View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6023_high_9 (Length: 296)
Name: NF6023_high_9
Description: NF6023
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6023_high_9 |
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Alignment Details
Target: chr5 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 16 - 278
Target Start/End: Complemental strand, 13235023 - 13234761
Alignment:
| Q |
16 |
atgtttgcattatacaaaacaaattaaattgttaactttatcacacatttttcctctactaggacctttgattttttgatgcaaaacgaagaataatgta |
115 |
Q |
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| T |
13235023 |
atgtttgcattatacaaaagaaattaaattgttaactttatcacacatttttcctctactaggacctttgattttttgatgcaaaacgaagaataatgta |
13234924 |
T |
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| Q |
116 |
aaataaaatcctatatagaacagcccaacctaacattataagcacattgttccttttcttaatctcgtcagtaccaatatgaagacttttcaaaatatca |
215 |
Q |
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| T |
13234923 |
aaataaaatcctatatagaacagcccaacctaacattataagcacattgttccttttcttaatctcttcagtaccaatatgaagacttttcaaaatatca |
13234824 |
T |
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| Q |
216 |
aaaccagtaatagatacaccatcatttgatccaaaagtttcattagtctgatactcattcatc |
278 |
Q |
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| T |
13234823 |
aaaccagtaatagatacaccatcatttgatccaaaagtttcattagtctgatactcattcatc |
13234761 |
T |
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