View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6026_low_15 (Length: 429)

Name: NF6026_low_15
Description: NF6026
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6026_low_15
NF6026_low_15
[»] chr8 (60 HSPs)
chr8 (18-414)||(34861057-34861450)
chr8 (98-270)||(1977184-1977358)
chr8 (99-281)||(16983390-16983576)
chr8 (131-281)||(17499233-17499383)
chr8 (117-267)||(24055939-24056091)
chr8 (120-275)||(9952762-9952920)
chr8 (104-259)||(32072098-32072255)
chr8 (103-267)||(8903852-8904018)
chr8 (98-253)||(43506533-43506687)
chr8 (103-292)||(28413857-28414049)
chr8 (101-277)||(5979878-5980057)
chr8 (98-241)||(8914766-8914911)
chr8 (100-280)||(35151728-35151912)
chr8 (100-259)||(14236335-14236496)
chr8 (100-259)||(41727427-41727588)
chr8 (131-267)||(6098791-6098925)
chr8 (148-264)||(13214542-13214658)
chr8 (99-265)||(6387559-6387726)
chr8 (131-280)||(13407322-13407474)
chr8 (150-267)||(36804853-36804970)
chr8 (103-267)||(23685131-23685293)
chr8 (138-252)||(31301152-31301265)
chr8 (117-280)||(11962681-11962847)
chr8 (131-267)||(35689510-35689647)
chr8 (132-237)||(35797426-35797531)
chr8 (177-272)||(7493351-7493447)
chr8 (140-281)||(9193421-9193564)
chr8 (117-219)||(17716867-17716969)
chr8 (131-223)||(1961312-1961404)
chr8 (149-253)||(17741555-17741659)
chr8 (131-267)||(45246464-45246600)
chr8 (140-264)||(4674949-4675069)
chr8 (148-281)||(4319733-4319866)
chr8 (99-184)||(45218614-45218699)
chr8 (144-259)||(9453505-9453621)
chr8 (103-210)||(1423746-1423855)
chr8 (144-226)||(9192044-9192126)
chr8 (121-210)||(43026311-43026400)
chr8 (215-280)||(5095759-5095826)
chr8 (170-234)||(35819201-35819265)
chr8 (131-210)||(7599493-7599572)
chr8 (122-204)||(10868012-10868094)
chr8 (140-232)||(3099691-3099783)
chr8 (147-267)||(26637556-26637675)
chr8 (162-264)||(34952504-34952606)
chr8 (233-279)||(44742333-44742379)
chr8 (131-180)||(39023460-39023509)
chr8 (105-210)||(1205829-1205936)
chr8 (117-209)||(31711638-31711730)
chr8 (215-266)||(5727346-5727397)
chr8 (131-206)||(28211961-28212036)
chr8 (149-259)||(33417730-33417841)
chr8 (131-168)||(13856508-13856545)
chr8 (139-184)||(16314372-16314417)
chr8 (143-184)||(24184409-24184450)
chr8 (131-168)||(34303465-34303502)
chr8 (136-259)||(36629694-36629816)
chr8 (222-279)||(8671070-8671129)
chr8 (211-259)||(28700577-28700625)
chr8 (102-167)||(31691625-31691692)
[»] chr3 (77 HSPs)
chr3 (100-267)||(28529250-28529417)
chr3 (100-287)||(37776695-37776886)
chr3 (100-280)||(41451894-41452078)
chr3 (97-280)||(24734699-24734886)
chr3 (98-267)||(46160944-46161113)
chr3 (100-278)||(46450064-46450244)
chr3 (139-278)||(18427153-18427292)
chr3 (99-267)||(20493459-20493629)
chr3 (98-281)||(52123954-52124141)
chr3 (100-281)||(5452060-5452243)
chr3 (100-278)||(27243042-27243225)
chr3 (103-267)||(20791296-20791462)
chr3 (100-259)||(55452037-55452196)
chr3 (117-264)||(8824996-8825145)
chr3 (118-232)||(26310495-26310611)
chr3 (131-278)||(14236049-14236198)
chr3 (98-278)||(46575943-46576126)
chr3 (104-259)||(41387564-41387719)
chr3 (145-267)||(29588747-29588869)
chr3 (117-266)||(50156675-50156824)
chr3 (117-253)||(10948588-10948726)
chr3 (100-267)||(29755497-29755666)
chr3 (132-280)||(38414678-38414826)
chr3 (99-267)||(48351432-48351602)
chr3 (117-259)||(138779-138921)
chr3 (131-280)||(41707440-41707589)
chr3 (149-249)||(19345032-19345132)
chr3 (149-264)||(2419481-2419596)
chr3 (100-267)||(2008992-2009160)
chr3 (100-266)||(45515512-45515678)
chr3 (117-279)||(15790370-15790535)
chr3 (139-251)||(22604598-22604710)
chr3 (117-267)||(40702136-40702286)
chr3 (131-280)||(37600128-37600280)
chr3 (131-210)||(54140964-54141043)
chr3 (170-248)||(752461-752539)
chr3 (103-209)||(30624633-30624739)
chr3 (98-278)||(13809077-13809261)
chr3 (120-253)||(37285302-37285435)
chr3 (131-281)||(43016441-43016595)
chr3 (131-199)||(46237128-46237196)
chr3 (131-234)||(50661568-50661672)
chr3 (104-248)||(40715895-40716041)
chr3 (127-267)||(357786-357925)
chr3 (170-248)||(742025-742103)
chr3 (190-264)||(29388611-29388685)
chr3 (132-210)||(43657067-43657145)
chr3 (140-234)||(49072044-49072138)
chr3 (190-253)||(24429053-24429116)
chr3 (173-248)||(38138615-38138690)
chr3 (139-253)||(36750974-36751088)
chr3 (142-228)||(42340872-42340958)
chr3 (146-267)||(44844026-44844148)
chr3 (131-267)||(24748923-24749060)
chr3 (146-247)||(20586885-20586986)
chr3 (180-281)||(29718849-29718952)
chr3 (149-281)||(41607459-41607589)
chr3 (121-168)||(357876-357923)
chr3 (100-168)||(54140887-54140957)
chr3 (103-186)||(29389108-29389193)
chr3 (100-210)||(10769796-10769908)
chr3 (131-168)||(24748937-24748974)
chr3 (131-210)||(3313991-3314070)
chr3 (136-199)||(21232604-21232667)
chr3 (136-218)||(7419241-7419323)
chr3 (195-233)||(22856282-22856320)
chr3 (228-279)||(27243047-27243100)
chr3 (97-168)||(38928000-38928073)
chr3 (165-267)||(39186028-39186130)
chr3 (244-281)||(930641-930678)
chr3 (131-168)||(10769752-10769789)
chr3 (149-186)||(18722535-18722572)
chr3 (183-267)||(49418433-49418518)
chr3 (100-166)||(52951475-52951543)
chr3 (142-234)||(346194-346286)
chr3 (221-274)||(30624739-30624794)
chr3 (122-253)||(37926552-37926684)
[»] chr6 (36 HSPs)
chr6 (99-279)||(34905332-34905516)
chr6 (100-259)||(445815-445976)
chr6 (117-281)||(5106312-5106480)
chr6 (117-281)||(1392644-1392809)
chr6 (117-267)||(10133172-10133324)
chr6 (148-281)||(12780759-12780892)
chr6 (149-277)||(16851975-16852105)
chr6 (117-259)||(31116146-31116290)
chr6 (131-267)||(21987322-21987458)
chr6 (148-267)||(32112731-32112850)
chr6 (100-267)||(12753774-12753943)
chr6 (131-281)||(17144671-17144821)
chr6 (142-259)||(2675936-2676053)
chr6 (94-252)||(32122786-32122946)
chr6 (135-253)||(16187460-16187575)
chr6 (135-253)||(16187678-16187793)
chr6 (131-280)||(19090213-19090365)
chr6 (98-264)||(8441866-8442022)
chr6 (98-264)||(8450670-8450826)
chr6 (143-267)||(32598962-32599086)
chr6 (143-266)||(12784954-12785077)
chr6 (131-210)||(35128794-35128873)
chr6 (131-209)||(4595772-4595850)
chr6 (97-267)||(10060853-10061026)
chr6 (131-280)||(19737433-19737585)
chr6 (139-227)||(31443997-31444085)
chr6 (99-210)||(6531369-6531482)
chr6 (131-267)||(12690282-12690419)
chr6 (143-281)||(16436107-16436246)
chr6 (131-199)||(12327287-12327355)
chr6 (131-210)||(373429-373508)
chr6 (131-168)||(9940388-9940425)
chr6 (100-168)||(19090209-19090279)
chr6 (118-200)||(2931576-2931660)
chr6 (102-168)||(19737431-19737499)
chr6 (140-168)||(12488157-12488185)
[»] chr5 (61 HSPs)
chr5 (98-267)||(28490736-28490907)
chr5 (103-259)||(10141998-10142154)
chr5 (143-281)||(41330393-41330531)
chr5 (100-280)||(34368357-34368541)
chr5 (140-281)||(5413732-5413878)
chr5 (131-281)||(37455379-37455534)
chr5 (144-281)||(41105568-41105707)
chr5 (117-253)||(17537130-17537268)
chr5 (103-267)||(30325888-30326054)
chr5 (99-243)||(39246604-39246750)
chr5 (139-259)||(25710494-25710614)
chr5 (139-251)||(43405431-43405543)
chr5 (131-253)||(28434846-28434966)
chr5 (122-248)||(28090262-28090388)
chr5 (104-267)||(28223790-28223955)
chr5 (139-267)||(34384705-34384833)
chr5 (131-267)||(27592466-27592602)
chr5 (162-253)||(14553573-14553664)
chr5 (100-280)||(42224589-42224774)
chr5 (136-234)||(36337937-36338035)
chr5 (149-234)||(31885878-31885963)
chr5 (99-280)||(28611777-28611962)
chr5 (131-278)||(40971453-40971603)
chr5 (139-253)||(10950124-10950238)
chr5 (100-210)||(13456236-13456346)
chr5 (135-280)||(17568700-17568848)
chr5 (139-253)||(24990924-24991039)
chr5 (156-267)||(25919266-25919377)
chr5 (118-264)||(1923569-1923717)
chr5 (95-168)||(24915171-24915244)
chr5 (95-168)||(24991002-24991075)
chr5 (120-242)||(25630824-25630948)
chr5 (153-259)||(34479973-34480079)
chr5 (137-253)||(24915091-24915208)
chr5 (97-237)||(28155746-28155884)
chr5 (150-242)||(10666727-10666819)
chr5 (142-278)||(4714790-4714928)
chr5 (121-184)||(10253179-10253242)
chr5 (122-278)||(32401136-32401297)
chr5 (100-188)||(17700168-17700256)
chr5 (98-210)||(4959273-4959387)
chr5 (139-194)||(25564033-25564088)
chr5 (217-267)||(2935445-2935495)
chr5 (100-183)||(32309477-32309562)
chr5 (131-208)||(32050337-32050414)
chr5 (98-168)||(42224583-42224655)
chr5 (145-206)||(43541895-43541956)
chr5 (148-248)||(2525621-2525721)
chr5 (210-278)||(12076063-12076133)
chr5 (202-253)||(17434877-17434928)
chr5 (100-168)||(17568696-17568766)
chr5 (100-168)||(26072219-26072289)
chr5 (131-178)||(32050413-32050460)
chr5 (208-250)||(5465683-5465725)
chr5 (127-157)||(7137950-7137980)
chr5 (121-184)||(10299903-10299968)
chr5 (130-168)||(13456191-13456229)
chr5 (131-168)||(4959394-4959431)
chr5 (131-184)||(6263913-6263966)
chr5 (104-209)||(8912511-8912618)
chr5 (196-267)||(25002019-25002091)
[»] chr7 (71 HSPs)
chr7 (100-281)||(22189936-22190121)
chr7 (94-281)||(46517284-46517473)
chr7 (90-294)||(27888269-27888477)
chr7 (103-281)||(14795131-14795311)
chr7 (103-281)||(15242123-15242303)
chr7 (102-278)||(48374440-48374618)
chr7 (131-281)||(11824101-11824251)
chr7 (96-241)||(31502504-31502651)
chr7 (97-266)||(32205073-32205241)
chr7 (100-267)||(33008101-33008267)
chr7 (99-280)||(27949269-27949454)
chr7 (142-281)||(11692220-11692361)
chr7 (100-259)||(12263458-12263619)
chr7 (122-281)||(7775019-7775181)
chr7 (97-267)||(39254077-39254249)
chr7 (103-277)||(32212872-32213049)
chr7 (100-281)||(6442162-6442347)
chr7 (100-267)||(6580016-6580188)
chr7 (120-281)||(44350800-44350965)
chr7 (98-279)||(19422838-19423019)
chr7 (104-281)||(25686833-25687019)
chr7 (118-262)||(32178823-32178966)
chr7 (140-281)||(7459382-7459525)
chr7 (131-278)||(24539123-24539273)
chr7 (173-267)||(27320446-27320540)
chr7 (100-202)||(8073367-8073471)
chr7 (131-280)||(13919810-13919962)
chr7 (104-234)||(25092708-25092840)
chr7 (131-278)||(17749724-17749874)
chr7 (132-211)||(19494409-19494488)
chr7 (141-236)||(36845567-36845661)
chr7 (131-280)||(26703438-26703590)
chr7 (120-218)||(44510999-44511099)
chr7 (119-211)||(12271002-12271095)
chr7 (131-210)||(17354598-17354677)
chr7 (101-253)||(31731283-31731439)
chr7 (135-280)||(14759677-14759825)
chr7 (121-267)||(32605350-32605497)
chr7 (135-278)||(45909489-45909636)
chr7 (146-267)||(10933979-10934100)
chr7 (136-280)||(19840883-19841030)
chr7 (101-210)||(22786149-22786260)
chr7 (140-267)||(25428492-25428620)
chr7 (117-175)||(31874047-31874105)
chr7 (97-236)||(9648916-9649059)
chr7 (136-204)||(10477272-10477340)
chr7 (200-266)||(7774944-7775009)
chr7 (202-259)||(31874117-31874174)
chr7 (132-233)||(32055607-32055708)
chr7 (160-240)||(23564076-23564156)
chr7 (206-275)||(36845495-36845566)
chr7 (117-168)||(42466239-42466290)
chr7 (209-259)||(12167315-12167365)
chr7 (176-281)||(31759838-31759943)
chr7 (99-168)||(13919896-13919967)
chr7 (132-188)||(17813868-17813923)
chr7 (131-167)||(19840912-19840948)
chr7 (98-166)||(2520628-2520698)
chr7 (100-168)||(14759759-14759829)
chr7 (202-265)||(31628100-31628163)
chr7 (121-184)||(38065415-38065478)
chr7 (190-240)||(3855851-3855901)
chr7 (97-168)||(37549618-37549691)
chr7 (215-252)||(1316387-1316424)
chr7 (131-168)||(25428506-25428543)
chr7 (131-168)||(26703467-26703504)
chr7 (127-168)||(41508388-41508429)
chr7 (153-245)||(1688035-1688127)
chr7 (228-280)||(26703565-26703617)
chr7 (195-247)||(27248480-27248532)
chr7 (139-199)||(46067976-46068036)
[»] chr4 (81 HSPs)
chr4 (104-281)||(8108957-8109138)
chr4 (103-281)||(43771126-43771308)
chr4 (131-266)||(722187-722322)
chr4 (120-266)||(754595-754743)
chr4 (100-281)||(39471154-39471339)
chr4 (96-280)||(24834571-24834759)
chr4 (99-281)||(26361306-26361484)
chr4 (100-239)||(20225383-20225522)
chr4 (100-281)||(50164392-50164577)
chr4 (117-277)||(47009203-47009367)
chr4 (98-281)||(34129398-34129585)
chr4 (120-277)||(20454557-20454716)
chr4 (100-281)||(49077246-49077431)
chr4 (139-281)||(24938413-24938557)
chr4 (98-264)||(40991606-40991774)
chr4 (118-276)||(10169648-10169808)
chr4 (134-263)||(29699522-29699650)
chr4 (98-259)||(33653511-33653674)
chr4 (144-280)||(22542424-22542562)
chr4 (117-281)||(49242184-49242352)
chr4 (117-225)||(46242000-46242108)
chr4 (139-242)||(50481584-50481687)
chr4 (151-281)||(45310946-45311078)
chr4 (139-279)||(48339340-48339482)
chr4 (139-267)||(25719126-25719255)
chr4 (133-266)||(52671862-52671995)
chr4 (126-278)||(19447156-19447311)
chr4 (149-281)||(31250880-31251015)
chr4 (128-278)||(13069968-13070120)
chr4 (127-267)||(37451027-37451165)
chr4 (147-248)||(50652369-50652470)
chr4 (132-281)||(43124512-43124663)
chr4 (98-219)||(50571859-50571982)
chr4 (94-199)||(22592295-22592402)
chr4 (132-208)||(42862494-42862570)
chr4 (142-253)||(5044568-5044679)
chr4 (132-211)||(30867002-30867081)
chr4 (139-234)||(41153245-41153340)
chr4 (136-250)||(45081773-45081887)
chr4 (159-248)||(46536295-46536384)
chr4 (101-210)||(47237812-47237923)
chr4 (131-285)||(2187807-2187963)
chr4 (123-248)||(2860899-2861024)
chr4 (134-247)||(46287474-46287587)
chr4 (129-253)||(38636365-38636489)
chr4 (131-210)||(16178614-16178692)
chr4 (128-231)||(33995985-33996088)
chr4 (131-244)||(2088701-2088815)
chr4 (149-238)||(4138913-4139002)
chr4 (97-236)||(13519941-13520084)
chr4 (148-281)||(38537511-38537649)
chr4 (98-267)||(39016658-39016830)
chr4 (131-267)||(43958181-43958314)
chr4 (198-281)||(11895134-11895220)
chr4 (137-267)||(51206079-51206210)
chr4 (148-253)||(34961699-34961801)
chr4 (136-234)||(49682838-49682936)
chr4 (118-204)||(50879471-50879559)
chr4 (192-264)||(52279276-52279348)
chr4 (165-267)||(5545642-5545745)
chr4 (152-267)||(19937186-19937301)
chr4 (153-208)||(28304089-28304144)
chr4 (142-207)||(11127794-11127859)
chr4 (131-184)||(21776942-21776995)
chr4 (131-210)||(37315593-37315669)
chr4 (131-168)||(51206159-51206196)
chr4 (131-167)||(40812067-40812103)
chr4 (140-204)||(41278695-41278759)
chr4 (131-163)||(47237768-47237800)
chr4 (221-276)||(25719231-25719286)
chr4 (99-167)||(42862414-42862484)
chr4 (148-230)||(3783412-3783494)
chr4 (143-248)||(18421864-18421967)
chr4 (145-281)||(35179653-35179792)
chr4 (97-168)||(37315676-37315749)
chr4 (142-184)||(48608121-48608163)
chr4 (131-168)||(16178699-16178736)
chr4 (134-207)||(44832496-44832569)
chr4 (117-186)||(1559812-1559883)
chr4 (238-281)||(11127856-11127900)
chr4 (99-168)||(44832579-44832650)
[»] chr2 (70 HSPs)
chr2 (100-281)||(26767759-26767944)
chr2 (96-279)||(9470074-9470260)
chr2 (100-278)||(12989188-12989370)
chr2 (104-281)||(6980118-6980299)
chr2 (103-267)||(45554567-45554725)
chr2 (96-278)||(10981511-10981695)
chr2 (118-267)||(38464178-38464329)
chr2 (131-253)||(44274264-44274386)
chr2 (100-267)||(11539420-11539592)
chr2 (100-266)||(19639090-19639258)
chr2 (100-266)||(19837683-19837851)
chr2 (139-267)||(15884471-15884595)
chr2 (100-235)||(18511255-18511392)
chr2 (100-280)||(32856134-32856322)
chr2 (104-248)||(3804585-3804732)
chr2 (100-281)||(36471836-36472021)
chr2 (122-281)||(35316399-35316560)
chr2 (95-212)||(2476528-2476645)
chr2 (104-233)||(16719478-16719609)
chr2 (100-247)||(17188064-17188211)
chr2 (103-248)||(34142172-34142319)
chr2 (131-280)||(28898035-28898187)
chr2 (131-267)||(30718341-30718476)
chr2 (136-263)||(37652263-37652390)
chr2 (131-210)||(42182919-42182998)
chr2 (170-240)||(7919311-7919381)
chr2 (148-252)||(27494480-27494584)
chr2 (100-281)||(12098866-12099050)
chr2 (131-267)||(4964686-4964823)
chr2 (144-248)||(32701513-32701617)
chr2 (148-281)||(43414402-43414536)
chr2 (100-211)||(15508911-15509024)
chr2 (100-259)||(33678138-33678298)
chr2 (131-275)||(1110228-1110375)
chr2 (96-168)||(19427360-19427432)
chr2 (104-267)||(24895280-24895444)
chr2 (148-267)||(25238291-25238411)
chr2 (196-276)||(4552843-4552925)
chr2 (180-266)||(472178-472264)
chr2 (194-252)||(14489568-14489626)
chr2 (106-184)||(31494211-31494289)
chr2 (131-184)||(1107068-1107121)
chr2 (140-259)||(4602890-4603008)
chr2 (148-253)||(24497239-24497344)
chr2 (131-207)||(37228528-37228605)
chr2 (140-267)||(6315697-6315825)
chr2 (96-168)||(20951599-20951671)
chr2 (100-210)||(31395516-31395628)
chr2 (98-168)||(37719829-37719901)
chr2 (139-184)||(41805873-41805918)
chr2 (148-248)||(30849284-30849384)
chr2 (120-248)||(25730472-25730602)
chr2 (100-276)||(2122792-2122972)
chr2 (139-281)||(19953433-19953578)
chr2 (148-253)||(38104295-38104401)
chr2 (131-184)||(10339796-10339849)
chr2 (131-168)||(28898064-28898101)
chr2 (117-209)||(4877298-4877390)
chr2 (121-168)||(21447220-21447267)
chr2 (100-184)||(41546125-41546210)
chr2 (121-259)||(37077978-37078119)
chr2 (131-168)||(4964700-4964737)
chr2 (97-163)||(27968912-27968980)
chr2 (97-163)||(28091607-28091675)
chr2 (97-163)||(28101839-28101907)
chr2 (150-242)||(44674593-44674686)
chr2 (228-280)||(10339769-10339821)
chr2 (209-253)||(17460974-17461018)
chr2 (117-174)||(25666700-25666759)
chr2 (139-167)||(42579771-42579799)
[»] chr1 (80 HSPs)
chr1 (100-259)||(41958082-41958241)
chr1 (99-281)||(6133623-6133808)
chr1 (98-267)||(2225221-2225390)
chr1 (99-281)||(10659767-10659953)
chr1 (99-281)||(8899010-8899196)
chr1 (99-281)||(28218044-28218232)
chr1 (141-280)||(30678910-30679051)
chr1 (100-279)||(26980262-26980445)
chr1 (103-267)||(19101615-19101781)
chr1 (140-263)||(33193089-33193212)
chr1 (140-267)||(41948160-41948287)
chr1 (97-267)||(25543334-25543505)
chr1 (100-281)||(11987623-11987808)
chr1 (105-259)||(35336868-35337018)
chr1 (103-244)||(3872671-3872813)
chr1 (131-259)||(29673505-29673633)
chr1 (131-267)||(32211798-32211934)
chr1 (99-280)||(931370-931555)
chr1 (103-267)||(8741237-8741405)
chr1 (99-259)||(44271914-44272076)
chr1 (117-252)||(51732293-51732428)
chr1 (103-267)||(22540368-22540530)
chr1 (131-267)||(37552965-37553099)
chr1 (139-267)||(15468258-15468386)
chr1 (131-267)||(15523240-15523372)
chr1 (131-267)||(15531234-15531366)
chr1 (100-279)||(11135736-11135920)
chr1 (131-267)||(15928585-15928719)
chr1 (93-267)||(33059907-33060082)
chr1 (100-280)||(11430438-11430622)
chr1 (131-210)||(41918025-41918104)
chr1 (124-232)||(49730885-49730995)
chr1 (139-253)||(45179274-45179388)
chr1 (100-210)||(32848654-32848766)
chr1 (131-280)||(41095607-41095759)
chr1 (139-280)||(27570263-27570406)
chr1 (146-253)||(31866361-31866467)
chr1 (131-253)||(50424893-50425016)
chr1 (139-234)||(50539162-50539257)
chr1 (106-184)||(4578674-4578752)
chr1 (139-267)||(15660931-15661058)
chr1 (118-211)||(24911480-24911573)
chr1 (132-252)||(28109899-28110019)
chr1 (144-249)||(31074759-31074863)
chr1 (160-265)||(33114030-33114135)
chr1 (139-267)||(36566934-36567056)
chr1 (100-236)||(6325858-6325993)
chr1 (191-267)||(12767342-12767418)
chr1 (121-210)||(14094072-14094163)
chr1 (131-278)||(13114670-13114820)
chr1 (131-267)||(50773124-50773261)
chr1 (128-236)||(1093118-1093226)
chr1 (101-166)||(39039470-39039537)
chr1 (132-239)||(37525560-37525667)
chr1 (137-280)||(13388335-13388483)
chr1 (99-278)||(39019571-39019746)
chr1 (129-202)||(43851114-43851187)
chr1 (96-210)||(44739111-44739227)
chr1 (136-267)||(39499430-39499563)
chr1 (149-281)||(39974198-39974326)
chr1 (148-278)||(28941869-28942000)
chr1 (101-227)||(46335092-46335223)
chr1 (182-247)||(47644331-47644396)
chr1 (149-233)||(743467-743551)
chr1 (207-280)||(16948528-16948603)
chr1 (140-208)||(24436540-24436608)
chr1 (138-184)||(9165339-9165385)
chr1 (146-240)||(15906586-15906679)
chr1 (121-184)||(18157056-18157121)
chr1 (131-168)||(11135855-11135892)
chr1 (139-270)||(31602072-31602204)
chr1 (100-168)||(13388331-13388401)
chr1 (131-166)||(50308787-50308822)
chr1 (97-156)||(11430568-11430629)
chr1 (221-267)||(21466634-21466680)
chr1 (103-165)||(21466687-21466751)
chr1 (142-211)||(29418522-29418591)
chr1 (132-184)||(5602657-5602709)
chr1 (123-155)||(37915793-37915825)
chr1 (99-168)||(41095602-41095673)
[»] scaffold0018 (1 HSPs)
scaffold0018 (136-278)||(27847-27991)
[»] scaffold0543 (1 HSPs)
scaffold0543 (131-238)||(9694-9801)
[»] scaffold0492 (1 HSPs)
scaffold0492 (131-238)||(11240-11347)
[»] scaffold0204 (1 HSPs)
scaffold0204 (139-279)||(26862-27004)
[»] scaffold0099 (2 HSPs)
scaffold0099 (146-208)||(27358-27420)
scaffold0099 (129-168)||(27430-27470)
[»] scaffold0016 (1 HSPs)
scaffold0016 (170-281)||(204706-204819)
[»] scaffold0838 (1 HSPs)
scaffold0838 (131-227)||(2252-2346)
[»] scaffold0832 (1 HSPs)
scaffold0832 (131-227)||(2283-2377)
[»] scaffold0008 (1 HSPs)
scaffold0008 (226-281)||(121199-121255)
[»] scaffold0155 (1 HSPs)
scaffold0155 (139-210)||(35632-35703)
[»] scaffold0194 (1 HSPs)
scaffold0194 (144-267)||(8425-8552)


Alignment Details
Target: chr8 (Bit Score: 360; Significance: 0; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 360; E-Value: 0
Query Start/End: Original strand, 18 - 414
Target Start/End: Complemental strand, 34861450 - 34861057
Alignment:
Q  18 caaacaacttgcatttgattgtatccatcatgacaatgaatgtaagattgaataatcttgtgggaggaacctttataaaaaagaggaatgctagcacctc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34861450 caaacaacttgcatttgattgtatccatcatgacaatgaatgtaagattgaataatcttgtgggaggaacctttataaaaaagaggaatgctagcacctc 34861351  T
Q  118 tcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccaca 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     ||||||    
T  34861350 tcacttttcaacactctctagcactcactcttttattggatgaaatcaatgtatgtcccaccactttgtgtaggttcaattttcaaagt-----cccaca 34861256  T
Q  218 ataatttaaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagcattagtctctaaaaaatgcatggagtggaaattatata 315  Q
    |||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34861255 ataatttaaaccaataagagagtgagtattagggagggtgttcaaaagagagtgttgctagcattagtctctaaaaaatgcatggagtggaaattatata 34861156  T
Q  316 ttcttgatgtcatcttaatctagaattatcccctctctctactcagtgtttatgacatttgaatatcttgcatttcattcccaaataggtaccatttga 414  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34861155 ttcttgatgtcatcttaatctagaattatcccctctctctactcagtgtttatgacatttgaatatcttgcatttcattcccaaataggtaccatttga 34861057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 98 - 270
Target Start/End: Complemental strand, 1977358 - 1977184
Alignment:
Q  98 aagaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttca 195  Q
    ||||||||||||||||   ||||||||| ||||||||||  ||||||||||||| | |||||||||||||||| |||||| |||||||||||| ||||||    
T  1977358 aagaggaatgctagcaatactcactttttaacactctctctagcactcactcttctgttggatgaaatcaatgtatgtccaaccactttgtgtgggttca 1977259  T
Q  196 attttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagagtgt 270  Q
    |||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  1977258 attttcaaagtgtagatccacaatgatttaaaccaataaaagagtgagtattagagagtgtgttcaaaagagtgt 1977184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 99 - 281
Target Start/End: Original strand, 16983390 - 16983576
Alignment:
Q  99 agaggaatgctagcacctctcacttttcaacactct--ctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaa 196  Q
    ||||||||||||||| | ||||||||||||||||||  ||||||||||||  |||||||||| |||||| |  |||||||| |||||||||  |||||||    
T  16983390 agaggaatgctagcaacactcacttttcaacactctatctagcactcactgatttattggataaaatcattttatgtcccatcactttgtgggggttcaa 16983489  T
Q  197 ttttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagcatta 281  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||    
T  16983490 ttttcaaagtgtagactcacaatgatttaaaccaataagagagtgagtattagagagagtgttcaaaagagagtgttgctagcatta 16983576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 131 - 281
Target Start/End: Complemental strand, 17499383 - 17499233
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaacca 230  Q
    |||||||||||||  ||||||||||||||||||||||  ||||||||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||    
T  17499383 ctctctagcactctatcttttattggatgaaatcaatatatgtcccaccattttgtgttggttcaattttcaaagtgtagatccacaatgatttaaacca 17499284  T
Q  231 ataagagagtgagtattagagagggtgttcaaaagagtgttgctagcatta 281  Q
    ||||||||||||||||||||||| ||  |||||||||||||||||||||||    
T  17499283 ataagagagtgagtattagagagagttgtcaaaagagtgttgctagcatta 17499233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 117 - 267
Target Start/End: Complemental strand, 24056091 - 24055939
Alignment:
Q  117 ctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagaccc 214  Q
    ||||||||||||| ||||||  ||||||| |||||||||  |||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  24056091 ctcacttttcaacgctctctttagcactcgctcttttatcagatgaaattaatgtatgtcccaccactttgtgtaagttcaattttcaaagtgtagaccc 24055992  T
Q  215 acaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagag 267  Q
    ||||| |||||||||||||||||||||||| |||||||  |||||||||||||    
T  24055991 acaattatttaaaccaataagagagtgagtgttagagaaagtgttcaaaagag 24055939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 120 - 275
Target Start/End: Complemental strand, 9952920 - 9952762
Alignment:
