View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6026_high_27 (Length: 333)

Name: NF6026_high_27
Description: NF6026
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6026_high_27
NF6026_high_27
[»] chr2 (28 HSPs)
chr2 (5-188)||(9293415-9293598)
chr2 (5-190)||(9723446-9723631)
chr2 (5-190)||(35160798-35160984)
chr2 (5-190)||(10661928-10662113)
chr2 (72-188)||(27847675-27847791)
chr2 (5-190)||(33380248-33380432)
chr2 (5-188)||(23267902-23268084)
chr2 (72-188)||(31174740-31174856)
chr2 (72-188)||(7475414-7475530)
chr2 (5-190)||(3989117-3989301)
chr2 (5-188)||(14941204-14941388)
chr2 (5-188)||(21936124-21936307)
chr2 (5-188)||(13354889-13355073)
chr2 (72-172)||(16767378-16767478)
chr2 (72-188)||(43330955-43331071)
chr2 (72-190)||(21393594-21393712)
chr2 (72-159)||(40262642-40262729)
chr2 (74-188)||(22591525-22591639)
chr2 (5-50)||(34320997-34321042)
chr2 (115-188)||(37335756-37335829)
chr2 (5-60)||(16767302-16767357)
chr2 (5-60)||(22592880-22592937)
chr2 (1-50)||(37335824-37335873)
chr2 (153-188)||(22592905-22592940)
chr2 (154-188)||(9293412-9293446)
chr2 (5-50)||(21393525-21393570)
chr2 (5-50)||(43331092-43331137)
chr2 (154-190)||(9723600-9723636)
[»] chr3 (42 HSPs)
chr3 (201-324)||(40327766-40327890)
chr3 (5-190)||(33145753-33145937)
chr3 (5-188)||(3137254-3137436)
chr3 (5-188)||(6041927-6042102)
chr3 (5-188)||(33113836-33114019)
chr3 (5-190)||(2754758-2754944)
chr3 (5-190)||(3089458-3089644)
chr3 (5-190)||(37522094-37522278)
chr3 (72-190)||(42297394-42297513)
chr3 (5-188)||(47738148-47738336)
chr3 (5-190)||(8320422-8320608)
chr3 (5-190)||(22426185-22426368)
chr3 (5-185)||(42297909-42298087)
chr3 (5-159)||(40327897-40328056)
chr3 (72-185)||(30385057-30385170)
chr3 (5-190)||(33839572-33839760)
chr3 (5-190)||(3574366-3574551)
chr3 (72-190)||(3456105-3456223)
chr3 (5-190)||(36864873-36865051)
chr3 (15-190)||(48160946-48161121)
chr3 (19-172)||(24343606-24343760)
chr3 (72-188)||(8361951-8362067)
chr3 (5-190)||(19650740-19650924)
chr3 (80-172)||(34482824-34482916)
chr3 (72-188)||(41883129-41883245)
chr3 (5-190)||(37216893-37217077)
chr3 (72-190)||(11347309-11347427)
chr3 (72-188)||(9796935-9797051)
chr3 (99-190)||(42921184-42921275)
chr3 (5-107)||(30385525-30385625)
chr3 (9-60)||(26612916-26612967)
chr3 (5-60)||(34482728-34482783)
chr3 (5-60)||(42921295-42921350)
chr3 (5-188)||(41224276-41224459)
chr3 (5-50)||(8361879-8361924)
chr3 (75-190)||(46918943-46919053)
chr3 (154-188)||(8361876-8361910)
chr3 (154-188)||(33145906-33145940)
chr3 (154-188)||(36864870-36864904)
chr3 (154-188)||(40328025-40328059)
chr3 (5-50)||(9796869-9796914)
chr3 (2-50)||(46919074-46919122)
[»] chr6 (20 HSPs)
chr6 (5-188)||(33696739-33696922)
chr6 (5-190)||(2309263-2309447)
chr6 (5-188)||(17175861-17176043)
chr6 (15-188)||(33695176-33695349)
chr6 (5-190)||(17705309-17705489)
chr6 (5-188)||(28675191-28675373)
chr6 (5-190)||(6031580-6031765)
chr6 (5-188)||(18365414-18365595)
chr6 (5-188)||(18370678-18370859)
chr6 (72-188)||(9752151-9752267)
chr6 (72-188)||(25986973-25987089)
chr6 (5-190)||(8515567-8515749)
chr6 (72-190)||(23290990-23291108)
chr6 (5-190)||(6127316-6127502)
chr6 (5-188)||(11548429-11548610)
chr6 (5-188)||(32702248-32702430)
chr6 (72-127)||(29693542-29693597)
chr6 (5-120)||(18889484-18889597)
chr6 (5-60)||(29693615-29693670)
chr6 (154-188)||(28675342-28675376)
[»] chr8 (44 HSPs)
chr8 (5-188)||(20091641-20091823)
chr8 (5-188)||(34665425-34665606)
chr8 (5-188)||(17841690-17841872)
chr8 (5-188)||(25581079-25581261)
chr8 (5-190)||(6108073-6108257)
chr8 (5-188)||(26041953-26042138)
chr8 (5-188)||(3596881-3597063)
chr8 (5-188)||(40779969-40780151)
chr8 (5-190)||(1645804-1645989)
chr8 (5-190)||(37985896-37986079)
chr8 (5-188)||(32064788-32064971)
chr8 (5-188)||(8453877-8454058)
chr8 (72-190)||(35353082-35353200)
chr8 (72-190)||(41819684-41819802)
chr8 (72-188)||(24844765-24844880)
chr8 (5-188)||(42754882-42755064)
chr8 (72-188)||(39772708-39772823)
chr8 (5-188)||(15187603-15187785)
chr8 (72-188)||(24211459-24211575)
chr8 (72-188)||(31347688-31347804)
chr8 (5-190)||(14128905-14129084)
chr8 (13-190)||(32393899-32394074)
chr8 (76-185)||(27782027-27782136)
chr8 (72-188)||(7017771-7017887)
chr8 (72-188)||(27835359-27835475)
chr8 (72-188)||(3890523-3890638)
chr8 (72-188)||(7022021-7022137)
chr8 (72-188)||(30834961-30835069)
chr8 (111-188)||(15972822-15972899)
chr8 (72-184)||(10044390-10044502)
chr8 (5-133)||(30055615-30055741)
chr8 (5-143)||(37132521-37132653)
chr8 (72-118)||(38017047-38017093)
chr8 (5-60)||(24211212-24211267)
chr8 (5-60)||(41819608-41819663)
chr8 (5-50)||(1503683-1503728)
chr8 (152-188)||(30055708-30055744)
chr8 (72-136)||(30797137-30797200)
chr8 (149-188)||(3817913-3817952)
chr8 (5-60)||(10044518-10044573)
chr8 (5-48)||(31347616-31347659)
chr8 (154-188)||(41819605-41819639)
chr8 (154-190)||(32064940-32064976)
chr8 (154-186)||(37132520-37132552)
[»] chr7 (27 HSPs)
chr7 (5-188)||(4974575-4974757)
chr7 (5-188)||(42611854-42612036)
chr7 (5-190)||(3962020-3962203)
chr7 (5-190)||(24395013-24395196)
chr7 (5-188)||(48880767-48880949)
chr7 (5-190)||(42696124-42696308)
chr7 (15-190)||(29737180-29737359)
chr7 (5-188)||(45637755-45637936)
chr7 (72-188)||(20010004-20010119)
chr7 (5-188)||(15329316-15329499)
chr7 (72-190)||(34482876-34482993)
chr7 (5-190)||(18037019-18037202)
chr7 (5-190)||(30848610-30848794)
chr7 (1-190)||(37476916-37477104)
chr7 (72-190)||(25167756-25167874)
chr7 (75-188)||(35444601-35444714)
chr7 (75-188)||(15238425-15238538)
chr7 (72-188)||(15577756-15577872)
chr7 (87-188)||(40880713-40880814)
chr7 (72-190)||(36790372-36790490)
chr7 (5-60)||(35876414-35876469)
chr7 (5-60)||(34483008-34483063)
chr7 (5-50)||(15238564-15238609)
chr7 (5-50)||(15577687-15577732)
chr7 (5-42)||(25167696-25167733)
chr7 (15-60)||(35445567-35445612)
chr7 (154-190)||(15238578-15238614)
[»] chr4 (36 HSPs)
chr4 (5-188)||(46441887-46442069)
chr4 (5-190)||(7744952-7745136)
chr4 (5-188)||(10442627-10442811)
chr4 (5-188)||(49387727-49387910)
chr4 (5-188)||(9088913-9089095)
chr4 (5-188)||(36073393-36073574)
chr4 (5-188)||(21802160-21802344)
chr4 (5-188)||(44893053-44893235)
chr4 (5-188)||(44893469-44893651)
chr4 (5-188)||(47290109-47290291)
chr4 (5-188)||(53123074-53123256)
chr4 (5-190)||(23964304-23964489)
chr4 (5-188)||(4751489-4751672)
chr4 (5-161)||(30563279-30563434)
chr4 (5-188)||(31078659-31078841)
chr4 (72-190)||(50156484-50156602)
chr4 (5-188)||(2624880-2625062)
chr4 (75-188)||(17655473-17655586)
chr4 (5-188)||(24128282-24128464)
chr4 (72-188)||(36072990-36073106)
chr4 (5-188)||(22199304-22199484)
chr4 (2-188)||(37934779-37934963)
chr4 (5-188)||(33530524-33530710)
chr4 (73-190)||(36073650-36073767)
chr4 (73-190)||(42671710-42671827)
chr4 (72-188)||(24392710-24392826)
chr4 (72-190)||(37219666-37219784)
chr4 (72-190)||(44744476-44744593)
chr4 (116-187)||(11314184-11314255)
chr4 (5-60)||(37219801-37219856)
chr4 (5-50)||(24392854-24392899)
chr4 (5-57)||(11314092-11314144)
chr4 (80-159)||(9111337-9111416)
chr4 (5-60)||(36073121-36073176)
chr4 (154-188)||(21802157-21802191)
chr4 (155-188)||(11314089-11314122)
[»] chr5 (24 HSPs)
chr5 (5-190)||(4892243-4892427)
chr5 (5-190)||(25398279-25398463)
chr5 (5-190)||(11360971-11361155)
chr5 (5-190)||(33584169-33584353)
chr5 (5-190)||(2477677-2477861)
chr5 (5-185)||(12850847-12851027)
chr5 (5-188)||(14138711-14138892)
chr5 (72-188)||(31640846-31640962)
chr5 (5-188)||(3362821-3363004)
chr5 (5-188)||(4433848-4434029)
chr5 (5-190)||(37321633-37321817)
chr5 (5-188)||(6043352-6043533)
chr5 (5-188)||(8145418-8145598)
chr5 (5-188)||(22912897-22913076)
chr5 (5-188)||(38899566-38899748)
chr5 (5-185)||(3521847-3522025)
chr5 (104-188)||(12614671-12614755)
chr5 (75-188)||(17545594-17545707)
chr5 (72-136)||(27481917-27481981)
chr5 (5-60)||(12614578-12614633)
chr5 (72-140)||(36880229-36880297)
chr5 (18-50)||(13664739-13664771)
chr5 (5-50)||(17545522-17545567)
chr5 (154-190)||(17545517-17545553)
[»] chr1 (29 HSPs)
chr1 (5-188)||(44094741-44094922)
chr1 (5-190)||(25463717-25463901)
chr1 (5-188)||(19015447-19015629)
chr1 (5-188)||(40215031-40215213)
chr1 (5-190)||(41876282-41876466)
chr1 (72-190)||(27523161-27523279)
chr1 (5-188)||(6883530-6883712)
chr1 (5-190)||(51737546-51737730)
chr1 (9-188)||(36966552-36966730)
chr1 (5-188)||(37821674-37821856)
chr1 (72-188)||(40273745-40273861)
chr1 (5-188)||(9910131-9910315)
chr1 (76-190)||(3559658-3559772)
chr1 (5-188)||(32000106-32000289)
chr1 (5-158)||(20304970-20305123)
chr1 (5-172)||(25973472-25973632)
chr1 (72-188)||(44690935-44691051)
chr1 (72-190)||(18404483-18404601)
chr1 (74-188)||(33786543-33786657)
chr1 (114-188)||(16045746-16045820)
chr1 (16-190)||(10167441-10167613)
chr1 (115-172)||(34519817-34519874)
chr1 (5-50)||(33786471-33786516)
chr1 (5-50)||(40273888-40273933)
chr1 (72-136)||(52329364-52329427)
chr1 (72-136)||(51621025-51621085)
chr1 (5-60)||(52329445-52329500)
chr1 (5-50)||(44690862-44690907)
chr1 (5-60)||(18404618-18404673)
[»] scaffold0085 (1 HSPs)
scaffold0085 (5-188)||(47893-48074)
[»] scaffold0204 (1 HSPs)
scaffold0204 (5-190)||(4437-4621)
[»] scaffold0096 (1 HSPs)
scaffold0096 (16-188)||(41054-41224)
[»] scaffold0178 (1 HSPs)
scaffold0178 (5-188)||(11664-11846)
[»] scaffold0228 (3 HSPs)
scaffold0228 (5-188)||(25979-26161)
scaffold0228 (5-188)||(16027-16209)
scaffold0228 (72-188)||(8445-8561)
[»] scaffold0471 (1 HSPs)
scaffold0471 (5-188)||(12885-13067)
[»] scaffold0665 (1 HSPs)
scaffold0665 (72-190)||(3109-3222)
[»] scaffold0041 (1 HSPs)
scaffold0041 (87-188)||(85469-85570)


