  20414 cagggtccgggaaggggtcccactatttggtgtattgtacgcagtcttactctg-ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 20512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 11228 - 11129
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttc 116  Q
    |||||| |||||||| ||||||||||||||||||||||| ||||||||||  |||||| ||||||||||||||||||||||| |||||||||||||||||    
T  11228 cagggtccgggaaggtgtcccaccatttggtgtattgtaagcagccttactttgtttt-acacaagaggctgtttccaggacttgaacccgtgacctttc 11130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 67; Significance: 6e-30; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 46930 - 46832
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-gtttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||| ||||||||| || |||||||||||||||    
T  46930 cagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctattttttacacaagaggttgtttccagcacttgaacccgtgacctt 46832  T

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Target: scaffold0057; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 24808 - 24882
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtt 90  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  24808 cagggttcgggaaggggtcccaccatttggtgtgttgtacgcagccttaccctgttttttacacaagaggctgtt 24882  T

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Target: scaffold0057; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 43745 - 43679
Alignment:
Q  28 aaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccag 95  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||    
T  43745 aaggggtcccaccatttggtgtattgtacgcagccttaccttg-ttttacacaagacgctgtttccag 43679  T

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Target: scaffold0015 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 48670 - 48746
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttcca 94  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  48670 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-ttttacacaagaggctgtttcca 48746  T

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Target: scaffold0049 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 59070 - 58975
Alignment:
Q  25 gggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||||||||||||  |||||||||||||||| |||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||    
T  59070 gggaaggggtcccaccatttttggtgtattgtacgcagtcttaccctgttttttatacaagaggctgtttccaggacttgaacccgtgacctttca 58975  T

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Target: scaffold0036 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 26 - 114
Target Start/End: Original strand, 35062 - 35152
Alignment:
Q  26 ggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt--tacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||   ||||||||| |||||| |||||| |||||||||||||||    
T  35062 ggaaagggtcccaccatttggtgtattgtacgcagccttaccctgttttcacacacaagagactgttttcaggacttgaacccgtgacctt 35152  T

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Target: scaffold1176 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 1625 - 1722
Alignment:
Q  19 gggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||| ||||||||||||||| |||||||||||||||| ||||||||| |||| |||||||||||||| ||||| |||||| ||||||| ||||||||||    
T  1625 gggtccgggaaggggtcccatcatttggtgtattgtatgcagccttatcctg-ttttacacaagaggttgttttcaggacttgaacccatgacctttca 1722  T

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Target: scaffold0311 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 10909 - 10811
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacatgaacccgtgacctt 114  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||| ||||| |||  | |||||||||||||||    
T  10909 cagggtccgggaaggggtcccaccatttggtgtattggacgcagccctaccctgttttttacacaagaggttgttttcagaccttgaacccgtgacctt 10811  T

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Target: scaffold0254 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 4258 - 4155
Alignment:
Q  18 agggttcgggaaggggtcccaccattt---ggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacatgaacccgtgacct 113  Q
    ||||| |||||||||||||||||| ||   ||||||||||||||| ||||| ||||| |||||||||||||| |||||||||||| ||||||||||||||    
T  4258 agggtccgggaaggggtcccaccaattattggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaacccgtgacct 4159  T
Q  114 ttca 117  Q
    ||||    
T  4158 ttca 4155  T

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Target: scaffold0005 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 226456 - 226543
Alignment:
Q  32 ggtcccaccatttggtgtattgtacgcagccttaccctg--tttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    |||||||||||||| ||||||||| ||||||||||||||  |||||| ||||||||||||||| ||||| |||| |||||||||||||    
T  226456 ggtcccaccatttgatgtattgtatgcagccttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtgacctttca 226543  T

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Target: scaffold0954 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 3643 - 3561
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggac 98  Q
    |||||||||||||||||||||| |||| |||||||| |||||||||||||| | | |||||||||||||||| ||||||||||    
T  3643 cagggttcgggaaggggtcccatcattcggtgtattatacgcagccttaccttatattttacacaagaggctctttccaggac 3561  T

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Target: scaffold0180 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 24169 - 24220
Alignment:
Q  17 cagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccc 68  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24169 cagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccc 24220  T

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Target: scaffold0167 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 23690 - 23597
Alignment:
Q  25 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||||||||||||| |  |||||||||||||| ||||||| |||||||||||||| ||||| || ||| |||||||||  |||||||    
T  23690 gggaaggggtcccaccatttgctacattgtacgcagcctcaccctgttttttacacaagaggttgtttgcaagacttgaacccgtaccctttca 23597  T

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Target: scaffold0018 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 111
Target Start/End: Original strand, 72910 - 72999
Alignment:
Q  24 cgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggc-tgtttccaggacatgaacccgtgac 111  Q
    ||||||||||| | |||||||||||||||||| ||||||||||| || |||||||||||||| | |||||| ||||| ||||||||||||    
T  72910 cgggaaggggtactaccatttggtgtattgtaggcagccttaccgtgttttttacacaagagacttgtttctaggacttgaacccgtgac 72999  T

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Target: scaffold0031 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 43210 - 43127
Alignment:
Q  33 gtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgacctttca 117  Q
    ||||||||||||| |||||||||    | ||||| ||||||||||||||||||||||||| ||||| ||||| ||||||||||||    
T  43210 gtcccaccatttgatgtattgtaaat-gtcttactctgtttttacacaagaggctgtttctaggacctgaactcgtgacctttca 43127  T

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Target: scaffold0867 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0867
Description:

Target: scaffold0867; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 111
Target Start/End: Original strand, 3719 - 3798
Alignment:
Q  31 gggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacatgaacccgtgac 111  Q
    ||||||||||||||||||||||||||||| | ||||| ||| |||||||||| || ||||| ||| || ||||||| ||||    
T  3719 gggtcccaccatttggtgtattgtacgcaacgttaccttgtatttacacaag-ggttgttttcagaacttgaacccatgac 3798  T

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Target: scaffold0050 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 87
Target Start/End: Original strand, 58702 - 58742
Alignment:
Q  47 tgtattgtacgcagccttaccctgtttttacacaagaggct 87  Q
    |||||||||  |||||||||| |||||||||||||||||||    
T  58702 tgtattgtatacagccttaccttgtttttacacaagaggct 58742  T

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