Q  120 acttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccaca 217  Q
    |||||||||||||||||  |||||||| | |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||    
T  9952920 acttttcaacactctctctagcactcatttttttattggatgaaatcaatgcatgtcccaccactttgtgtgagttcaattttcaaagtgtaaacccaca 9952821  T
Q  218 ataatttaaaccaataagagagtgagtattagagagggtgttcaaa-agagtgttgcta 275  Q
    || |||||||||||||||| | ||||||||  |||| ||||||||| ||||||||||||    
T  9952820 atgatttaaaccaataagataatgagtatttaagagagtgttcaaagagagtgttgcta 9952762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 104 - 259
Target Start/End: Original strand, 32072098 - 32072255
Alignment:
Q  104 aatgctagcacctctcacttttcaacactct--ctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttc 201  Q
    |||||||||| |  |||||||||||||||||  ||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||     
T  32072098 aatgctagcaacattcacttttcaacactctctctagcactcactcttttattggatgaaatgaatgtatgtcccaccactttgtgtgggttcaattttt 32072197  T
Q  202 aaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgtt 259  Q
    |||||||||||||||||| ||||||| |||||||||| || | ||||||||| |||||    
T  32072198 aaagtgtagacccacaattatttaaatcaataagagaatgggcattagagagagtgtt 32072255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 103 - 267
Target Start/End: Original strand, 8903852 - 8904018
Alignment:
Q  103 gaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaatttt 200  Q
    ||||| ||||| | |||| |||||||||||||||  || |||||||  |||||| ||||||||||||| ||||||||||||||||||| |||||||||||    
T  8903852 gaatgttagcaacactcatttttcaacactctctctagtactcacttgtttatttgatgaaatcaatgtatgtcccaccactttgtgtcggttcaatttt 8903951  T
Q  201 caaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagag 267  Q
    ||||||||||||||||||| |||||||||||||||||||| |||| |||| | | ||||||||||||    
T  8903952 caaagtgtagacccacaatgatttaaaccaataagagagtaagtaatagaaaagatgttcaaaagag 8904018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 98 - 253
Target Start/End: Original strand, 43506533 - 43506687
Alignment:
Q  98 aagaggaatgctagcacctctcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    |||||||||||||||| | ||||||||| ||||||||||| |||||||| |||||||||||  |||||||| |||| |||||||||||||| ||||| |     
T  43506533 aagaggaatgctagcaacactcacttttgaacactctctaacactcact-ttttattggatataatcaatgtatgttccaccactttgtgtgggttctac 43506631  T
Q  198 tttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagag 253  Q
    |||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  43506632 tttcaatgtgtagacccacaatgatttaagccaataagagagtgagtattagagag 43506687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 103 - 292
Target Start/End: Complemental strand, 28414049 - 28413857
Alignment:
Q  103 gaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaatttt 200  Q
    |||||||| || | ||||||||||||||||||||  ||| |||||| ||||||| ||||||||||||| |||||||||||||||||||  ||||||||||    
T  28414049 gaatgctaacaacactcacttttcaacactctctctagcgctcacttttttattcgatgaaatcaatgtatgtcccaccactttgtgtgagttcaatttt 28413950  T
Q  201 caaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagagtgt--tgctagcattagtctctaaaaa 292  Q
    |||||| |||||||| ||| |||||||||||||| ||| |||||||||| | | ||||||||||||| ||  ||||||||||| ||||| ||||    
T  28413949 caaagtatagacccataatgatttaaaccaataaaagaatgagtattag-gcgagtgttcaaaagagagtactgctagcattactctcttaaaa 28413857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 101 - 277
Target Start/End: Original strand, 5979878 - 5980057
Alignment:
Q  101 aggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaatt 198  Q
    ||||||||||||| | || |||||||||||||||||  || |  ||||||| |||||||||| ||||||| ||||||||||||||||||| |||||||||    
T  5979878 aggaatgctagcaacacttacttttcaacactctctctagtagacactcttctattggatgagatcaatgtatgtcccaccactttgtgtgggttcaatt 5979977  T
Q  199 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagc 277  Q
    ||||||||||  || ||||||  ||| |||||||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  5979978 ttcaaagtgtgaactcacaatggttt-aaccaataagagagtgagtattagagagagtgttcaaaagagagtgttgctagc 5980057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 98 - 241
Target Start/End: Original strand, 8914766 - 8914911
Alignment:
Q  98 aagaggaatgctagcacctctcacttttca--acactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttca 195  Q
    |||||||||||||||| | ||||||||| |   | ||||||| |||||||||||| ||||||| ||| ||||| ||||||||||||||||||| ||||||    
T  8914766 aagaggaatgctagcaacactcacttttgagcgctctctctaacactcactctttcattggataaaaccaatgtatgtcccaccactttgtgtgggttca 8914865  T
Q  196 attttcaaagtgtagacccacaataatttaaaccaataagagagtg 241  Q
     ||||||||||||||||||||||| |||||||||||||||||||||    
T  8914866 tttttcaaagtgtagacccacaatgatttaaaccaataagagagtg 8914911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 100 - 280
Target Start/End: Complemental strand, 35151912 - 35151728
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    ||||||| |||||| | ||||||||| |||||||| |  |||| | ||||||||||||||||||||||||| ||||||||||| ||||||  | ||||||    
T  35151912 gaggaatactagcaacactcactttttaacactctttttagcatttactcttttattggatgaaatcaatgtatgtcccaccattttgtggggattcaat 35151813  T
Q  198 tttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagcatt 280  Q
    ||| |||||||||||||||||||||| |||| ||||||| ||||| ||||| | || |||||||||  |||||||||||||||||    
T  35151812 ttttaaagtgtagacccacaataattcaaactaataagaaagtgaatattaaatagagtgttcaaaagagagtgttgctagcatt 35151728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 100 - 259
Target Start/End: Original strand, 14236335 - 14236496
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactct--ctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    |||||||| || || | ||| |||||||||||| |  ||| |||||| | |||||||||| ||||| ||   |||||||||||||||||||| |||||||    
T  14236335 gaggaatgttaacaacactctcttttcaacactttttctaccactcatttttttattggaagaaattaaaatatgtcccaccactttgtgtaagttcaat 14236434  T
Q  198 tttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgtt 259  Q
    ||| ||||||||| | |||||||||||||||||| ||||||||||||||||||||| |||||    
T  14236435 tttgaaagtgtaggcgcacaataatttaaaccaacaagagagtgagtattagagagagtgtt 14236496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 100 - 259
Target Start/End: Original strand, 41727427 - 41727588
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    ||||||||||  || | ||||||||| ||||||||||  |||| |||||||||| || ||| ||||||||| |||||||||| ||||||||||||||  |    
T  41727427 gaggaatgctgacaacactcacttttgaacactctctttagcaatcactcttttgttagataaaatcaatgtatgtcccaccgctttgtgtaggttctgt 41727526  T
Q  198 tttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgtt 259  Q
    ||| || |||||||| || ||| ||||||||||| ||||||||||||||||||||| |||||    
T  41727527 ttttaatgtgtagactcataatgatttaaaccaacaagagagtgagtattagagagagtgtt 41727588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 131 - 267
Target Start/End: Complemental strand, 6098925 - 6098791
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaacca 230  Q
    ||||||| |||||||  |||||| ||||||||| | |  || ||||||||||||||| | ||||||||||||||||||||| ||||||||||||||| ||    
T  6098925 ctctctaacactcacatttttataggatgaaattagt--atatcccaccactttgtgcatgttcaattttcaaagtgtagatccacaataatttaaatca 6098828  T
Q  231 ataagagagtgagtattagagagggtgttcaaaagag 267  Q
    |||||||||||||||||||||||  |||| |||||||    
T  6098827 ataagagagtgagtattagagagaatgtttaaaagag 6098791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 148 - 264
Target Start/End: Original strand, 13214542 - 13214658
Alignment:
Q  148 ttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtatt 247  Q
    |||||||||||| ||| |||| |||||||| || ||||||||| ||||||||||||||||||||||||||||| | ||||| |||||||||| |||||||    
T  13214542 ttttattggatggaattaatgtatgtcccatcattttgtgtagattcaattttcaaagtgtagacccacaatattataaactaataagagagcgagtatt 13214641  T
Q  248 agagagggtgttcaaaa 264  Q
    || ||| ||||||||||    
T  13214642 agggagagtgttcaaaa 13214658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 99 - 265
Target Start/End: Original strand, 6387559 - 6387726
Alignment:
Q  99 agaggaatgctagcacctctcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaatt 198  Q
    |||| |||||||||| | ||| |||||  |||||||||| |||||||||||||||||||| ||||||||| ||||||||||| ||| ||| ||||| |||    
T  6387559 agagaaatgctagcaacactctcttttggacactctctaacactcactcttttattggataaaatcaatgtatgtcccaccattttatgtgggttccatt 6387658  T
Q  199 ttcaaagtgta-gacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaag 265  Q
    | |||||| || |||||||| |  ||||| ||||||||||| ||||| |||||||| |||| ||||||    
T  6387659 tccaaagtatacgacccacattgttttaacccaataagagaatgagtgttagagagagtgtccaaaag 6387726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 131 - 280
Target Start/End: Complemental strand, 13407474 - 13407322
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgta-gacccacaataatttaaacc 229  Q
    ||||||| |||| ||| ||||||||||| ||||||||| ||||||||||| |||  || ||||| |||||||||||||| |||||||| | |||||| ||    
T  13407474 ctctctaacactaacttttttattggataaaatcaatgtatgtcccaccattttaagtgggttctattttcaaagtgtatgacccacattgatttaaccc 13407375  T
Q  230 aataagagagtgagtattagagagggtgttcaaa--agagtgttgctagcatt 280  Q
    ||| ||||| ||||| |||||||| |||||||||  |||||||||||||||||    
T  13407374 aatgagagaatgagtgttagagagagtgttcaaaagagagtgttgctagcatt 13407322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 150 - 267
Target Start/End: Complemental strand, 36804970 - 36804853
Alignment:
Q  150 ttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattag 249  Q
    |||||||||| |||||||| ||||||||||| ||||||| ||||||||||||||| | || | ||||||||||||||| |||||||||||| ||||||||    
T  36804970 ttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaattttcaaaatatacatccacaataatttaaatcaataagagagtaagtattag 36804871  T
Q  250 agagggtgttcaaaagag 267  Q
    ||||  |||| |||||||    
T  36804870 agagaatgttgaaaagag 36804853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 103 - 267
Target Start/End: Original strand, 23685131 - 23685293
Alignment:
Q  103 gaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaatttt 200  Q
    ||||||||||| |  ||||||||  |||||||||  |||||||||| ||||||||||||||||||||| ||||||||||||||| ||   |||| ||||     
T  23685131 gaatgctagcaacattcacttttgcacactctcttaagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttc 23685230  T
Q  201 caaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagag 267  Q
    |||||||||||  | |||| |||||||||||||    ||| |||||||||||| |||||||||||||    
T  23685231 caaagtgtagattcgcaatgatttaaaccaata----agttagtattagagagagtgttcaaaagag 23685293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 138 - 252
Target Start/End: Original strand, 31301152 - 31301265
Alignment:
Q  138 gcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagag 237  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||  |||| |||||||| |||||||  || |||||||||||||||||||||    
T  31301152 gcactcactcttttattggatgaaatcaatgtatgttccaccactttgtgtgagttctattttcaatgtgtaga-tcataataatttaaaccaataagag 31301250  T
Q  238 agtgagtattagaga 252  Q
    | ||| |||| ||||    
T  31301251 aatgaatatttgaga 31301265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 117 - 280
Target Start/End: Complemental strand, 11962847 - 11962681
Alignment:
Q  117 ctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagaccc 214  Q
    ||||||||||||||| ||||  |  |||||||||||||||| || ||||||| | || |||||||| ||| |||||||||||||||||||||||||| ||    
T  11962847 ctcacttttcaacacgctctttaatactcactcttttattgaataaaatcaaagtatatcccaccattttatgtaggttcaattttcaaagtgtagatcc 11962748  T
Q  215 acaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagag--tgttgctagcatt 280  Q
    | ||| |||||||||||||| | || ||||||||   || |||||||||||||  |||||||||||||    
T  11962747 a-aatgatttaaaccaataaaaaagcgagtattaacaagagtgttcaaaagaggatgttgctagcatt 11962681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 131 - 267
Target Start/End: Original strand, 35689510 - 35689647
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgt-agacccacaataatttaaacc 229  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||  |||| ||||||||||||| || |||||| |  ||| | ||    
T  35689510 ctctctagcactcacttttttattggatgaaatcaatgtatgtcccaccactttatgtgagttccattttcaaagtgtaagtcccacattgttttcaccc 35689609  T
Q  230 aataagagagtgagtattagagagggtgttcaaaagag 267  Q
    ||||| | |||||||  ||||||| ||| |||||||||    
T  35689610 aataaaaaagtgagtgctagagagagtgctcaaaagag 35689647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 132 - 237
Target Start/End: Original strand, 35797426 - 35797531
Alignment:
Q  132 tctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaa 231  Q
    ||||||||| ||||||||||||||||| ||||||||| |||| |||||||||||||   |||||||||| |||||||| | ||||||| ||||||| |||    
T  35797426 tctctagcattcactcttttattggataaaatcaatgtatgttccaccactttgtgcgagttcaatttttaaagtgtaaatccacaatgatttaaatcaa 35797525  T
Q  232 taagag 237  Q
    ||||||    
T  35797526 taagag 35797531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 7493447 - 7493351
Alignment:
Q  177 accactttgtgtagg-ttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagagtgttg 272  Q
    |||||||||||| || ||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||| || ||||||| ||||| ||||    
T  7493447 accactttgtgttgggttctattttcaaagtgtagactcacaatgatttaaaccaataagagagtgagtattagaaagagtgttcataagagagttg 7493351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 140 - 281
Target Start/End: Original strand, 9193421 - 9193564
Alignment:
Q  140 actcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagag 239  Q
    ||||| ||||||||| |||||||| | || ||||| ||| |||||||||| ||||||||||||||||||||||| ||||||||| |||||||||| | |     
T  9193421 actcattcttttatttgatgaaattagtgtatgtctcactactttgtgtaagttcaattttcaaagtgtagacctacaataattaaaaccaataaaaaaa 9193520  T
Q  240 tgagtattagagagggtgttcaaa--agagtgttgctagcatta 281  Q
    || ||||||  ||  |||| ||||  ||||||||||||||||||    
T  9193521 tgtgtattaatgatcgtgtacaaaagagagtgttgctagcatta 9193564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 117 - 219
Target Start/End: Original strand, 17716867 - 17716969
Alignment:
Q  117 ctcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccac 216  Q
    ||||||||||| |||||| || |||||||  ||||||||||||||||||||  ||||||||| | ||| ||| |||| ||||||||||||||||||||||    
T  17716867 ctcacttttcatcactctttaacactcacagttttattggatgaaatcaatatatgtcccactattttatgtgggtttaattttcaaagtgtagacccac 17716966  T
Q  217 aat 219  Q
    |||    
T  17716967 aat 17716969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 1961312 - 1961404
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatt 223  Q
    ||||||| |||| | ||||||||||||| ||||||| | | |||||||||||||| || |||||||||||||||||||||||| |||||||||    
T  1961312 ctctctaccacttaatcttttattggataaaatcaaggtacgtcccaccactttgcgtgggttcaattttcaaagtgtagaccaacaataatt 1961404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 149 - 253
Target Start/End: Complemental strand, 17741659 - 17741555
Alignment:
Q  149 tttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtatta 248  Q
    |||||||||||||||||||| ||||||||||| ||||||   ||||||||||||||||||||||| | |||  |||||||||||||   | |||||||||    
T  17741659 tttattggatgaaatcaatgtatgtcccaccattttgtgagagttcaattttcaaagtgtagacctataatggtttaaaccaataaagaaatgagtatta 17741560  T
Q  249 gagag 253  Q
    |||||    
T  17741559 gagag 17741555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 131 - 267
Target Start/End: Original strand, 45246464 - 45246600
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaacca 230  Q
    |||| ||||||||||| ||||||||||| ||||||||| ||||| ||||||||| ||   |||| |||| ||||||||||| |  |||| ||||||| ||    
T  45246464 ctctttagcactcactattttattggataaaatcaatgtatgtctcaccactttatgcgagttctatttccaaagtgtagatctgcaatgatttaaatca 45246563  T
Q  231 ataagagagtgagtattagagagggtgttcaaaagag 267  Q
    ||||||||| | ||||  ||||| || ||||||||||    
T  45246564 ataagagagggggtataggagagagtattcaaaagag 45246600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 140 - 264
Target Start/End: Original strand, 4674949 - 4675069
Alignment:
Q  140 actcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagag 239  Q
    ||||||||||||||| |||||||||||||    ||| | ||||||||||  ||| |||||||||||||||| | |||||| |||||||||||||| | |     
T  4674949 actcactcttttattagatgaaatcaatg----tcctatcactttgtgtgagtttaattttcaaagtgtagtcacacaatgatttaaaccaataaaaaaa 4675044  T
Q  240 tgagtattagagagggtgttcaaaa 264  Q
    ||| ||||||| || ||||||||||    
T  4675045 tgaatattagaaagagtgttcaaaa 4675069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 148 - 281
Target Start/End: Complemental strand, 4319866 - 4319733
Alignment:
Q  148 ttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtatt 247  Q
    ||||||| ||| ||||||||||||||| || ||||||||||   || ||||||||||||||||||| ||| ||||||||| |||||| | | ||| | ||    
T  4319866 ttttattagataaaatcaatgcatgtctcatcactttgtgtgaatttaattttcaaagtgtagacctacactaatttaaatcaataaaaaaatgaatgtt 4319767  T
Q  248 agagagggtgttcaaaagagtgttgctagcatta 281  Q
    ||||||  |||| |||| | |||||||| |||||    
T  4319766 agagagaatgttaaaaaaaatgttgctatcatta 4319733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 99 - 184
Target Start/End: Complemental strand, 45218699 - 45218614
Alignment:
Q  99 agaggaatgctagcacctctcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccacttt 184  Q
    |||||||||||||   | ||| |||||  |||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||    
T  45218699 agaggaatgctagggacactctcttttatacactctctaacactcgctcttttattggatgaaatcaatgcgtgtcccaccacttt 45218614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 144 - 259
Target Start/End: Original strand, 9453505 - 9453621
Alignment:
Q  144 actcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgta-gacccacaataatttaaaccaataagagagtga 242  Q
    ||||| ||||||||||||| |||||||||||||| ||||||  || |||||  |||||||| |||| ||||||||   |||||| ||||| |||||||||    
T  9453505 actctcttattggatgaaaccaatgcatgtcccatcactttacgtgggttcccttttcaaaatgtatgacccacatagatttaacccaattagagagtga 9453604  T
Q  243 gtattagagagggtgtt 259  Q
    |||||| |||| |||||    
T  9453605 gtattaaagagagtgtt 9453621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 103 - 210
Target Start/End: Original strand, 1423746 - 1423855
Alignment:
Q  103 gaatgctagcacctctcacttttcaacactctctagcact--cactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaatttt 200  Q
    |||| |||||| | |||||||||||||||||| ||| | |  |||||||||||| ||| ||||||||| |||||| ||||||||||    ||||||||||    
T  1423746 gaatactagcaacactcacttttcaacactctttagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 1423845  T
Q  201 caaagtgtag 210  Q
    ||||||||||    
T  1423846 caaagtgtag 1423855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 144 - 226
Target Start/End: Original strand, 9192044 - 9192126
Alignment:
Q  144 actcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaa 226  Q
    ||||||| || |||| ||||||||| || |||||||||||||||| ||||||||||| ||| ||||||| |||||| ||||||    
T  9192044 actctttcatcggataaaatcaatgtatatcccaccactttgtgtgggttcaatttttaaattgtagactcacaatgatttaa 9192126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 121 - 210
Target Start/End: Original strand, 43026311 - 43026400
Alignment:
Q  121 cttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtag 210  Q
    ||||| |||||||||||||||||||| ||||||| | | ||||||||| ||||||  ||||||| ||| ||||| |||| ||||||||||    
T  43026311 cttttaaacactctctagcactcacttttttattaggtaaaatcaatgtatgtcctgccactttatgtgggttccatttccaaagtgtag 43026400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 215 - 280
Target Start/End: Complemental strand, 5095826 - 5095759
Alignment:
Q  215 acaataatttaaaccaataagagagtgagtattagagagggtgttcaaaa--gagtgttgctagcatt 280  Q
    ||||| |||||||||||||||||||||||||||||||||| |||| ||||  ||||||| ||||||||    
T  5095826 acaatgatttaaaccaataagagagtgagtattagagaggatgtttaaaagtgagtgttcctagcatt 5095759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 234
Target Start/End: Original strand, 35819201 - 35819265
Alignment:
Q  170 atgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataa 234  Q
    ||||||||||| ||||||| || |||||||||||||| |||||||||||| |||||||| |||||    
T  35819201 atgtcccaccattttgtgtgggctcaattttcaaagtatagacccacaatgatttaaactaataa 35819265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 210
Target Start/End: Complemental strand, 7599572 - 7599493
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtag 210  Q
    |||||||||||  ||||||||||||||||||||||||| || ||||| |||||| ||| |||||  ||| ||||||||||    
T  7599572 ctctctagcacctactcttttattggatgaaatcaatgtatatcccagcactttatgtgggttccttttccaaagtgtag 7599493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 122 - 204
Target Start/End: Original strand, 10868012 - 10868094
Alignment:
Q  122 ttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaa 204  Q
    |||||||||||||||| |||| | | |||||||||||||| |||||| ||||  ||||| ||||||| | |||||||||||||    
T  10868012 ttttcaacactctctatcacttatttttttattggatgaactcaatgtatgtttcaccattttgtgtggattcaattttcaaa 10868094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 232
Target Start/End: Complemental strand, 3099783 - 3099691
Alignment:
Q  140 actcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaat 232  Q
    ||||| ||||||||| |||| |||||||| |||| |||||| |||||||  |||  |||| |||||| ||| | |||||||||||||||||||    
T  3099783 actcattcttttattagatggaatcaatgtatgttccaccattttgtgtgagttatatttccaaagtatagtctcacaataatttaaaccaat 3099691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 267
Target Start/End: Complemental strand, 26637675 - 26637556
Alignment:
Q  147 cttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtat 246  Q
    |||||||  |||||||| |||| |||| | |||| |||||||| |||| ||| ||||| ||||||  |||||||||||||| |||||| | | | | |||    
T  26637675 cttttatctgatgaaattaatgtatgttcaaccattttgtgtaagttcgattctcaaaatgtagattcacaataatttaaatcaataa-aaaataaatat 26637577  T
Q  247 tagagagggtgttcaaaagag 267  Q
    |||||||| ||||||||||||    
T  26637576 tagagaggatgttcaaaagag 26637556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 264
Target Start/End: Original strand, 34952504 - 34952606
Alignment:
Q  162 atcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttca 261  Q
    ||||||| ||||||||||| ||||||    ||||||||||||  ||||||||| |||| ||||||||||| |  | | | |||||||||||| |||||||    
T  34952504 atcaatgtatgtcccaccattttgtgggatttcaattttcaatatgtagacccgcaatgatttaaaccaagagaaaaataagtattagagagagtgttca 34952603  T
Q  262 aaa 264  Q
    |||    
T  34952604 aaa 34952606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 44742333 - 44742379
Alignment:
Q  233 aagagagtgagtattagagagggtgttcaaaagagtgttgctagcat 279  Q
    |||||||||| ||||||||||||  ||||||||||||||||||||||    
T  44742333 aagagagtgactattagagagggcattcaaaagagtgttgctagcat 44742379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 39023460 - 39023509
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccacca 180  Q
    |||||||||||||| |  |||||||||||||||||||| |||||||||||    
T  39023460 ctctctagcactcatttatttattggatgaaatcaatgtatgtcccacca 39023509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 210
Target Start/End: Original strand, 1205829 - 1205936
Alignment:
Q  105 atgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttca 202  Q
    ||||||||| | ||| ||||| | ||||||||  |||||||||||||||||| | | |||| |||| ||||| ||||||||| | | ||||| |||| ||    
T  1205829 atgctagcaacactctcttttgagcactctctttagcactcactcttttattaggtaaaattaatgtatgtctcaccactttatatgggttctatttcca 1205928  T
Q  203 aagtgtag 210  Q
    ||||||||    
T  1205929 aagtgtag 1205936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 209
Target Start/End: Original strand, 31711638 - 31711730
Alignment:
Q  117 ctcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgta 209  Q
    ||||||||| ||  || ||||||||||||||||||||| |||| |||  ||||||||| || ||||||||||  |||| ||||  ||||||||    
T  31711638 ctcacttttaaattctttctagcactcactcttttatttgatggaattcatgcatgtctcatcactttgtgtgagttctatttctaaagtgta 31711730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 266
Target Start/End: Original strand, 5727346 - 5727397
Alignment:
Q  215 acaataatttaaaccaataagagagtgagtattagagagggtgttcaaaaga 266  Q
    ||||| |||||||||||||| | |||||||| ||||||||||||| ||||||    
T  5727346 acaatgatttaaaccaataaaaaagtgagtactagagagggtgtttaaaaga 5727397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 28212036 - 28211961
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagt 206  Q
    ||||||||||||||||  |||||||| ||||||||||  ||||| ||||| ||| ||| ||||| ||||| |||||    
T  28212036 ctctctagcactcacttatttattgggtgaaatcaatatatgtctcaccattttatgtgggttccatttttaaagt 28211961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 259
Target Start/End: Original strand, 33417730 - 33417841
Alignment:
Q  149 tttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgta-gacccacaataatttaaaccaataagagagtgagtatt 247  Q
    |||||| | |||||||||||||||| |||||||||| ||| ||||  |||| ||||||||| | || ||| |||||| |  |||||| |||||||||  |    
T  33417730 tttattaggtgaaatcaatgcatgttccaccactttatgtgggtttcatttccaaagtgtaggtcctacattaatttcactcaataaaagagtgagtgct 33417829  T
Q  248 agagagggtgtt 259  Q
    |||||| |||||    
T  33417830 agagagagtgtt 33417841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 168
Target Start/End: Complemental strand, 13856545 - 13856508
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatg 168  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  13856545 ctctctaacacccactcttttattggatgaaatcaatg 13856508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 184
Target Start/End: Complemental strand, 16314417 - 16314372
Alignment:
Q  139 cactcactcttttattggatgaaatcaatgcatgtcccaccacttt 184  Q
    |||||||||||||||||||| |||| |||| |||| ||||||||||    
T  16314417 cactcactcttttattggataaaattaatgtatgttccaccacttt 16314372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 24184409 - 24184450
Alignment:
Q  143 cactcttttattggatgaaatcaatgcatgtcccaccacttt 184  Q
    ||||||||||||||| ||||| ||||||||||||| ||||||    
T  24184409 cactcttttattggaagaaattaatgcatgtcccatcacttt 24184450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 168
Target Start/End: Original strand, 34303465 - 34303502
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatg 168  Q
    |||||||||||| ||||||||||||| |||||||||||    
T  34303465 ctctctagcactaactcttttattgggtgaaatcaatg 34303502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 259
Target Start/End: Original strand, 36629694 - 36629816
Alignment:
Q  136 tagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaat-aa 234  Q
    ||||||| ||||||||||| |||||||| |||| ||||   | |||  ||||| ||||| |||| ||| |||||||||| |||| || ||||||||| ||    
T  36629694 tagcacttactcttttattagatgaaataaatgtatgtattatcac--tgtgtgggttctatttccaatgtgtagacccgcaatgatctaaaccaataaa 36629791  T
Q  235 gagagtgagtattagagagggtgtt 259  Q
     | | |||||||||||||| |||||    
T  36629792 aaaaatgagtattagagagagtgtt 36629816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 279
Target Start/End: Original strand, 8671070 - 8671129
Alignment:
Q  222 tttaaaccaataagagagtgagtattagagagggtgttcaaaagag--tgttgctagcat 279  Q
    ||||||| ||||| | |||||||||||||||| | |||||||||||  ||||||||||||    
T  8671070 tttaaactaataaaatagtgagtattagagagagcgttcaaaagagaatgttgctagcat 8671129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 28700625 - 28700577
Alignment:
Q  211 acccacaataatttaaaccaataagagagtgagtattagagagggtgtt 259  Q
    |||||||  ||||||| ||||||||||||||||| |||||||| |||||    
T  28700625 acccacataaatttaacccaataagagagtgagtgttagagagagtgtt 28700577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 167
Target Start/End: Complemental strand, 31691692 - 31691625
Alignment:
Q  102 ggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaat 167  Q
    |||||||||||| | ||||||||| || |||||||  | ||||||||||||||||| | |||||||||    
T  31691692 ggaatgctagcaacactcacttttgaaaactctctttaacactcactcttttattgaacgaaatcaat 31691625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 128; Significance: 5e-66; HSPs: 77)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 100 - 267
Target Start/End: Original strand, 28529250 - 28529417
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    |||||||||||||| | ||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||| ||||  ||||||||    
T  28529250 gaggaatgctagcaacactcacttttcaacactctctctagcactcactcttttattggatgaaatcaatgtatgtcccaccactgtgtg--ggttcaat 28529347  T
Q  198 tttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagag 267  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  28529348 tttcaaagtgtagacccacaatgatttaaaccaataagagagtgagtattagagagggtgttcaaaagag 28529417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 100 - 287
Target Start/End: Complemental strand, 37776886 - 37776695
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    |||||||||||||| | |||||||||||||||| |||  |||||||||||||||||| ||||||||||||| |||||| |||||||||||| ||||||||    
T  37776886 gaggaatgctagcaacactcacttttcaacactttctccagcactcactcttttattagatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 37776787  T
Q  198 tttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttc--aaaagagtgttgctagcattagtctct 287  Q
    |||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||    
T  37776786 tttcaaagtgtagacctacaatgatttaaaccactaagagagtgagtattagagagggtgttcataaaagagtgttgctagcattactctct 37776695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 100 - 280
Target Start/End: Complemental strand, 41452078 - 41451894
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacac--tctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    ||||||| |||||| | |||||||||||||||  ||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||    
T  41452078 gaggaatactagcaacactcacttttcaacacaatctctagtactcactcttttattggatgaaatcaaagtatgtcccaccactttgtgtgggttcaat 41451979  T
Q  198 tttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagcatt 280  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||    
T  41451978 tttcaaagagtagacccacaatgatttaaaccaataagagagtgagtattagagagagtgttcaaaagagagtgttgctagcatt 41451894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 97 - 280
Target Start/End: Original strand, 24734699 - 24734886
Alignment:
Q  97 aaagaggaatgctagcacctctcacttttcaacac--tctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttc 194  Q
    |||||||||| |||||| | |||||||||||||||  ||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||| |||||    
T  24734699 aaagaggaatactagcaacactcacttttcaacacaatctctagtactcactcttttattggatgaaatcaaagtatgtcccaccactttgtgtgggttc 24734798  T
Q  195 aattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagcatt 280  Q
    ||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||    
T  24734799 aattttcaaagagtaggcccacaatgatttaaaccaataagagagtgagtattagagagagtgttcaaaagagagtgttgctagcatt 24734886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 98 - 267
Target Start/End: Original strand, 46160944 - 46161113
Alignment:
Q  98 aagaggaatgctagcacctctcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    |||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||| ||    
T  46160944 aagaggaatgctagcaacactcacttttgaacactctctagcactcactcttttattggatgaaatcaatacatgtccgaccactttgtgttggttctat 46161043  T
Q  198 tttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagag 267  Q
    || ||||||||||| ||| ||| ||||||||||||||||||||||||||||||||| |||| ||| ||||    
T  46161044 ttccaaagtgtagatccataatgatttaaaccaataagagagtgagtattagagagagtgtccaagagag 46161113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 100 - 278
Target Start/End: Original strand, 46450064 - 46450244
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccac-tttgtgtaggttcaatt 198  Q
    |||||||||||||| | ||||||||| |||||||||||||||||||||||||||| |||| |||||||| |||||||||||| ||||||| ||||| |||    
T  46450064 gaggaatgctagcaacactcacttttgaacactctctagcactcactcttttattagatggaatcaatgtatgtcccaccacttttgtgtgggttctatt 46450163  T
Q  199 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaa-agagtgttgctagca 278  Q
    | ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||| |||| ||||||||||    
T  46450164 tgcaaagtgtagacccacaatgatttaaaccaataagagagtgagtattagagagagtgttaaaatagagcgttgctagca 46450244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 139 - 278
Target Start/End: Complemental strand, 18427292 - 18427153
Alignment:
Q  139 cactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagaga 238  Q
    ||||||||| |||||||||||||||||||| ||||||||||| ||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  18427292 cactcactcatttattggatgaaatcaatgtatgtcccaccattttgtgtgggttctattttcaaagtgtagacccacaatgatttaaaccaataagaga 18427193  T
Q  239 gtgagtattagagagggtgttcaaaagagtgttgctagca 278  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  18427192 gtgagtattagagagggtgttcaagagagtgttgctagca 18427153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 99 - 267
Target Start/End: Complemental strand, 20493629 - 20493459
Alignment:
Q  99 agaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaa 196  Q
    ||||||||||||||| | ||||||||||||||||||||  | ||||||||| |||||||||||||||||||| |||||| |||||||||||  |||||||    
T  20493629 agaggaatgctagcaacactcacttttcaacactctctctaacactcactcatttattggatgaaatcaatgtatgtcctaccactttgtgggggttcaa 20493530  T
Q  197 ttttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagag 267  Q
    | ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||    
T  20493529 tattcaaagtgtagacccacaatgatttaaaccaataagagagtgagtaatagagagagtgttcaaaagag 20493459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 98 - 281
Target Start/End: Complemental strand, 52124141 - 52123954
Alignment:
Q  98 aagaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttca 195  Q
    |||||||||||||||| | ||||||||| ||| ||||||  ||||||||||  ||| ||||||||||| |||| ||||||||| | ||||||  ||||||    
T  52124141 aagaggaatgctagcaacactcactttttaacgctctctctagcactcacttatttgttggatgaaattaatgtatgtcccactattttgtgggggttca 52124042  T
Q  196 attttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagcatta 281  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||  ||||||||||||||||||    
T  52124041 attttcaaagtgtagacccacaatgatttaaaccaataagaaagtgagtattagagagagtgttcaaaagagagtgttgctagcatta 52123954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 100 - 281
Target Start/End: Complemental strand, 5452243 - 5452060
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    |||||||||||||| | ||||||||||||||||||||  | || ||||||||||||||||||||||||||| || |||||||||||||||| | ||||||    
T  5452243 gaggaatgctagcaacactcacttttcaacactctctttaacattcactcttttattggatgaaatcaatgtatttcccaccactttgtgtggattcaat 5452144  T
Q  198 tttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagcatta 281  Q
    |||| |||||||||||  |||  ||||||| ||||||||||| ||||||| ||||| |||||||||  ||||||||||||||||||    
T  5452143 tttctaagtgtagacc--caaggatttaaatcaataagagagcgagtattggagagagtgttcaaaagagagtgttgctagcatta 5452060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 100 - 278
Target Start/End: Original strand, 27243042 - 27243225
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    |||| ||||||||| | ||| ||||| ||||||||||  | |||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||| ||    
T  27243042 gagggatgctagcaacactctcttttgaacactctctctaacactcactcttttattggataaaatcaatgcatgtcccaccactttatgtgggttccat 27243141  T
Q  198 tttcaaagtgta-gacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagca 278  Q
    || ||||||||| |||||||| | |||||| ||||| ||||||||||||||||| || |||||||||  |||||||||||||||    
T  27243142 ttccaaagtgtatgacccacattgatttaacccaatgagagagtgagtattagaaagagtgttcaaaagagagtgttgctagca 27243225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 103 - 267
Target Start/End: Original strand, 20791296 - 20791462
Alignment:
Q  103 gaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaatttt 200  Q
    ||||||||||| |  ||||||||  |||||||||  |||||||||| ||||||||||||||||||||| ||||||||||||||| ||   |||| ||||     
T  20791296 gaatgctagcaacgttcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttc 20791395  T
Q  201 caaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagag 267  Q
    ||||||||||| || |||| |||||||||||||||| |||||||||||||||| |||||||||||||    
T  20791396 caaagtgtagatccgcaatgatttaaaccaataagaaagtgagtattagagagagtgttcaaaagag 20791462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 100 - 259
Target Start/End: Complemental strand, 55452196 - 55452037
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattt 199  Q
    |||||||| ||||| | ||||||||| |||||||||| | |||||||||||||||||||| |||  ||| ||||||||||||||||||| ||||| ||||    
T  55452196 gaggaatgttagcaacactcacttttgaacactctctggtactcactcttttattggatggaatacatgtatgtcccaccactttgtgtgggttctattt 55452097  T
Q  200 tcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgtt 259  Q
     |||||||||||| || ||| |||||||||||| | |||||||||||||||||| |||||    
T  55452096 ccaaagtgtagactcataatgatttaaaccaatgaaagagtgagtattagagagagtgtt 55452037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 117 - 264
Target Start/End: Complemental strand, 8825145 - 8824996
Alignment:
Q  117 ctcacttttcaaca--ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagaccc 214  Q
    |||||||||||||   |||||||| |||||| |||||||| ||||||||||||  ||||||||||| ||| ||  ||||||||||||||||| || || |    
T  8825145 ctcacttttcaaccatctctctagtactcacccttttattagatgaaatcaatatatgtcccaccattttatgcgggttcaattttcaaagtctacactc 8825046  T
Q  215 acaataatttaaaccaataagagagtgagtattagagagggtgttcaaaa 264  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  8825045 acaataatttaaaccaataagagagtgagtattaaagagagtgttcaaaa 8824996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 118 - 232
Target Start/End: Complemental strand, 26310611 - 26310495
Alignment:
Q  118 tcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagaccca 215  Q
    |||||||||||||||||||  |||||| ||||||||||||||||||||||||| ||||||||||| ||| ||| ||||||||||||||||||||||||||    
T  26310611 tcacttttcaacactctctctagcacttactcttttattggatgaaatcaatgtatgtcccaccattttttgttggttcaattttcaaagtgtagaccca 26310512  T
Q  216 caataatttaaaccaat 232  Q
     ||| ||||||||||||    
T  26310511 taatgatttaaaccaat 26310495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 131 - 278
Target Start/End: Original strand, 14236049 - 14236198
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaacca 230  Q
    |||| ||||||||||| ||||||||||||||||||||  ||||||||||||||| ||   |||| |||| ||||||||||| ||||||||||||| ||||    
T  14236049 ctctttagcactcactattttattggatgaaatcaatatatgtcccaccactttatgcgagttctatttccaaagtgtagatccacaataatttagacca 14236148  T
Q  231 ataagagagtgagtattagagagggtgttcaaa--agagtgttgctagca 278  Q
    |||| | ||||||||||||| || |||||||||  |||||||||||||||    
T  14236149 ataaaaaagtgagtattagaaagagtgttcaaaacagagtgttgctagca 14236198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 98 - 278
Target Start/End: Original strand, 46575943 - 46576126
Alignment:
Q  98 aagaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttca 195  Q
    ||||||||||||| || | ||| || |||||||||||||  | |||||||||| ||||||| ||||| ||||| ||||||||||||||| ||| |||||     
T  46575943 aagaggaatgctatcaacactctctcttcaacactctctcaaacactcactctcttattggctgaaaccaatgtatgtcccaccactttttgtgggttcc 46576042  T
Q  196 attttcaaagtgta-gacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagagtgttgctagca 278  Q
    ||||||||| |||| | |||||| | |||||| || || ||||||||||||||| |||| ||||| ||||||||||||||||||    
T  46576043 attttcaaaatgtacgccccacattgatttaaccctattagagagtgagtattaaagagagtgttgaaaagagtgttgctagca 46576126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 104 - 259
Target Start/End: Original strand, 41387564 - 41387719
Alignment:
Q  104 aatgctagcacctctcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaa 203  Q
    |||||||||| | |||| | |||||||||||||||||||||||| |||||||||| ||||| ||| || || ||| | ||||||| |||| |||||||||    
T  41387564 aatgctagcaacactcattattcaacactctctagcactcactcatttattggattaaatcgatgtatatcacactattttgtgtgggtttaattttcaa 41387663  T
Q  204 agtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgtt 259  Q
    |||| ||||||||||| |||||| | ||||||||| |||||||| ||||| |||||    
T  41387664 agtgcagacccacaatgatttaatcaaataagagattgagtattggagagagtgtt 41387719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 145 - 267
Target Start/End: Complemental strand, 29588869 - 29588747
Alignment:
Q  145 ctcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagt 244  Q
    |||||||||||||| ||||||||| ||||||   |||||| |||  ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  29588869 ctcttttattggataaaatcaatgtatgtcctttcactttatgtgagttcaattttcaaagtgtagacccacaatgatttaaatcaataagagagtgagt 29588770  T
Q  245 attagagagggtgttcaaaagag 267  Q
     ||| |||| |||||||||||||    
T  29588769 gttatagagagtgttcaaaagag 29588747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 117 - 266
Target Start/End: Complemental strand, 50156824 - 50156675
Alignment:
Q  117 ctcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccac 216  Q
    ||||||||||||||| ||||   ||| |||  ||||||| ||||||| |||| |||| |||| |||||| |  ||||||||||| |||||||||||||||    
T  50156824 ctcacttttcaacacactctgatacttacttatttattgaatgaaattaatgtatgttccacaactttgcgggggttcaattttaaaagtgtagacccac 50156725  T
Q  217 aataatttaaaccaataagagagtgagtattagagagggtgttcaaaaga 266  Q
    ||| |||||||||||||||||||||||||||| | || ||||||||||||    
T  50156724 aatgatttaaaccaataagagagtgagtattacaaagagtgttcaaaaga 50156675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 117 - 253
Target Start/End: Complemental strand, 10948726 - 10948588
Alignment:
Q  117 ctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagaccc 214  Q
    |||||||||||||||| |||  ||||||||||  ||||||||| || || |||| |||| ||||||||||||||  |||||||||| |||||||| ||||    
T  10948726 ctcacttttcaacactttctcaagcactcacttctttattggacgatattaatgtatgttccaccactttgtgtttgttcaatttttaaagtgtaaaccc 10948627  T
Q  215 acaataatttaaaccaataagagagtgagtattagagag 253  Q
    ||||| |||||||||||||| ||||||||||||| ||||    
T  10948626 acaatgatttaaaccaataaaagagtgagtattaaagag 10948588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 100 - 267
Target Start/End: Original strand, 29755497 - 29755666
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    |||||||||||||| | |||||||||||||| |||||  | ||| ||||||||||| | ||  |||||||  ||||  ||| ||||||||| ||||||||    
T  29755497 gaggaatgctagcaacactcacttttcaacattctctttaacacccactcttttatcgaatagaatcaatatatgtttcactactttgtgtgggttcaat 29755596  T
Q  198 tttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagag 267  Q
    |||||||||||||| | ||||| ||||||||||||||||| ||  ||||||||| | |||||||||||||    
T  29755597 tttcaaagtgtagatcaacaatgatttaaaccaataagagggtaggtattagagggagtgttcaaaagag 29755666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 132 - 280
Target Start/End: Original strand, 38414678 - 38414826
Alignment:
Q  132 tctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaa 231  Q
    |||||| || ||||||| | ||| ||| | ||||||| ||||||||||| ||||||| |||| |||||| |||||||||| |||| ||||||||||||||    
T  38414678 tctctaacagtcactctctcattagataagatcaatgtatgtcccaccattttgtgtgggtttaatttttaaagtgtagatccacgataatttaaaccaa 38414777  T
Q  232 taagagagtgagtattagagagggtgttcaaaagagtgttgctagcatt 280  Q
    ||||||||||||| ||| ||||  || ||||||||||| || |||||||    
T  38414778 taagagagtgagtgttaaagagaatgctcaaaagagtgctgttagcatt 38414826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 99 - 267
Target Start/End: Original strand, 48351432 - 48351602
Alignment:
Q  99 agaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaa 196  Q
    |||||||||||| || | |||| |||| ||||||||||  |  || |||||||||||||||| ||||||||  ||||| ||| ||||||||| |||||||    
T  48351432 agaggaatgctaacaacactcagtttttaacactctctttaagacacactcttttattggataaaatcaatatatgtctcactactttgtgtgggttcaa 48351531  T
Q  197 ttttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagag 267  Q
    ||||||||||||| | ||| ||| ||||||| ||||||||||  ||||||||||||   ||||||||||||    
T  48351532 ttttcaaagtgtatatccataatgatttaaatcaataagagaaagagtattagagaaaatgttcaaaagag 48351602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 117 - 259
Target Start/End: Original strand, 138779 - 138921
Alignment:
Q  117 ctcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccac 216  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||||| ||||| ||||| ||||| |   ||||||||| ||| |||| ||  ||    
T  138779 ctcagttttcaagactctctagcactcactcttttattgaatgaaatcaatgtatgtctcaccattttgtatgtattcaatttttaaaatgtaaacttac 138878  T
Q  217 aataatttaaaccaataagagagtgagtattagagagggtgtt 259  Q
    ||| ||||||| |||||| ||||| ||||||| ||||||||||    
T  138879 aatgatttaaatcaataaaagagtaagtattaaagagggtgtt 138921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 131 - 280
Target Start/End: Complemental strand, 41707589 - 41707440
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaacca 230  Q
    ||||||| |||||||||| | ||||||| ||||||||| ||||  || |||||||||| ||||||||||| ||||| ||||||||||||||||||||||     
T  41707589 ctctctaacactcactctctcattggataaaatcaatgtatgtttcatcactttgtgtgggttcaatttttaaagtatagacccacaataatttaaacc- 41707491  T
Q  231 ataagagagtgagtattagagagggtgttcaaaa-gagtgttgctagcatt 280  Q
    |||||| | | ||| ||| |||| ||||||||||  |||||||||||||||    
T  41707490 ataagaaaataagtgttaaagagagtgttcaaaataagtgttgctagcatt 41707440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 149 - 249
Target Start/End: Complemental strand, 19345132 - 19345032
Alignment:
Q  149 tttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtatta 248  Q
    |||||||||||||||||||| |||||||||||||||||   ||||||||||||||| ||||||| |||||| |||||||||||||| ||| | |||||||    
T  19345132 tttattggatgaaatcaatgtatgtcccaccactttgttggggttcaattttcaaattgtagactcacaatgatttaaaccaataaaagaataagtatta 19345033  T
Q  249 g 249  Q
    |    
T  19345032 g 19345032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 149 - 264
Target Start/End: Complemental strand, 2419596 - 2419481
Alignment:
Q  149 tttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtatta 248  Q
    ||||||||||| ||||||||||||||| |||||||||  |  |||| |||| ||| ||||||||||||||| |||||||||||||||| |||||||||||    
T  2419596 tttattggatggaatcaatgcatgtcctaccactttgcatgagttctatttccaatgtgtagacccacaatgatttaaaccaataagaaagtgagtatta 2419497  T
Q  249 gagagggtgttcaaaa 264  Q
     |||  ||||||||||    
T  2419496 aagaaagtgttcaaaa 2419481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 100 - 267
Target Start/End: Original strand, 2008992 - 2009160
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    |||||||||||||| | ||||||||| ||| ||||||  |   |||||||||||||  |||||||| |||| |||||| |||||||| ||||| |||| |    
T  2008992 gaggaatgctagcaacgctcactttttaaccctctctttattgctcactcttttatcagatgaaattaatgtatgtcc-accactttatgtagtttcagt 2009090  T
Q  198 tttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagag 267  Q
    ||| ||||||||||| |||||||||||||| |||||| | | ||| ||||||||||| |||| |||||||    
T  2009091 ttttaaagtgtagactcacaataatttaaatcaataaaaaaatgaatattagagaggatgtttaaaagag 2009160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 100 - 266
Target Start/End: Complemental strand, 45515678 - 45515512
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    |||||||| || || | ||||||||| ||||||||||  | |||||||| ||||||||||||||||||||| || ||||| |||   ||||  |||||||    
T  45515678 gaggaatgttaacaacgctcactttttaacactctctccaacactcactattttattggatgaaatcaatgtatatcccatcacagagtgtgagttcaat 45515579  T
Q  198 tttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaaga 266  Q
    |||||||||||||||| |  || |||| ||||||||||||||||| ||||||||||| | |||||||||    
T  45515578 tttcaaagtgtagaccta-tatgattt-aaccaataagagagtgaatattagagaggttattcaaaaga 45515512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 117 - 279
Target Start/End: Complemental strand, 15790535 - 15790370
Alignment:
Q  117 ctcacttttcaacactct--ctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagaccc 214  Q
    |||||||||||||||| |  ||| |||| |||  |||||||||| ||||||||| ||||| ||||| ||| ||  ||  ||||||||||||||||| ||     
T  15790535 ctcacttttcaacactttttctaacacttacttatttattggataaaatcaatgtatgtctcaccattttatggtgggacaattttcaaagtgtaggcc- 15790437  T
Q  215 acaataatttaaaccaataagagagtgagtattagagagggtgttc--aaaagagtgttgctagcat 279  Q
    | ||| |||||||||||||||||||||||||||||||||  | |||  |||||||||||||||||||    
T  15790436 ataatgatttaaaccaataagagagtgagtattagagagattattcaaaaaagagtgttgctagcat 15790370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 22604598 - 22604710
Alignment:
Q  139 cactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagaga 238  Q
    ||||||||| |||||||||| |||| |||| ||||||||||| ||||||   |||||||||||||| ||||||| |||||| ||||||||  ||||||||    
T  22604598 cactcactcatttattggataaaattaatgtatgtcccaccattttgtgggagttcaattttcaaaatgtagactcacaatgatttaaacttataagaga 22604697  T
Q  239 gtgagtattagag 251  Q
    ||||| |||||||    
T  22604698 gtgagaattagag 22604710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 117 - 267
Target Start/End: Complemental strand, 40702286 - 40702136
Alignment:
Q  117 ctcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccac 216  Q
    |||||||||||||||||||||||||| ||||||||||  |||||||| |||| |||  ||| |||||| ||| ||||||||||| ||||| | || ||||    
T  40702286 ctcacttttcaacactctctagcacttactcttttatatgatgaaattaatgtatgatccatcactttatgtgggttcaatttttaaagttttgatccac 40702187  T
Q  217 aataatttaaaccaataagagagtgagtattagagagggtgttcaaaagag 267  Q
    | |||||||||||| ||| |   ||| |||||||||  || ||||||||||    