Alignment Details
Target: chr2 (Bit Score: 103; Significance: 3e-51; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 9293415 - 9293598
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    ||||||||  |||||||||||||||||||||||||||| ||||||| | |||||||           ||||||||||||||||||||||||||||||| |    
T  9293415 aatgacatgacacaataatcacccttagatttcagtctcatttattaatctttcataaaaaaaaaaatacataacacccaccaccccatgatttccggcc 9293514  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||| |||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||| || ||||||||||||    
T  9293515 aggctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattctt 9293598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 5 - 190
Target Start/End: Complemental strand, 9723631 - 9723446
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    ||||||||  || |||||||||| |||||||||||||||||||||| || ||||||           ||||||||||||||||||||||||||||||||     
T  9723631 aatgacatgacagaataatcacctttagatttcagtcttatttattcacttttcataaaaaaaaaaatacataacacccaccaccccatgatttccggtg 9723532  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    ||| |||||||||||| ||||||||||||||| ||| ||||| | |||||||| |||||||||||||| |||||||||||||||||    
T  9723531 aggctgagattttattagctaacattaatttcgggacaatttcttgataaaatttaagggtgattattctgtcatgtcattcttaa 9723446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 5 - 190
Target Start/End: Complemental strand, 35160984 - 35160798
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnn-tacataacacccaccaccccatgatttccggt 103  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||            |||||||||||||||||||||||||||||||     
T  35160984 aatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaaagatacataacacccaccaccccatgatttccggc 35160885  T
Q  104 caggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    |||| |||||||||||||| |||||||||||||||||  |||| | ||||||||||||||||||||||| || ||||||||||||||    
T  35160884 caggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattcttaa 35160798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 5 - 190
Target Start/End: Complemental strand, 10662113 - 10661928
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    ||||||||  ||||||||||||| |||||||||||||| ||||||| | |||||||           ||||||||||||||||||| ||||||||||| |    
T  10662113 aatgacatgacacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaagatacataacacccaccaccctatgatttccggcc 10662014  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    ||| |||||||||||||| |||||||||||||||||  |||| | ||||||||||||||||||||||| || ||||||||||||||    
T  10662013 aggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattcttaa 10661928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 72 - 188
Target Start/End: Complemental strand, 27847791 - 27847675
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||| ||||||| |||||||||||| |||||||||    
T  27847791 tacataacacccaccaccccatgatttctggtcaggctgagattttattgactaacattaatttcaggacaattttttgataaaatctaacggtgattat 27847692  T
Q  172 tttgtcatgtcattctt 188  Q
    | |||||||||||||||    
T  27847691 tctgtcatgtcattctt 27847675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 5 - 190
Target Start/End: Complemental strand, 33380432 - 33380248
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||           ||||||||||||||||||||||||||||||| |    
T  33380432 aatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcattaaaaaaaga-tacataacacccaccaccccatgatttccggcc 33380334  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    ||| |||||||||||||| |||||||||||||||||  |||| | |||||||||||||||||||||||  | ||||||||||||||    
T  33380333 aggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattcagccatgtcattcttaa 33380248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 23267902 - 23268084
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||           ||||||||||||||||||||||||||||||| |    
T  23267902 aatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaga-tacataacacccaccaccccatgatttccggcc 23268000  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||  |||||||||||||| |||||||||||||||||  |||| | ||||||||||||||||||||||| || ||||||||||||    
T  23268001 agactgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattctt 23268084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 72 - 188
Target Start/End: Original strand, 31174740 - 31174856
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||  |||| | ||||||||||||||||||||||    
T  31174740 tacataacacccaccaccccatgatttccggtcagactgagattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattat 31174839  T
Q  172 tttgtcatgtcattctt 188  Q
    | || ||||||||||||    
T  31174840 tctgccatgtcattctt 31174856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 72 - 188
Target Start/End: Original strand, 7475414 - 7475530
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||  |||| | ||||||||||||||||||||||    
T  7475414 tacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattat 7475513  T
Q  172 tttgtcatgtcattctt 188  Q
    | | |||||||||||||    
T  7475514 tctatcatgtcattctt 7475530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 5 - 190
Target Start/End: Complemental strand, 3989301 - 3989117
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    ||||||||  ||||||||| ||| |||||||||||||| ||||||| | |||||||           ||||||||||||||||||||||||||||||| |    
T  3989301 aatgacatgacacaataataacctttagatttcagtctcatttattaatctttcataaaaaaaaaa-tacataacacccaccaccccatgatttccggcc 3989203  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    ||  ||||||||||||||||||||||||||||| ||  |||| | ||||||||||||||||||||||| || ||||||||||||||    
T  3989202 agactgagattttattggctaacattaatttcaagactatttcttgataaaatctaagggtgattattctgccatgtcattcttaa 3989117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 14941204 - 14941388
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnn--tacataacacccaccaccccatgatttccgg 102  Q
    ||||||||  ||||||||||| |||||||||||| ||||||||||| |||||||||             |||||||||||||||||| ||||||||| ||    
T  14941204 aatgacatgacacaataatcatccttagatttcaatcttatttattaacctttcataaaataaaaaaaatacataacacccaccacctcatgatttctgg 14941303  T
Q  103 tcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
     |||| |||||||| ||||||||||||||||||||||| ||||| | ||||||||||||||||||||||| || ||||||||||||    
T  14941304 ccaggctgagattt-attggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattctt 14941388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 21936307 - 21936124
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||| | ||||||| | |||||||           ||||||||||||||||||||||||||||||| |    
T  21936307 aatgacatggcacaataatcacctttagatttcagtttcatttattaatctttcataaaaaaaaaa-tacataacacccaccaccccatgatttccggcc 21936209  T
Q  105 aggtt-gagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||| | |||||||||||||||||||||||||||| ||  |||| | ||||||||||||||||||||||| || ||| ||||||||    
T  21936208 aggctagagattttattggctaacattaatttcaagactatttcttgataaaatctaagggtgattattctgccatatcattctt 21936124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 13355073 - 13354889
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||  |||||||||||||| ||||||| | |||||||           ||||||||||||||||| ||||||||||||| |    
T  13355073 aatgacatggcacaataatcacttttagatttcagtctcatttattaatctttcataaaaaaaaaaatacataacacccaccactccatgatttccggcc 13354974  T
Q  105 aggtt-gagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||| | |||||||||||||||||||||||||||| ||  |||| | |||||||||||||||| |||||| || ||| ||||||||    
T  13354973 aggctagagattttattggctaacattaatttcaagactatttcttgataaaatctaagggtaattattctgccatatcattctt 13354889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 72 - 172
Target Start/End: Original strand, 16767378 - 16767478
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    ||||||||||||||||||| ||||||||||| |||  |||||||||||||||||||||||||||||||||||||| | |||||||| |||| ||||||||    
T  16767378 tacataacacccaccaccctatgatttccggccagactgagattttattggctaacattaatttcaggataatttcttgataaaatttaagagtgattat 16767477  T
Q  172 t 172  Q
    |    
T  16767478 t 16767478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 72 - 188
Target Start/End: Complemental strand, 43331071 - 43330955
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    ||||||||||||||||||||||||||||||| | |   || |||||||||||||||||||||||||| | ||||| | ||||||||||||||||||||||    
T  43331071 tacataacacccaccaccccatgatttccggcccgacagaaattttattggctaacattaatttcagtacaatttcttgataaaatctaagggtgattat 43330972  T
Q  172 tttgtcatgtcattctt 188  Q
    | || ||||||||||||    
T  43330971 tctgccatgtcattctt 43330955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 190
Target Start/End: Original strand, 21393594 - 21393712
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    ||||||||||||||||||||||||||||||| | |    |||||||||||| ||||||||||||||| | ||||| | ||||||||||||||||||||||    
T  21393594 tacataacacccaccaccccatgatttccggcccgacatagattttattggttaacattaatttcagtacaatttcttgataaaatctaagggtgattat 21393693  T
Q  172 tttgtcatgtcattcttaa 190  Q
    | |  ||||||||||||||    
T  21393694 tctaccatgtcattcttaa 21393712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 72 - 159
Target Start/End: Original strand, 40262642 - 40262729
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatct 159  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||| ||| ||||| | ||||||||||    
T  40262642 tacataacacccaccaccccataatttccggtcagggtgagattttattggctaatattaatttcgggacaatttcttgataaaatct 40262729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 74 - 188
Target Start/End: Complemental strand, 22591639 - 22591525
Alignment:
Q  74 cataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattt 173  Q
    ||||| ||||||||||||||||||||| |  ||| |||||||||||||||||||||||||||||||| ||||| |  ||||||| |||||| |||||||     
T  22591639 cataatacccaccaccccatgatttcctgctaggctgagattttattggctaacattaatttcaggacaatttcttaataaaatttaagggggattattc 22591540  T
Q  174 tgtcatgtcattctt 188  Q
    || ||| ||||||||    
T  22591539 tgccatatcattctt 22591525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 34320997 - 34321042
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatt 50  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||    
T  34320997 aatgacatggcacaataatcacccttagatttcagtctcatttatt 34321042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 188
Target Start/End: Complemental strand, 37335829 - 37335756
Alignment:
Q  115 tttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||||||||||||||||||| |||| | ||||||| |||| |||||||  ||||||||| || ||||||||||||    
T  37335829 tttattggctaacattaatatcagaacaattttttgatacaatctaaaagtgattattctgccatgtcattctt 37335756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 16767302 - 16767357
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcat 60  Q
    ||||||||  |||||||||||| ||||||||||||||| ||||||| |||||||||    
T  16767302 aatgacatgacacaataatcactcttagatttcagtctcatttattaacctttcat 16767357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 22592937 - 22592880
Alignment:
Q  5 aatgacattgcacaataatcacccttaga--tttcagtcttatttatttacctttcat 60  Q
    ||||||||  |||||||||||||||||||  ||||||||||||||||| |||||||||    
T  22592937 aatgacatgacacaataatcacccttagatttttcagtcttatttattaacctttcat 22592880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 37335873 - 37335824
Alignment:
Q  1 taataatgacattgcacaataatcacccttagatttcagtcttatttatt 50  Q
    ||||||||||||  |||| ||||||||||||||||||||||| |||||||    
T  37335873 taataatgacatgacacagtaatcacccttagatttcagtctcatttatt 37335824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 153 - 188
Target Start/End: Original strand, 22592905 - 22592940
Alignment:
Q  153 aaaatctaagggtgattattttgtcatgtcattctt 188  Q
    |||||||||||||||||||| |||||||||||||||    
T  22592905 aaaatctaagggtgattattgtgtcatgtcattctt 22592940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 188
Target Start/End: Complemental strand, 9293446 - 9293412
Alignment:
Q  154 aaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||||||||||||||||||| |||||||||||||||    
T  9293446 aaatctaagggtgattattgtgtcatgtcattctt 9293412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 21393525 - 21393570
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatt 50  Q
    ||||||||  ||||||||||||||||| |||||||||| |||||||    
T  21393525 aatgacatgacacaataatcacccttaaatttcagtctcatttatt 21393570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 43331137 - 43331092
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatt 50  Q
    |||||||| | |||||||||||| |||||||||||||| |||||||    
T  43331137 aatgacatggtacaataatcacctttagatttcagtctcatttatt 43331092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 9723600 - 9723636
Alignment:
Q  154 aaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    |||||||| |||||||||| |||||||||||||||||    
T  9723600 aaatctaaaggtgattattctgtcatgtcattcttaa 9723636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 101; Significance: 5e-50; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 201 - 324
Target Start/End: Complemental strand, 40327890 - 40327766
Alignment:
Q  201 atatatagcattgat-gtgttgtaaattgctaatgaagtgaattattaatgaatgttagtttaattaataaggagttgacacatatctaatataatttga 299  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  40327890 atatatagcattgatcgtgttgtaaattggtaatgaagtgaattattaatgaatgttagtttaattaataaggagttgacacatatctaatagaatttga 40327791  T
Q  300 gttcaactctgattaacggtatatt 324  Q
    |||||||||  ||||||||||||||    
T  40327790 gttcaactccaattaacggtatatt 40327766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 5 - 190
Target Start/End: Complemental strand, 33145937 - 33145753
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    ||||||||  |||||||||||||||||||||||||||||||||||| |||||||||           |||||| ||||||||||| ||| ||||||||||    
T  33145937 aatgacatgacacaataatcacccttagatttcagtcttatttattaacctttcataaaaaaaaaa-tacataccacccaccacctcataatttccggtc 33145839  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    ||| |||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||| || ||||||||||||||    
T  33145838 aggctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattcttaa 33145753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 3137254 - 3137436
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||           ||||||||||||| ||||||||||||||||| |    
T  3137254 aatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcatacaaaaaaga-tacataacacccatcaccccatgatttccggcc 3137352  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||| |||||||||||||| |||||||||||||||||  |||| | |||||||||||||||||||||||||| ||||||||||||    
T  3137353 aggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattttgccatgtcattctt 3137436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 6042102 - 6041927
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| |  ||||||            | |||||| |||||||||||||||||||||||    
T  6042102 aatgacatggcacaataatcacctttagatttcagtctcatttattaatttttcataaaa--------aaataacaaccaccaccccatgatttccggtc 6042011  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||| ||||||||||||||||||||||||||||||||  |||| | ||||||||||||||||||||||| |||||||||||||||    
T  6042010 aggctgagattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgtcatgtcattctt 6041927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 33114019 - 33113836
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||| ||| ||||||| | |||||||           ||||||||||||||||||||||||||||||| |    
T  33114019 aatgacatggcacaataatcacctttagatttcaatctcatttattaatctttcataaaaaaaaaaatacataacacccaccaccccatgatttccggcc 33113920  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||  ||| ||||||||||||||||||||||||||||  |||| | ||||||||||||||||||||||| || ||||| ||||||    
T  33113919 agactgaaattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtaattctt 33113836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 5 - 190
Target Start/End: Complemental strand, 2754944 - 2754758
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnn-tacataacacccaccaccccatgatttccggt 103  Q
    |||||||| |||||||||||||| ||| |||||||||| ||||||| | |||||||            |||||||||||||| |||||||||||||||||    
T  2754944 aatgacatggcacaataatcacctttaaatttcagtctcatttattaatctttcataaaaaaaaaaaatacataacacccactaccccatgatttccggt 2754845  T
Q  104 caggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    |||| |||||||||||||| |||||||||||||||||  |||| | |||||||||||| |||||||||| || ||||||||||||||    
T  2754844 caggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaaaggtgattattctgccatgtcattcttaa 2754758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 5 - 190
Target Start/End: Complemental strand, 3089644 - 3089458
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnn-tacataacacccaccaccccatgatttccggt 103  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||            |||||| ||||||||||||||||||||||||     
T  3089644 aatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaataatacatagcacccaccaccccatgatttccggc 3089545  T
Q  104 caggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    || | ||||||||||||||||||||||||||||| ||  |||| | ||||||||||||||||||||||| || ||||||||||||||    
T  3089544 caagctgagattttattggctaacattaatttcaagaatatttcttgataaaatctaagggtgattattctgccatgtcattcttaa 3089458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 5 - 190
Target Start/End: Complemental strand, 37522278 - 37522094
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| ||| |||||||||| |||||||||||||| ||||||| | |||||||           |||||||||||||||||||||| |||||||| |    
T  37522278 aatgacatggcataataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaga-tacataacacccaccaccccataatttccggcc 37522180  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    |||||||||||||||||| |||||||||||||| ||  |||| |  ||||||||| |||||||||||| |||||||||||||||||    
T  37522179 aggttgagattttattggttaacattaatttcatgactatttctttataaaatcttagggtgattattctgtcatgtcattcttaa 37522094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 72 - 190
Target Start/End: Complemental strand, 42297513 - 42297394
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |  |||| | ||||||||||||||||||||||    
T  42297513 tacataacatccaccaccccatgatttccggtcaggctgagattttattggctaacattaatttcagaactatttcttgataaaatctaagggtgattat 42297414  T
Q  172 t-ttgtcatgtcattcttaa 190  Q
    | | ||||||||||||||||    
T  42297413 tctagtcatgtcattcttaa 42297394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 47738336 - 47738148
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnn-----tacataacacccaccaccccatgatttc 99  Q
    |||||||| |||||||||||| |||||||||||||||| ||||||| |||||||||                ||||||||||||||||||||||||||||    
T  47738336 aatgacatggcacaataatcatccttagatttcagtctcatttattaacctttcataaaaaataaaaaaaaatacataacacccaccaccccatgatttc 47738237  T
Q  100 cggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
     ||||||| |||||||||||||||||||||||||||||||| |||||||  ||||||||||| ||| |||||| || ||| ||||||||    
T  47738236 tggtcaggctgagattttattggctaacattaatttcaggacaatttttttataaaatctaaaggtaattattctgccatatcattctt 47738148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 5 - 190
Target Start/End: Original strand, 8320422 - 8320608
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccacccc-atgatttccggt 103  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||           |||||||||||||| ||||| |||||||| ||     
T  8320422 aatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaaaatacataacacccactacccccatgatttctggc 8320521  T
Q  104 caggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    |||| ||||||||||||||||||||||||||||| ||  |||| | |||||||| ||||||||||||||||| ||| ||||||||||    
T  8320522 caggctgagattttattggctaacattaatttcaagactatttcttgataaaatttaagggtgattattttgccatatcattcttaa 8320608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 5 - 190
Target Start/End: Original strand, 22426185 - 22426368
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||  |||||||||||||| ||||||| | |||||||           ||||||||||||||||||||||||||||||| |    
T  22426185 aatgacatggcacaataatcacatttagatttcagtctcatttattaatctttcataaaaaaaaa--tacataacacccaccaccccatgatttccggcc 22426282  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    ||  ||| ||||||||||||||||||||||||| ||  |||| | ||||||||||||||||||||||| || ||||||||| ||||    
T  22426283 agactgaaattttattggctaacattaatttcaagactatttcttgataaaatctaagggtgattattctgccatgtcatttttaa 22426368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 5 - 185
Target Start/End: Complemental strand, 42298087 - 42297909
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    ||||||||  |||||||| ||||||||||||||||||| ||||||| |||||||||           ||||||||| | ||||||||||||||||||| |    
T  42298087 aatgacatgacacaataaccacccttagatttcagtctcatttattaacctttcataaaaaaaa---tacataacatctaccaccccatgatttccggcc 42297991  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttg-tcatgtcatt 185  Q
    ||  ||||||||||||||||||||||||||||||||  |||| | ||||||||||||||||||||||| || ||||||||||    
T  42297990 agactgagattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgatcatgtcatt 42297909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 5 - 159
Target Start/End: Complemental strand, 40328056 - 40327897
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnnta-----cataacacccaccaccccatgatttc 99  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||           ||     ||||||||||||||||| ||||||||    
T  40328056 aatgacatgacacaataatcacccttagatttcagtcttatttatttacctttgataaaaataaaaataaaatacataacacccaccaccctatgatttc 40327957  T
Q  100 cggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatct 159  Q
    ||| ||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||    
T  40327956 cggccaggttgagattttattggctaacattaatttcaggacaatttcttgataaaatct 40327897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 72 - 185
Target Start/End: Complemental strand, 30385170 - 30385057
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||  |||| | |||||||| |||||||||||||    
T  30385170 tacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatataagggtgattat 30385071  T
Q  172 tttgtcatgtcatt 185  Q
    | || |||||||||    
T  30385070 tctgccatgtcatt 30385057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 5 - 190
Target Start/End: Complemental strand, 33839760 - 33839572
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnn---tacataacacccaccaccccatgatttccg 101  Q
    ||||||||  ||||||||||||||||| |||||||||| ||||||| |||||||||              ||||||||||| ||||||||||||||| ||    
T  33839760 aatgacatgacacaataatcacccttaaatttcagtctcatttattaacctttcataaaaaaagaaaaaatacataacacctaccaccccatgatttacg 33839661  T
Q  102 gtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    | ||| ||||||||||||||||||||||||||||||  | ||||| | |||||||||||| |||||||||| |||||||| ||||||||    
T  33839660 gccagattgagattttattggctaacattaatttcaaaacaatttcttgataaaatctaatggtgattattctgtcatgttattcttaa 33839572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 5 - 190
Target Start/End: Original strand, 3574366 - 3574551
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    ||||||||  |||||||||||||  ||||||||||||| ||||||| | |||||||           ||||||||||||||||||||||||||||||| |    
T  3574366 aatgacatgacacaataatcacctctagatttcagtctcatttattaatctttcataaaaaaaaaa-tacataacacccaccaccccatgatttccggcc 3574464  T
Q  105 aggttgagattttattggctaacattaa-tttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    | | |||||||||||||||||||||||| ||||| ||  |||| | ||||||||||||||||||||||| || ||||||||||||||    
T  3574465 aagctgagattttattggctaacattaattttcaagactatttcttgataaaatctaagggtgattattctgccatgtcattcttaa 3574551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 72 - 190
Target Start/End: Complemental strand, 3456223 - 3456105
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    ||||||||||||||||||||||||||||||| |||  |||||||||||||| ||||||||||| |||||  |||| | ||||||||||||||||||||||    
T  3456223 tacataacacccaccaccccatgatttccggccagactgagattttattggttaacattaattccaggactatttcttgataaaatctaagggtgattat 3456124  T
Q  172 tttgtcatgtcattcttaa 190  Q
    | || ||| ||||||||||    
T  3456123 tctgccatatcattcttaa 3456105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 5 - 190
Target Start/End: Original strand, 36864873 - 36865051
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    ||||||||  |||||||||||||||||||||||||||| ||||||| || ||||||           |||||||||||||||| |||||||||||||| |    
T  36864873 aatgacatgacacaataatcacccttagatttcagtctcatttattaacatttcatataaaaaa---tacataacacccaccatcccatgatttccggcc 36864969  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
        ||||||| ||||||||||||||||||||||||  |||||| ||||||| ||||||||||||||| |  ||||||||||||||    
T  36864970 ----tgagattctattggctaacattaatttcaggactattttttgataaaacctaagggtgattattctaccatgtcattcttaa 36865051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 15 - 190
Target Start/End: Complemental strand, 48161121 - 48160946
Alignment:
Q  15 cacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtcaggttgagat 114  Q
    ||||||||||||| |||||||||||||| ||||||| |  ||||||           ||||||||||||||||||||||| |||||||  ||| ||||||    
T  48161121 cacaataatcacctttagatttcagtctcatttattaatttttcataaaaaaaaaaatacataacacccaccaccccatggtttccggctaggctgagat 48161022  T
Q  115 tttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    |||||||||||| |||||||||| ||  |||| | ||||||||||||||||||||||| || ||| ||||||||||    
T  48161021 tttattggctaatattaatttcaagactatttcttgataaaatctaagggtgattattctgccatatcattcttaa 48160946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 172
Target Start/End: Complemental strand, 24343760 - 24343606
Alignment:
Q  19 ataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnn-tacataacacccaccaccccatgatttccggtcaggttgagatttt 117  Q
    |||||||||||||||||||||||||||||||| ||||||||             ||||||||||||||||||| ||||||| |||||||| |||||||||    
T  24343760 ataatcacccttagatttcagtcttatttattaacctttcaaaaaaaaaaaaaatacataacacccaccacccgatgattttcggtcaggatgagatttt 24343661  T
Q  118 attggctaacattaatttcaggataatttttcgataaaatctaagggtgattatt 172  Q
    ||||||||||||||||||| | | ||||| | ||||||||||||| |||||||||    
T  24343660 attggctaacattaatttcggaacaatttcttgataaaatctaagagtgattatt 24343606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 72 - 188
Target Start/End: Original strand, 8361951 - 8362067
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    ||||| ||||||||||||||||||||||||| | |   ||||||||||||||||||||||||||||| | ||||| | ||||||||||||||||||||||    
T  8361951 tacatgacacccaccaccccatgatttccggcccgacagagattttattggctaacattaatttcagtacaatttcttgataaaatctaagggtgattat 8362050  T
Q  172 tttgtcatgtcattctt 188  Q
    | || ||||||||||||    
T  8362051 tctgccatgtcattctt 8362067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 190
Target Start/End: Original strand, 19650740 - 19650924
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    ||||||||  ||||||||||||| |||||||||||||| ||||||| | |||||||           ||||||||||||||||||||||||||||||| |    
T  19650740 aatgacatgacacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaa--tacataacacccaccaccccatgatttccggcc 19650837  T
Q  105 aggttgagattttattggctaacattaattt-caggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    | | ||||||||||| ||||||||||||||| || ||   ||| | |||||||||||| |||||||||| || ||||||||||||||    
T  19650838 aagctgagattttatcggctaacattaattttcaagactgtttcttgataaaatctaatggtgattattctgccatgtcattcttaa 19650924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 80 - 172
Target Start/End: Original strand, 34482824 - 34482916
Alignment:
Q  80 acccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattatt 172  Q
    ||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||  |||| | |||||||||||||||||||||||    
T  34482824 acccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattatt 34482916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 72 - 188
Target Start/End: Original strand, 41883129 - 41883245
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    ||||||||||||||||||||||||||||  | |||  ||||||||||||| |||||||||||||| ||| ||||| | |||||||| |||||||||||||    
T  41883129 tacataacacccaccaccccatgatttctagccagtctgagattttattgactaacattaatttcgggacaatttcttgataaaatttaagggtgattat 41883228  T
Q  172 tttgtcatgtcattctt 188  Q
    | || ||||||||||||    
T  41883229 tctgccatgtcattctt 41883245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 5 - 190
Target Start/End: Original strand, 37216893 - 37217077
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| | |||||||||||| |||||||||||||| ||||||| | |||||||           ||||||||||||||||||| ||||||| | |      
T  37216893 aatgacatggtacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaaa-tacataacacccaccaccctatgattttcagca 37216991  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    ||| |||||||||||||| |||||||||||||| ||  |||| | |||||||| |||||||||||||| || ||||||||||||||    
T  37216992 aggctgagattttattggttaacattaatttcatgactatttcttgataaaatttaagggtgattattctgccatgtcattcttaa 37217077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 190
Target Start/End: Complemental strand, 11347427 - 11347309
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    ||||||||||||||||||||||||||||  | ||   ||||||||||||||||||||||||||||||||  ||||   |||||||||||||||| |||||    
T  11347427 tacataacacccaccaccccatgatttctagccactctgagattttattggctaacattaatttcaggactatttcctgataaaatctaagggttattat 11347328  T
Q  172 tttgtcatgtcattcttaa 190  Q
    | || ||||||||||||||    
T  11347327 tctgccatgtcattcttaa 11347309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 72 - 188
Target Start/End: Original strand, 9796935 - 9797051
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    ||||||| ||||||||||||||||||| ||| | |   |||||||||||||||||||||||||| || | ||||| | |||||||||||| |||||||||    
T  9796935 tacataagacccaccaccccatgattttcggcccgacagagattttattggctaacattaatttaagtacaatttcttgataaaatctaatggtgattat 9797034  T
Q  172 tttgtcatgtcattctt 188  Q
    | || ||||||||||||    
T  9797035 tctgccatgtcattctt 9797051  T