T  40702186 agtaatttaaaccattaaaaatttgaatattagagaatgtattcaaaagag 40702136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 131 - 280
Target Start/End: Complemental strand, 37600280 - 37600128
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagaccc-acaataatttaaacc 229  Q
    ||||||||||| |||||||||||||| ||||||||||| ||||||||||||||| ||| ||||| ||||  |||||||||  || ||| | | || ||||    
T  37600280 ctctctagcacccactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtaggtcctacattgaattcaacc 37600181  T
Q  230 aataagagagtgagtattagagagggtgttcaaaagag--tgttgctagcatt 280  Q
    ||||| |||||| ||  ||||||| ||| |||||||||  |||||||||||||    
T  37600180 aataaaagagtgggtgctagagagagtgctcaaaagagagtgttgctagcatt 37600128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 131 - 210
Target Start/End: Complemental strand, 54141043 - 54140964
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtag 210  Q
    ||||||||||||||||| |||||||| ||||||||||| |||||||||||||||  || ||||| |||||||||||||||    
T  54141043 ctctctagcactcactcatttattgggtgaaatcaatgtatgtcccaccactttacgtgggttccattttcaaagtgtag 54140964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 752461 - 752539
Alignment:
Q  170 atgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtatta 248  Q
    ||||||||||||||||||| ||||| ||||  |||||||||||||||||| |||||||| ||||||||| |||||||||    
T  752461 atgtcccaccactttgtgtgggttctatttctaaagtgtagacccacaatgatttaaactaataagagaatgagtatta 752539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 103 - 209
Target Start/End: Original strand, 30624633 - 30624739
Alignment:
Q  103 gaatgctagcacctctcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttca 202  Q
    ||||||||||| | ||||||||| | ||||||||| ||||||||||||||||| || |||| |||| ||||  |||||||||||||  ||||||||||||    
T  30624633 gaatgctagcaacactcacttttgagcactctctaacactcactcttttattgaataaaattaatgtatgtttcaccactttgtgtgagttcaattttca 30624732  T
Q  203 aagtgta 209  Q
    || ||||    
T  30624733 aaatgta 30624739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 98 - 278
Target Start/End: Original strand, 13809077 - 13809261
Alignment:
Q  98 aagaggaatgctagcacctctcacttttcaacactctctagcact-cactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaa 196  Q
    ||||| |||||||||| | ||| |||||  |||||||||   ||| |||||||||||||||| ||||||||| ||||||||||| ||| ||| ||||| |    
T  13809077 aagagaaatgctagcaacactctcttttacacactctctctaacttcactcttttattggataaaatcaatgtatgtcccaccattttatgtgggttcca 13809176  T
Q  197 ttttcaaagtgta-gacccacaataatttaaaccaataagagagtgagtattagagagggtgttca--aaagagtgttgctagca 278  Q
    ||| |||||| || |||||||| |  ||||| ||||||||||| ||| | |||||||  |||| ||  |||||||||||||||||    
T  13809177 tttccaaagtatatgacccacattgttttaacccaataagagaatgaatgttagagaaagtgtccaagaaagagtgttgctagca 13809261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 120 - 253
Target Start/End: Original strand, 37285302 - 37285435
Alignment:
Q  120 acttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaat 219  Q
    |||||| |||||| | ||||||||||| |||| || ||||||||  ||| ||||| ||||| ||| | | ||||  ||||| |||||| |||||||||||    
T  37285302 actttttaacactatttagcactcacttttttgttagatgaaattcatgtatgtcgcaccattttttatgggttttatttttaaagtgcagacccacaat 37285401  T
Q  220 aatttaaaccaataagagagtgagtattagagag 253  Q
    ||||||||||||||| | ||| ||||||||||||    
T  37285402 aatttaaaccaataaaaaagtaagtattagagag 37285435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 131 - 281
Target Start/End: Original strand, 43016441 - 43016595
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcat--gtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaac 228  Q
    ||||||| || ||||| |||||||  |||||||||||| ||  ||| ||| ||| |||||  |||||||||| ||||| ||||  || ||| |||||||     
T  43016441 ctctctaacattcacttttttattaaatgaaatcaatgtatatgtcgcactactctgtgttagttcaatttttaaagtatagattcataatgatttaaat 43016540  T
Q  229 caataagagagtgagtattagagagggtgttcaaa--agagtgttgctagcatta 281  Q
    |||||||||||||||||||| || |||||||||||  |||||||| |||||||||    
T  43016541 caataagagagtgagtattacagtgggtgttcaaaatagagtgtttctagcatta 43016595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 46237196 - 46237128
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattt 199  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||| ||||| ||||    
T  46237196 ctctctagcaatcactcttttattggatgaaatcaatgtatgtcccaccactttatgtgggttccattt 46237128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 50661672 - 50661568
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgta-gacccacaataatttaaacc 229  Q
    ||||||| |||| ||||||||||| ||| ||||||||||||||||||||||||| ||| ||||| |||| |||| |||| |||||||| | |||||| ||    
T  50661672 ctctctaacacttactcttttattagataaaatcaatgcatgtcccaccactttatgtgggttccatttccaaaatgtatgacccacattgatttaaccc 50661573  T
Q  230 aataa 234  Q
    |||||    
T  50661572 aataa 50661568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 104 - 248
Target Start/End: Complemental strand, 40716041 - 40715895
Alignment:
Q  104 aatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttc 201  Q
    |||| ||||| | ||||||||||||||||||||  |||||||||||||||||  | |||||| |||| ||| | || |||||||||| |||||||||||     
T  40716041 aatgttagcaacactcacttttcaacactctctctagcactcactcttttatatggtgaaattaatgtatgactcatcactttgtgtgggttcaattttt 40715942  T
Q  202 aaagtgtagacccacaataatttaaaccaataagagagtgagtatta 248  Q
    ||| ||| |||  ||||| |||||||| |||| |||| ||| |||||    
T  40715941 aaaatgttgacatacaatgatttaaactaataggagattgaatatta 40715895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 127 - 267
Target Start/End: Original strand, 357786 - 357925
Alignment:
Q  127 aacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtag-acccacaataattta 225  Q
    |||||||||||||||||||||||||||||   |||||||||| ||| | ||||||||| ||| ||||| |||| |||||||||| ||| ||| | ||||     
T  357786 aacactctctagcactcactcttttattgagggaaatcaatgtatgcctcaccactttatgtgggttccatttccaaagtgtagtacctacattgatttc 357885  T
Q  226 aaccaataagagagtgagtattagagagggtgttcaaaagag 267  Q
    | ||||||| | |||||||  ||||||  |||||||||||||    
T  357886 atccaataaaaaagtgagtgatagaga--gtgttcaaaagag 357925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 742025 - 742103
Alignment:
Q  170 atgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtatta 248  Q
    ||||||||||||||||||| | ||| ||||  |||||||||||||||||| |||||||| ||||||||| |||||||||    
T  742025 atgtcccaccactttgtgtggattctatttctaaagtgtagacccacaatgatttaaactaataagagaatgagtatta 742103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 190 - 264
Target Start/End: Complemental strand, 29388685 - 29388611
Alignment:
Q  190 ggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaa 264  Q
    ||||||||||||||||||||||| |||||| ||||||  ||||||||||||| || |||||||| ||||||||||    
T  29388685 ggttcaattttcaaagtgtagactcacaatgatttaagtcaataagagagtgggtgttagagagagtgttcaaaa 29388611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 132 - 210
Target Start/End: Complemental strand, 43657145 - 43657067
Alignment:
Q  132 tctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtag 210  Q
    ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| |||  |||| |||| ||||||||||    
T  43657145 tctctagcactcactattttatttgatgaaatcaatgtatgtcccaccactttatgtgagttccatttccaaagtgtag 43657067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 140 - 234
Target Start/End: Original strand, 49072044 - 49072138
Alignment:
Q  140 actcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataa 234  Q
    ||||||||||   ||||||||||| |||  ||||| ||||||||||| |  |||  |||||||||||||||||||||||||||||||||||||||    
T  49072044 actcactcttccgttggatgaaattaatttatgtctcaccactttgtatgagttatattttcaaagtgtagacccacaataatttaaaccaataa 49072138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 24429116 - 24429053
Alignment:
Q  190 ggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagag 253  Q
    ||||||||||| |||||||||| ||||||| |||||||||||||| | ||||||||||||||||    
T  24429116 ggttcaatttttaaagtgtagatccacaatgatttaaaccaataaaatagtgagtattagagag 24429053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 38138690 - 38138615
Alignment:
Q  173 tcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtatta 248  Q
    |||||||| ||||||||| ||| || |||||||| |||| ||||||| |||||||||||||||||||| |||||||    
T  38138690 tcccaccattttgtgtagtttctatcttcaaagtatagatccacaatgatttaaaccaataagagagtaagtatta 38138615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 139 - 253
Target Start/End: Original strand, 36750974 - 36751088
Alignment:
Q  139 cactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagaga 238  Q
    |||||||||| ||| || ||||||||| ||||||||| |||||||| ||||||||  ||||  ||||||||||| |||| | ||| |||| |||||||||    
T  36750974 cactcactctcttactgaatgaaatcagtgcatgtcctaccactttatgtaggtttcatttctaaagtgtagactcacattgattaaaactaataagaga 36751073  T
Q  239 gtgagtattagagag 253  Q
    || | | ||||||||    
T  36751074 gtaaatgttagagag 36751088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 142 - 228
Target Start/End: Original strand, 42340872 - 42340958
Alignment:
Q  142 tcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaac 228  Q
    ||||||||||||| || || || |||||||||| ||||||||||| | || | ||||||||||||| ||||||||||| ||||||||    
T  42340872 tcactcttttattagaagatataaatgcatgtctcaccactttgtattggcttaattttcaaagtgcagacccacaatgatttaaac 42340958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 146 - 267
Target Start/End: Original strand, 44844026 - 44844148
Alignment:
Q  146 tcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgta-gacccacaataatttaaaccaataagagagtgagt 244  Q
    |||||||||| || |||| |||| ||||||||||| ||  |||  |||||||||| |||||||| |||||||||| |||||| ||||||| | |||||||    
T  44844026 tcttttattgaataaaataaatgtatgtcccaccatttcatgtgagttcaatttttaaagtgtatgacccacaatgatttaatccaataaaaaagtgagt 44844125  T
Q  245 attagagagggtgttcaaaagag 267  Q
     |||||||| ||||  |||||||    
T  44844126 gttagagagagtgtcaaaaagag 44844148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 131 - 267
Target Start/End: Complemental strand, 24749060 - 24748923
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgta-gacccacaataatttaaacc 229  Q
    ||||||| |||||| |||||||| || ||| ||||||| ||||||||||| ||| ||| ||||| ||||  |||||||| | || ||| | |||| | ||    
T  24749060 ctctctaacactcattcttttatggggtgatatcaatgtatgtcccaccattttatgtgggttccatttctaaagtgtaggtcctacattgatttcatcc 24748961  T
Q  230 aataagagagtgagtattagagagggtgttcaaaagag 267  Q
    ||||| ||||||||| |||||||| ||| |||||||||    
T  24748960 aataaaagagtgagtgttagagagagtgctcaaaagag 24748923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 146 - 247
Target Start/End: Complemental strand, 20586986 - 20586885
Alignment:
Q  146 tcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagta 245  Q
    ||||||||| || | |||| ||| |||| |||||||||| |||| ||| | |||| ||||| || | | |||||||||||||||||||| ||||||||||    
T  20586986 tcttttatttgaaggaatcgatgtatgttccaccactttatgtatgtttagtttttaaagtatatatcaacaataatttaaaccaataaaagagtgagta 20586887  T
Q  246 tt 247  Q
    ||    
T  20586886 tt 20586885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 180 - 281
Target Start/End: Complemental strand, 29718952 - 29718849
Alignment:
Q  180 actttgtgtaggttcaattttcaaagtgtagaccc-acaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagag--tgttgctag 276  Q
    ||||| ||| |||||||||||| |||||||||||| |||||||||||||| ||||| ||| | ||||||| | | ||||||||||||||  || ||||||    
T  29718952 actttttgtgggttcaattttctaagtgtagacccaacaataatttaaactaataa-agaataagtattaaataaggtgttcaaaagagaatgatgctag 29718854  T
Q  277 catta 281  Q
    |||||    
T  29718853 catta 29718849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 149 - 281
Target Start/End: Original strand, 41607459 - 41607589
Alignment:
Q  149 tttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtatta 248  Q
    ||||||||||| |||||||  ||||| ||| | |||||||  ||| ||||||||||||||||| ||||| | ||||||| |||||| ||| | | |||||    
T  41607459 tttattggatgtaatcaatatatgtctcactattttgtgtgagtttaattttcaaagtgtagatccacagttatttaaatcaataaaagaataattatta 41607558  T
Q  249 gagagggtgttcaaaagagtgttgctagcatta 281  Q
     |||  ||||| |||| |||| |||||||||||    
T  41607559 aaga--gtgtttaaaaaagtgctgctagcatta 41607589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 121 - 168
Target Start/End: Complemental strand, 357923 - 357876
Alignment:
Q  121 cttttcaacactctctagcactcactcttttattggatgaaatcaatg 168  Q
    ||||| ||||||||||| |||||||| |||||||||||||||||||||    
T  357923 cttttgaacactctctatcactcacttttttattggatgaaatcaatg 357876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 168
Target Start/End: Original strand, 54140887 - 54140957
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacact--ctctagcactcactcttttattggatgaaatcaatg 168  Q
    |||||||||||||| | ||| ||||| | ||||  ||||||||||||||| ||||||||||||||||||||    
T  54140887 gaggaatgctagcaacactctcttttgagcactttctctagcactcactcatttattggatgaaatcaatg 54140957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 186
Target Start/End: Complemental strand, 29389193 - 29389108
Alignment:
Q  103 gaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgt 186  Q
    ||||||||||| | ||||||||| | ||||| ||  | |||||||||||| |||| || ||||||||| |||||||||||||||||    
T  29389193 gaatgctagcaacactcacttttgagcactcactttaacactcactctttcattgaataaaatcaatgtatgtcccaccactttgt 29389108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 100 - 210
Target Start/End: Complemental strand, 10769908 - 10769796
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    |||||||||||||| | ||| ||||| | ||||||||  | |||  ||||||||||| | ||||||||||| ||||||||||||||| | | ||||| ||    
T  10769908 gaggaatgctagcaacactctcttttgagcactctctctatcaccgactcttttatttggtgaaatcaatgtatgtcccaccactttatatgggttccat 10769809  T
Q  198 tttcaaagtgtag 210  Q
    ||  |||||||||    
T  10769808 ttctaaagtgtag 10769796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 131 - 168
Target Start/End: Original strand, 24748937 - 24748974
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatg 168  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  24748937 ctctctaacactcactcttttattggatgaaatcaatg 24748974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 210
Target Start/End: Original strand, 3313991 - 3314070
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtag 210  Q
    |||| ||||| ||||| ||||||| |||||||||||||||| || || || ||| ||||||||| ||||  |||||||||    
T  3313991 ctctttagcattcactattttattagatgaaatcaatgcatttctcatcattttatgtaggttccatttcaaaagtgtag 3314070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 21232667 - 21232604
Alignment:
Q  136 tagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattt 199  Q
    ||||||||| | ||||||||| ||||||||||| |||| |||||||||| ||| ||||| ||||    
T  21232667 tagcactcatttttttattgggtgaaatcaatgtatgttccaccactttatgtgggttccattt 21232604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 218
Target Start/End: Complemental strand, 7419323 - 7419241
Alignment:
Q  136 tagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaa 218  Q
    ||||||||||||||||||| ||| |||| |||  ||||||| | | |||||||  |||| |||| ||||||||||| ||||||    
T  7419323 tagcactcactcttttattagataaaataaatatatgtccctctattttgtgtgagttctatttccaaagtgtagatccacaa 7419241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 22856320 - 22856282
Alignment:
Q  195 aattttcaaagtgtagacccacaataatttaaaccaata 233  Q
    ||||||||||||||||| ||||||| |||||||||||||    
T  22856320 aattttcaaagtgtagatccacaattatttaaaccaata 22856282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 27243100 - 27243047
Alignment:
Q  228 ccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagcat 279  Q
    ||||||| ||||||||| |||||||| |||||||||  ||||||||||||||||    
T  27243100 ccaataaaagagtgagtgttagagagagtgttcaaaagagagtgttgctagcat 27243047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 168
Target Start/End: Original strand, 38928000 - 38928073
Alignment:
Q  97 aaagaggaatgctagcacctctcacttttcaacact--ctctagcactcactcttttattggatgaaatcaatg 168  Q
    ||||| ||||||||||| | ||| ||||| | ||||  ||||| |||||||||||||||||| |||||||||||    
T  38928000 aaagaagaatgctagcaacactctcttttgatcactttctctaacactcactcttttattgggtgaaatcaatg 38928073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 267
Target Start/End: Original strand, 39186028 - 39186130
Alignment:
Q  165 aatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaa 264  Q
    |||| ||||| ||||||||| ||   |||| |||| ||||||||||| |  |||| ||||||| ||||||||||| | ||||| ||||| || |||||||    
T  39186028 aatgtatgtctcaccactttatgcgagttctatttccaaagtgtagatctgcaatgatttaaatcaataagagagagggtattggagagagtattcaaaa 39186127  T
Q  265 gag 267  Q
    |||    
T  39186128 gag 39186130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 281
Target Start/End: Original strand, 930641 - 930678
Alignment:
Q  244 tattagagagggtgttcaaaagagtgttgctagcatta 281  Q
    ||||||| || |||||||||||||||||||||||||||    
T  930641 tattagaaagagtgttcaaaagagtgttgctagcatta 930678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 168
Target Start/End: Original strand, 10769752 - 10769789
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatg 168  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  10769752 ctctctagcacttactcttttatttgatgaaatcaatg 10769789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 186
Target Start/End: Complemental strand, 18722572 - 18722535
Alignment:
Q  149 tttattggatgaaatcaatgcatgtcccaccactttgt 186  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  18722572 tttattggatgaaatcaatgtatgtcccaccattttgt 18722535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 267
Target Start/End: Complemental strand, 49418518 - 49418433
Alignment:
Q  183 ttgtgtaggttcaattttcaaagtgtagacccacaataa-tttaaaccaataagagagtgagtattagagagggtgttcaaaagag 267  Q
    |||||| ||||  |||| ||| || |||||||| ||||| |||||| |||||||||||||| || |||||||  ||||||||||||    
T  49418518 ttgtgtgggttatatttccaacgtttagacccataataaatttaaatcaataagagagtgaatactagagagaatgttcaaaagag 49418433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 166
Target Start/End: Complemental strand, 52951543 - 52951475
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaa 166  Q
    ||||| |||||||| | ||| ||||| ||||||||||  |||||||||||| | |||||||||||||||    
T  52951543 gaggagtgctagcaacactctctttttaacactctctctagcactcactctctcattggatgaaatcaa 52951475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 234
Target Start/End: Original strand, 346194 - 346286
Alignment:
Q  142 tcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataa 234  Q
    |||||||||| ||| |||||||  ||||||||| ||||||||||| |  |||  ||||||||||| ||  | |||||| ||||||| ||||||    
T  346194 tcactcttttgttgaatgaaattgatgcatgtctcaccactttgtatgagttttattttcaaagtttacgctcacaatgatttaaaacaataa 346286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 274
Target Start/End: Original strand, 30624739 - 30624794
Alignment:
Q  221 atttaaaccaataagagagtgagtattagagagggtgttc--aaaagagtgttgct 274  Q
    |||||||||||||||||||| ||| ||||||| |||| ||  ||||||||||||||    
T  30624739 atttaaaccaataagagagtaagtgttagagatggtgctcaaaaaagagtgttgct 30624794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 253
Target Start/End: Original strand, 37926552 - 37926684
Alignment:
Q  122 ttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtg-tagacccacaata 220  Q
    |||| ||||||||||| |||||||| | ||||| | ||||||||||| | |||| || ||||| ||| ||  | ||||||||||||   |||| ||| |     
T  37926552 tttttaacactctctaacactcactttcttattaggtgaaatcaatgtaggtcctactactttatgtgggacccattttcaaagtgcgggacctacattg 37926651  T
Q  221 atttaaaccaataagagagtgagtattagagag 253  Q
    |||||| |||| |||||||| ||| ||||||||    
T  37926652 atttaacccaacaagagagtaagtgttagagag 37926684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 127; Significance: 2e-65; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 99 - 279
Target Start/End: Original strand, 34905332 - 34905516
Alignment:
Q  99 agaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaa 196  Q
    |||| |||||||||| | |||| |||||||||||||||  | |||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||    
T  34905332 agagaaatgctagcaacactcatttttcaacactctctctaacactcactcttttattggatgaaatcaatgtatgtcccaccactttgtttgggttcaa 34905431  T
Q  197 ttttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagcat 279  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  34905432 ttttcaaagtgtagacccacaatgatttaaaccaataagagagtgagtattagagagggtgttcaaaagagagtgttgctagcat 34905516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 100 - 259
Target Start/End: Original strand, 445815 - 445976
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacact--ctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    ||||||||||||||   |||| |||||||||||  |||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||| ||||||||    
T  445815 gaggaatgctagcaatactcatttttcaacactatctctagcactcacttttttattggatgaaatcaatgtatgtcacaccactttgtgtgggttcaat 445914  T
Q  198 tttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgtt 259  Q
    ||||||||| ||||  |||||| |||||||||||||||||| |||||||||||||| |||||    
T  445915 tttcaaagtctagagtcacaatgatttaaaccaataagagaatgagtattagagagagtgtt 445976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 117 - 281
Target Start/End: Original strand, 5106312 - 5106480
Alignment:
Q  117 ctcacttttcaacact--ctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagaccc 214  Q
    ||||||||||||||||  ||||| |||||||| ||||||||||| ||||||||| ||||||||||||||||||| || ||||||||||||||||| ||||    
T  5106312 ctcacttttcaacactttctctaacactcacttttttattggataaaatcaatgtatgtcccaccactttgtgtgggatcaattttcaaagtgtacaccc 5106411  T
Q  215 acaataatttaaaccaataagagagtgagtattagagagggtgttcaaaaga--gtgttgctagcatta 281  Q
    ||||  |||||||||||||| ||||||| |||||||||| ||||||||||||  |||||| ||||||||    
T  5106412 acaaggatttaaaccaataatagagtgaatattagagagtgtgttcaaaagagggtgttgttagcatta 5106480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 117 - 281
Target Start/End: Original strand, 1392644 - 1392809
Alignment:
Q  117 ctcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccac 216  Q
    ||||||||| |||||||||||||||||  | ||||||||||||||||||||| ||||| ||| ||||||| |  |||||||||| ||| ||||| |||||    
T  1392644 ctcactttttaacactctctagcactctattttttattggatgaaatcaatgtatgtctcactactttgtatgtgttcaatttttaaaatgtag-cccac 1392742  T
Q  217 aataatttaaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagcatta 281  Q
    ||| |||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||    
T  1392743 aatgatttaaaccaataagagagtgagtattagatagggtgttcaaaagagagtgttgctagcatta 1392809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 117 - 267
Target Start/End: Complemental strand, 10133324 - 10133172
Alignment:
Q  117 ctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagaccc 214  Q
    ||||||||||||||||||||  | ||||||||| ||||||||||||||| | || ||||||||||||||| ||  |||||||||||||||||||||| ||    
T  10133324 ctcacttttcaacactctctctaacactcactcatttattggatgaaattattgtatgtcccaccactttatgggggttcaattttcaaagtgtagaacc 10133225  T
Q  215 acaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagag 267  Q
    ||||| |||||||||||||| ||||||||||||| || | || ||||||||||    
T  10133224 acaatgatttaaaccaataaaagagtgagtattaaagtgagtattcaaaagag 10133172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 148 - 281
Target Start/End: Complemental strand, 12780892 - 12780759
Alignment:
Q  148 ttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtatt 247  Q
    ||||||| | || |||||||| ||||| ||| ||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||| || ||| ||||    
T  12780892 ttttattaggtggaatcaatgtatgtctcactactttgtgttggttcaattttcaaagtgtagatccacaatgatttaaaccaataagggaatgaatatt 12780793  T
Q  248 agagagggtgttcaaaagagtgttgctagcatta 281  Q
    ||||||||||||||||||||| ||||||||||||    
T  12780792 agagagggtgttcaaaagagtattgctagcatta 12780759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 149 - 277
Target Start/End: Complemental strand, 16852105 - 16851975
Alignment:
Q  149 tttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtatta 248  Q
    |||||| |||||||| |||| |||||||||||||||||   |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  16852105 tttattagatgaaataaatgtatgtcccaccactttgtaggggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagagtgggtatta 16852006  T
Q  249 gagagggtgttcaaa--agagtgttgctagc 277  Q
    | |||| ||||||||  ||||||||||||||    
T  16852005 gggaggatgttcaaaagagagtgttgctagc 16851975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 117 - 259
Target Start/End: Complemental strand, 31116290 - 31116146
Alignment:
Q  117 ctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagaccc 214  Q
    ||||||||| ||||||||||  | || |||||||| |||||||||||||||||| ||||||||| |||||||||  |||| |||| ||| ||||| ||||    
T  31116290 ctcacttttgaacactctctctaacattcactcttctattggatgaaatcaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaaccc 31116191  T
Q  215 acaataatttaaaccaataagagagtgagtattagagagggtgtt 259  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||    
T  31116190 acaatgatttaaaccaataagagagtgagtattagagagagtgtt 31116146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 131 - 267
Target Start/End: Original strand, 21987322 - 21987458
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaacca 230  Q
    |||| ||||||||||| ||||||||||||||||||||| || |||||||||||| ||   |||| |||| ||||||||||| || |||| ||||||||||    
T  21987322 ctctttagcactcactattttattggatgaaatcaatgtatatcccaccactttatgcgagttctatttccaaagtgtagatccgcaatgatttaaacca 21987421  T
Q  231 ataagagagtgagtattagagagggtgttcaaaagag 267  Q
    |||||| |||||||||||||||| |||||||||||||    
T  21987422 ataagaaagtgagtattagagagagtgttcaaaagag 21987458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 148 - 267
Target Start/End: Complemental strand, 32112850 - 32112731
Alignment:
Q  148 ttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtatt 247  Q
    ||||||||||||||||||||||||||| ||||| ||||||| ||||  |||||||||||||||| ||||||| ||||||| |||||||||||||| ||||    
T  32112850 ttttattggatgaaatcaatgcatgtcacaccattttgtgtgggttttattttcaaagtgtagatccacaatgatttaaaacaataagagagtgaatatt 32112751  T
Q  248 agagagggtgttcaaaagag 267  Q
    ||||||  ||||||||||||    
T  32112750 agagagaatgttcaaaagag 32112731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 100 - 267
Target Start/End: Complemental strand, 12753943 - 12753774
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctcta--gcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    |||||||||||||| | ||||||||| |||||||| ||  ||| ||||||||| ||||||| ||||  ||||||||||||||||||||||| ||||| ||    
T  12753943 gaggaatgctagcaacactcacttttgaacactctttatagcaatcactctttcattggataaaatacatgcatgtcccaccactttgtgtgggttctat 12753844  T
Q  198 tttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagag 267  Q
    |||||  ||||| || |||||| |||||||| ||||| |||| ||||||||||||| ||||| |||||||    
T  12753843 tttcagggtgtacactcacaatgatttaaactaataaaagagcgagtattagagagagtgttgaaaagag 12753774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 131 - 281
Target Start/End: Complemental strand, 17144821 - 17144671
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaacca 230  Q
    |||||||||||| ||| |||||||| |||||||||||  |||| |||||  |||||||||||| ||||||||||||||||||||||||| |||||||| |    
T  17144821 ctctctagcacttactattttattgaatgaaatcaatatatgttccaccgttttgtgtaggttaaattttcaaagtgtagacccacaatgatttaaacta 17144722  T
Q  231 ataagagagtgagtattagagagggtgttcaaaagagtgttgctagcatta 281  Q
    ||||  |||| ||||||| |||| ||| | |||||||||||| ||||||||    
T  17144721 ataaaggagtaagtattaaagagagtggttaaaagagtgttgttagcatta 17144671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 142 - 259
Target Start/End: Original strand, 2675936 - 2676053
Alignment:
Q  142 tcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtg 241  Q
    |||||||||||||| ||||| |||||| ||||||||||||||||| |||||| |||||||||| ||||||||||||||  ||||||||||||| | ||||    
T  2675936 tcactcttttattgaatgaattcaatgtatgtcccaccactttgtttaggtttaattttcaaaatgtagacccacaatggtttaaaccaataaaaaagtg 2676035  T
Q  242 agtattagagagggtgtt 259  Q
    |||||||||||| |||||    
T  2676036 agtattagagagagtgtt 2676053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 94 - 252
Target Start/End: Original strand, 32122786 - 32122946
Alignment:
Q  94 aaaaaagaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtagg 191  Q
    ||||||||| ||||||| || | ||| |||||||||||||| |  | ||||||||  |||||||||||||||||||  ||||||||||| ||||||   |    
T  32122786 aaaaaagagaaatgctaacaacactctcttttcaacactctttccaccactcacttatttattggatgaaatcaatatatgtcccaccattttgtgggag 32122885  T
Q  192 ttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagaga 252  Q
    |||||||||||||||||||||||||||| |||||| ||||||| | ||||| || ||||||    
T  32122886 ttcaattttcaaagtgtagacccacaatgatttaagccaataaaaaagtgaataatagaga 32122946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 135 - 253
Target Start/End: Complemental strand, 16187575 - 16187460
Alignment:
Q  135 ctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataa 234  Q
    ||||| |||||| |||| |||||| ||||||||| ||  ||||||| |||||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  16187575 ctagccctcactatttt-ttggattaaatcaatgtat--cccaccattttgtgtaagttcaattttcaaagtgtagacctacaattatttaaaccaataa 16187479  T
Q  235 gagagtgagtattagagag 253  Q
    | |||||||||||||||||    
T  16187478 gcgagtgagtattagagag 16187460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 135 - 253
Target Start/End: Complemental strand, 16187793 - 16187678
Alignment:
Q  135 ctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataa 234  Q
    ||||| |||||| |||| |||||| ||||||||| ||  ||||||| |||||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  16187793 ctagccctcactatttt-ttggattaaatcaatgtat--cccaccattttgtgtaagttcaattttcaaagtgtagacctacaattatttaaaccaataa 16187697  T
Q  235 gagagtgagtattagagag 253  Q
    | |||||||||||||||||    
T  16187696 gcgagtgagtattagagag 16187678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 131 - 280
Target Start/End: Complemental strand, 19090365 - 19090213
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagaccc-acaataatttaaacc 229  Q
    ||||||||||| |||||||||||||| ||||||||||| ||||||||||||||| ||| ||||| |||| ||||||||||  || ||| | | || ||||    
T  19090365 ctctctagcacccactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtaggtcctacattgaattcaacc 19090266  T
Q  230 aataagagagtgagtattagagagggtgttcaaaagag--tgttgctagcatt 280  Q
    ||||| |||||||||  ||||||| ||| |||||||||  |||||||||||||    
T  19090265 aataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcatt 19090213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 98 - 264
Target Start/End: Complemental strand, 8442022 - 8441866
Alignment:
Q  98 aagaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttca 195  Q
    |||||||||||||||| | |||| |||||||||||||||  | ||||||||| ||||||||||||||||| |||            ||||||   |||||    
T  8442022 aagaggaatgctagcagcactcatttttcaacactctctctaacactcactcatttattggatgaaatcattgc------------tttgtgggagttca 8441935  T
Q  196 attttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaa 264  Q
    ||||||||||||||||||  ||||||| ||||||||||| |||||||||||||||||| ||||||||||    
T  8441934 attttcaaagtgtagaccttcaataatctaaaccaataaaagagtgagtattagagagagtgttcaaaa 8441866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 98 - 264
Target Start/End: Complemental strand, 8450826 - 8450670
Alignment:
Q  98 aagaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttca 195  Q
    |||||||||||||||| | |||| |||||||||||||||  | ||||||||| ||||||||||||||||| |||            ||||||   |||||    
T  8450826 aagaggaatgctagcagcactcatttttcaacactctctctaacactcactcatttattggatgaaatcattgc------------tttgtgggagttca 8450739  T
Q  196 attttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaa 264  Q
    ||||||||||||||||||  ||||||| ||||||||||| |||||||||||||||||| ||||||||||    
T  8450738 attttcaaagtgtagaccttcaataatctaaaccaataaaagagtgagtattagagagagtgttcaaaa 8450670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 143 - 267
Target Start/End: Complemental strand, 32599086 - 32598962
Alignment:
Q  143 cactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtga 242  Q
    ||||||||||||||||| |||  ||| ||||||| ||||||||||| ||| | |||| |||||||||||  |||||| ||||||| |||||| |||||||    
T  32599086 cactcttttattggatggaatacatgtatgtcccgccactttgtgtgggtgctatttccaaagtgtagattcacaatgatttaaatcaataaaagagtga 32598987  T
Q  243 gtattagagagggtgttcaaaagag 267  Q
    |||||| ||||  |||| |||||||    
T  32598986 gtattaaagagaatgtttaaaagag 32598962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 143 - 266
Target Start/End: Complemental strand, 12785077 - 12784954
Alignment:
Q  143 cactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtga 242  Q
    |||| ||||||||| || |||||||| |||||  || ||||| |||  ||||||||||||||||||||| ||| ||| |||||||||||||||||| ||     
T  12785077 cacttttttattgggtggaatcaatgtatgtcttactactttatgttagttcaattttcaaagtgtagatccataatgatttaaaccaataagagaatgg 12784978  T
Q  243 gtattagagagggtgttcaaaaga 266  Q
     ||||||| ||||| |||||||||    
T  12784977 atattagaaagggtattcaaaaga 12784954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 131 - 210
Target Start/End: Complemental strand, 35128873 - 35128794
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtag 210  Q
    |||||||||| ||||||||||||||| | ||||||||| ||||||||||||||| ||| ||||| |||||||||||||||    
T  35128873 ctctctagcagtcactcttttattgggtaaaatcaatgtatgtcccaccactttatgtgggttccattttcaaagtgtag 35128794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 4595772 - 4595850
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgta 209  Q
    |||||||||||||||||||||||||  ||||||||||| ||||| ||||||||| | | ||||| ||||||||||||||    
T  4595772 ctctctagcactcactcttttattgagtgaaatcaatgtatgtctcaccactttttatgggttccattttcaaagtgta 4595850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 97 - 267
Target Start/End: Original strand, 10060853 - 10061026
Alignment:
Q  97 aaagaggaatgctagcacctctcacttttcaacactctctagcac--tcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttc 194  Q
    ||||||||||||||||| | ||| ||||| |||||||| ||  ||  |||||||||||||   ||||||||||| ||||||| ||||||| ||| |||||    
T  10060853 aaagaggaatgctagcaacactctcttttgaacactctttataacaatcactcttttattatgtgaaatcaatgtatgtcccgccactttatgtgggttc 10060952  T
Q  195 aattttcaaagtgta-gacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagag 267  Q
     |||||||||||||| | || ||| | || | | ||||||| | ||||||| |||||||| ||| |||||||||    
T  10060953 cattttcaaagtgtaggtcctacattgatctcacccaataaaaaagtgagtgttagagagagtgctcaaaagag 10061026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 131 - 280
Target Start/End: Complemental strand, 19737585 - 19737433
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgta-gacccacaataatttaaacc 229  Q
    |||||||||||||||||||| ||||| ||||||||||| || ||| | |||||| ||| ||||  |||| ||||||||| | || ||| | |||| | ||    
T  19737585 ctctctagcactcactctttaattgggtgaaatcaatgtatatcctatcactttatgtgggtttcatttccaaagtgtaggtcctacattgatttgagcc 19737486  T
Q  230 aataagagagtgagtattagagagggtgttcaaa--agagtgttgctagcatt 280  Q
    ||||| |||||||||  |||||||  ||||||||  |||||||||||||||||    
T  19737485 aataaaagagtgagtgatagagagaatgttcaaaagagagtgttgctagcatt 19737433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 139 - 227
Target Start/End: Original strand, 31443997 - 31444085
Alignment:
Q  139 cactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaa 227  Q
    |||||| |||||||||||||||||| |||  |||| |||||| ||||||| ||||||||||||||||||| ||| |||||  |||||||    
T  31443997 cactcattcttttattggatgaaattaatttatgttccaccattttgtgtcggttcaattttcaaagtgttgactcacaaggatttaaa 31444085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 99 - 210
Target Start/End: Complemental strand, 6531482 - 6531369
Alignment:
Q  99 agaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaa 196  Q
    ||||||||||||||| | ||| ||||| |  |||||||  |||||||||||||||||||| ||||||||||| ||||||||| ||||| |||  |||| |    
T  6531482 agaggaatgctagcaacactctcttttgaggactctctccagcactcactcttttattgggtgaaatcaatgtatgtcccactactttatgtgagttcca 6531383  T
Q  197 ttttcaaagtgtag 210  Q
    ||| | ||||||||    
T  6531382 tttccgaagtgtag 6531369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 131 - 267
Target Start/End: Original strand, 12690282 - 12690419
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgt-agacccacaataatttaaacc 229  Q
    ||||||| ||||  ||||||||||||||||||| |||||||||| |||||||||  || |  || |||| |||||||| ||||||||  | |||||||||    
T  12690282 ctctctaacacttgctcttttattggatgaaattaatgcatgtctcaccactttaagtggaatctatttccaaagtgtgagacccaccttgatttaaacc 12690381  T
Q  230 aataagagagtgagtattagagagggtgttcaaaagag 267  Q
    ||||||  || |||| || |||||| |||| |||||||    
T  12690382 aataaggaagagagtgtttgagaggatgttgaaaagag 12690419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 143 - 281
Target Start/End: Original strand, 16436107 - 16436246
Alignment:
Q  143 cactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtga 242  Q
    |||||||| |||  |||||||||||| ||| ||||||| ||||||| ||||| ||||  |||||||||||||| ||  ||||||||||||||  || |||    
T  16436107 cactctttcattatatgaaatcaatgtatg-cccaccattttgtgtgggttctatttctaaagtgtagacccaaaaagatttaaaccaataatcgactga 16436205  T
Q  243 gtattagagagggtgttcaaa--agagtgttgctagcatta 281  Q
     ||||| | || ||||| |||  |||||||||||| |||||    
T  16436206 atattaaaaagagtgtttaaaagagagtgttgctaacatta 16436246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 12327355 - 12327287
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattt 199  Q
    |||||||||| |||||||||||||||||  |||||||| |||||| |||| ||||||| ||||| ||||    
T  12327355 ctctctagcagtcactcttttattggatagaatcaatgtatgtcctaccattttgtgtgggttctattt 12327287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 210
Target Start/End: Original strand, 373429 - 373508
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtag 210  Q
    ||||||||||| |||| ||||||||| | ||||||||| |||||||| |||||| ||| | ||| |||||||||| ||||    
T  373429 ctctctagcacccacttttttattgggtaaaatcaatgtatgtcccagcactttatgtggattccattttcaaagggtag 373508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 131 - 168
Target Start/End: Original strand, 9940388 - 9940425
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatg 168  Q
    |||||||||||||||||||||||||| |||||||||||    
T  9940388 ctctctagcactcactcttttattgggtgaaatcaatg 9940425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 168
Target Start/End: Original strand, 19090209 - 19090279
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactct--ctagcactcactcttttattggatgaaatcaatg 168  Q
    |||||||||||||| | ||| ||||| | ||||||  |||||||||||||||||||||| |||| ||||||    
T  19090209 gaggaatgctagcaacactctcttttgagcactctctctagcactcactcttttattggttgaattcaatg 19090279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 200
Target Start/End: Original strand, 2931576 - 2931660
Alignment:
Q  118 tcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaatttt 200  Q
    |||||||||||||||||||  | || || ||  |||||| ||||||||||||| |||||| |||| ||||||  |||||||||||    
T  2931576 tcacttttcaacactctctctatcattcgcttatttatttgatgaaatcaatgtatgtcctaccattttgtggtggttcaatttt 2931660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 168
Target Start/End: Original strand, 19737431 - 19737499
Alignment:
Q  102 ggaatgctagcacctctcacttttcaaca--ctctctagcactcactcttttattggatgaaatcaatg 168  Q
    |||||||||||| | ||| ||||| ||||  ||||||| |||||||||||||||||| | |||||||||    
T  19737431 ggaatgctagcaacactctcttttgaacattctctctatcactcactcttttattggctcaaatcaatg 19737499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 140 - 168
Target Start/End: Complemental strand, 12488185 - 12488157
Alignment:
Q  140 actcactcttttattggatgaaatcaatg 168  Q
    |||||||||||||||||||||||||||||    
T  12488185 actcactcttttattggatgaaatcaatg 12488157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 117; Significance: 2e-59; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 98 - 267
Target Start/End: Complemental strand, 28490907 - 28490736
Alignment:
Q  98 aagaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttca 195  Q
    |||||||||||||||| |  ||||||||||| |||||||  |||| ||||| ||||||||||||||||||| | |||||||||||||||||||| |||||    
T  28490907 aagaggaatgctagcaacagtcacttttcaaaactctctctagcattcacttttttattggatgaaatcaaagtatgtcccaccactttgtgtaagttca 28490808  T
Q  196 attttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagag 267  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  28490807 attttgaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagag 28490736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 103 - 259
Target Start/End: Complemental strand, 10142154 - 10141998
Alignment:
Q  103 gaatgctagcacctctcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttca 202  Q
    ||||||||||| | |||| ||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||| |||||||    
T  10142154 gaatgctagcaacactcatttttcaacactctatagcactcactcttttattggataaaatcaatgtatgtcccaccactttgtgttggttccattttca 10142055  T
Q  203 aagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgtt 259  Q
    ||||||||||| ||||| ||||||| |||||||||||||||| |||||||| |||||    
T  10142054 aagtgtagaccaacaattatttaaatcaataagagagtgagtgttagagagagtgtt 10141998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 143 - 281
Target Start/End: Complemental strand, 41330531 - 41330393
Alignment:
Q  143 cactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtga 242  Q
    |||||||||||| |||||||| |||| |||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |   |    
T  41330531 cactcttttattagatgaaattaatgtatgtcccatcactttgtgtaggttcaattttcaaagtgtagactcacaatgatttaaaccaataagaaatgta 41330432  T
Q  243 gtattagagagggtgttcaaaagagtgttgctagcatta 281  Q
    |||||| |||| |||||||||||||||||||||||||||    
T  41330431 gtattaaagagtgtgttcaaaagagtgttgctagcatta 41330393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 100 - 280
Target Start/End: Original strand, 34368357 - 34368541
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacact--ctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    |||||||||||||| | || | |||| ||||||  ||||| |||||||||||| ||||||| ||| ||||| |||| |||||||||||||| |||||| |    
T  34368357 gaggaatgctagcaacacttatttttgaacactttctctaacactcactctttcattggataaaaccaatgtatgttccaccactttgtgtgggttcatt 34368456  T
Q  198 tttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagcatt 280  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||   |||||| ||| |||||  |||||||||||||||||    
T  34368457 tttcaaagtgtagacccacaatgatttaaaccaataagagagtgggtgacagagagagtgctcaaaagagagtgttgctagcatt 34368541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 140 - 281
Target Start/End: Complemental strand, 5413878 - 5413732
Alignment:
Q  140 actcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagag 239  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||| ||| |||||||||||||| | ||    
T  5413878 actcactcttttattggatgaaatcaatgtatgtcccaccactttgtgtgggttcaatttacaaagtgtagacccataatgatttaaaccaataaaaaag 5413779  T
Q  240 tgagtatta---gagagggtgttcaaa--agagtgttgctagcatta 281  Q
    |||||||||    |||| |||||||||  ||||||||||| ||||||    
T  5413778 tgagtattatagtagagagtgttcaaaagagagtgttgcttgcatta 5413732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 131 - 281
Target Start/End: Original strand, 37455379 - 37455534
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaacca 230  Q
    ||||||||||| ||||| |||||| ||| ||||||||| |||| |||||| ||||||  ||||||||||||||||||||||| |||||||| ||||||||    
T  37455379 ctctctagcacacactcatttattcgataaaatcaatgtatgttccaccattttgtgggggttcaattttcaaagtgtagactcacaataa-ttaaacca 37455477  T
Q  231 ataagagagtgagtattaga----gagggtgttcaaa--agagtgttgctagcatta 281  Q
    ||||||||||||||||||||    |||||||||||||  ||||||||||||||||||    
T  37455478 ataagagagtgagtattagagagggagggtgttcaaaagagagtgttgctagcatta 37455534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 144 - 281
Target Start/End: Complemental strand, 41105707 - 41105568
Alignment:
Q  144 actcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgag 243  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||| |||||||||||||||||| | ||||||| | ||||||||||||||||||| |||    
T  41105707 actcttttattggatgaaatcaagggatgtcccactactttgtgtgggttcaattttcaaagtgcatacccacagtgatttaaaccaataagagagcgag 41105608  T
Q  244 tattagagagggtgttcaaa--agagtgttgctagcatta 281  Q
    |||||||||| ||| |||||  ||||||||||| ||||||    
T  41105607 tattagagagagtgctcaaaagagagtgttgctcgcatta 41105568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 117 - 253
Target Start/End: Complemental strand, 17537268 - 17537130
Alignment:
Q  117 ctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagaccc 214  Q
    ||||||||||||||||||||  | |||||||||||||||| ||| ||||||||| ||||||||||| ||| ||| |||| ||||||||||||||||| ||    
T  17537268 ctcacttttcaacactctctctatcactcactcttttatttgatcaaatcaatgtatgtcccaccaatttttgttggtttaattttcaaagtgtagatcc 17537169  T
Q  215 acaataatttaaaccaataagagagtgagtattagagag 253  Q
    | ||| |||||||||||||||||||||| ||| ||||||    
T  17537168 ataatgatttaaaccaataagagagtgaatataagagag 17537130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 103 - 267
Target Start/End: Complemental strand, 30326054 - 30325888
Alignment:
Q  103 gaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaatttt 200  Q
    ||||||||||| |  ||||||||  |||||||||  |||||||||| ||||||||||||||||||||| ||||| ||||||||| ||   |||| || |     
T  30326054 gaatgctagcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtctcaccactttatgcgagttctatctc 30325955  T
Q  201 caaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagag 267  Q
    ||||||||||| || |||| |||||||||||||||| |||||||||||||||| |||||||||||||    
T  30325954 caaagtgtagatccgcaatgatttaaaccaataagaaagtgagtattagagagagtgttcaaaagag 30325888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 99 - 243
Target Start/End: Original strand, 39246604 - 39246750
Alignment:
Q  99 agaggaatgctagcacctctcacttttcaaca--ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaa 196  Q
    ||||||||||||||| |  |||||||| | ||  ||||||| || ||||| | ||||||||| ||||||||| |||||||||||||||||||  |||||     
T  39246604 agaggaatgctagcaacaatcacttttgagcatcctctctaacaatcactttcttattggataaaatcaatgtatgtcccaccactttgtgtgagttcag 39246703  T
Q  197 ttttcaaagtgtagacccacaataatttaaaccaataagagagtgag 243  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  39246704 ttttcaaagtgtagacccacaatactttaaaccaataagagagtgag 39246750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 139 - 259
Target Start/End: Complemental strand, 25710614 - 25710494
Alignment:
Q  139 cactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagaga 238  Q
    |||||||||||||||||  ||||||||||| |||||| ||||||| || |  |||| |||||||||||||||||||||||||||||||||||||||||||    
T  25710614 cactcactcttttattgtgtgaaatcaatgtatgtcctaccacttcgtatgagttctattttcaaagtgtagacccacaataatttaaaccaataagaga 25710515  T
Q  239 gtgagtattagagagggtgtt 259  Q
     ||| ||||| |||| |||||    
T  25710514 atgaatattaaagagagtgtt 25710494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 43405431 - 43405543
Alignment:
Q  139 cactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagaga 238  Q
    ||||||||||||||||| |||||||||||| ||||| ||||||||||| || |||| |||| ||||||||||||||||||| ||||||| ||||||||||    
T  43405431 cactcactcttttattgaatgaaatcaatgtatgtctcaccactttgtatatgttctatttccaaagtgtagacccacaatgatttaaatcaataagaga 43405530  T
Q  239 gtgagtattagag 251  Q
    |||| ||| ||||    
T  43405531 gtgaatatcagag 43405543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 131 - 253
Target Start/End: Complemental strand, 28434966 - 28434846
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaacca 230  Q
    ||||||| |||| | ||||||||||||| ||||||||  |||||||||||||  |||| ||||||||||||||||| |||||||||||| ||||||||||    
T  28434966 ctctctaacactaattcttttattggataaaatcaatatatgtcccaccact--gtgttggttcaattttcaaagtttagacccacaatgatttaaacca 28434869  T
Q  231 ataagagagtgagtattagagag 253  Q
    |||||| | ||||||||||||||    
T  28434868 ataagaaaatgagtattagagag 28434846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 122 - 248
Target Start/End: Complemental strand, 28090388 - 28090262
Alignment:
Q  122 ttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataa 221  Q
    |||||||||||||||| |||| ||| || ||||  ||||||||||| ||||||||||||||||||||  |||||||||||||||| |||| | ||||| |    
T  28090388 ttttcaacactctctatcacttactattatattatatgaaatcaattcatgtcccaccactttgtgtgagttcaattttcaaagtttagatcaacaatga 28090289  T
Q  222 tttaaaccaataagagagtgagtatta 248  Q
    ||||||||||||| ||||||| |||||    
T  28090288 tttaaaccaataaaagagtgaatatta 28090262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 104 - 267
Target Start/End: Complemental strand, 28223955 - 28223790
Alignment:
Q  104 aatgctagcacctctcacttttcaacact--ctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttc 201  Q
    |||||||||| | ||||||||||||||||  || || |||| | |||||||||| ||||||| | || |||| |  | | ||||||| || |||||||||    
T  28223955 aatgctagcaacactcacttttcaacactacctttaacacttattcttttattgaatgaaattattgtatgttcaccaattttgtgtgggctcaattttc 28223856  T
Q  202 aaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagag 267  Q
    ||||| |||||||| ||| |||||||||||||| ||||||||||||||||||| ||||||||||||    
T  28223855 aaagtatagacccataatgatttaaaccaataaaagagtgagtattagagaggatgttcaaaagag 28223790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 139 - 267
Target Start/End: Complemental strand, 34384833 - 34384705
Alignment:
Q  139 cactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagaga 238  Q
    |||||| ||||||||||| ||||||||||| ||||||||| | |||||||  |||||||||||||| | ||||| |||||| ||||| ||| |||| |||    
T  34384833 cactcattcttttattgggtgaaatcaatgtatgtcccactattttgtgtgagttcaattttcaaattatagactcacaatgatttagaccgataaaaga 34384734  T
Q  239 gtgagtattagagagggtgttcaaaagag 267  Q
    |||||||||| |||| |||||||||||||    
T  34384733 gtgagtattaaagagagtgttcaaaagag 34384705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 131 - 267
Target Start/End: Complemental strand, 27592602 - 27592466
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaacca 230  Q
    |||| ||||||||||| ||||||||||||||||||||| ||||| ||||||||| ||   |||| |||| ||||||||||| |  |||| ||||||||||    
T  27592602 ctctttagcactcactattttattggatgaaatcaatgtatgtctcaccactttatgcgagttctatttccaaagtgtagatctgcaatgatttaaacca 27592503  T
Q  231 ataagagagtgagtattagagagggtgttcaaaagag 267  Q
    ||||||||||| |||   ||||| || ||||||||||    
T  27592502 ataagagagtgggtacaggagagagtattcaaaagag 27592466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 162 - 253
Target Start/End: Original strand, 14553573 - 14553664
Alignment:
Q  162 atcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagag 253  Q
    ||||||| |||||| |||| |||  || ||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  14553573 atcaatgtatgtcctaccattttacgttggttcaatttttaaagtgtagacccacaataaattaaaccaacaagagagtgagtattagagag 14553664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 100 - 280
Target Start/End: Complemental strand, 42224774 - 42224589
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    |||||||||||||| | ||| ||||| | ||||||||  |||||||||||||||||| | ||||||||||| ||||||||||||||| ||| ||||| ||    
T  42224774 gaggaatgctagcaacactctcttttgagcactctctctagcactcactcttttattaggtgaaatcaatgtatgtcccaccactttatgtgggttccat 42224675  T
Q  198 tttcaaagtgta-gacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagcatt 280  Q
    || ||||||||| | || ||| | |||| | ||||||| |||||||||  | ||||| ||  |||||  |||||||||||||||||    
T  42224674 ttccaaagtgtaggtcctacattgatttcacccaataaaagagtgagtgctggagagagttctcaaaagagagtgttgctagcatt 42224589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 136 - 234
Target Start/End: Complemental strand, 36338035 - 36337937
Alignment:
Q  136 tagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataa 234  Q
    ||||||||| | ||||||| |||||||| |||| ||||||||  | |||||||| ||||||||| ||||||||||||||||||| ||||||||||||||    
T  36338035 tagcactcattattttatttgatgaaattaatgtatgtcccataattttgtgtatgttcaatttccaaagtgtagacccacaatgatttaaaccaataa 36337937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 149 - 234
Target Start/End: Complemental strand, 31885963 - 31885878
Alignment:
Q  149 tttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataa 234  Q
    |||||||||||||| ||||| ||||||||||| ||| || ||||||||||||||||||||||| | ||||| ||||||||||||||    
T  31885963 tttattggatgaaaacaatggatgtcccaccattttctggaggttcaattttcaaagtgtagatctacaatgatttaaaccaataa 31885878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 99 - 280
Target Start/End: Complemental strand, 28611962 - 28611777
Alignment:
Q  99 agaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaa 196  Q
    |||||||||||| || | ||||||||| | ||||||||  | || ||||||||| |||||||  || || || |||||||| |||||||| |  |||| |    
T  28611962 agaggaatgctaacaacactcacttttgagcactctctctaacattcactctttcattggatataaccagtgtatgtcccatcactttgtatgagttcca 28611863  T
Q  197 ttttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagcatt 280  Q
    |||| ||||||||||| |||||| ||||||| |||||| |||||  || |||||||| ||| |||||  |||||||||||||||||    
T  28611862 tttttaaagtgtagacgcacaatgatttaaatcaataaaagagttggtgttagagagagtgctcaaaagagagtgttgctagcatt 28611777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 131 - 278
Target Start/End: Complemental strand, 40971603 - 40971453
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgta-gacccacaataatttaaacc 229  Q
    |||||||||||||||||||||||||  ||||||||||| ||||||||||||||| |||| |||  |||| ||||||||| | |  ||| | |||| | ||    
T  40971603 ctctctagcactcactcttttattgagtgaaatcaatgtatgtcccaccactttatgtaagtttcatttccaaagtgtaggtcttacattgattttaccc 40971504  T
Q  230 aataagagagtgagtattagagagggtgttcaaa--agagtgttgctagca 278  Q
    ||||| | ||||||| ||||| || |||||||||  |||||||||||||||    
T  40971503 aataaaatagtgagtgttagatagagtgttcaaaagagagtgttgctagca 40971453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 139 - 253
Target Start/End: Original strand, 10950124 - 10950238
Alignment:
Q  139 cactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagaga 238  Q
    |||| ||||||| |||| |||||||||||| ||||||||||| ||||| | | ||| ||||||||||| ||||| || ||| |||||||| |||||||||    
T  10950124 cacttactctttcattgaatgaaatcaatgtatgtcccaccattttgtatggattctattttcaaagtatagactcataatgatttaaactaataagaga 10950223  T
Q  239 gtgagtattagagag 253  Q
     ||| ||||||||||    
T  10950224 atgaatattagagag 10950238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 100 - 210
Target Start/End: Complemental strand, 13456346 - 13456236
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattt 199  Q
    |||||||||||||| | ||  ||||| | |||||||||  |||||||||||||| |||||||||||||| || |||||||| ||| ||| ||||| ||||    
T  13456346 gaggaatgctagcagcactttcttttgagcactctctattactcactcttttatcggatgaaatcaatgtatttcccaccattttatgtgggttccattt 13456247  T
Q  200 tcaaagtgtag 210  Q
    |||||||||||    
T  13456246 tcaaagtgtag 13456236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 135 - 280
Target Start/End: Complemental strand, 17568848 - 17568700
Alignment:
Q  135 ctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgta-gacccacaataatttaaaccaata 233  Q
    |||||||||||||||||||||  ||||||||||  |||||||||||||||  |||||||| |||| ||||||||| | || ||| |||||| | ||||||    
T  17568848 ctagcactcactcttttattgagtgaaatcaatttatgtcccaccactttaggtaggttctatttccaaagtgtaggtcctacattaatttcatccaata 17568749  T
Q  234 agagagtgagtattagagagggtgttcaaa--agagtgttgctagcatt 280  Q
    | |||||| ||  ||| ||| ||| |||||  |||||||||||||||||    
T  17568748 aaagagtgggtgctagggagagtgctcaaaagagagtgttgctagcatt 17568700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 139 - 253
Target Start/End: Original strand, 24990924 - 24991039
Alignment:
Q  139 cactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgta-gacccacaataatttaaaccaataagag 237  Q
    ||||| |||||||||||| ||||||||||  ||||||||||||||| ||||||||| |||||||||||||| | || ||| | |||| | ||||||| ||    
T  24990924 cactcgctcttttattgggtgaaatcaatatatgtcccaccactttatgtaggttccattttcaaagtgtatgtcctacattgatttcacccaataaaag 24991023  T
Q  238 agtgagtattagagag 253  Q
    |||||||  |||||||    
T  24991024 agtgagtgctagagag 24991039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 156 - 267
Target Start/End: Original strand, 25919266 - 25919377
Alignment:
Q  156 gatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagaggg 255  Q
    ||||||||||||  ||||| ||||| ||||||| || |||||||||||||||||||| |||||| |||||||||||||| | | ||| ||||| |||  |    
T  25919266 gatgaaatcaatatatgtctcaccattttgtgtgggatcaattttcaaagtgtagactcacaatgatttaaaccaataaaaaaatgaatattaaagaaag 25919365  T
Q  256 tgttcaaaagag 267  Q
    | ||||||||||    
T  25919366 tattcaaaagag 25919377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 118 - 264
Target Start/End: Complemental strand, 1923717 - 1923569
Alignment:
Q  118 tcacttttcaacactct--ctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagaccca 215  Q
    ||||||||||| |||||  ||| ||||  || ||||||| |||| ||  |||| ||||| |||||||||||||  |||||||||| |||||||||    |    
T  1923717 tcacttttcaatactctacctaccactttcttttttattagatgcaaagaatgtatgtcacaccactttgtgtgagttcaatttttaaagtgtagtttta 1923618  T
Q  216 caataatttaaaccaataagagagtgagtattagagagggtgttcaaaa 264  Q
    |||| |||||||||||||||| | ||||||||||||| | |||||||||    
T  1923617 caatgatttaaaccaataagataatgagtattagagatgatgttcaaaa 1923569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 95 - 168
Target Start/End: Complemental strand, 24915244 - 24915171
Alignment:
Q  95 aaaaagaggaatgctagcacctctcacttttcaacactctctagcactcactcttttattggatgaaatcaatg 168  Q
    |||||||||||| |||||| | ||| ||||| | |||||||||||||||||||||||||||| |||||||||||    
T  24915244 aaaaagaggaatactagcaacactctcttttaagcactctctagcactcactcttttattgggtgaaatcaatg 24915171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 95 - 168
Target Start/End: Complemental strand, 24991075 - 24991002
Alignment:
Q  95 aaaaagaggaatgctagcacctctcacttttcaacactctctagcactcactcttttattggatgaaatcaatg 168  Q
    |||||||||||| |||||| | ||| ||||| | |||||||||||||||||||||||||||| |||||||||||    
T  24991075 aaaaagaggaatactagcaacactctcttttaagcactctctagcactcactcttttattgggtgaaatcaatg 24991002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 120 - 242
Target Start/End: Original strand, 25630824 - 25630948
Alignment:
Q  120 acttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccaca 217  Q
    |||||||||||||||||  | || | ||| |||||||  || |||| |||| || |||||| | ||||| |||||||||||||||||||||||||||||     
T  25630824 acttttcaacactctctttaacatttactattttatttaataaaattaatgtatatcccactattttgtataggttcaattttcaaagtgtagacccacg 25630923  T
Q  218 ataatttaaaccaataagagagtga 242  Q
    || |||||||||||| ||| |||||    
T  25630924 atgatttaaaccaattagaaagtga 25630948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 153 - 259
Target Start/End: Complemental strand, 34480079 - 34479973
Alignment:
Q  153 ttggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagaga 252  Q
    |||||||||||||||  || || ||||| |||||||   ||||||||| |||||| ||||||||||||||||||| | |||||||| | ||||||||| |    
T  34480079 ttggatgaaatcaatatatatctcaccattttgtgtgaattcaatttttaaagtgcagacccacaataatttaaatcgataagagattaagtattagaaa 34479980  T
Q  253 gggtgtt 259  Q
    || ||||    
T  34479979 ggatgtt 34479973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 253
Target Start/End: Original strand, 24915091 - 24915208
Alignment:
Q  137 agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgta-gacccacaataatttaaaccaataag 235  Q
    ||||||| |||||||||| | ||||||||||  ||||||||||||||| ||| ||||| |||||||||||||| | || ||| | |||| | |||||||     
T  24915091 agcactcgctcttttattaggtgaaatcaatatatgtcccaccactttatgtgggttccattttcaaagtgtatgtcctacattgatttcacccaataaa 24915190  T
Q  236 agagtgagtattagagag 253  Q
    |||||||||  |||||||    
T  24915191 agagtgagtgctagagag 24915208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 97 - 237
Target Start/End: Complemental strand, 28155884 - 28155746
Alignment:
Q  97 aaagaggaatgctagcacctctcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaa 196  Q
    ||||||||| |||| || | |||  |||| || ||| ||||||||| |||||||||||| |||||||||||| |||| | |||| ||| | | |||| ||    
T  28155884 aaagaggaaggctaacaacactctttttttaatactttctagcacttactcttttattgaatgaaatcaatgtatgttcaaccattttttatgggtttaa 28155785  T
Q  197 ttttcaaagtgtagacccacaataatttaaaccaataagag 237  Q
    |||||||||||||||  ||||||  |||| |||||||||||    
T  28155784 ttttcaaagtgtaga--cacaatgttttataccaataagag 28155746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 10666819 - 10666727
Alignment:
Q  150 ttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtga 242  Q
    ||||| ||| |||||| || || ||| |||||||| ||| ||||| ||||| ||| ||||||| |||| ||||||||||||||||||||||||    
T  10666819 ttattagataaaatcattgtatatcctaccactttatgtgggttccatttttaaattgtagactcacattaatttaaaccaataagagagtga 10666727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 278
Target Start/End: Original strand, 4714790 - 4714928
Alignment:
Q  142 tcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtg 241  Q
    ||||| ||||||||||| |||| | ||  ||||||| || ||||||| ||||| ||||||||| ||||||  |||||| ||||| |||||||| ||||      
T  4714790 tcacttttttattggattaaattattgtgtgtcccatcattttgtgtgggttctattttcaaaatgtagatacacaatgatttataccaataaaagagaa 4714889  T
Q  242 agtattagagagggtgttcaaa--agagtgttgctagca 278  Q
      ||||||||||  ||||||||  |||||||||||||||    
T  4714890 catattagagagaatgttcaaaagagagtgttgctagca 4714928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 10253242 - 10253179
Alignment:
Q  121 cttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccacttt 184  Q
    ||||| || |||||||| ||||||||||| ||||||||||||| |||| |||||||||||||||    
T  10253242 cttttgaatactctctaacactcactcttctattggatgaaattaatgtatgtcccaccacttt 10253179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 278
Target Start/End: Original strand, 32401136 - 32401297
Alignment:
Q  122 ttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtag-acccacaa 218  Q
    |||||||||||||||  | |||| ||||| ||||||  |||||| |||| || | |||||||||| ||| ||||| ||||| |||  |||| | |||||     
T  32401136 ttttcaacactctctcaaacacttactctcttattgagtgaaattaatgtatattccaccactttatgtgggttccattttaaaaacgtaggatccacat 32401235  T
Q  219 taatttaaaccaataagagagtgagtattagagagggtgttcaaaaga--gtgttgctagca 278  Q
    ||||||||  |||  | |||||||||||||||||| ||||||||||||  ||||||||||||    
T  32401236 taatttaagtcaactaaagagtgagtattagagagagtgttcaaaagaaggtgttgctagca 32401297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 100 - 188
Target Start/End: Original strand, 17700168 - 17700256
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgt 188  Q
    ||||||| |||||| | ||||||||| || ||||| || | ||||||||||||||||||| || ||||| ||  |||||||||||||||    
T  17700168 gaggaatactagcaacactcacttttgaatactctatacccctcactcttttattggatggaaccaatgtataccccaccactttgtgt 17700256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 210
Target Start/End: Original strand, 4959273 - 4959387
Alignment:
Q  98 aagaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttca 195  Q
    |||||||||||||||| | ||| ||||| | ||||||||  |  || |||||||||||||| ||||||||||| ||||| || || ||| ||| ||||      
T  4959273 aagaggaatgctagcaacactctcttttgagcactctctctaatacccactcttttattgggtgaaatcaatgtatgtctcatcattttatgtgggttac 4959372  T
Q  196 attttcaaagtgtag 210  Q
    |||||||||||||||    
T  4959373 attttcaaagtgtag 4959387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 139 - 194
Target Start/End: Complemental strand, 25564088 - 25564033
Alignment:
Q  139 cactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttc 194  Q
    ||||||| ||||||||||||||||| |||| |||| |||||||||||||| |||||    
T  25564088 cactcacccttttattggatgaaataaatgtatgttccaccactttgtgtgggttc 25564033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 267
Target Start/End: Original strand, 2935445 - 2935495
Alignment:
Q  217 aataatttaaaccaataagagagtgagtattagagagggtgttcaaaagag 267  Q
    |||||||||||||||||| |||||||||||||||||   ||||||||||||    
T  2935445 aataatttaaaccaataaaagagtgagtattagagaaattgttcaaaagag 2935495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 183
Target Start/End: Original strand, 32309477 - 32309562
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaaca--ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactt 183  Q
    ||||||||||||   | ||| ||||||||||  |||||||||||||||||| ||||||||| |||| |||| |||||| |||||||    
T  32309477 gaggaatgctagagacactctcttttcaacattctctctagcactcactctcttattggataaaattaatgtatgtccgaccactt 32309562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 131 - 208
Target Start/End: Original strand, 32050337 - 32050414
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgt 208  Q
    |||||||||| ||| ||||||||||| |||||| |||  ||||| || |||||| ||| ||||| |||||||||||||    
T  32050337 ctctctagcattcattcttttattgggtgaaattaatatatgtctcatcactttatgtgggttccattttcaaagtgt 32050414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 98 - 168
Target Start/End: Original strand, 42224583 - 42224655
Alignment:
Q  98 aagaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatg 168  Q
    |||||||||||||||| | ||| ||||| |  |||||||  |||||||||||||||||||| |||||||||||    
T  42224583 aagaggaatgctagcaacactctcttttgagaactctctccagcactcactcttttattgggtgaaatcaatg 42224655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 43541895 - 43541956
Alignment:
Q  145 ctcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagt 206  Q
    ||||||||||| || ||||||||| ||||| || ||||||||||  ||||||||||||||||    
T  43541895 ctcttttattgaataaaatcaatgtatgtctcatcactttgtgtgagttcaattttcaaagt 43541956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 248
Target Start/End: Original strand, 2525621 - 2525721
Alignment:
Q  148 ttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtatt 247  Q
    ||||||||||||||||||||| || |  |||||||||||||   |||  ||||||||||||| |  || ||| |||||||  ||||||||||||| ||||    
T  2525621 ttttattggatgaaatcaatgtatctatcaccactttgtgtgatttctgttttcaaagtgtaaatacataatgatttaaattaataagagagtgaatatt 2525720  T
Q  248 a 248  Q
    |    
T  2525721 a 2525721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 278
Target Start/End: Complemental strand, 12076133 - 12076063
Alignment:
Q  210 gacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagca 278  Q
    |||||||| | |||||| ||||| ||||||||||||||||| |  |||||||||  |||||||||||||||    
T  12076133 gacccacattgatttaagccaattagagagtgagtattagataaagtgttcaaaagagagtgttgctagca 12076063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 202 - 253
Target Start/End: Complemental strand, 17434928 - 17434877
Alignment:
Q  202 aaagtgtagacccacaataatttaaaccaataagagagtgagtattagagag 253  Q
    |||||||||||||||| | |||||||||||||| |||||||  |||||||||    
T  17434928 aaagtgtagacccacattgatttaaaccaataaaagagtgaacattagagag 17434877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 168
Target Start/End: Original strand, 17568696 - 17568766
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctc--tagcactcactcttttattggatgaaatcaatg 168  Q
    |||||||||||||| | ||| ||||| | |||||||  |||||| ||||||||||||||||||||| ||||    
T  17568696 gaggaatgctagcaacactctcttttgagcactctccctagcacccactcttttattggatgaaattaatg 17568766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 168
Target Start/End: Complemental strand, 26072289 - 26072219
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaaca--ctctctagcactcactcttttattggatgaaatcaatg 168  Q
    |||||||||||||| | ||| ||||| | ||  |||||||||||||||||||||||||| ||||| |||||    
T  26072289 gaggaatgctagcaacactctcttttgagcattctctctagcactcactcttttattgggtgaaaacaatg 26072219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 32050460 - 32050413
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccac 178  Q
    |||||||||||||||| ||||||||| ||||||||||| |||| ||||    
T  32050460 ctctctagcactcacttttttattgggtgaaatcaatgtatgttccac 32050413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 250
Target Start/End: Complemental strand, 5465725 - 5465683
Alignment:
Q  208 tagacccacaataatttaaaccaataagagagtgagtattaga 250  Q
    |||||||| ||| |||||||||||||||||||||| |||||||    
T  5465725 tagacccataatgatttaaaccaataagagagtgaatattaga 5465683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 157
Target Start/End: Original strand, 7137950 - 7137980
Alignment:
Q  127 aacactctctagcactcactcttttattgga 157  Q
    |||||||||||||||||||||||||||||||    
T  7137950 aacactctctagcactcactcttttattgga 7137980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 10299903 - 10299968
Alignment:
Q  121 cttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccacttt 184  Q
    ||||||||||||||||  | |||||| ||| ||||||||||||  ||||||||| |||||||||||    
T  10299903 cttttcaacactctcttcaacactcattctcttattggatgaacccaatgcatgacccaccacttt 10299968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 168
Target Start/End: Original strand, 13456191 - 13456229
Alignment:
Q  130 actctctagcactcactcttttattggatgaaatcaatg 168  Q
    ||||||||||||||||||||||||| | |||||||||||    
T  13456191 actctctagcactcactcttttattaggtgaaatcaatg 13456229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 168
Target Start/End: Complemental strand, 4959431 - 4959394
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatg 168  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  4959431 ctctctagcactcactcttttattgggggaaatcaatg 4959394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 6263913 - 6263966
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccacttt 184  Q
    ||||||| ||||||||| |||||||| | ||||||||  |||||||||||||||    
T  6263913 ctctctatcactcactcctttattgggtaaaatcaatatatgtcccaccacttt 6263966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 104 - 209
Target Start/End: Original strand, 8912511 - 8912618
Alignment:
Q  104 aatgctagcacctctcacttttcaacactct--ctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttc 201  Q
    |||||||||| | ||| ||||| |||||| |  |||||||||||||||||||| | | |||| |||  ||||||| ||||||| ||| ||||  |||| |    
T  8912511 aatgctagcaacgctctcttttaaacactttttctagcactcactcttttatttggtaaaattaatatatgtccctccactttctgtgggtttcatttcc 8912610  T
Q  202 aaagtgta 209  Q
    ||||||||    
T  8912611 aaagtgta 8912618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 196 - 267
Target Start/End: Complemental strand, 25002091 - 25002019
Alignment:
Q  196 attttcaaagtgt-agacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagag 267  Q
    |||| |||||||| |||||||| || |||||||||||| ||| ||||||| || ||||| ||||| |||||||    
T  25002091 atttccaaagtgtgagacccactatgatttaaaccaattagaaagtgagtgttggagagagtgttgaaaagag 25002019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 116; Significance: 7e-59; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 100 - 281
Target Start/End: Original strand, 22189936 - 22190121
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactct--ctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    |||||||||||| | | |||| |||||||||||||  |||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||    
T  22189936 gaggaatgctagaaacactcatttttcaacactctctctagcactcactcttttattggatgaaatcaatgtatggcccaccactttgtgtgggttcaat 22190035  T
Q  198 tttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagcatta 281  Q
    ||||||||||||||||| |||| ||||||||||||||  |||||||||||||||||||||||||||  ||||||||| ||||||||    
T  22190036 tttcaaagtgtagacccgcaatgatttaaaccaataaacgagtgagtattagagagggtgttcaaaagagagtgttgttagcatta 22190121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 94 - 281
Target Start/End: Original strand, 46517284 - 46517473
Alignment:
Q  94 aaaaaagaggaatgctagcacctctcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggtt 193  Q
    |||||||| ||||||||||| | ||||||||| ||||||||||||||||||||| |||||||||| ||||||||| || |||||||| | ||||  ||||    
T  46517284 aaaaaagatgaatgctagcaacactcactttttaacactctctagcactcactcatttattggataaaatcaatgtatatcccaccattctgtgggggtt 46517383  T
Q  194 caattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagcatta 281  Q
    ||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||| ||||||||  ||||||||||||||||||    
T  46517384 caattttcaaagtgtagactcacaatgatttaaaccaataagagaatgagtattagagaggctgttcaaaagagagtgttgctagcatta 46517473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 90 - 294
Target Start/End: Original strand, 27888269 - 27888477
Alignment:
Q  90 ttataaaaaagaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtg 187  Q
    |||||||||||||||||||||||| | ||||||||| | ||||||||  | ||||||| || | ||||||| ||||||||| ||||||||||||||||||    
T  27888269 ttataaaaaagaggaatgctagcaacactcacttttgagcactctctctaacactcaccctctcattggataaaatcaatgtatgtcccaccactttgtg 27888368  T
Q  188 taggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagcattagtct 285  Q
    | ||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||| ||| |||||  |||||||||||||||||  |||    
T  27888369 tgggttcaatttttaaagtgtagacccacaatgatttaaaccaataagagagtgagtgttagagagagtgctcaaaagagagtgttgctagcattcctct 27888468  T
Q  286 ctaaaaaat 294  Q
     ||||||||    
T  27888469 ataaaaaat 27888477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 103 - 281
Target Start/End: Original strand, 14795131 - 14795311
Alignment:
Q  103 gaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaatttt 200  Q
    ||||||||||| | ||||||||||||||||||||  | || ||||| ||||||||||||||||||||| ||||||||||| ||| ||| |||||||||||    
T  14795131 gaatgctagcaacactcacttttcaacactctctctatcagtcacttttttattggatgaaatcaatgtatgtcccaccaatttttgttggttcaatttt 14795230  T
Q  201 caaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagagtgttgctagcatta 281  Q
     |||||||| | ||| ||| |||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  14795231 taaagtgtatatccataatgatttaaactaataagagagtgagtataagagagagtgttcaaaagagtgttgctagcatta 14795311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 103 - 281
Target Start/End: Original strand, 15242123 - 15242303
Alignment:
Q  103 gaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaatttt 200  Q
    ||||||||||| | ||||||||||||||||||||  | || ||||| ||||||||||||||||||||| ||||||||||| ||| ||| |||||||||||    
T  15242123 gaatgctagcaacactcacttttcaacactctctctatcagtcacttttttattggatgaaatcaatgtatgtcccaccaatttttgttggttcaatttt 15242222  T