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Target: chr3; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 190
Target Start/End: Complemental strand, 42921275 - 42921184
Alignment:
Q  99 ccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    ||||| ||| |||||||||||||||||||||||| ||||||| ||||| | |||||||||||| ||  || |||  ||||||||||||||||    
T  42921275 ccggtaaggctgagattttattggctaacattaaattcaggacaatttcttgataaaatctaaaggcaatcattcggtcatgtcattcttaa 42921184  T

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Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 107
Target Start/End: Complemental strand, 30385625 - 30385525
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||           ||||||||||||||||||||||||||||||| |    
T  30385625 aatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat--aaaaataaatacataacacccaccaccccatgatttccggcc 30385528  T
Q  105 agg 107  Q
    |||    
T  30385527 agg 30385525  T

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Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 26612967 - 26612916
Alignment:
Q  9 acattgcacaataatcacccttagatttcagtcttatttatttacctttcat 60  Q
    |||| ||||||||||||||||||||||||||||| ||||||| |||||||||    
T  26612967 acatggcacaataatcacccttagatttcagtctcatttattaacctttcat 26612916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 34482728 - 34482783
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcat 60  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||    
T  34482728 aatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 34482783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 42921350 - 42921295
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcat 60  Q
    |||||||| |||||| ||||||||||| |||||||||| ||||||| |||||||||    
T  42921350 aatgacatggcacaacaatcacccttaaatttcagtctcatttattaacctttcat 42921295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 41224459 - 41224276
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcat--nnnnnnnnnnntacataacacccaccaccccatgatttccgg 102  Q
    |||||||| |||||||||||||||||| |||||| ||| ||||||||  |||||||             ||||||||||||||||||||||||||||||     
T  41224459 aatgacatggcacaataatcacccttaaatttcaatctcatttattt--ctttcataaaaaaaaaaaaatacataacacccaccaccccatgatttccga 41224362  T
Q  103 tcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
     |     ||||||||||| ||||||||||||||||  | ||||| |  |||||||  ||||||||| ||| |  ||||||||||||    
T  41224361 cccaacagagattttattagctaacattaatttcaatacaatttcttaataaaattcaagggtgataattctaccatgtcattctt 41224276  T

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Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 8361879 - 8361924
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatt 50  Q
    ||||||||  |||||||||||||||||||||||||||| |||||||    
T  8361879 aatgacatgacacaataatcacccttagatttcagtctcatttatt 8361924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 190
Target Start/End: Complemental strand, 46919053 - 46918943
Alignment:
Q  75 ataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattatttt 174  Q
    |||||| ||||||||||||||||||| | ||     | |||||||| |||||||||||||||  || ||||| | |||||||||||| ||| |||||| |    
T  46919053 ataacatccaccaccccatgatttccagcca-----acattttatttgctaacattaatttcgagacaatttcttgataaaatctaaaggtaattattct 46918959  T
Q  175 gtcatgtcattcttaa 190  Q
     |||| ||||| ||||    
T  46918958 atcatatcatttttaa 46918943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 188
Target Start/End: Complemental strand, 8361910 - 8361876
Alignment:
Q  154 aaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||||||||||||||||||| |||||||||||||||    
T  8361910 aaatctaagggtgattattgtgtcatgtcattctt 8361876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 188
Target Start/End: Original strand, 33145906 - 33145940
Alignment:
Q  154 aaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||||||||||||||||||| |||||||||||||||    
T  33145906 aaatctaagggtgattattgtgtcatgtcattctt 33145940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 188
Target Start/End: Complemental strand, 36864904 - 36864870
Alignment:
Q  154 aaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||||||||||||||||||| |||||||||||||||    
T  36864904 aaatctaagggtgattattgtgtcatgtcattctt 36864870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 188
Target Start/End: Original strand, 40328025 - 40328059
Alignment:
Q  154 aaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||||||||||||||||||| |||||||||||||||    
T  40328025 aaatctaagggtgattattgtgtcatgtcattctt 40328059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 9796869 - 9796914
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatt 50  Q
    ||||||||  |||||||||||| ||||||||||||||| |||||||    
T  9796869 aatgacatgtcacaataatcactcttagatttcagtctcatttatt 9796914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 46919122 - 46919074
Alignment:
Q  2 aataatgacattgcacaataatcacccttagatttcagtcttatttatt 50  Q
    ||||||||||| ||| ||||||||||  |||||||| ||||||||||||    
T  46919122 aataatgacatggcagaataatcacctctagatttcggtcttatttatt 46919074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 99; Significance: 8e-49; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 33696922 - 33696739
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||           ||||||||||||||||||||||||||||||| |    
T  33696922 aatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaaattacataacacccaccaccccatgatttccggcc 33696823  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||| ||||||||||||||||||||||||||||||||  |||| | ||||||||||||||||||||||| || ||||||||||||    
T  33696822 aggctgagattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattctt 33696739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 5 - 190
Target Start/End: Original strand, 2309263 - 2309447
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||           |||||||||||||| |||||||||||||||| |    
T  2309263 aatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcataaaaaaaaaa-tacataacacccacaaccccatgatttccggcc 2309361  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    | | |||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||| || |||| |||||||||    
T  2309362 aagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgccattcttaa 2309447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 17175861 - 17176043
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| | |||||||||||| |||||||||||||| ||||||| | |||||||           ||||||||||||||||||||||||||||||| |    
T  17175861 aatgacatggtacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaaa-tacataacacccaccaccccatgatttccggcc 17175959  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||| ||||||||||||||||||||||||||||| ||| |||| | ||||||||||||||||||||||| |||||||||||||||    
T  17175960 aggctgagattttattggctaacattaatttcatgattatttcttgataaaatctaagggtgattattctgtcatgtcattctt 17176043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 33695176 - 33695349
Alignment:
Q  15 cacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtcaggttgagat 114  Q
    ||||||||||||| |||||||||||||| ||||||| | |||||||           ||||||||||||||||||||||||||||||| |||| ||||||    
T  33695176 cacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaaattacataacacccaccaccccatgatttccggccaggctgagat 33695275  T
Q  115 tttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||||||||||||||||||||||||||  |||| | ||||||||||||||||||||||| || ||||||||||||    
T  33695276 tttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattctt 33695349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 5 - 190
Target Start/End: Original strand, 17705309 - 17705489
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    ||||||||  ||||||||||||| |||||||||||||| ||||||| |||||||||           |||||||||||||||| |||||||||||||| |    
T  17705309 aatgacatgacacaataatcacc-ttagatttcagtctcatttattaacctttcataaaaaat----tacataacacccaccatcccatgatttccggcc 17705403  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    ||  |||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||| |||||||||||||||||    
T  17705404 agactgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgtcatgtcattcttaa 17705489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 28675373 - 28675191
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    ||||||||  |||||||||||||||||||||||||||| ||||||| |||||||||           |||||||| |||||||||||||||||||||| |    
T  28675373 aatgacatgacacaataatcacccttagatttcagtctcatttattaacctttcataaataaaaaa-tacataacccccaccaccccatgatttccggcc 28675275  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||| |||||||||||| ||||||||||||||||||| ||||| | |||||||||||||||||||||||  | ||||||||||||    
T  28675274 aggctgagattttattagctaacattaatttcaggacaatttcttgataaaatctaagggtgattattccgacatgtcattctt 28675191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 5 - 190
Target Start/End: Original strand, 6031580 - 6031765
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||| ||           ||||||||||||||||||||||||||||||| |    
T  6031580 aatgacatggcacaataatcacctttagatttcagtctcatttattaatcttttataaaaaaaaaaatacataacacccaccaccccatgatttccggcc 6031679  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    ||| || ||||||||||| |||||||||||||| ||  |||| | |||||||| |||||||||||||| |||||||||||||||||    
T  6031680 aggctgggattttattggttaacattaatttcaagactatttcttgataaaatttaagggtgattattctgtcatgtcattcttaa 6031765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 18365414 - 18365595
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||           |||||||||||||| |||||||||||||||| |    
T  18365414 aatgacatagcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaa--tacataacacccactaccccatgatttccggcc 18365511  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||| ||||||||||||||||||||||||||||| ||  |||| | |||||||| |||||||||||||| || ||||||||||||    
T  18365512 aggatgagattttattggctaacattaatttcaagactatttcttgataaaatttaagggtgattattctgccatgtcattctt 18365595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 18370678 - 18370859
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||           |||||||||||||| |||||||||||||||| |    
T  18370678 aatgacatagcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaa--tacataacacccactaccccatgatttccggcc 18370775  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||| ||||||||||||||||||||||||||||| ||  |||| | |||||||| |||||||||||||| || ||||||||||||    
T  18370776 aggatgagattttattggctaacattaatttcaagactatttcttgataaaatttaagggtgattattctgccatgtcattctt 18370859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 72 - 188
Target Start/End: Original strand, 9752151 - 9752267
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    ||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||||||||    
T  9752151 tacataacacccatcaccccatgatttccggccaggctgagattttattggctaacattaatttcaggacaatttcttaataaaatctaagggtgattat 9752250  T
Q  172 tttgtcatgtcattctt 188  Q
    | || ||| ||||||||    
T  9752251 tctgccatatcattctt 9752267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 72 - 188
Target Start/End: Complemental strand, 25987089 - 25986973
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    ||||||||||||||||||||||||||||||| |||  |||||||||||||| |||||||||||||||||  |||| | |||||||| |||| ||||||||    
T  25987089 tacataacacccaccaccccatgatttccggccagactgagattttattggttaacattaatttcaggactatttcttgataaaatttaagagtgattat 25986990  T
Q  172 tttgtcatgtcattctt 188  Q
    |||| ||||||||||||    
T  25986989 tttgccatgtcattctt 25986973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 5 - 190
Target Start/End: Original strand, 8515567 - 8515749
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| | | ||||||||| ||||||||||||||||||||||| || ||||||           ||||||||| |||||||||||||||||||| ||    
T  8515567 aatgacatggtagaataatcactcttagatttcagtcttatttattaacatttcataaaaaaaaa--tacataacatccaccaccccatgatttccgatc 8515664  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    ||| |||||||||||||||||||||||||||| ||| ||||| | ||||||||| ||  ||||||||| || ||||||||||||||    
T  8515665 aggctgagattttattggctaacattaatttcgggacaatttcttgataaaatc-aaatgtgattattctgccatgtcattcttaa 8515749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 72 - 190
Target Start/End: Original strand, 23290990 - 23291108
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    ||||||||||||| |||||||||||||| || |||| |||||||||||||| ||||||||||||||| |  |||| | ||||||||||||||||||||||    
T  23290990 tacataacacccatcaccccatgatttctggccaggctgagattttattggttaacattaatttcagaactatttcttgataaaatctaagggtgattat 23291089  T
Q  172 tttgtcatgtcattcttaa 190  Q
    | || ||||||||||||||    
T  23291090 tctgccatgtcattcttaa 23291108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 5 - 190
Target Start/End: Complemental strand, 6127502 - 6127316
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||  |||||||||||||| ||||||| | |||||||           |||||||||||||||||||||||||||| || |    
T  6127502 aatgacatggcacaataatcacttttagatttcagtctcatttattaatctttcatataaaaaaaaatacataacacccaccaccccatgatttctggcc 6127403  T
Q  105 aggttgagattttattggctaacattaa-tttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    |   ||| |||||||||||||||||||| ||||| ||  |||| | ||||||||||||||||||||||| || ||||||||||||||    
T  6127402 aaactgatattttattggctaacattaattttcaagactatttcttgataaaatctaagggtgattattctgccatgtcattcttaa 6127316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 11548429 - 11548610
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnn-tacataacacccaccaccccatgatttccggt 103  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||  ||||||||            |||||||||||||| ||||||||||||||||     
T  11548429 aatgacatggcacaataatcacccttagatttcagtctcatttatt--cctttcataaaaaagaaaaatacataacacccac-accccatgatttccggc 11548525  T
Q  104 caggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    | |   |||||||||||||||||||||||| |||| | ||||| | ||||||||||||||||||||||| || ||||||||||||    
T  11548526 ccgacagagattttattggctaacattaatatcagtacaatttcttgataaaatctaagggtgattattctgccatgtcattctt 11548610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 32702430 - 32702248
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    ||||||||  ||||||||| ||| |||||||||||||| ||||||| | |||||||           ||||||| |||||||||||||||||||||||      
T  32702430 aatgacatgacacaataattacctttagatttcagtctcatttattaatctttcataaaaaaaaga-tacataagacccaccaccccatgatttccggct 32702332  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||  | |||||||||||| ||| |||||||||||||  |||| | ||||||||||||||||||||||| || ||| ||||||||    
T  32702331 agactcagattttattggttaatattaatttcaggactatttcttgataaaatctaagggtgattattctgccatatcattctt 32702248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 29693597 - 29693542
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaac 127  Q
    ||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||    
T  29693597 tacataacatccaccaccccatgatttccggccaggctgagattttattggctaac 29693542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 18889484 - 18889597
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||           ||||||| |||||||||||||||||||||||      
T  18889484 aatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat--aaaaaaaaatacataaaacccaccaccccatgatttccggca 18889581  T
Q  105 aggttgagattttatt 120  Q
    ||| ||||||||||||    
T  18889582 aggctgagattttatt 18889597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 29693670 - 29693615
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcat 60  Q
    |||||||| ||| |||||| ||||||||||||||||||||||||||  ||||||||    
T  29693670 aatgacatggcagaataatgacccttagatttcagtcttatttattatcctttcat 29693615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 188
Target Start/End: Original strand, 28675342 - 28675376
Alignment:
Q  154 aaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||||||||||||||||||| |||||||||||||||    
T  28675342 aaatctaagggtgattattgtgtcatgtcattctt 28675376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 98; Significance: 3e-48; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 20091641 - 20091823
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||           |||||||||||||||||||||||||||||||      
T  20091641 aatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcataaaaaaaaaa-tacataacacccaccaccccatgatttccggct 20091739  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||| ||||||||||||||||||||||||||||||||  |||| | ||||||||||||||||||||||| || ||||||||||||    
T  20091740 aggctgagattttattggctaacattaatttcaggacgatttcttgataaaatctaagggtgattattctgccatgtcattctt 20091823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 34665606 - 34665425
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||           ||||||||||||||||| ||||||||| ||| |    
T  34665606 aatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcataaaaaaaaa--tacataacacccaccactccatgattttcggcc 34665509  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    | | |||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||| || ||||||||||||    
T  34665508 aagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattctt 34665425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 17841690 - 17841872
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||           ||||||||||||||||||||||||||||||| |    
T  17841690 aatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaga-tacataacacccaccaccccatgatttccggcc 17841788  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||| |||||||||||||| |||||||||||||||||  |||| | ||||||||||||||||||||||| || ||||||||||||    
T  17841789 aggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattctt 17841872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 25581079 - 25581261
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    ||||||||  ||||||||||||| |||||||||||||| ||||||| | |||||||           |||||||||||||||||||||||||||||||||    
T  25581079 aatgacataacacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaga-tacataacacccaccaccccatgatttccggtc 25581177  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||| |||||||||||||| |||||||||||||||||  |||| | |||||||||||| ||||||||||||| ||||||||||||    
T  25581178 aggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaaaggtgattattttgccatgtcattctt 25581261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 5 - 190
Target Start/End: Original strand, 6108073 - 6108257
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    ||||||||  ||||||||||||| |||||||||||||| ||||||| | |||||||           ||||||||||||||||||||||||||||||| |    
T  6108073 aatgacatgacacaataatcacctttagatttcagtctcatttattaatctttcataaaaagaaga-tacataacacccaccaccccatgatttccggcc 6108171  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    ||| |||||||||||||| |||||||||||||||||  |||| | ||||||||||||||||||||||| || ||||||||||||||    
T  6108172 aggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattcttaa 6108257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 26041953 - 26042138
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||           |||||||||||||||||||||||||||||||||    
T  26041953 aatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaga-tacataacacccaccaccccatgatttccggtc 26042051  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgat---aaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||| |||||||||||||| |||||||||||||||||  |||| | |||   |||||||||||||||||||| |||||||||||||||    
T  26042052 aggctgagattttattggttaacattaatttcaggactatttcttgataaaaaaatctaagggtgattattctgtcatgtcattctt 26042138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 3596881 - 3597063
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    ||||| || |||||||||||||| |||||||||||||| ||||||| | |||||||           |||||||||||||||||||||||||||||||||    
T  3596881 aatgatatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaga-tacataacacccaccaccccatgatttccggtc 3596979  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||| |||||||||||||| |||||||||||||||||  |||| | |||||||||||||||| |||||| || ||||||||||||    
T  3596980 aggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtaattattctgccatgtcattctt 3597063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 40779969 - 40780151
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||           ||||||||| ||||||||||||||||||||| |    
T  40779969 aatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaga-tacataacatccaccaccccatgatttccggcc 40780067  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||| |||||||||||||| |||||||||||||||||  |||| | ||||||||||||||||||||||| || ||||||||||||    
T  40780068 aggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattctt 40780151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 5 - 190
Target Start/End: Original strand, 1645804 - 1645989
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||           ||||||||||||||||||||||||||||||  |    
T  1645804 aatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaaaatacataacacccaccaccccatgatttccgacc 1645903  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    ||| |||||||||||| |||||||||||||||| ||  |||| | ||||||||||||||||||||||| || |||||| |||||||    
T  1645904 aggctgagattttattagctaacattaatttcaagactatttcttgataaaatctaagggtgattattctgccatgtctttcttaa 1645989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 5 - 190
Target Start/End: Original strand, 37985896 - 37986079
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||  ||||||| | |||||||           ||||||||||||||||||||||||||||||| |    
T  37985896 aatgacatggcacaataatcacctttagatttcagtcccatttattaatctttcataaaaaaaaa--tacataacacccaccaccccatgatttccggcc 37985993  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    ||  ||||||||||||||||| ||||||||||||||  |||| | ||||||||||||||||||||||| || ||||||||||||||    
T  37985994 agactgagattttattggctagcattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattcttaa 37986079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 32064971 - 32064788
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    ||||||||  ||||||||||||| |||||||||||||| ||||||| | |||||||           ||||||||||||| || |||||||||||||| |    
T  32064971 aatgacatgacacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaagatacataacacccatcagcccatgatttccggcc 32064872  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||| |||||||||||||| ||||||||||||||| || |||| | ||||||||||||||||||||||| || ||||||||||||    
T  32064871 aggctgagattttattggttaacattaatttcagaattatttcttgataaaatctaagggtgattattctgccatgtcattctt 32064788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 8454058 - 8453877
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||           ||||||||||||||||| |||| |||||||| |    
T  8454058 aatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaga--tacataacacccaccacaccataatttccggcc 8453961  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||| |||||||||||||  | |||||||||||||||  |||| | |||||||||||||||||||||||||||||||||||||||    
T  8453960 aggctgagattttattgtgttacattaatttcaggactatttcttgataaaatctaagggtgattattttgtcatgtcattctt 8453877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 72 - 190
Target Start/End: Complemental strand, 35353200 - 35353082
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    |||||||||||||||||| |||||||||||| |||| |||||||||||||| |||||||||||||| ||| |||| | ||||||||||||||||||||||    
T  35353200 tacataacacccaccacctcatgatttccggccaggctgagattttattggttaacattaatttcatgattatttcttgataaaatctaagggtgattat 35353101  T
Q  172 tttgtcatgtcattcttaa 190  Q
    | || ||||||||||||||    
T  35353100 tctgccatgtcattcttaa 35353082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 72 - 190
Target Start/End: Original strand, 41819684 - 41819802
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    |||||||||| |||||||||||||||||||| | || |||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||    
T  41819684 tacataacacacaccaccccatgatttccggccgggctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattat 41819783  T
Q  172 tttgtcatgtcattcttaa 190  Q
    | || ||| ||||||||||    
T  41819784 tctgccatatcattcttaa 41819802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 72 - 188
Target Start/End: Original strand, 24844765 - 24844880
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    ||||||||||||||||||| |||||||||  ||||| |||||||||||||||||||||||||||| ||| ||||| | |||||||||||||||||||||     
T  24844765 tacataacacccaccaccctatgatttccaatcaggatgagattttattggctaacattaatttcgggacaatttcttgataaaatctaagggtgatta- 24844863  T
Q  172 tttgtcatgtcattctt 188  Q
    |||||||||||||||||    
T  24844864 tttgtcatgtcattctt 24844880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 42754882 - 42755064
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| | |||||||||||| |||||||||||||| ||||||| | |||||||           |||||||||||||||| |||||||||| ||| |    
T  42754882 aatgacatggtacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaaa-tacataacacccaccatcccatgattttcggcc 42754980  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||| |||||||||||||| |||||||||||||| ||  |||| | ||||||||||||||||||||||| || ||||||||||||    
T  42754981 aggctgagattttattggttaacattaatttcatgactatttcttgataaaatctaagggtgattattctgccatgtcattctt 42755064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 72 - 188
Target Start/End: Original strand, 39772708 - 39772823
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    |||||||||||||||| |||||||||||||| | || ||||||||||||||||||||||||||||| ||  |||||| ||||||||||||||||||||||    
T  39772708 tacataacacccaccatcccatgatttccgg-ctggctgagattttattggctaacattaatttcaagactattttttgataaaatctaagggtgattat 39772806  T
Q  172 tttgtcatgtcattctt 188  Q
    | || ||||||||||||    
T  39772807 tctgccatgtcattctt 39772823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 15187785 - 15187603
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||           ||||||||||||||||| ||||||||||||| |    
T  15187785 aatgacatagcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaa--tacataacacccaccactccatgatttccggcc 15187688  T
Q  105 aggtt-gagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||| | |||||||||||||||||||||||||||| ||  |||| | |||||||||||||||| |||||| || ||| ||||||||    
T  15187687 aggctagagattttattggctaacattaatttcaagactatttcttgataaaatctaagggtaattattctgccatatcattctt 15187603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 72 - 188
Target Start/End: Original strand, 24211459 - 24211575
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||| ||  |||| | |||||||| |||||||||||||    
T  24211459 tacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaagactatttcttgataaaatttaagggtgattat 24211558  T
Q  172 tttgtcatgtcattctt 188  Q
    | || |||| |||||||    
T  24211559 tctgccatgccattctt 24211575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 72 - 188
Target Start/End: Original strand, 31347688 - 31347804
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    |||||||||||||| ||||||||||||| || | |   ||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||    
T  31347688 tacataacacccactaccccatgatttctggcccgacagagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattat 31347787  T
Q  172 tttgtcatgtcattctt 188  Q
    | || ||||||||||||    
T  31347788 tctgccatgtcattctt 31347804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 190
Target Start/End: Complemental strand, 14129084 - 14128905
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||           ||||||||||||||||||| ||||||| |||      
T  14129084 aatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaaa-tacataacacccaccaccctatgattttcggc- 14128987  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
        ||||||||||||||||||||||||||||| ||  |||| | ||||||||||||||||||||||| || ||||||||||||||    
T  14128986 ----tgagattttattggctaacattaatttcaagactatttcttgataaaatctaagggtgattattctgccatgtcattcttaa 14128905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 190
Target Start/End: Complemental strand, 32394074 - 32393899
Alignment:
Q  13 tgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtcaggttgag 112  Q
    ||||||||||||||| |||||||||||||| ||||||| | |||||||           ||||||||||| ||||||||||||||| |||  ||  ||||    
T  32394074 tgcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaa--tacataacacctaccaccccatgattttcggctagactgag 32393977  T
Q  113 attttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    ||||||||||||||||||||||||| ||  |||| | |||||||| |||||||||||||| || ||||||||||||||    
T  32393976 attttattggctaacattaatttcaagactatttcttgataaaatttaagggtgattattctgccatgtcattcttaa 32393899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 76 - 185
Target Start/End: Original strand, 27782027 - 27782136
Alignment:
Q  76 taacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttg 175  Q
    ||||||||||||||| ||||||||||| |||  | ||||||||||||||||||||||||||| || ||||| | ||||||||||||||||||||||| ||    
T  27782027 taacacccaccacccaatgatttccggccagactaagattttattggctaacattaatttcaagacaatttcttgataaaatctaagggtgattattctg 27782126  T
Q  176 tcatgtcatt 185  Q
     |||||||||    
T  27782127 ccatgtcatt 27782136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 72 - 188
Target Start/End: Original strand, 7017771 - 7017887
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    ||||||||||||||||||||||||||||||| | |   |||||||||||||||||||||||||| || | ||||| | |||||||||||||| |||||||    
T  7017771 tacataacacccaccaccccatgatttccggcccgacagagattttattggctaacattaattttagtacaatttcttgataaaatctaaggatgattat 7017870  T
Q  172 tttgtcatgtcattctt 188  Q
    | || ||||||||||||    
T  7017871 tctgccatgtcattctt 7017887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 72 - 188
Target Start/End: Original strand, 27835359 - 27835475
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    |||||||||||||||| |||||||||||||   ||| ||||||||||||||||||||||||||| | || |||||||  ||||||||||||| |||||||    
T  27835359 tacataacacccaccatcccatgatttccgtctaggctgagattttattggctaacattaatttgaagacaattttttaataaaatctaaggatgattat 27835458  T
Q  172 tttgtcatgtcattctt 188  Q
    |||  ||||||||||||    
T  27835459 tttaccatgtcattctt 27835475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 72 - 188
Target Start/End: Original strand, 3890523 - 3890638
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    ||||||||||||||||||||||||||| | | || | ||||||||||||||||||||||||||||  || ||||| | |||||||||||| |||||||||    
T  3890523 tacataacacccaccaccccatgattttcagccatgatgagattttattggctaacattaatttcgagacaatttcttgataaaatctaa-ggtgattat 3890621  T
Q  172 tttgtcatgtcattctt 188  Q
    | || ||||||||||||    
T  3890622 tctgccatgtcattctt 3890638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 72 - 188
Target Start/End: Complemental strand, 7022137 - 7022021
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    ||||||||||||||||||||||||||||||| | |    |||||||||||||||||||||||||| | | ||||| | ||||||||||||||||||||||    
T  7022137 tacataacacccaccaccccatgatttccggcccgacatagattttattggctaacattaatttcggtacaatttcttgataaaatctaagggtgattat 7022038  T
Q  172 tttgtcatgtcattctt 188  Q
    | || ||| ||||||||    
T  7022037 tctgccatatcattctt 7022021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 72 - 188
Target Start/End: Original strand, 30834961 - 30835069
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    |||||||||||||||||||||||||||||        ||||||||||||| |||||||||||||||||| ||||| | ||||||||| ||||||||||||    
T  30834961 tacataacacccaccaccccatgatttcc--------tgagattttattgactaacattaatttcaggacaatttcttgataaaatcaaagggtgattat 30835052  T
Q  172 tttgtcatgtcattctt 188  Q
    | || ||||||||||||    
T  30835053 tctgccatgtcattctt 30835069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 111 - 188
Target Start/End: Original strand, 15972822 - 15972899
Alignment:
Q  111 agattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    |||||||||||||||||||||| ||||| | ||||| | ||||||||||||||||||||||| |||||||||||||||    
T  15972822 agattttattggctaacattaaattcagaacaatttcttgataaaatctaagggtgattattctgtcatgtcattctt 15972899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 72 - 184
Target Start/End: Complemental strand, 10044502 - 10044390
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    ||||||||| ||||||| ||||||||||||  ||| ||||||||||||||||||||||||||| ||  |  |||| | |||||||| ||||| |||||||    
T  10044502 tacataacaaccaccactccatgatttccgaccagattgagattttattggctaacattaattccaaaactatttcttgataaaatttaaggatgattat 10044403  T
Q  172 tttgtcatgtcat 184  Q
    | |||||||||||    
T  10044402 tctgtcatgtcat 10044390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 133
Target Start/End: Complemental strand, 30055741 - 30055615
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    ||||||||  |||||||||||||||||||||| ||||| ||||||| |||||||||           ||||||||| ||||||||||||||||||||| |    
T  30055741 aatgacatgacacaataatcacccttagattttagtctcatttattaacctttcataaaaaaaaaa-tacataacatccaccaccccatgatttccggcc 30055643  T
Q  105 aggttgagattttattggctaacattaat 133  Q
    | | |||||||||||||||||||||||||    
T  30055642 a-gctgagattttattggctaacattaat 30055615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 143
Target Start/End: Original strand, 37132521 - 37132653
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    ||||||||  |||||||||||||||||||||||||||||||||||| ||||||||             ||||||    ||||||||||||||||||  ||    
T  37132521 aatgacatgacacaataatcacccttagatttcagtcttatttattaacctttca--aaaaaaaaaaaacataa----caccaccccatgatttccaatc 37132614  T
Q  105 aggttgagattttattggctaacattaatttcaggataa 143  Q
    ||  ||||||||||||||||||||||||||||| |||||    
T  37132615 agactgagattttattggctaacattaatttcaagataa 37132653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 72 - 118
Target Start/End: Complemental strand, 38017093 - 38017047
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagatttta 118  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||    
T  38017093 tacataacacccaccaccccatgatttccggccaggctgagatttta 38017047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 24211212 - 24211267
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcat 60  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||    
T  24211212 aatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 24211267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 41819608 - 41819663
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcat 60  Q
    ||||||||  |||||||||||||||||||||||||||| ||||||| |||| ||||    
T  41819608 aatgacatgacacaataatcacccttagatttcagtctcatttattaacctatcat 41819663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 1503683 - 1503728
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatt 50  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  1503683 aatgacatggcacaataatcacctttagatttcagtctcatttatt 1503728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 30055708 - 30055744
Alignment:
Q  152 taaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||||||||||||||||||||| |||||||||||||||    
T  30055708 taaaatctaagggtgattattgtgtcatgtcattctt 30055744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 136
Target Start/End: Complemental strand, 30797200 - 30797137
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttc 136  Q
    ||||||| ||||||||||| |||||||||||| |||  || ||||||||||||||||| ||||||    
T  30797200 tacataagacccaccaccc-atgatttccggttagggagaaattttattggctaacatcaatttc 30797137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 149 - 188
Target Start/End: Original strand, 3817913 - 3817952
Alignment:
Q  149 cgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    |||||||||||||||||||||||| |||||||| ||||||    
T  3817913 cgataaaatctaagggtgattattctgtcatgtaattctt 3817952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 10044573 - 10044518
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcat 60  Q
    |||||||| |||||||||||||| |||||||||| ||| ||||||| | |||||||    
T  10044573 aatgacatggcacaataatcacctttagatttcaatctcatttattaatctttcat 10044518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 31347616 - 31347659
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttattta 48  Q
    |||||||| |||||||||||||| |||||||||||||| |||||    
T  31347616 aatgacatggcacaataatcacctttagatttcagtctcattta 31347659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 188
Target Start/End: Complemental strand, 41819639 - 41819605
Alignment:
Q  154 aaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||||||||||||||||||| |||||||||||||||    
T  41819639 aaatctaagggtgattattgtgtcatgtcattctt 41819605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 32064940 - 32064976
Alignment:
Q  154 aaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    |||||||| |||||||||| |||||||||||||||||    
T  32064940 aaatctaaaggtgattattgtgtcatgtcattcttaa 32064976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 186
Target Start/End: Complemental strand, 37132552 - 37132520
Alignment:
Q  154 aaatctaagggtgattattttgtcatgtcattc 186  Q
    ||||||||||||||||||| |||||||||||||    
T  37132552 aaatctaagggtgattattgtgtcatgtcattc 37132520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 98; Significance: 3e-48; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 4974575 - 4974757
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||           |||||||||||||||||| |||||||||||| |    
T  4974575 aatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcataaaaaaaaaa-tacataacacccaccacctcatgatttccggcc 4974673  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    |   |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| || ||||||||||||    
T  4974674 aaactgagattttattggctaacattaatttcaggataatttcttgataaaatctaagggtgattattctgccatgtcattctt 4974757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 42612036 - 42611854
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||||||||||| | |||||||           |||||||||||||||||||||||||||||||||    
T  42612036 aatgacatggcacaataatcacctttagatttcagtcttatttattaatctttcataaaaaaaaaa-tacataacacccaccaccccatgatttccggtc 42611938  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||  ||| ||||||||||||||||||||||||| ||  |||| | ||||||||||||||||||||||| || ||||||||||||    
T  42611937 agactgaaattttattggctaacattaatttcaagactatttcttgataaaatctaagggtgattattctgccatgtcattctt 42611854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 5 - 190
Target Start/End: Complemental strand, 3962203 - 3962020
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||           ||||||||||||||||||||||||||||||| |    
T  3962203 aatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaa--tacataacacccaccaccccatgatttccggcc 3962106  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    | | ||||||||||||||||||||||||||||| ||  |||| | |||||||| |||||||||||||| |||||||||||||||||    
T  3962105 aagctgagattttattggctaacattaatttcaagactatttcttgataaaatttaagggtgattattctgtcatgtcattcttaa 3962020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 5 - 190
Target Start/End: Complemental strand, 24395196 - 24395013
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||           ||||||||||||||||||||||||||||||| |    
T  24395196 aatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaataaa--tacataacacccaccaccccatgatttccggcc 24395099  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    |||||||||||||||||||||||||||||||||| |  |||||| |||||||||||| |||  ||||| || ||||||||||||||    
T  24395098 aggttgagattttattggctaacattaatttcagaactattttttgataaaatctaaaggttgttattctgccatgtcattcttaa 24395013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 48880767 - 48880949
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||  |||||||||||| | ||||||| | |||||||           ||||||||||||||||||||||||||||||| |    
T  48880767 aatgacatggcacaataatcacatttagatttcagtttcatttattaatctttcataaaaaaaaga-tacataacacccaccaccccatgatttccggcc 48880865  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||| |||||||||||||| |||||||||||||||||  |||| | ||||||||||||||||||||||| |||||||||||||||    
T  48880866 aggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgtcatgtcattctt 48880949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 5 - 190
Target Start/End: Complemental strand, 42696308 - 42696124
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| | ||||||||||||||||||||||||||| ||||||| || ||||||           ||||||||| |||||||||| |||||||||| |    
T  42696308 aatgacatggtacaataatcacccttagatttcagtctcatttattaacttttcataaaaaaaaaa-tacataacatccaccaccccttgatttccggcc 42696210  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    ||||||||||||||||| |||||||||||||||||| ||||| | |||||||| |||||||||||||| ||  |||||||||||||    
T  42696209 aggttgagattttattgactaacattaatttcaggacaatttcttgataaaatataagggtgattattctgctatgtcattcttaa 42696124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 15 - 190
Target Start/End: Complemental strand, 29737359 - 29737180
Alignment:
Q  15 cacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnn----tacataacacccaccaccccatgatttccggtcaggttg 110  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||               |||||||| ||||| ||||||||||||||||||||||||    
T  29737359 cacaataatcacccttagatttcagtctcatttattaacctttcatagaaagaaaaaaaaatacataactcccactaccccatgatttccggtcaggttg 29737260  T
Q  111 agattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    |||||||||||||||||||||||||| ||| ||||| |  |||||||||||||||||||||| |  ||||||||||||||    
T  29737259 agattttattggctaacattaatttcgggacaatttcttaataaaatctaagggtgattattctaccatgtcattcttaa 29737180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 45637936 - 45637755
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||           ||||||||| ||||||||||||||||||||| |    
T  45637936 aatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaa--tacataacatccaccaccccatgatttccggcc 45637839  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||  ||||||||||||||||| ||||||||||||||  |||| | ||||||||||||||||||||||| || ||||||||||||    
T  45637838 agactgagattttattggctagcattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattctt 45637755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 72 - 188
Target Start/End: Original strand, 20010004 - 20010119
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    |||||||||||||  ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  20010004 tacataacacccataaccccataatttccggccaggttgagattttattggctaacattaatttcaggacaattttttgataaaatctaagggtgattat 20010103  T
Q  172 tttgtcatgtcattctt 188  Q
    | ||| |||||||||||    
T  20010104 tctgt-atgtcattctt 20010119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 15329499 - 15329316
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||  |||||||||||||| ||||||| | |||||||            | ||||||| |||||||||||||||||||| |    
T  15329499 aatgacatggcacaataatcacttttagatttcagtctcatttattaatctttcataaaaaataaaaaaaataacactcaccaccccatgatttccggcc 15329400  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||  ||||||||||||| ||||||||||||||| ||  |||| | ||||||||||||||||||||||| |||||||||||||||    
T  15329399 agtctgagattttattgactaacattaatttcaagactatttcttgataaaatctaagggtgattattctgtcatgtcattctt 15329316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 72 - 190
Target Start/End: Complemental strand, 34482993 - 34482876
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    ||||||||||||||||||| ||||||||||| |||  ||||||||||||||||||||||||||||||||  |||| | ||||||||||||||||||||||    
T  34482993 tacataacacccaccaccc-atgatttccggccagactgagattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattat 34482895  T
Q  172 tttgtcatgtcattcttaa 190  Q
    | || ||||||||||||||    
T  34482894 tctgccatgtcattcttaa 34482876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 5 - 190
Target Start/End: Complemental strand, 18037202 - 18037019
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| | ||||||||||||||||||||||||||  |||||||  ||| ||||           |||||||||||||||||||||||||||| || |    
T  18037202 aatgacatggtacaataatcacccttagatttcagtcacatttatt--cctctcataaaaaaaaaaatacataacacccaccaccccatgatttctggcc 18037105  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
     |   ||||||||||||||||||||||||||||| | ||||||| |||||||| |||||||||||||| || ||||||||||||||    
T  18037104 cgacagagattttattggctaacattaatttcagtacaattttttgataaaatttaagggtgattattctgccatgtcattcttaa 18037019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 5 - 190
Target Start/End: Complemental strand, 30848794 - 30848610
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| ||| |||||||||| ||||||| | |||||||           |||||||||||||| | |||||||||||||| |    
T  30848794 aatgacatggcacaataatcacctttaaatttcagtctcatttattaatctttcataaaaaaaaga-tacataacacccactatcccatgatttccggcc 30848696  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    ||  |||||||||||||| |||||||||||||||||  |||| | |||||||||||||| |||||||| || ||||||||||||||    
T  30848695 agactgagattttattggttaacattaatttcaggactatttcttgataaaatctaaggatgattattctgccatgtcattcttaa 30848610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 37476916 - 37477104
Alignment:
Q  1 taataatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnn-tacataacacccaccaccccatgatttc 99  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||| |  ||| ||            ||||||||||||||||||||||||||||    
T  37476916 taataatgacatggcacaataatcacccttagatttcagtctcatttattca--ttttatacagaaaaaaaatacataacacccaccaccccatgatttc 37477013  T
Q  100 cggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    ||| | |   ||||||||||||||||||||||||||||| | ||||| | |||||||| ||||| |||||||| || ||||||||||||||    
T  37477014 cggcccgacagagattttattggctaacattaatttcagtacaatttcttgataaaatttaaggatgattattctgccatgtcattcttaa 37477104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 72 - 190
Target Start/End: Original strand, 25167756 - 25167874
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    ||||||||||||| ||||||||||||||||| |||  |||||||||||||| ||||||||||||||| |  |||| | |||||||||||||| |||||||    
T  25167756 tacataacacccatcaccccatgatttccggccagactgagattttattggttaacattaatttcagaactatttcttgataaaatctaaggatgattat 25167855  T
Q  172 tttgtcatgtcattcttaa 190  Q
    | || ||||||||||||||    
T  25167856 tctgccatgtcattcttaa 25167874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 35444714 - 35444601
Alignment:
Q  75 ataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattatttt 174  Q
    ||||||||||||| |||||||||| ||| |||| |||||||||||||| ||||||||||||||| |  |||| | ||||||||||||||||||||||| |    
T  35444714 ataacacccaccatcccatgattttcggccaggctgagattttattggttaacattaatttcagaactatttcttgataaaatctaagggtgattattct 35444615  T
Q  175 gtcatgtcattctt 188  Q
    | ||||||||||||    
T  35444614 gccatgtcattctt 35444601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 15238538 - 15238425
Alignment:
Q  75 ataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattatttt 174  Q
    |||||||||||||||||||||||||||| | |   |||||||||||| |||||||||||||||| | ||||| | |||||||||||| |||||||||| |    
T  15238538 ataacacccaccaccccatgatttccggcccgacagagattttattgactaacattaatttcagtacaatttcttgataaaatctaatggtgattattct 15238439  T
Q  175 gtcatgtcattctt 188  Q
    | ||||||||||||    
T  15238438 gccatgtcattctt 15238425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 72 - 188
Target Start/End: Original strand, 15577756 - 15577872
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    |||||||||||||||| |||||||||||||| |||  ||||||| ||||||||||||||||||||| ||   ||| | |||||| |||||||||||||||    
T  15577756 tacataacacccaccaacccatgatttccggccagactgagattatattggctaacattaatttcaagactttttcttgataaagtctaagggtgattat 15577855  T
Q  172 tttgtcatgtcattctt 188  Q
    | || ||||||||||||    
T  15577856 tctgccatgtcattctt 15577872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 40880713 - 40880814
Alignment:
Q  87 accccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattc 186  Q
    |||||||||||| ||  |||| | |||||||||||||||||||||||||||||||||||| |  ||||||| ||||| |||||||| || ||||||||||    
T  40880713 accccatgattttcgaccaggctaagattttattggctaacattaatttcaggataatttcttcataaaatttaaggatgattattctgccatgtcattc 40880812  T
Q  187 tt 188  Q
    ||    
T  40880813 tt 40880814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 72 - 190
Target Start/End: Original strand, 36790372 - 36790490
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    ||||||||||||||||||| |  | || |||  ||  |||||||||||||||||||||||||||||| | ||||| | |||||||| ||||||| |||||    
T  36790372 tacataacacccaccacccaaaaaatttcggctagactgagattttattggctaacattaatttcagaacaatttcttgataaaatttaagggtaattat 36790471  T
Q  172 tttgtcatgtcattcttaa 190  Q
    | || ||||||||||||||    
T  36790472 tctgccatgtcattcttaa 36790490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 35876469 - 35876414
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcat 60  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||    
T  35876469 aatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 35876414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 34483063 - 34483008
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcat 60  Q
    |||||||| |||||||||||||| |||||||||| ||| ||||||| | |||||||    
T  34483063 aatgacatggcacaataatcacctttagatttcaatctcatttattaatctttcat 34483008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 15238609 - 15238564
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatt 50  Q
    ||||||||  ||||||||||| |||||||||||||||| |||||||    
T  15238609 aatgacatgacacaataatcatccttagatttcagtctcatttatt 15238564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 15577687 - 15577732
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatt 50  Q
    ||||||||  ||||||||||||| |||||||||||||| |||||||    
T  15577687 aatgacatgtcacaataatcacctttagatttcagtctcatttatt 15577732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 25167696 - 25167733
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtct 42  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  25167696 aatgacatggcacaataatcacctttagatttcagtct 25167733  T

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Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 35445612 - 35445567
Alignment:
Q  15 cacaataatcacccttagatttcagtcttatttatttacctttcat 60  Q
    ||||||||||||| |||||||||||||| ||||||| | |||||||    
T  35445612 cacaataatcacctttagatttcagtctcatttattaatctttcat 35445567  T

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Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 15238578 - 15238614
Alignment:
Q  154 aaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    |||||||||| |||||||| |||||||||||||||||    
T  15238578 aaatctaaggatgattattgtgtcatgtcattcttaa 15238614  T

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Target: chr4 (Bit Score: 98; Significance: 3e-48; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 46442069 - 46441887
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||           ||||||||||||||||||||||||||||||| |    
T  46442069 aatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaga-tacataacacccaccaccccatgatttccggcc 46441971  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    |||||||||||||||||| |||||||||||||||||  |||| | |||||||||||||||||||||||||| ||||||||||||    
T  46441970 aggttgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattttgccatgtcattctt 46441887  T

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Target: chr4; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 5 - 190
Target Start/End: Original strand, 7744952 - 7745136
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    ||||||||||||||||||||||| |||||||||| ||| ||||||| |  ||||||           ||||||||||||||||||||||||||||||| |    
T  7744952 aatgacattgcacaataatcacctttagatttcaatctcatttattaatatttcataaaaaaaaaa-tacataacacccaccaccccatgatttccggcc 7745050  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    ||| ||||||||||||||||||||||||||||||||  |||| | ||||||||||||||||||||||| || ||||||||||||||    
T  7745051 aggctgagattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattcttaa 7745136  T

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Target: chr4; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 10442627 - 10442811
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttac-ctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggt 103  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||||  ||||||             ||||||||||||||||||||||||||||||     
T  10442627 aatgacatggcacaataatcacctttagatttcagtctcatttatttaatctttcaaaaaaaaaaaaaaacataacacccaccaccccatgatttccggc 10442726  T
Q  104 caggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    |||| ||||||||||||||||||||||||||||||||  |||| | ||||||||||||||||||||||| || ||||||||||||    
T  10442727 caggctgagattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattctt 10442811  T

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Target: chr4; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 49387727 - 49387910
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||           ||||||||| |||||||||||||||||||||      
T  49387727 aatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaagatacataacatccaccaccccatgatttccggct 49387826  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||| |||||||||||||| |||||||||||||||||  |||| | ||||||||||||||||||||||| || ||||||||||||    
T  49387827 aggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattctt 49387910  T

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Target: chr4; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 9089095 - 9088913
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||| | |||||||||||||| ||||||| | |||||||           ||||||||||||||||||||||||||||||| |    
T  9089095 aatgacatggcacaataatcatctttagatttcagtctcatttattaatctttcatacaaaaaaga-tacataacacccaccaccccatgatttccggcc 9088997  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||| |||||||||||||| |||||||||||||||||  |||| | ||||||||||||||||||||||| || ||||||||||||    
T  9088996 aggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattctt 9088913  T

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Target: chr4; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 36073574 - 36073393
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||           |||||||||||||||||||||||||||||||||    
T  36073574 aatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaga--tacataacacccaccaccccatgatttccggtc 36073477  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||| |||||||||||||| |||||||||||||| ||  |||| | |||||||| |||||||||||||| || ||||||||||||    
T  36073476 aggctgagattttattggttaacattaatttcatgaatatttcttgataaaatttaagggtgattattctgccatgtcattctt 36073393  T

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Target: chr4; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 21802160 - 21802344
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccac---caccccatgatttccg 101  Q
    ||||||||  |||||||||||||||||||||||||||| ||||||| | |||||||           ||||||||||||||   ||||||||||||||||    
T  21802160 aatgacatgacacaataatcacccttagatttcagtctcatttattaatctttcataaaaaaaaa--tacataacacccaccaccaccccatgatttccg 21802257  T
Q  102 gtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    | |||  |||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||| || ||||||||||||    
T  21802258 gccagactgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattctt 21802344  T

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Target: chr4; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 44893053 - 44893235
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||           |||||||||||||||| |||||||||| ||| |    
T  44893053 aatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaga-tacataacacccaccatcccatgattttcggcc 44893151  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||| |||||||||||||| |||||||||||||||||  |||| | ||||||||||||||||||||||| || ||||||||||||    
T  44893152 aggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattctt 44893235  T

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Target: chr4; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 44893651 - 44893469
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||           |||||||||||||||| |||||||||| ||| |    
T  44893651 aatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaga-tacataacacccaccatcccatgattttcggcc 44893553  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||| |||||||||||||| |||||||||||||||||  |||| | ||||||||||||||||||||||| || ||||||||||||    
T  44893552 aggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattctt 44893469  T

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Target: chr4; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 47290291 - 47290109
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| | |||||||||||| |||||||||||||| |||||||   |||||||           ||||||||||||||||||||||||||||||| |    
T  47290291 aatgacatggtacaataatcacctttagatttcagtctcatttattattctttcataaaaaaaaga-tacataacacccaccaccccatgatttccggcc 47290193  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||| |||||||||||||| |||||||||||||||||  |||| | ||||||||||||||||||||||| || ||||||||||||    
T  47290192 aggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattctt 47290109  T

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Target: chr4; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 53123256 - 53123074
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||| | |||||||||||||| ||||||| | |||||||           ||||||||||||||||||||||||||||||| |    
T  53123256 aatgacatggcacaataatcatctttagatttcagtctcatttattaatctttcatacaaaaaaga-tacataacacccaccaccccatgatttccggcc 53123158  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||  |||||||||||||| |||||||||||||||||  |||| | ||||||||||||||||||||||| || ||||||||||||    
T  53123157 agactgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattctt 53123074  T

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Target: chr4; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 5 - 190
Target Start/End: Original strand, 23964304 - 23964489
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| ||| |||||||| | |||||||||| ||| ||||||| | |||||||           |||||||||||||||||| ||||||||||||||    
T  23964304 aatgacatggcataataatcatctttagatttcaatctcatttattaatctttcataaaaaaaaaaatacataacacccaccaccgcatgatttccggtc 23964403  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    ||| ||||||||||||| ||||||||||||||| ||  |||| | ||||||||||||||||||||||| || ||||||||||||||    
T  23964404 aggctgagattttattgactaacattaatttcaagactatttcttgataaaatctaagggtgattattctgccatgtcattcttaa 23964489  T

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Target: chr4; HSP #13
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 4751672 - 4751489
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| ||||||||| |||| |||||||||||||| ||||||| | |||||||           ||||||||||||||||||||||||||||||  |    
T  4751672 aatgacatggcacaataaccacctttagatttcagtctcatttattaatctttcataaaaaagaaaatacataacacccaccaccccatgatttccgacc 4751573  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||  |||||||||||||| |||||||||||||||||  |||| | ||||||||||||||||| ||||| || ||||||||||||    
T  4751572 agactgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtggttattctgccatgtcattctt 4751489  T

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Target: chr4; HSP #14
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 30563434 - 30563279
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    ||||||||  |||||||||||| ||||||||||||||||||||||| |||||||||           ||||||||||||||||||||||||||||||| |    
T  30563434 aatgacatgacacaataatcacacttagatttcagtcttatttattaacctttcataaaaaaaaaa-tacataacacccaccaccccatgatttccggcc 30563336  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaa 161  Q
    ||| ||||||||||||||| |||||||||| ||||||||||| | ||||||||||||    
T  30563335 aggctgagattttattggccaacattaattgcaggataatttcttgataaaatctaa 30563279  T

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Target: chr4; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 31078659 - 31078841
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||| | |||||||||| ||| ||||||| | |||||||           ||||||||||||| ||||||||||||||||| |    
T  31078659 aatgacatggcacaataatcatctttagatttcaatctcatttattaatctttcataaaaaaaaga-tacataacacccatcaccccatgatttccggcc 31078757  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||| |||||||||||||| |||||||||||||||||  |||| | ||||||||||||||||||||||| || ||||||||||||    
T  31078758 aggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattctt 31078841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 72 - 190
Target Start/End: Original strand, 50156484 - 50156602
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||| | ||  |||| | ||||||||||||||||||||||    
T  50156484 tacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaattttatgactatttcttgataaaatctaagggtgattat 50156583  T
Q  172 tttgtcatgtcattcttaa 190  Q
    | || ||||||||||||||    
T  50156584 tctgccatgtcattcttaa 50156602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 2625062 - 2624880
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||           ||||||||||||||||| ||||||||||||| |    
T  2625062 aatgacatagcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaaa-tacataacacccaccactccatgatttccggcc 2624964  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||  |||||||||||||  |||||||||||||| ||| |||| | ||||||||||||||||||||||| || ||| ||||||||    
T  2624963 agactgagattttattgattaacattaatttcatgattatttcttgataaaatctaagggtgattattctgccatttcattctt 2624880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 17655586 - 17655473
Alignment:
Q  75 ataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattatttt 174  Q
    |||||||||| || |||||||||||||| |||| ||||||||||||||||||||||||||||||||  |||| | ||||||||||||||||||||||| |    
T  17655586 ataacacccatcatcccatgatttccggccaggctgagattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattct 17655487  T
Q  175 gtcatgtcattctt 188  Q
    | ||||||||||||    
T  17655486 gccatgtcattctt 17655473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 24128464 - 24128282
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    ||||||||  ||||||||| ||| |||||||||||||| ||||||| | |||||||           ||||||||| ||||||||||||||||||||| |    
T  24128464 aatgacatgacacaataattacctttagatttcagtctcatttattaatctttcataaaaaaaaga-tacataacatccaccaccccatgatttccggcc 24128366  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||| |||||||||||||| |||||||||||||||||  |||| | |||||||||||||| |||||||| || ||||||||||||    
T  24128365 aggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaaggatgattattctgccatgtcattctt 24128282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 72 - 188
Target Start/End: Complemental strand, 36073106 - 36072990
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    ||||||||||||||||||||||||||||||| |||  |||||||||||||| |||||||||||||||||  |||| | ||||||||||||||||| ||||    
T  36073106 tacataacacccaccaccccatgatttccggccagactgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtggttat 36073007  T
Q  172 tttgtcatgtcattctt 188  Q
    | || ||||||||||||    
T  36073006 tctgccatgtcattctt 36072990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 22199484 - 22199304
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||           ||||||||||||||||||| |||||||| || |    
T  22199484 aatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaa--tacataacacccaccaccc-atgatttctggcc 22199388  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||| ||||||||||||||||||||||| ||||| ||  |||| | |||||||||||||| |||||||| || ||||||||||||    
T  22199387 aggctgagattttattggctaacattagtttcaagactatttcttgataaaatctaaggctgattattctgccatgtcattctt 22199304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 2 - 188
Target Start/End: Original strand, 37934779 - 37934963
Alignment:
Q  2 aataatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccg 101  Q
    |||||||| ||  |||||||||||||||||||||||| ||| ||||||| |||||||||           ||||||||| |||||| ||||| |||||||    
T  37934779 aataatgatatgacacaataatcacccttagatttcaatctcatttattaacctttcataaaaaaaaa--tacataacaaccaccatcccataatttccg 37934876  T
Q  102 gtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
      |||  |||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||| |||| |  ||||||||||||    
T  37934877 accagactgagattttattggttaacattaatttcaggataatttcttgataaaatctaagggtgagtattctaccatgtcattctt 37934963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 33530524 - 33530710
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnnta----cataacacccaccaccccatgatttcc 100  Q
    |||||||| |||||||||||||| |||||||||||||||||||||| | |||||||            |    ||||||||||||||||| |||||||||    
T  33530524 aatgacatggcacaataatcacctttagatttcagtcttatttattaatctttcataaaaaaaataaaaaaaacataacacccaccaccc-atgatttcc 33530622  T
Q  101 ggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    || |||| ||| ||||||||||||||||||| ||||| ||  |||| | ||||||||||||||||||||||| || ||||||||||||    
T  33530623 ggccaggctgaaattttattggctaacattagtttcaagactatttcttgataaaatctaagggtgattattctgccatgtcattctt 33530710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 73 - 190
Target Start/End: Original strand, 36073650 - 36073767
Alignment:
Q  73 acataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattatt 172  Q
    ||||||||| |||||||||||||||||||| ||   |||||||||||||||||| |||||||| |||| ||||| |  |||||||||||  |||||||||    
T  36073650 acataacacgcaccaccccatgatttccggccaaactgagattttattggctaatattaattttaggacaatttcttcataaaatctaaaagtgattatt 36073749  T
Q  173 ttgtcatgtcattcttaa 190  Q
    ||||||||||||||||||    
T  36073750 ttgtcatgtcattcttaa 36073767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 73 - 190
Target Start/End: Complemental strand, 42671827 - 42671710
Alignment:
Q  73 acataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattatt 172  Q
    ||||||||| || |||||||| |||||||| ||  ||||||||||||||| |||||||||||| |||| ||||| | |||||||||||||||||||||||    
T  42671827 acataacactcatcaccccataatttccggccaaattgagattttattggttaacattaattttaggacaatttcttgataaaatctaagggtgattatt 42671728  T
Q  173 ttgtcatgtcattcttaa 190  Q
     || ||||||||||||||    
T  42671727 ctgccatgtcattcttaa 42671710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 72 - 188
Target Start/End: Complemental strand, 24392826 - 24392710
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    ||||||||||||| ||||||||||||||||| | |   |||||||||||| |||||||||||||||| | ||||| | |||||||| |||||||||||||    
T  24392826 tacataacacccatcaccccatgatttccggcccgacagagattttattgactaacattaatttcagtacaatttcttgataaaatttaagggtgattat 24392727  T
Q  172 tttgtcatgtcattctt 188  Q
    | || ||||||||||||    
T  24392726 tctgccatgtcattctt 24392710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 72 - 190
Target Start/End: Complemental strand, 37219784 - 37219666
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    ||||||||| ||| ||||| ||||||||||| |||  ||||||||||||| |||||||||||||||||| ||||| | |||||||| |||| ||||||||    
T  37219784 tacataacatccatcacccaatgatttccggccagactgagattttattgactaacattaatttcaggacaatttcttgataaaatttaagagtgattat 37219685  T
Q  172 tttgtcatgtcattcttaa 190  Q
    |||  ||||||||| ||||    
T  37219684 tttaccatgtcatttttaa 37219666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 190
Target Start/End: Complemental strand, 44744593 - 44744476
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    ||||||||||||||||||| ||||||||||| |||  ||| ||||||| | ||||||| |||||||||| ||||||| |||||||| |||||||||||||    
T  44744593 tacataacacccaccaccctatgatttccggccagactga-attttatcgactaacatcaatttcaggacaattttttgataaaatttaagggtgattat 44744495  T
Q  172 tttgtcatgtcattcttaa 190  Q
    | |  ||||||||| ||||    
T  44744494 tctaccatgtcatttttaa 44744476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 116 - 187
Target Start/End: Original strand, 11314184 - 11314255
Alignment:
Q  116 ttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattct 187  Q
    ||||||||||||||||||||||| | ||||| | |||| ||||||||| |||||||| ||||||||||||||    
T  11314184 ttattggctaacattaatttcagaacaatttcttgatataatctaaggatgattattctgtcatgtcattct 11314255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 37219856 - 37219801
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcat 60  Q
    |||||||| ||| |||||||| |||||||||||| ||||||||||| |||||||||    
T  37219856 aatgacatggcagaataatcatccttagatttcaatcttatttattaacctttcat 37219801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 24392899 - 24392854
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatt 50  Q
    |||||||| |||||||||||| |||||||||||||||| |||||||    
T  24392899 aatgacatagcacaataatcatccttagatttcagtctcatttatt 24392854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 11314092 - 11314144
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttaccttt 57  Q
    ||||||||  |||||||||||||||||||||  ||||||||||||| ||||||    
T  11314092 aatgacatgacacaataatcacccttagattatagtcttatttattaaccttt 11314144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 80 - 159
Target Start/End: Complemental strand, 9111416 - 9111337
Alignment:
Q  80 acccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatct 159  Q
    ||||| ||||||||||||| ||| ||||| || |||||||||| |||| ||||||||  || ||||| | ||||||||||    
T  9111416 acccatcaccccatgattttcggccaggtagaaattttattggttaactttaatttcgagacaatttcttgataaaatct 9111337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 36073176 - 36073121
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcat 60  Q
    |||||||| ||||||||| |||| |||||||||||||| ||||||| | |||||||    
T  36073176 aatgacatggcacaataaccacctttagatttcagtctcatttattaatctttcat 36073121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 188
Target Start/End: Complemental strand, 21802191 - 21802157
Alignment:
Q  154 aaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||||||||||||||||||| |||||||||||||||    
T  21802191 aaatctaagggtgattattgtgtcatgtcattctt 21802157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 188
Target Start/End: Complemental strand, 11314122 - 11314089
Alignment:
Q  155 aatctaagggtgattattttgtcatgtcattctt 188  Q
    |||||||||||||||||| |||||||||||||||    
T  11314122 aatctaagggtgattattgtgtcatgtcattctt 11314089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 1e-44; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 5 - 190
Target Start/End: Complemental strand, 4892427 - 4892243
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||           ||||||||||||||||||||||||||||||| |    
T  4892427 aatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcattaaaagaaga-tacataacacccaccaccccatgatttccggcc 4892329  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    ||| |||||||||||||| |||||||||||||||||  |||| | ||||||||||||||||||||||| || ||||||||||||||    
T  4892328 aggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattcttaa 4892243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 5 - 190
Target Start/End: Complemental strand, 25398463 - 25398279
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||           ||||||||||||||||||||||||||||||| |    
T  25398463 aatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaga-tacataacacccaccaccccatgatttccggcc 25398365  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    ||| |||||||||||||| |||||||||||||||||  |||| | ||||||||||||||||||||||| || ||||||||||||||    
T  25398364 aggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattcttaa 25398279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 5 - 190
Target Start/End: Original strand, 11360971 - 11361155
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||| | |||||||||| ||| ||||||| | |||||||           ||||||||||||||||||||||||||||||| |    
T  11360971 aatgacatggcacaataatcatctttagatttcaatctaatttattaatctttcatacaaaaaaaa-tacataacacccaccaccccatgatttccggcc 11361069  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    ||| ||||||||||||||||||||||||||||||||  |||| | ||||||||||||||||||||||| || ||||||||||||||    
T  11361070 aggctgagattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattcttaa 11361155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 5 - 190
Target Start/End: Original strand, 33584169 - 33584353
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||           ||||||||||||||||||||||||||||||| |    
T  33584169 aatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaga-tacataacacccaccaccccatgatttccggcc 33584267  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    ||| |||||||||||||| |||||||||||||||||  |||| | |||||||| |||||||||||||| || ||||||||||||||    
T  33584268 aggctgagattttattggttaacattaatttcaggactatttcttgataaaatttaagggtgattattctgccatgtcattcttaa 33584353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 5 - 190
Target Start/End: Complemental strand, 2477861 - 2477677
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| ||||||| |||||| |||||||||||||||||||||| | |||||||           ||||||||||||||||||||||||||||||| |    
T  2477861 aatgacatggcacaatgatcacctttagatttcagtcttatttattaatctttcataaaaaaaaaa-tacataacacccaccaccccatgatttccggcc 2477763  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    ||| ||| ||||||||| ||||||||||||||| ||  |||| | ||||||||||||||||||||||| || ||||||||||||||    
T  2477762 aggctgaaattttattgactaacattaatttcaagactatttcttgataaaatctaagggtgattattctgccatgtcattcttaa 2477677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 5 - 185
Target Start/End: Complemental strand, 12851027 - 12850847
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| ||||||||| |||| |||||||||||||| ||||||| | |||||||           ||||||||||||||||||||||||||||||| |    
T  12851027 aatgacatggcacaataaccacctttagatttcagtctcatttattaatctttcataaaaaagaaaatacataacacccaccaccccatgatttccggcc 12850928  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcatt 185  Q
    ||| |||||||||||||| |||||||||||||||||  |||| | ||||||||||||||||| ||||| || |||||||||    
T  12850927 aggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtggttattctgccatgtcatt 12850847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 14138892 - 14138711
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||| ||| ||||||| | |||||||           |||||||||||||||||||||||||||||| ||    
T  14138892 aatgacatggcacaataatcacctttagatttcaatctcatttattaatctttcataaaaaaaaa--tacataacacccaccaccccatgatttccgatc 14138795  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||| ||||||||||||||||||||||||||||||||  |||| | |||||||| |||||||||||||| || ||||| ||||||    
T  14138794 aggctgagattttattggctaacattaatttcaggactatttcttgataaaatttaagggtgattattctgccatgtaattctt 14138711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 72 - 188
Target Start/End: Original strand, 31640846 - 31640962
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| || ||||| | ||||||||||||||||| ||||    
T  31640846 tacataacacccaccaccccatgatttccggccaggctgagattttattggctaacattaatttcatgacaatttcttgataaaatctaagggtggttat 31640945  T
Q  172 tttgtcatgtcattctt 188  Q
    | || ||||||||||||    
T  31640946 tctgccatgtcattctt 31640962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 3363004 - 3362821
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    ||||||||  |||||||| |||| |||||||||||||| ||||||| | |||||||           ||||||||||||||||||||||||||||||| |    
T  3363004 aatgacatgacacaataaccacctttagatttcagtctcatttattaatctttcataaaaaaaaagatacataacacccaccaccccatgatttccggcc 3362905  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||  |||||||||||||| |||||||||||||||||  |||| | ||||||||||||||||| ||||| || ||||||||||||    
T  3362904 agactgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtggttattctgccatgtcattctt 3362821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 4433848 - 4434029
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||||||||||| | |||||||           |||||||||||||||| |||||||||||||| |    
T  4433848 aatgacatggcacaataatcacctttagatttcagtcttatttattaatctttcataaaaaaaaa--tacataacacccaccatcccatgatttccggcc 4433945  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||  |||||||||||||| ||||||||||||||| |  |||| | ||||||||||||||||||||||| || ||| ||||||||    
T  4433946 agactgagattttattggttaacattaatttcagaactatttcttgataaaatctaagggtgattattctgccatatcattctt 4434029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 5 - 190
Target Start/End: Original strand, 37321633 - 37321817
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    ||||| || |||||||||||||| |||||||||||||| ||||||| | |||||||           |||||||||||||||||||||||||||||||      
T  37321633 aatgaaatggcacaataatcacctttagatttcagtctcatttattaatctttcataaataaaaaa-tacataacacccaccaccccatgatttccggct 37321731  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    ||  ||||||||||||||||||||||||||||| ||  |||| | |||||||| |||||||||||||| || ||||||||||||||    
T  37321732 agactgagattttattggctaacattaatttcaagactatttattgataaaatttaagggtgattattctgccatgtcattcttaa 37321817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 6043352 - 6043533
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||           ||||||||||||| ||||||||||||||||| |    
T  6043352 aatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaa--tacataacacccaacaccccatgatttccggcc 6043449  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||| |||||||||||||| ||| ||||||||||| |  |||| | ||||||||||||||||||||||| |  ||||||||||||    
T  6043450 aggctgagattttattggttaatattaatttcagcactatttcttgataaaatctaagggtgattattcttccatgtcattctt 6043533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 8145598 - 8145418
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||           ||||||||||||||||||| ||||||||||  |    
T  8145598 aatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaa--tacataacacccaccaccc-atgatttccgacc 8145502  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||| ||||||||||||||||||||||| ||||| ||  |||| | ||||||||||||||||||||||| || ||||||||||||    
T  8145501 aggctgagattttattggctaacattagtttcaagactatttcttgataaaatctaagggtgattattctgccatgtcattctt 8145418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 22912897 - 22913076
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||  || ||||           ||||||||| |||||||||||||||||| || |    
T  22912897 aatgacatggcacaataatcacccttagatttcagtctcatttattt--ctctcataaaaaaaaa--tacataacatccaccaccccatgatttctggcc 22912992  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
     |   ||||||||||||||||||||||||||||| | ||||| | ||||||||||||||||||||||| || ||||||||||||    
T  22912993 cgacagagattttattggctaacattaatttcagtacaatttcttgataaaatctaagggtgattattctgccatgtcattctt 22913076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 38899566 - 38899748
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| ||||||||| |||| |||||||||||||| ||||||| | |||||||           || |||||||||||||||||||||||| ||| |    
T  38899566 aatgacatggcacaataaccacctttagatttcagtctcatttattaatctttcataaaaaaaaga-tatataacacccaccaccccatgattttcggcc 38899664  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||  |||||||||||||| |||||||||||||||||  |||| | ||||||||||||||||| ||||| || ||||||||||||    
T  38899665 agactgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtggttattctgccatgtcattctt 38899748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 5 - 185
Target Start/End: Original strand, 3521847 - 3522025
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||           ||||||||||||||||||||||||||||||| |    
T  3521847 aatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaga--tacataacacccaccaccccatgatttccggcc 3521944  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcatt 185  Q
    |   | |||||||||||| ||||||||||||||| |  |||| | |||||||||||| |||||||||| || |||||||||    
T  3521945 aaactaagattttattggttaacattaatttcagaactatttcttgataaaatctaatggtgattattctgccatgtcatt 3522025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 104 - 188
Target Start/End: Original strand, 12614671 - 12614755
Alignment:
Q  104 caggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    |||| |||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||| |||||||||||||||    
T  12614671 caggctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattatgtcatgtcattctt 12614755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 17545594 - 17545707
Alignment:
Q  75 ataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattatttt 174  Q
    |||||||||||||||||||||||||||| | |   |||||||||||| |||||||||||||||| | ||||| | |||||||||||| |||||||||| |    
T  17545594 ataacacccaccaccccatgatttccggcccgacagagattttattgactaacattaatttcagtacaatttcttgataaaatctaatggtgattattct 17545693  T
Q  175 gtcatgtcattctt 188  Q
    | ||||||||||||    
T  17545694 gccatgtcattctt 17545707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 72 - 136
Target Start/End: Complemental strand, 27481981 - 27481917
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttc 136  Q
    ||||||||||||||||||||||||||||||   ||| ||| ||||||||||||||||||||||||    
T  27481981 tacataacacccaccaccccatgatttccgactaggatgaaattttattggctaacattaatttc 27481917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 12614578 - 12614633
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcat 60  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| |||||||||    
T  12614578 aatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 12614633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 72 - 140
Target Start/End: Original strand, 36880229 - 36880297
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcagga 140  Q
    ||||||||| |||||| ||||| |||||||  |||  ||| ||||||||||||||||||||||||||||    
T  36880229 tacataacatccaccatcccataatttccgaccagactgaaattttattggctaacattaatttcagga 36880297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 13664771 - 13664739
Alignment:
Q  18 aataatcacccttagatttcagtcttatttatt 50  Q
    |||||||||||||||||||||||||||||||||    
T  13664771 aataatcacccttagatttcagtcttatttatt 13664739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 17545522 - 17545567
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatt 50  Q
    ||||||||  ||||||||||| |||||||||||||||| |||||||    
T  17545522 aatgacatgacacaataatcatccttagatttcagtctcatttatt 17545567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 17545553 - 17545517
Alignment:
Q  154 aaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    |||||||||| |||||||| |||||||||||||||||    
T  17545553 aaatctaaggatgattattgtgtcatgtcattcttaa 17545517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 90; Significance: 2e-43; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 44094922 - 44094741
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    ||||||||  ||||||||||||| |||||||||||||| ||||||| | |||||||           ||||||||||||||||||||||||||||||| |    
T  44094922 aatgacatgacacaataatcacctttagatttcagtctcatttattaatctttcataaagaaaaa--tacataacacccaccaccccatgatttccggcc 44094825  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||  ||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||| || ||||||||||||    
T  44094824 agactgagattttattggctaacattaatttcaggattatttcttgataaaatctaagggtgattattctgccatgtcattctt 44094741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 5 - 190
Target Start/End: Complemental strand, 25463901 - 25463717
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||| ||||| ||||||| | |||||||           ||||||||||||||||||||||||||||||| |    
T  25463901 aatgacatggcacaataatcacctttagatttaagtctcatttattaatctttcataaaaaaaaaa-tacataacacccaccaccccatgatttccggcc 25463803  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    ||| ||||||||||||||||||||||||||||| ||  |||| | ||||||||||||||||||||||| || ||||||||||||||    
T  25463802 aggctgagattttattggctaacattaatttcaagactatttcttgataaaatctaagggtgattattctgccatgtcattcttaa 25463717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 19015629 - 19015447
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||           ||||||||||||||||||||||||||||||| |    
T  19015629 aatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcatacaaaaaaga-tacataacacccaccaccccatgatttccggcc 19015531  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||| |||||||||||||| |||||||||||||||||  |||| | ||||||||||||||||||||||| || ||| ||||||||    
T  19015530 aggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatatcattctt 19015447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 40215213 - 40215031
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| |  ||||||           ||||||||||||||||||||||||||||||| |    
T  40215213 aatgacatggcacaataatcacctttagatttcagtctcatttattaatatttcataaaaaaaaaa-tacataacacccaccaccccatgatttccggcc 40215115  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||| ||||||||||||||||||||||||||||| ||  |||| | ||||||||||||||||||||||| || ||||||||||||    
T  40215114 aggctgagattttattggctaacattaatttcaagactatttcttgataaaatctaagggtgattattctgccatgtcattctt 40215031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 5 - 190
Target Start/End: Original strand, 41876282 - 41876466
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||           ||||||||||||||||||||||||||| ||| |    
T  41876282 aatgacatagcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaga-tacataacacccaccaccccatgattttcggcc 41876380  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    ||| |||||||||||||| |||||||||||||||||  |||| | ||||||| ||||||||||||||| || ||||||||||||||    
T  41876381 aggctgagattttattggttaacattaatttcaggactatttcttgataaaacctaagggtgattattctgccatgtcattcttaa 41876466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 72 - 190
Target Start/End: Original strand, 27523161 - 27523279
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    ||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||| ||| ||||| | |||||||| |||||||||||||    
T  27523161 tacataacacccatcaccccatgatttccggccaggatgagattttattggctaacattaatttcgggacaatttcttgataaaatttaagggtgattat 27523260  T
Q  172 tttgtcatgtcattcttaa 190  Q
    | |||||||||||||||||    
T  27523261 tctgtcatgtcattcttaa 27523279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 6883712 - 6883530
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| ||| |||| ||||| |||||||||||||| ||||||| | |||||||           ||||||||||||||||||||||||||||||| |    
T  6883712 aatgacatggcataatattcacctttagatttcagtctcatttattaatctttcataaaaaaaaga-tacataacacccaccaccccatgatttccggcc 6883614  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||| |||||||||||||| |||||||||||||||||  |||| | ||||||||||||||||||||||| || ||||||||||||    
T  6883613 aggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattctt 6883530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 5 - 190
Target Start/End: Complemental strand, 51737730 - 51737546
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||           ||||||||||||||||||||||||||| |||||    
T  51737730 aatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaga-tacataacacccaccaccccatgattttcggtc 51737632  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    ||| |||||||||||||| |||||||||||||||||  |||| | |||||||| |||||||||||||| || | | ||||||||||    
T  51737631 aggctgagattttattggttaacattaatttcaggactatttcttgataaaatttaagggtgattattctgccttatcattcttaa 51737546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 9 - 188
Target Start/End: Original strand, 36966552 - 36966730
Alignment:
Q  9 acattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtcaggt 108  Q
    |||| |||||||||||||| |||||||||||||| ||||||| | |||||||           ||||||||||||||||||||||||||||||| |||      
T  36966552 acatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaga-tacataacacccaccaccccatgatttccggccagac 36966650  T
Q  109 tgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    |||||||||||||| |||||||||||||||||  |||| | ||||||||||||||||||||||| || ||| ||||||||    
T  36966651 tgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatatcattctt 36966730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 37821674 - 37821856
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    ||||||||  ||||||||||||| |||||||||||||| ||||||| | |||||||           ||||||||||||| ||||||||||||| ||| |    
T  37821674 aatgacatgacacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaga-tacataacacccaacaccccatgattttcggcc 37821772  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||| |||||||||||||| |||||||||||||||||  |||| | ||||||||||||||||||||||| || ||| ||||||||    
T  37821773 aggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatatcattctt 37821856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 72 - 188
Target Start/End: Complemental strand, 40273861 - 40273745
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    ||||||||||||||||||||||||||||||| | |   ||||||||||||||||||||||||||||| | ||||| |  |||||||||||||||||||||    
T  40273861 tacataacacccaccaccccatgatttccggcccgacagagattttattggctaacattaatttcagtacaatttcttaataaaatctaagggtgattat 40273762  T
Q  172 tttgtcatgtcattctt 188  Q
    |||| ||||||||||||    
T  40273761 tttgacatgtcattctt 40273745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 9910131 - 9910315
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnn-tacataacacccaccaccccatgatttccggt 103  Q
    |||||||| |||||||||||||| ||||||||||| |||||||||| | |||||||            | |||||||||||||||||||||||||||||     
T  9910131 aatgacatggcacaataatcacctttagatttcagacttatttattaatctttcataaaaaaaaaagatgcataacacccaccaccccatgatttccggc 9910230  T
Q  104 caggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||   |||||||||||||| |||||||||||||||||  |||| | |||||||||||||| |||||||| || ||||||||||||    
T  9910231 catactgagattttattggttaacattaatttcaggactatttcttgataaaatctaaggttgattattctgccatgtcattctt 9910315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 3559772 - 3559658
Alignment:
Q  76 taacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttg 175  Q
    ||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||| ||  |||| | |||||||| |||||||||||||| ||    
T  3559772 taacacccaccaccccatgatttccgcccaggctgagattttattggctaacattaatttcaagactatttcttgataaaatttaagggtgattattctg 3559673  T
Q  176 tcatgtcattcttaa 190  Q
     ||||||||||||||    
T  3559672 ccatgtcattcttaa 3559658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 32000106 - 32000289
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnn--tacataacacccaccaccccatgatttccgg 102  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||| |  ||||||             |||||||||||||||||||||||||||||||    
T  32000106 aatgacatggcacaataatcacccttagatttcagtctcatttattca--tttcataaaaaataaaaaatacataacacccaccaccccatgatttccgg 32000203  T
Q  103 tcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
       |    |||||||||||||||||||||||||||| | ||||| | ||||||||||||||||| ||||| |||||||||||||||    
T  32000204 ctcgacatagattttattggctaacattaatttcagtacaatttcttgataaaatctaagggtggttattctgtcatgtcattctt 32000289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 158
Target Start/End: Original strand, 20304970 - 20305123
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||  | |||||||           |||||||||||||||| |||||||||| ||| |    
T  20304970 aatgacatggcacaataatcacctttagatttcagtctcatttatcaatctttcataaaaaaaaaaatacataacacccaccatcccatgattttcggcc 20305069  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatc 158  Q
    | | ||||||||||||||||||||||||||||||||| |||| | |||||||||    
T  20305070 aagctgagattttattggctaacattaatttcaggattatttcttgataaaatc 20305123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 172
Target Start/End: Complemental strand, 25973632 - 25973472
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    ||||||||  ||||||||||||| ||| |||||||||| ||||||| | |||||||           ||||||||||||||||||||||||||| ||| |    
T  25973632 aatgacatgacacaataatcacctttaaatttcagtctcatttattaatctttcataaaaaaaa---tacataacacccaccaccccatgattttcggcc 25973536  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattatt 172  Q
    ||    ||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||    
T  25973535 ag----agattttattggctaacattaatttcaggattatttcttgataaaatctaagggtgattatt 25973472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 72 - 188
Target Start/End: Original strand, 44690935 - 44691051
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    ||||||||||||| ||||||||||||||||| |||  |||||||||||||||||||||||||||  ||||||||| | ||||||||||||| || |||||    
T  44690935 tacataacacccaacaccccatgatttccggccagactgagattttattggctaacattaattttgggataatttcttgataaaatctaagagttattat 44691034  T
Q  172 tttgtcatgtcattctt 188  Q
    | || ||||| ||||||    
T  44691035 tctgccatgtaattctt 44691051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 190
Target Start/End: Complemental strand, 18404601 - 18404483
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    ||||||||||||||||||| ||||||||||  ||   ||||||||||||||||||||||||||||||||  |||| | |||||||||||| |||||||||    
T  18404601 tacataacacccaccaccctatgatttccgaccaaactgagattttattggctaacattaatttcaggactatttcttgataaaatctaaaggtgattat 18404502  T
Q  172 tttgtcatgtcattcttaa 190  Q
    | |  ||||||||||||||    
T  18404501 tctaccatgtcattcttaa 18404483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 188
Target Start/End: Original strand, 33786543 - 33786657
Alignment:
Q  74 cataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattt 173  Q
    ||||||| ||||||||||||||||||||| | |   ||||||||||||||||||||||||||||| | ||||| | |||||||| ||||||||||||||     
T  33786543 cataacatccaccaccccatgatttccggcccgacagagattttattggctaacattaatttcagtacaatttcttgataaaatttaagggtgattattg 33786642  T
Q  174 tgtcatgtcattctt 188  Q
    || ||||||||||||    
T  33786643 tgccatgtcattctt 33786657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 114 - 188
Target Start/End: Original strand, 16045746 - 16045820
Alignment:
Q  114 ttttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    |||||||||||||||||||||||| ||  |||| | ||||||||||||||||||||||| || ||||||||||||    
T  16045746 ttttattggctaacattaatttcaagaatatttcttgataaaatctaagggtgattattctgccatgtcattctt 16045820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 190
Target Start/End: Complemental strand, 10167613 - 10167441
Alignment:
Q  16 acaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtcaggttgagatt 115  Q
    |||||||||||| |||||||||||||||||||||| |  ||||||           |||| ||||| |||||  |||| ||||||||||||    | |||    
T  10167613 acaataatcacctttagatttcagtcttatttattaatttttcataaaaaaaaa--tacacaacacacaccaaaccataatttccggtcagaccaaaatt 10167516  T
Q  116 ttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    |||||||||||||||||||| | || ||||||| ||||||||||||   |||||||| | |||||||||||||||    
T  10167515 ttattggctaacattaatttaaagacaattttttgataaaatctaaaaatgattattctatcatgtcattcttaa 10167441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 34519874 - 34519817
Alignment:
Q  115 tttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattatt 172  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||  |||||||    
T  34519874 tttattggctaacattaatttcaggacaattttttgataaaatctaaggtcgattatt 34519817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 33786471 - 33786516
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatt 50  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||    
T  33786471 aatgacatggcacaataatcacccttagatttcagtctcatttatt 33786516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 40273933 - 40273888
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatt 50  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||    
T  40273933 aatgacatggcacaataatcacccttagatttcagtctcatttatt 40273888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 72 - 136
Target Start/End: Complemental strand, 52329427 - 52329364
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttc 136  Q
    ||||||||||| ||||||| |||||||| || |||| |||||||||||||| |||||||||||||    
T  52329427 tacataacacctaccaccc-atgatttctggccaggctgagattttattggttaacattaatttc 52329364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 136
Target Start/End: Complemental strand, 51621085 - 51621025
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttc 136  Q
    ||||||||| |||||||||||||||||||| ||    ||||||||||||| ||||||||||||||    
T  51621085 tacataacatccaccaccccatgatttccgatc----tgagattttattgactaacattaatttc 51621025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 52329500 - 52329445
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcat 60  Q
    |||||||| ||| ||||||||||||||||||||||||||| ||||| || ||||||    
T  52329500 aatgacatagcagaataatcacccttagatttcagtcttaattattaacgtttcat 52329445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 44690862 - 44690907
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatt 50  Q
    |||||||| ||| |||||||||||||||||| ||||||||||||||    
T  44690862 aatgacatggcagaataatcacccttagattccagtcttatttatt 44690907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 18404673 - 18404618
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcat 60  Q
    |||||||| |||||||||||||  |||||||||||||| ||||||| | |||||||    
T  18404673 aatgacatggcacaataatcacatttagatttcagtctcatttattaatctttcat 18404618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 48074 - 47893
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||| | |||||||||||||| ||||||| | |||||||           ||||||||||||||||||||||||||||||| |    
T  48074 aatgacatagcacaataatcatctttagatttcagtctcatttattaatctttcataaaaataaa--tacataacacccaccaccccatgatttccggcc 47977  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||| |||||||||||||| |||||||||||||||||  |||| | ||||||||||||||||||||||| || ||||||||||||    
T  47976 aggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattctt 47893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 5 - 190
Target Start/End: Complemental strand, 4621 - 4437
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    ||||| || |||||||||||||| |||||||||||||| ||||||| | |||||||           ||||||||||||||||||||||||||| ||| |    
T  4621 aatgatatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaacaga-tacataacacccaccaccccatgattttcggcc 4523  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattcttaa 190  Q
    ||| |||||||||||||| |||||||||||||||||  |||| | ||||||||||||||||||||||| || ||||||||||||||    
T  4522 aggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgtcattcttaa 4437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 41224 - 41054
Alignment:
Q  16 acaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtcaggttgagatt 115  Q
    |||||||||||| |||||||||||||| ||||||| | |||||||           ||||||||||||||||||||||||||||||| |||| |||||||    
T  41224 acaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaa--tacataacacccaccaccccatgatttccggccaggctgagatt 41127  T
Q  116 ttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    |||||||||||||||||||||| ||  |||| | ||||||||||||||||||||||| || ||||||||||||    
T  41126 ttattggctaacattaatttcaagactatttcttgataaaatctaagggtgattattctgccatgtcattctt 41054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 11846 - 11664
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||           |||||||||| |||||||||||||||| ||| |    
T  11846 aatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaaa-tacataacactcaccaccccatgattttcggcc 11748  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||| |||||||||||||| |||||||||||||| ||  |||| | ||||||||||||||||||||||| |||||||||||||||    
T  11747 aggctgagattttattggttaacattaatttcatgactatttcttgataaaatctaagggtgattattctgtcatgtcattctt 11664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 78; Significance: 3e-36; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 26161 - 25979
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||           |||||||||||||||| |||||||||||||| |    
T  26161 aatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaga-tacataacacccaccatcccatgatttccggcc 26063  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||  |||||||||||||| ||||||||||||||| |  |||| | ||||||||||||||||||||||| || ||||||||||||    
T  26062 agcctgagattttattggttaacattaatttcagaactatttcttgataaaatctaagggtgattattctgccatgtcattctt 25979  T

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Target: scaffold0228; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 16209 - 16027
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    |||||||| |||||||||||| | |||||||||||||| ||||||| | |||||||           |||||||||||||||| |||||||||||||| |    
T  16209 aatgacatggcacaataatcatctttagatttcagtctcatttattaatctttcataaaaaaaaga-tacataacacccaccatcccatgatttccggcc 16111  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||  |||||||||||||| ||||||||||||||| |  |||| | ||||||||||||||||||||||| || ||||||||||||    
T  16110 agcctgagattttattggttaacattaatttcagaactatttcttgataaaatctaagggtgattattctgccatgtcattctt 16027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 72 - 188
Target Start/End: Complemental strand, 8561 - 8445
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    |||||||||||||||| |||||||||||||| |||  |||||||||||||| ||||||||||||||| |  |||| | ||||||||||||||||||||||    
T  8561 tacataacacccaccatcccatgatttccggccagcctgagattttattggttaacattaatttcagaactatttcttgataaaatctaagggtgattat 8462  T
Q  172 tttgtcatgtcattctt 188  Q
    | || ||||||||||||    
T  8461 tctgccatgtcattctt 8445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 13067 - 12885
Alignment:
Q  5 aatgacattgcacaataatcacccttagatttcagtcttatttatttacctttcatnnnnnnnnnnntacataacacccaccaccccatgatttccggtc 104  Q
    ||||||||  ||||||||| ||| |||||||||||||| ||||||| | |||||||           ||||||||| ||||||||||||||||||||| |    
T  13067 aatgacatgacacaataattacctttagatttcagtctcatttattaatctttcataaaaaaaaga-tacataacatccaccaccccatgatttccggcc 12969  T
Q  105 aggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattctt 188  Q
    ||| |||||||||||||| |||||||||||||||||  |||| | |||||||||||||| |||||||| || ||||||||||||    
T  12968 aggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaaggatgattattctgccatgtcattctt 12885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 72 - 190
Target Start/End: Complemental strand, 3222 - 3109
Alignment:
Q  72 tacataacacccaccaccccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattat 171  Q
    ||||||||||||||||||| ||||||| |||      ||||||||||||||||||||||||||||| ||  |||| | ||||||||||||||||||||||    
T  3222 tacataacacccaccaccctatgattttcggc-----tgagattttattggctaacattaatttcaagactatttcttgataaaatctaagggtgattat 3128  T
Q  172 tttgtcatgtcattcttaa 190  Q
    | || ||||||||||||||    
T  3127 tctgccatgtcattcttaa 3109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 85570 - 85469
Alignment:
Q  87 accccatgatttccggtcaggttgagattttattggctaacattaatttcaggataatttttcgataaaatctaagggtgattattttgtcatgtcattc 186  Q
    |||||||||||| ||  |||| | |||||||||||||||||||||||||||||||||||| |  ||||||| ||||| |||||||| || ||||||||||    
T  85570 accccatgattttcgaccaggctaagattttattggctaacattaatttcaggataatttcttcataaaatttaaggatgattattctgccatgtcattc 85471  T
Q  187 tt 188  Q
    ||    
T  85470 tt 85469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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