Q  201 caaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagagtgttgctagcatta 281  Q
     |||||||| | ||| ||| |||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  15242223 taaagtgtatatccataatgatttaaactaataagagagtgagtataagagagagtgttcaaaagagtgttgctagcatta 15242303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 48374618 - 48374440
Alignment:
Q  102 ggaatgctagcacctctcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttc 201  Q
    |||||||||||| | ||||||||| |||||||||||| |||||||||||||||| ||| |||  ||||||||||||||||||| | | ||||| |||| |    
T  48374618 ggaatgctagcaacactcacttttgaacactctctagtactcactcttttattgaatggaattcatgcatgtcccaccactttctatgggttctatttcc 48374519  T
Q  202 aaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagca 278  Q
    |||||||| || |||||||||||||||||| ||||||||||||||||||||| |||||||||  |||||||||||||||    
T  48374518 aaagtgtatactcacaataatttaaaccaacaagagagtgagtattagagagagtgttcaaaagagagtgttgctagca 48374440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 131 - 281
Target Start/End: Original strand, 11824101 - 11824251
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaacca 230  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| ||||||||| ||||||| ||    
T  11824101 ctctctagcactcactcttttattggatgaaatcaatgtatgtcccaccattttgtgtagcttcaattttcaaagtgtaaacccacaatgatttaaatca 11824200  T
Q  231 ataagagagtgagtattagagagggtgttcaaa--agagtgttgctagcatta 281  Q
    |||||| |||||||||||||||  |||||||||  ||||||||| ||||||||    
T  11824201 ataagaaagtgagtattagaga--gtgttcaaaagagagtgttgttagcatta 11824251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 96 - 241
Target Start/End: Complemental strand, 31502651 - 31502504
Alignment:
Q  96 aaaagaggaatgctagcacctctcacttttcaaca--ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggtt 193  Q
    |||||||||||||||||| | ||||||||||||||  ||||||| |||||||||||||||||||||||||||| | ||||||||||| |||||||  |||    
T  31502651 aaaagaggaatgctagcaacactcacttttcaacagtctctctaacactcactcttttattggatgaaatcaaggtatgtcccaccattttgtgtgcgtt 31502552  T
Q  194 caattttcaaagtgtagacccacaataatttaaaccaataagagagtg 241  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||    
T  31502551 caattttcaaagtgtagactcacaatgatttaaaccaataagagagtg 31502504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 97 - 266
Target Start/End: Original strand, 32205073 - 32205241
Alignment:
Q  97 aaagaggaatgctagcacctctcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaa 196  Q
    ||||||||||||||||| | ||||||||| ||||||||||   ||||||||||||||||||||||||||||| |||||| |||| ||||||| |||||||    
T  32205073 aaagaggaatgctagcaacactcacttttgaacactctctct-actcactcttttattggatgaaatcaatgtatgtcctaccattttgtgtgggttcaa 32205171  T
Q  197 ttttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaaga 266  Q
    |||| ||||| |||  | ||||| |||||||| ||||||||||||||||||||||||| |||||||||||    
T  32205172 tttttaaagtataggtctacaatgatttaaactaataagagagtgagtattagagaggatgttcaaaaga 32205241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 100 - 267
Target Start/End: Original strand, 33008101 - 33008267
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacact--ctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    |||||||||||||| | ||||||||| ||||||  ||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||| ||    
T  33008101 gaggaatgctagcaacactcacttttgaacactatctctagcactcactcttttattggatgaaatcattgtatgtcccaccactttgtgtgggttctat 33008200  T
Q  198 tttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagag 267  Q
    || ||| ||||||||||||||| |||||||||||||| |||| ||||||||   || |||||||||||||    
T  33008201 ttccaatgtgtagacccacaatgatttaaaccaataaaagagagagtatta---agagtgttcaaaagag 33008267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 99 - 280
Target Start/End: Original strand, 27949269 - 27949454
Alignment:
Q  99 agaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaa 196  Q
    ||||||| |||| || | ||||||||| ||||||||||  | ||||||||||| ||||||||||||||||   |||||| |||| |||||||  ||||||    
T  27949269 agaggaaagctaacaacactcactttttaacactctctctaacactcactcttgtattggatgaaatcaagttatgtcctaccattttgtgtgagttcaa 27949368  T
Q  197 ttttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagcatt 280  Q
     |||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||  |||||||||||||||||    
T  27949369 atttcaaagtgtagacccacaatgatttaaactaataagagagtgagtattagagagagtgttcaaaagagagtgttgctagcatt 27949454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 142 - 281
Target Start/End: Original strand, 11692220 - 11692361
Alignment:
Q  142 tcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtg 241  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| || |||| | |||||||| |||| |||||||    
T  11692220 tcactcttttattggatgaaatcaatgtatgtcctaccactttgtgtaggttcaattttcaaagtgtaaactcacagtgatttaaactaatatgagagtg 11692319  T
Q  242 agtattagagagggtgttcaaa--agagtgttgctagcatta 281  Q
    |||||||||||| |||||||||  ||||||||||||| ||||    
T  11692320 agtattagagagtgtgttcaaaagagagtgttgctagtatta 11692361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 100 - 259
Target Start/End: Complemental strand, 12263619 - 12263458
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    |||||| ||||||| | || |||||||||||||||||  | ||  ||||||||||| ||||| |||||||| |||||||| ||||||||||||| |||||    
T  12263619 gaggaacgctagcaacacttacttttcaacactctctctatcatccactcttttatcggatggaatcaatgtatgtcccatcactttgtgtaggatcaat 12263520  T
Q  198 tttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgtt 259  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||    
T  12263519 tttcaaagtgtagacccacaatgatttaaaccaataagatagtgagtattagagagagtgtt 12263458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 122 - 281
Target Start/End: Original strand, 7775019 - 7775181
Alignment:
Q  122 ttttcaacactctcta--gcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaat 219  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||| || ||| |||    
T  7775019 ttttcaacactctctatagcactcactcttttattggatgaaatcaatgtatgtcccaccactttgtgtgagttcaattttcaaagtgtgga-ccagaat 7775117  T
Q  220 aatttaaaccaataagagagtgagtattagagagggtgttcaaaagag--tgttgctagcatta 281  Q
     |||||||| |||||| |||||| |||||||||| |||||||||||||  ||||| ||||||||    
T  7775118 gatttaaacaaataagtgagtgaatattagagagagtgttcaaaagagaatgttgttagcatta 7775181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 97 - 267
Target Start/End: Original strand, 39254077 - 39254249
Alignment:
Q  97 aaagaggaatgctagcacctctcacttttcaacactctcta--gcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttc 194  Q
    |||||| |||||||||| |  ||||||||||||| ||||||  |||||||||||||||||| || |||| |||| ||||  ||||||||||||| |||||    
T  39254077 aaagagaaatgctagcaacattcacttttcaacattctctatagcactcactcttttattgaataaaattaatgtatgtttcaccactttgtgttggttc 39254176  T
Q  195 aattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagag 267  Q
    |||||| ||| |||||||||||||||||||||| |||||||||||||||| ||| |||| |||||||||||||    
T  39254177 aatttttaaaatgtagacccacaataatttaaatcaataagagagtgagtgttaaagagagtgttcaaaagag 39254249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 103 - 277
Target Start/End: Complemental strand, 32213049 - 32212872
Alignment:
Q  103 gaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaatttt 200  Q
    ||||||||| | | ||||||||| ||||||||||  |||||||  ||||||||||||||||||||||| ||||| ||| ||||||| |  ||||||||||    
T  32213049 gaatgctagtaacactcactttttaacactctctctagcactctatcttttattggatgaaatcaatgtatgtctcactactttgtatgtgttcaatttt 32212950  T
Q  201 caaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagc 277  Q
     ||| ||||| |||||||| |||||||||||||||||||||||||||| | ||||||||||||  ||||||||||||||    
T  32212949 taaaatgtag-cccacaatgatttaaaccaataagagagtgagtattatatagggtgttcaaaagagagtgttgctagc 32212872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 100 - 281
Target Start/End: Original strand, 6442162 - 6442347
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    |||||||| || || | |||| |||||||||||||||  | |||||| || ||||||| |||||||||||| |||| |||||| ||||||  | ||||||    
T  6442162 gaggaatgttaacaacactcatttttcaacactctctctatcactcagtcatttattgtatgaaatcaatgtatgttccaccattttgtggggattcaat 6442261  T
Q  198 tttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaag--agtgttgctagcatta 281  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||| |||  |||||||||||  |||||||||| |||||    
T  6442262 tttcaaagtgtagacccacaatgatttaaaccaataaaagagtgagtattaaagatagtgttcaaaagaaagtgttgctaacatta 6442347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 100 - 267
Target Start/End: Complemental strand, 6580188 - 6580016
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactct--ctagcactcactcttttattg---gatgaaatcaatgcatgtcccaccactttgtgtaggttc 194  Q
    |||||||| ||||| | ||||||||||||||||||  || ||||||||| |||| ||    | || | |||||| ||||| ||| |||||||||||||||    
T  6580188 gaggaatggtagcaacactcacttttcaacactctttcttgcactcactttttttttttttggtggattcaatgtatgtctcactactttgtgtaggttc 6580089  T
Q  195 aattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagag 267  Q
    |||||||||| | | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  6580088 aattttcaaaatatggacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagag 6580016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 120 - 281
Target Start/End: Complemental strand, 44350965 - 44350800
Alignment:
Q  120 acttttcaacact--ctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccaca 217  Q
    |||||||||||||  ||||| ||  |||| ||||||||||| ||||||||| ||||| |  |||||||| ||||||||||||||||||||||||| ||||    
T  44350965 acttttcaacactttctctaacatccacttttttattggatcaaatcaatgtatgtctcgtcactttgtttaggttcaattttcaaagtgtagactcaca 44350866  T
Q  218 ataatttaaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagcatta 281  Q
    || ||||||||||| || ||||||||||||||||| ||||||||||  ||||||||| ||||||||    
T  44350865 atgatttaaaccaacaaaagagtgagtattagagatggtgttcaaaagagagtgttgttagcatta 44350800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 98 - 279
Target Start/End: Complemental strand, 19423019 - 19422838
Alignment:
Q  98 aagaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttca 195  Q
    |||| ||||| ||||| | ||||||||||||||||||||  | |||||||||||| ||||||||||||||||| |||||||||| | |||| | |   |     
T  19423019 aagaagaatgttagcaacactcacttttcaacactctctctatcactcactctttcattggatgaaatcaatgtatgtcccaccccattgtattgtcact 19422920  T
Q  196 attttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagagtgttgctagcat 279  Q
    |||||| ||||||||| ||||||| |||||||||||||| ||||||||||| |||||  |||||||||  ||||||||||||||    
T  19422919 attttcgaagtgtagatccacaatgatttaaaccaataaaagagtgagtatcagagatagtgttcaaa--agtgttgctagcat 19422838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 104 - 281
Target Start/End: Complemental strand, 25687019 - 25686833
Alignment:
Q  104 aatgctagcacctctcacttttcaacactctctagcactcactcttttat-------tggatgaaatcaatgcatgtcccaccactttgtgtaggttcaa 196  Q
    ||||||| || | |||| |||| |||||||||||||| ||||||||||||       | ||||||||||||| |||||  |||||||| | | |||||||    
T  25687019 aatgctatcaacactcatttttgaacactctctagcagtcactcttttatattttatttgatgaaatcaatgtatgtcataccactttttatgggttcaa 25686920  T
Q  197 ttttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagcatta 281  Q
    ||||||||||||||||||||||| |||||||||||||||| | ||||||||||| ||  ||||||||  |||||||||||| |||||    
T  25686919 ttttcaaagtgtagacccacaatgatttaaaccaataagataatgagtattagaaagaatgttcaaaagagagtgttgctaacatta 25686833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 118 - 262
Target Start/End: Complemental strand, 32178966 - 32178823
Alignment:
Q  118 tcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccaca 217  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||| |||| |||| |||||||| ||| |   |||||||||||||||||| || ||||    
T  32178966 tcacttttcaacactctctagcacttactattttattggatgaaattaatgtatgttccaccactctgt-tttattcaattttcaaagtgtatacacaca 32178868  T
Q  218 ataatttaaaccaataagagagtgagtattagagagggtgttcaa 262  Q
    || ||||||| |||||||||||||| ||| ||||||  |||||||    
T  32178867 atgatttaaatcaataagagagtgattatcagagagattgttcaa 32178823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 140 - 281
Target Start/End: Original strand, 7459382 - 7459525
Alignment:
Q  140 actcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagag 239  Q
    ||||| ||||||||| ||| ||||||||| || | |||||||||| |||  | |||||||||||| | |||| |||||||||||||||||||||| ||||    
T  7459382 actcattcttttattcgataaaatcaatgtatattccaccactttatgtgagctcaattttcaaaatatagatccacaataatttaaaccaataaaagag 7459481  T
Q  240 tgagtattagagagggtgttcaa--aagagtgttgctagcatta 281  Q
    ||||||||| |||| || |||||  || ||||||||||||||||    
T  7459482 tgagtattaaagagagtattcaaataaaagtgttgctagcatta 7459525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 131 - 278
Target Start/End: Complemental strand, 24539273 - 24539123
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgta-gacccacaataatttaaacc 229  Q
    ||||||| |||||||||||||||||||| ||||||||  ||||||||||||||| | | | ||| |||| |||| |||| |||||||| | |||||| ||    
T  24539273 ctctctaacactcactcttttattggataaaatcaatatatgtcccaccactttatatggattccatttccaaaatgtatgacccacattgatttaaccc 24539174  T
Q  230 aataagagagtgagtattagagagggtgttcaaa--agagtgttgctagca 278  Q
    ||| ||||||||||| |||||||| |||| ||||  |||||||||||||||    
T  24539173 aatgagagagtgagtgttagagagagtgtccaaaagagagtgttgctagca 24539123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 173 - 267
Target Start/End: Original strand, 27320446 - 27320540
Alignment:
Q  173 tcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagag 267  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||| |||||||  ||||||| |||||||| ||||||| || ||||||||||    
T  27320446 tcccaccattttgtgtaggttcaatttttaaagtgtagacccacaattatttaaatgaataagaaagtgagtagtagagagagtattcaaaagag 27320540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 100 - 202
Target Start/End: Complemental strand, 8073471 - 8073367
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactct--ctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    ||||||| |||| | | |||| ||||||||| |||  ||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||    
T  8073471 gaggaatactagtaacactcatttttcaacattcttcctagcactcactcttttatcggatgaaatcaatgtatgtcccaccactttgtgtaagttcaat 8073372  T
Q  198 tttca 202  Q
    |||||    
T  8073371 tttca 8073367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 131 - 280
Target Start/End: Original strand, 13919810 - 13919962
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgta-gacccacaataatttaaacc 229  Q
    ||||||||||||| ||| |||||||| ||||||||||| ||||||||||||||| ||| ||||| |||||||||||||| | || ||| | |||| | ||    
T  13919810 ctctctagcactcgctcatttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccattttcaaagtgtaggtcctacattgatttcaccc 13919909  T
Q  230 aataagagagtgagtattagagagggtgttcaaa--agagtgttgctagcatt 280  Q
    |||||  ||||||||  ||||||| ||| |||||  |||||||||||||||||    
T  13919910 aataaatgagtgagtgctagagagagtgctcaaaagagagtgttgctagcatt 13919962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 104 - 234
Target Start/End: Complemental strand, 25092840 - 25092708
Alignment:
Q  104 aatgctagcacctctcacttttcaacactctcta--gcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttc 201  Q
    ||||||| || | ||||||||||||||||||||   |||| |||||||| ||| |||| |||||||| |||||| || |||||||||  |||||||||||    
T  25092840 aatgctaacaacactcacttttcaacactctcttccgcacccactctttcatttgatgcaatcaatgtatgtcctactactttgtgtgagttcaattttc 25092741  T
Q  202 aaagtgtagacccacaataatttaaaccaataa 234  Q
     |||| ||||| |||||||||||||||||||||    
T  25092740 taagtatagacacacaataatttaaaccaataa 25092708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 131 - 278
Target Start/End: Original strand, 17749724 - 17749874
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgta-gacccacaataatttaaacc 229  Q
    ||||||| |||||||||||||||||||| ||||||||  ||||||||||||||| | | | ||  |||| |||| |||| |||||||| | |||||| ||    
T  17749724 ctctctaacactcactcttttattggataaaatcaatatatgtcccaccactttatatggatttcatttccaaaatgtatgacccacattgatttaaccc 17749823  T
Q  230 aataagagagtgagtattagagagggtgttcaaa--agagtgttgctagca 278  Q
    ||| ||||||||||| |||||||| |||| ||||  |||||||||||||||    
T  17749824 aatgagagagtgagtgttagagagagtgtccaaaagagagtgttgctagca 17749874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 19494488 - 19494409
Alignment:
Q  132 tctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtaga 211  Q
    ||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| ||| ||||| ||||||||||||||||    
T  19494488 tctctagtactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccattttcaaagtgtaga 19494409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 141 - 236
Target Start/End: Complemental strand, 36845661 - 36845567
Alignment:
Q  141 ctcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataaga 236  Q
    ||||||||||||||| |||||||||||  || || ||||| ||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||    
T  36845661 ctcactcttttattgaatgaaatcaatatat-tctcaccaatttgtgtgggttcaattttcaaagtatagacccacaatgatttaaaccaataaga 36845567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 131 - 280
Target Start/End: Complemental strand, 26703590 - 26703438
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgta-gacccacaataatttaaacc 229  Q
    |||||||||||||||||||||||||| ||||||||||| ||||| ||||||||| ||| ||||| ||||  |||||||| | || ||| | |||| | ||    
T  26703590 ctctctagcactcactcttttattgggtgaaatcaatgtatgtctcaccactttatgtgggttccatttctaaagtgtaggtcctacatttatttcaccc 26703491  T
Q  230 aataagagagtgagtattagagagggtgttc--aaaagagtgttgctagcatt 280  Q
    ||||| |||||||||  ||||||| ||| ||  || |||||||||||||||||    
T  26703490 aataaaagagtgagtgctagagagagtgctcagaagagagtgttgctagcatt 26703438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 120 - 218
Target Start/End: Complemental strand, 44511099 - 44510999
Alignment:
Q  120 acttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccaca 217  Q
    |||||||||||||||||  |||||||||| ||||||||||||||||||||| ||||| || |||||||| |  ||||||||||||| ||||||| |||||    
T  44511099 acttttcaacactctctctagcactcacttttttattggatgaaatcaatgtatgtctcatcactttgtctgtgttcaattttcaatgtgtagatccaca 44511000  T
Q  218 a 218  Q
    |    
T  44510999 a 44510999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 119 - 211
Target Start/End: Original strand, 12271002 - 12271095
Alignment:
Q  119 cacttttcaacactctcta--gcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtaga 211  Q
    |||||||||||||||||||  |||  |||||||||||  ||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||    
T  12271002 cacttttcaacactctctatagcatccactcttttatcagatgaaatcaatgtatgtcccaccactttgtgt-ggttctattttcaaagtgtaga 12271095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 131 - 210
Target Start/End: Complemental strand, 17354677 - 17354598
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtag 210  Q
    ||||||| |||||| ||||||||||||||||||||||| ||||||||||||||| ||| ||||| |||| ||||||||||    
T  17354677 ctctctaacactcattcttttattggatgaaatcaatgtatgtcccaccactttatgtgggttctatttccaaagtgtag 17354598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 101 - 253
Target Start/End: Complemental strand, 31731439 - 31731283
Alignment:
Q  101 aggaatgctagcacctctcacttttcaacactctctagcactcactcttttattggatgaaatcaatg----catgtcccaccactttgtgtaggttcaa 196  Q
    ||||||| ||||| | ||||||||| ||||||||||| |||| | | || |||||||||  |||||||     |||| ||||||||||||||| |||| |    
T  31731439 aggaatgttagcaacactcacttttgaacactctctatcactgaatattctattggatgtgatcaatgtatatatgttccaccactttgtgtatgttcta 31731340  T
Q  197 ttttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagag 253  Q
    ||| |||| | ||||||| | ||||||||||||||||||| | ||||||||||||||    
T  31731339 tttccaaaatatagacccgcgataatttaaaccaataagaaaatgagtattagagag 31731283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 135 - 280
Target Start/End: Original strand, 14759677 - 14759825
Alignment:
Q  135 ctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgta-gacccacaataatttaaaccaata 233  Q
    |||||||||||||||||||||  ||||||||||  |||||||||||||||  |||||||| |||| ||||||||| | || ||| |||||| | ||||||    
T  14759677 ctagcactcactcttttattgagtgaaatcaatttatgtcccaccactttaggtaggttctatttccaaagtgtaggtcctacattaatttcatccaata 14759776  T
Q  234 agagagtgagtattagagagggtgttcaaa--agagtgttgctagcatt 280  Q
    | |||||| ||  ||| ||| ||| |||||  |||||||||||||||||    
T  14759777 aaagagtgggtgctagggagagtgctcaaaagagagtgttgctagcatt 14759825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 121 - 267
Target Start/End: Original strand, 32605350 - 32605497
Alignment:
Q  121 cttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaa 218  Q
    |||||||||||||| |  |||||||| |||||||| |||||||||||||| ||||| ||  ||||||||| | ||||||||| ||||||||| | |||||    
T  32605350 cttttcaacactctttttagcactcattcttttat-ggatgaaatcaatgtatgtctcattactttgtgtggattcaatttttaaagtgtaggctcacaa 32605448  T
Q  219 taatttaaaccaataagagagtgagtattagagagggtgttcaaaagag 267  Q
    | |||||||  |||||||| || | ||||| ||| | ||||||||||||    
T  32605449 tgatttaaattaataagagggtaaatattaaagaagttgttcaaaagag 32605497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 135 - 278
Target Start/End: Original strand, 45909489 - 45909636
Alignment:
Q  135 ctagcactcactctttt-attggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgta-gacccacaataatttaaaccaat 232  Q
    |||||| |||||||||| ||||| ||||||||||| ||||||||||||||| ||| ||||| |||| |||| |||| | || ||| | |||| | |||||    
T  45909489 ctagcattcactctttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaattgtaggtcctacattgattttacccaat 45909588  T
Q  233 aagagagtgagtattagagagggtgttcaaa--agagtgttgctagca 278  Q
    || ||||||||| |||||||| || ||||||  |||||||||||||||    
T  45909589 aaaagagtgagtgttagagagagtattcaaaagagagtgttgctagca 45909636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 146 - 267
Target Start/End: Complemental strand, 10934100 - 10933979
Alignment:
Q  146 tcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagta 245  Q
    ||||||||||||| |||| |||  ||||| ||||||||||| | | ||| |||| |||||| || ||||||||| |||||||| ||||||||| ||||||    
T  10934100 tcttttattggataaaattaatatatgtctcaccactttgtatggtttctatttccaaagtataaacccacaatgatttaaactaataagagattgagta 10934001  T
Q  246 ttagagagggtgttcaaaagag 267  Q
    ||| | || | |||||||||||    
T  10934000 ttaaaaagagcgttcaaaagag 10933979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 136 - 280
Target Start/End: Complemental strand, 19841030 - 19840883
Alignment:
Q  136 tagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgta-gacccacaataatttaaaccaataa 234  Q
    ||||| ||||||||||||||| ||||||||||| |||||  |||||||| ||| ||||| |||| ||||||||| | || | | | |||| | |||||||    
T  19841030 tagcattcactcttttattggttgaaatcaatgtatgtcttaccactttatgtgggttccatttccaaagtgtaggtcctatattgatttcacccaataa 19840931  T
Q  235 gagagtgagtattagagagggtgttcaaa--agagtgttgctagcatt 280  Q
     |||||||||  ||||||| ||| |||||  |||||||||||||||||    
T  19840930 aagagtgagtgctagagagagtgctcaaaatagagtgttgctagcatt 19840883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 101 - 210
Target Start/End: Original strand, 22786149 - 22786260
Alignment:
Q  101 aggaatgctagcacctctcacttttcaacactct--ctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaatt 198  Q
    ||||||||||||| | ||| ||||| | ||||||  |||||||||||| ||||||| | ||||||||||| ||||| ||||||||| ||| ||||| |||    
T  22786149 aggaatgctagcaacactctcttttgagcactctctctagcactcacttttttattaggtgaaatcaatgtatgtctcaccactttatgtgggttccatt 22786248  T
Q  199 ttcaaagtgtag 210  Q
    | ||||||||||    
T  22786249 tccaaagtgtag 22786260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 140 - 267
Target Start/End: Complemental strand, 25428620 - 25428492
Alignment:
Q  140 actcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtaga-cccacaataatttaaaccaataagaga 238  Q
    ||||||||||||||||  ||||||||||| ||||||||||||||| ||| ||||  |||| ||||||||||| || ||| | |||| | ||||||| |||    
T  25428620 actcactcttttattgtgtgaaatcaatgtatgtcccaccactttatgtgggttacatttccaaagtgtagatcctacattgattttatccaataaaaga 25428521  T
Q  239 gtgagtattagagagggtgttcaaaagag 267  Q
    ||||||  || |||| ||| |||||||||    
T  25428520 gtgagtgctaaagagagtgctcaaaagag 25428492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 117 - 175
Target Start/End: Original strand, 31874047 - 31874105
Alignment:
Q  117 ctcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcc 175  Q
    |||| |||| |||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  31874047 ctcattttttaacactctctagcactcacttttttattggatgaaatcaatgtatgtcc 31874105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 97 - 236
Target Start/End: Original strand, 9648916 - 9649059
Alignment:
Q  97 aaagaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaa--tcaatgcatgtcccaccactttgtgtaggt 192  Q
    ||||||||||||||||    |||| |||| || |||||||  |||||||||| ||| ||||||| |||  |||||| |||| |||||||||||||  |||    
T  9648916 aaagaggaatgctagcgatactcatttttaaatactctctgtagcactcactatttaattggataaaaaatcaatgtatgttccaccactttgtgcgggt 9649015  T
Q  193 tcaattttcaaagtgtagacccacaataatttaaaccaataaga 236  Q
    ||  ||| ||| ||||| ||||||||| ||||||||||||||||    
T  9649016 tctgtttccaatgtgtatacccacaatgatttaaaccaataaga 9649059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 136 - 204
Target Start/End: Original strand, 10477272 - 10477340
Alignment:
Q  136 tagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaa 204  Q
    ||||| ||||| |||||||||||||||||| || ||||  ||||| |||||||||||||||||||||||    
T  10477272 tagcattcactattttattggatgaaatcagtgtatgtttcaccattttgtgtaggttcaattttcaaa 10477340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 200 - 266
Target Start/End: Original strand, 7774944 - 7775009
Alignment:
Q  200 tcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaaga 266  Q
    ||||||||| |||| ||||| |||||||||||||||||||| | |||||||||| ||||||||||||    
T  7774944 tcaaagtgtggacc-acaatgatttaaaccaataagagagtaaatattagagagagtgttcaaaaga 7775009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 202 - 259
Target Start/End: Original strand, 31874117 - 31874174
Alignment:
Q  202 aaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgtt 259  Q
    ||||||||||| |||||| ||||||||| ||||||||||||||||| ||||| |||||    
T  31874117 aaagtgtagactcacaatgatttaaacctataagagagtgagtattcgagagagtgtt 31874174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 32055607 - 32055708
Alignment:
Q  132 tctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaa 231  Q
    |||||| |||| |||| ||||||||||||||||| |  ||||||||||||||| || | || | ||| ||||| ||||||| |||| | |||||||||||    
T  32055607 tctctaacactaactcatttattggatgaaatcattttatgtcccaccactttatgcaagtactattgtcaaactgtagactcacattgatttaaaccaa 32055706  T
Q  232 ta 233  Q
    ||    
T  32055707 ta 32055708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 240
Target Start/End: Complemental strand, 23564156 - 23564076
Alignment:
Q  160 aaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagt 240  Q
    |||| |||| ||||| ||||||||||| |  |||| |||||||||||||||| ||||  |||||||||||||||| |||||    
T  23564156 aaattaatgtatgtcgcaccactttgtatgagttctattttcaaagtgtagatccactgtaatttaaaccaataaaagagt 23564076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 275
Target Start/End: Complemental strand, 36845566 - 36845495
Alignment:
Q  206 tgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgcta 275  Q
    |||||||||||||| |||||||||||||||||||||| ||||  |||| || ||||||  ||||||||||||    
T  36845566 tgtagacccacaatgatttaaaccaataagagagtgaatattctagagagtattcaaaatagagtgttgcta 36845495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 117 - 168
Target Start/End: Original strand, 42466239 - 42466290
Alignment:
Q  117 ctcacttttcaacactctctagcactcactcttttattggatgaaatcaatg 168  Q
    |||||||||||||| |||||| |||||||| ||| |||||||||||||||||    
T  42466239 ctcacttttcaacattctctatcactcactttttcattggatgaaatcaatg 42466290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 12167315 - 12167365
Alignment:
Q  209 agacccacaataatttaaaccaataagagagtgagtattagagagggtgtt 259  Q
    ||||||||||| |||||||||||||||| ||||||||||| |||| |||||    
T  12167315 agacccacaatgatttaaaccaataagaaagtgagtattaaagagagtgtt 12167365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 281
Target Start/End: Original strand, 31759838 - 31759943
Alignment:
Q  176 caccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagagtgttgcta 275  Q
    |||||||||||||   ||||||||  ||||| ||||| | |||| |||||| ||||||||| | |||||||||||||| || |  || || |||||||||    
T  31759838 caccactttgtgtgacttcaatttataaagtatagactcgcaatgatttaagccaataagaaaatgagtattagagagtgtttaaaagagggtgttgcta 31759937  T
Q  276 gcatta 281  Q
    ||||||    
T  31759938 gcatta 31759943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 13919967 - 13919896
Alignment:
Q  99 agaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatg 168  Q
    ||||||||||||||| | ||| ||||| | ||||||||  ||||||||||| |||||||| |||||||||||    
T  13919967 agaggaatgctagcaacactctcttttgagcactctctctagcactcactcatttattgggtgaaatcaatg 13919896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 17813923 - 17813868
Alignment:
Q  132 tctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgt 188  Q
    |||||||||||||||||||||||  | |||||||||| ||| |||||||||||||||    
T  17813923 tctctagcactcactcttttattaaaagaaatcaatgtatg-cccaccactttgtgt 17813868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 167
Target Start/End: Original strand, 19840912 - 19840948
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaat 167  Q
    |||||||||||||||||||||||||| ||||||||||    
T  19840912 ctctctagcactcactcttttattgggtgaaatcaat 19840948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 2520628 - 2520698
Alignment:
Q  98 aagaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaa 166  Q
    ||||||| |||||| | | ||| ||||||||||||||||  | |||||||||||||||||| |||||||||    
T  2520628 aagaggagtgctaggaacactctcttttcaacactctctccaacactcactcttttattgggtgaaatcaa 2520698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 168
Target Start/End: Complemental strand, 14759829 - 14759759
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctc--tagcactcactcttttattggatgaaatcaatg 168  Q
    |||||||||||||| | ||| ||||| | |||||||  |||||| ||||||||||||||||||||| ||||    
T  14759829 gaggaatgctagcaacactctcttttgagcactctccctagcacccactcttttattggatgaaattaatg 14759759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 202 - 265
Target Start/End: Original strand, 31628100 - 31628163
Alignment:
Q  202 aaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaag 265  Q
    ||||||| |||| || || |||||||||||||||||||| ||||||| |||  |||||||||||    
T  31628100 aaagtgttgacctacgatgatttaaaccaataagagagtaagtattaaagatagtgttcaaaag 31628163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 38065478 - 38065415
Alignment:
Q  121 cttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccacttt 184  Q
    |||||||| ||||| || |||| ||| |||||||||||||||| |||| || ||||||||||||    
T  38065478 cttttcaatactctttaacactaacttttttattggatgaaattaatgtatctcccaccacttt 38065415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 3855901 - 3855851
Alignment:
Q  190 ggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagt 240  Q
    |||||||||||||||||  ||||| ||||| |||||||||||||| |||||    
T  3855901 ggttcaattttcaaagttcagacctacaatgatttaaaccaataaaagagt 3855851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 168
Target Start/End: Original strand, 37549618 - 37549691
Alignment:
Q  97 aaagaggaatgctagcacctctcacttttcaacact--ctctagcactcactcttttattggatgaaatcaatg 168  Q
    ||||||||||||||||| | ||| ||||| | ||||  |||||||||| ||||||||||||| |||| ||||||    
T  37549618 aaagaggaatgctagcaacactctcttttgagcactttctctagcacttactcttttattggttgaattcaatg 37549691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 252
Target Start/End: Original strand, 1316387 - 1316424
Alignment:
Q  215 acaataatttaaaccaataagagagtgagtattagaga 252  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  1316387 acaatgatttaaaccaataaaagagtgagtattagaga 1316424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 168
Target Start/End: Original strand, 25428506 - 25428543
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatg 168  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  25428506 ctctttagcactcactcttttattggataaaatcaatg 25428543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 168
Target Start/End: Original strand, 26703467 - 26703504
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatg 168  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  26703467 ctctctagcactcactcttttattgggtgaaataaatg 26703504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 168
Target Start/End: Complemental strand, 41508429 - 41508388
Alignment:
Q  127 aacactctctagcactcactcttttattggatgaaatcaatg 168  Q
    |||||| | ||||||||||| |||||||||||||||||||||    
T  41508429 aacactttttagcactcacttttttattggatgaaatcaatg 41508388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 1688035 - 1688127
Alignment:
Q  153 ttggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagta 245  Q
    |||||||||||  ||| ||||| ||||||||||  |  |||  |||| ||||||||||||| ||||  |||||| ||||||| ||||||||||    
T  1688035 ttggatgaaattgatgtatgtctcaccactttgcatgagttttatttccaaagtgtagacctacaacgatttaacccaataaaagagtgagta 1688127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 26703565 - 26703617
Alignment:
Q  228 ccaataagagagtgagtattagagagggtgttcaaaagagtgttgctagcatt 280  Q
    ||||||| |||||||||  |||||||  || ||||||||||||||||||||||    
T  26703565 ccaataaaagagtgagtgctagagagaatgctcaaaagagtgttgctagcatt 26703617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 247
Target Start/End: Complemental strand, 27248532 - 27248480
Alignment:
Q  195 aattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtatt 247  Q
    |||||||||| ||||||||||||  ||||||||| ||||||||| ||| ||||    
T  27248532 aattttcaaaatgtagacccacatcaatttaaacaaataagagaatgaatatt 27248480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 46067976 - 46068036
Alignment:
Q  139 cactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattt 199  Q
    |||||||||  ||||||| ||||||||||| |||| |||||||||| ||| ||||| ||||    
T  46067976 cactcactcccttattggttgaaatcaatgtatgttccaccactttatgtgggttccattt 46068036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 116; Significance: 7e-59; HSPs: 81)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 104 - 281
Target Start/End: Original strand, 8108957 - 8109138
Alignment:
Q  104 aatgctagcacctctcacttttcaacactct--ctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttc 201  Q
    |||||||||| | ||||||||||||||||||  |||||||||||||||||||||| ||||||||||| ||||||||| | |||||||  |||||||||||    
T  8108957 aatgctagcaacactcacttttcaacactctctctagcactcactcttttattgggtgaaatcaatgtatgtcccactaatttgtgtttgttcaattttc 8109056  T
Q  202 aaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagcatta 281  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||  ||||||||||||||||||    
T  8109057 aaagtgtagacccacaatgatttaaaccaataagaaagtgagtattagagagagtgttcaaaagagagtgttgctagcatta 8109138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 103 - 281
Target Start/End: Original strand, 43771126 - 43771308
Alignment:
Q  103 gaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaatttt 200  Q
    ||||| ||||| | ||||||||| ||||||||||  |  ||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||    
T  43771126 gaatggtagcaacactcacttttgaacactctctctatgactcactcttttattggatgaaatcaatgtatgtcccaccactctgtgtgggttcaatttt 43771225  T
Q  201 caaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagcatta 281  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||  |||| |||||||||||||    
T  43771226 caaagtgtagacccacaatgatttaaaccaataagagagtgagtattaaagagggtgttcaaaagagagcgttgctagcatta 43771308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 131 - 266
Target Start/End: Original strand, 722187 - 722322
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaacca 230  Q
    |||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||    
T  722187 ctctctagcactcacttttttattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaatgatttaaacca 722286  T
Q  231 ataagagagtgagtattagagagggtgttcaaaaga 266  Q
    ||||||||||||||||||||||| ||||||||||||    
T  722287 ataagagagtgagtattagagagagtgttcaaaaga 722322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 120 - 266
Target Start/End: Complemental strand, 754743 - 754595
Alignment:
Q  120 acttttcaacact--ctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccaca 217  Q
    |||||||||||||  ||||| |||||||| |||||||||||||| |||| | |||||||||||||||||||| |||||||||| ||||||||||||||||    
T  754743 acttttcaacactttctctaacactcacttttttattggatgaactcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccaca 754644  T
Q  218 ataatttaaaccaataagagagtgagtattagagagggtgttcaaaaga 266  Q
    || ||||||||||||||||||||||||||||||||| ||||||||||||    
T  754643 atgatttaaaccaataagagagtgagtattagagagagtgttcaaaaga 754595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 100 - 281
Target Start/End: Original strand, 39471154 - 39471339
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    |||||||||||||| | ||||||||| || |||||||  | |||  ||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||    
T  39471154 gaggaatgctagcaacactcacttttaaatactctctttaacaccaactcttttattagatgaaatcaatgtatgtcccaccactttgtgttggttcaat 39471253  T
Q  198 tttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagcatta 281  Q
     ||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||| |||  ||||||||| ||||||||    
T  39471254 cttcaaagtgtagacccacaatgatttaaaccaataagagagtgagtattagagagaatgtttaaaagagagtgttgttagcatta 39471339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 96 - 280
Target Start/End: Original strand, 24834571 - 24834759
Alignment:
Q  96 aaaagaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggtt 193  Q
    ||||||| |||||||||| | |||||||||  |||||||||  | | |||||  |||||||||||| |||||||| ||||||||||| ||||||| ||||    
T  24834571 aaaagagaaatgctagcaacactcactttttgacactctctctaacgctcacatttttattggatggaatcaatgtatgtcccaccattttgtgtgggtt 24834670  T
Q  194 caattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagcatt 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| |||  |||||||||||||||||    
T  24834671 caattttcaaagtgtagacccacaataatttaaaccaataagagagtgactattagagagagagtttaaaagagagtgttgctagcatt 24834759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 99 - 281
Target Start/End: Complemental strand, 26361484 - 26361306
Alignment:
Q  99 agaggaatgctagcacctctcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaatt 198  Q
    ||||||||||||||| | ||||||||||||||||||        ||||||||||||||||||| |||||| ||| ||||||| ||||||| ||||||||     
T  26361484 agaggaatgctagcaacactcacttttcaacactctaa------cactcttttattggatgaagtcaatgtatgacccaccattttgtgtgggttcaata 26361391  T
Q  199 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagcatta 281  Q
    ||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||    
T  26361390 ttcaaagtgtagacccataatgatttaaaccaataagtgagtgagtattagagagggtgttcaaaagagagtgttgctagcatta 26361306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 100 - 239
Target Start/End: Complemental strand, 20225522 - 20225383
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattt 199  Q
    |||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||| ||||| ||||    
T  20225522 gaggaatgctagcaacactcacttttgaacactctctagcactcactcttttattggatggaatccatgcatgtcccaccactttttgtgggttctattt 20225423  T
Q  200 tcaaagtgtagacccacaataatttaaaccaataagagag 239  Q
     |||||||||||| |||||| |||||||||||||||||||    
T  20225422 ccaaagtgtagactcacaatgatttaaaccaataagagag 20225383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 100 - 281
Target Start/End: Original strand, 50164392 - 50164577
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactct--ctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    ||||||| |||| | | ||||||||| ||||||||  ||||||||||||| |||||||||| ||||||||| || |||||||| ||||||  ||||||||    
T  50164392 gaggaatactagtaacactcactttttaacactctctctagcactcactcatttattggataaaatcaatgtatctcccaccattttgtgggggttcaat 50164491  T
Q  198 tttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaag--agtgttgctagcatta 281  Q
    ||||||||||||||| |||||| |||||||||||||||| |||||| ||||||||| |||||||||||  |||||| |||||||||    
T  50164492 tttcaaagtgtagactcacaatgatttaaaccaataagaaagtgagcattagagagagtgttcaaaagatagtgttactagcatta 50164577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 117 - 277
Target Start/End: Original strand, 47009203 - 47009367
Alignment:
Q  117 ctcacttttcaacactct--ctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagaccc 214  Q
    |||| |||||||||||||  |||||||||||||||||||||||| |||| ||||  |||| |||| ||||||||  |||||||||||||||||||||  |    
T  47009203 ctcatttttcaacactctttctagcactcactcttttattggataaaattaatgtttgtctcaccgctttgtgtgagttcaattttcaaagtgtagatac 47009302  T
Q  215 acaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagag--tgttgctagc 277  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||    
T  47009303 acaatgatttaaaccaataagaaagtgagtattagagagggtgttcaaaagagaatgttgctagc 47009367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 98 - 281
Target Start/End: Complemental strand, 34129585 - 34129398
Alignment:
Q  98 aagaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttca 195  Q
    |||||||||| ||||| |  ||||||||||| |||||||  ||||||||||||| |||||||||| ||||||| || ||||||||||||||||  |||||    
T  34129585 aagaggaatggtagcaacattcacttttcaaaactctctctagcactcactcttctattggatgagatcaatgtatatcccaccactttgtgtgtgttca 34129486  T
Q  196 attttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttc--aaaagagtgttgctagcatta 281  Q
    ||||||||||||| ||| ||||||  ||||||||||||| |||||||||||||||||  ||||||  || |||||||||| |||||||    
T  34129485 attttcaaagtgtggactcacaatggtttaaaccaataaaagagtgagtattagagattgtgttcagaagagagtgttgccagcatta 34129398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 120 - 277
Target Start/End: Original strand, 20454557 - 20454716
Alignment:
Q  120 acttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccaca 217  Q
    |||||||||||||||||  |||||||||||||||||| ||| ||||||||| ||||||   |||||||||| |||||||||||||||||||||| |||||    
T  20454557 acttttcaacactctctctagcactcactcttttattagataaaatcaatgtatgtcca--cactttgtgttggttcaattttcaaagtgtagatccaca 20454654  T
Q  218 ataatttaaaccaataagagagtgagtattagagagggtgttcaaaagag--tgttgctagc 277  Q
    || ||||||| |||||| ||||||||| |||||||| |||||||||||||  ||||||||||    
T  20454655 atgatttaaatcaataacagagtgagtgttagagagagtgttcaaaagagaatgttgctagc 20454716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 100 - 281
Target Start/End: Original strand, 49077246 - 49077431
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    |||||||||||||| | |||| ||||||||| |||||  |||||||| ||||||||| ||| |||| |||  ||||||||||||||||||| ||||||||    
T  49077246 gaggaatgctagcaacactcagttttcaacattctctttagcactcattcttttattagataaaattaatatatgtcccaccactttgtgtgggttcaat 49077345  T
Q  198 tttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagcatta 281  Q
    ||| |||||||||||||||||| |||||||||||||||||  |||||| |  ||| |||||| |||  |||||||| |||||||||    
T  49077346 ttttaaagtgtagacccacaatgatttaaaccaataagagtttgagtactcaagaaggtgtttaaaagagagtgttactagcatta 49077431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 139 - 281
Target Start/End: Complemental strand, 24938557 - 24938413
Alignment:
Q  139 cactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagaga 238  Q
    ||||||||||||||||||||| |||||||| ||||||||||| ||||| | | ||||||||| |||||||||||| ||||| ||||||||||||||||||    
T  24938557 cactcactcttttattggatgtaatcaatgtatgtcccaccattttgtttggattcaatttttaaagtgtagacctacaatgatttaaaccaataagaga 24938458  T
Q  239 gtgagtattagagagggtgttcaaaag--agtgttgctagcatta 281  Q
    || |||||||||||  ||||| |||||  | ||||||||||||||    
T  24938457 gtaagtattagagaaagtgttgaaaagataatgttgctagcatta 24938413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 98 - 264
Target Start/End: Complemental strand, 40991774 - 40991606
Alignment:
Q  98 aagaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttca 195  Q
    |||||||||||||||| | ||||||||||||||||||||  | |||||||||||| ||||||||||||||||  |||||||||| | |||| | ||  |     
T  40991774 aagaggaatgctagcaacactcacttttcaacactctctctatcactcactctttcattggatgaaatcaatatatgtcccaccccattgtattggcact 40991675  T
Q  196 attttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaa 264  Q
    ||||   ||||||||||||||||| |||||||||||||| ||||||||||| |||||| ||||||||||    
T  40991674 atttctgaagtgtagacccacaatgatttaaaccaataaaagagtgagtatcagagagagtgttcaaaa 40991606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 118 - 276
Target Start/End: Complemental strand, 10169808 - 10169648
Alignment:
Q  118 tcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccaca 217  Q
    ||||||||||||||||||||  | ||||||| ||||||||||||||||||  |||||| ||||||||||||  ||||||||||||||   |||| |||||    
T  10169808 tcacttttcaacactctctaatattcactctattattggatgaaatcaatatatgtcctaccactttgtgtgagttcaattttcaaaacatagatccaca 10169709  T
Q  218 ataatttaaaccaataagagagtgagtattagagagggtgtt--caaaagagtgttgctag 276  Q
    || |||||||||||||||||||||| ||||| | ||| ||||   ||||||||||||||||    
T  10169708 attatttaaaccaataagagagtgaatattaaaaaggatgttaaaaaaagagtgttgctag 10169648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 134 - 263
Target Start/End: Original strand, 29699522 - 29699650
Alignment:
Q  134 tctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaata 233  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| | ||||||||| ||| || ||||| ||||||| |||||    
T  29699522 tctagcactcactcttttattggatgaaatcaatacatgtcccaccactttgtgttggttcta-tttcaaagtatagcccgacaatgatttaaaacaata 29699620  T
Q  234 agagagtgagtattagagagggtgttcaaa 263  Q
    ||||||||| ||||||| || |||| ||||    
T  29699621 agagagtgaatattagatagagtgtacaaa 29699650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 98 - 259
Target Start/End: Complemental strand, 33653674 - 33653511
Alignment:
Q  98 aagaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttca 195  Q
    |||||||||||||||| | |||| |||||||||||||||  |  | |||||| |||||| ||||||||||||| ||||||||||| ||||||  | ||||    
T  33653674 aagaggaatgctagcaacactcagttttcaacactctctctattaatcactcatttatttgatgaaatcaatgtatgtcccaccattttgtggggtttca 33653575  T
Q  196 attttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgtt 259  Q
    ||||||||| | | || ||||||| |||||||||||||||| |||||||||||||||| |||||    
T  33653574 attttcaaaatattgatccacaatgatttaaaccaataagaaagtgagtattagagagagtgtt 33653511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 144 - 280
Target Start/End: Original strand, 22542424 - 22542562
Alignment:
Q  144 actcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgag 243  Q
    |||||||||||| |||||||||| | |||| |||||||||||||| ||||||||||||||||  ||| |||||||| |||||||| ||||||||||||||    
T  22542424 actcttttattgaatgaaatcaaagtatgttccaccactttgtgtgggttcaattttcaaagaatagtcccacaatgatttaaactaataagagagtgag 22542523  T
Q  244 tattagagagggtgttcaaaag--agtgttgctagcatt 280  Q
    ||||| | || |||||||||||  ||||||| |||||||    
T  22542524 tattaaaaagagtgttcaaaagatagtgttgttagcatt 22542562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 117 - 281
Target Start/End: Original strand, 49242184 - 49242352
Alignment:
Q  117 ctcacttttcaacactct--ctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagaccc 214  Q
    ||||||||| ||||||||  ||| || ||||| ||| ||||||||||||||||  |||||||| |||||||||| |||||||||||||| |||||||  |    
T  49242184 ctcacttttgaacactctatctaacagtcactttttaattggatgaaatcaatatatgtcccatcactttgtgtgggttcaattttcaatgtgtagattc 49242283  T
Q  215 acaataatttaaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagcatta 281  Q
    ||||| |||||||||||||||||| ||||||| | |||| ||||| |||  ||||||||| ||||||||    
T  49242284 acaatgatttaaaccaataagagaatgagtatcatagagagtgtttaaaagagagtgttgttagcatta 49242352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 117 - 225
Target Start/End: Complemental strand, 46242108 - 46242000
Alignment:
Q  117 ctcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccac 216  Q
    ||||||||| |||||||||||| |||||| ||||||| ||||||||||| || ||||||||||| ||||||||||||||||||||||| | |||||||||    
T  46242108 ctcactttttaacactctctagaactcacacttttatgggatgaaatcattgtatgtcccaccattttgtgtaggttcaattttcaaaatatagacccac 46242009  T
Q  217 aataattta 225  Q
    ||| |||||    
T  46242008 aatgattta 46242000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 139 - 242
Target Start/End: Complemental strand, 50481687 - 50481584
Alignment:
Q  139 cactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagaga 238  Q
    |||||||||||||||||||||||||||| | ||||| ||||||||||| | | ||| ||||||||||||||||| |||||| ||||||||||||||||||    
T  50481687 cactcactcttttattggatgaaatcaaagtatgtctcaccactttgtatggtttctattttcaaagtgtagacacacaatcatttaaaccaataagaga 50481588  T
Q  239 gtga 242  Q
    ||||    
T  50481587 gtga 50481584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 151 - 281
Target Start/End: Complemental strand, 45311078 - 45310946
Alignment:
Q  151 tattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattaga 250  Q
    |||||||||||||||||  ||||||||||||||||||  | |||||||||||||||| ||||  ||||| ||||||| |||||||||||| |||||||||    
T  45311078 tattggatgaaatcaatatatgtcccaccactttgtggggattcaattttcaaagtgaagacttacaatgatttaaatcaataagagagtaagtattaga 45310979  T
Q  251 gagggtgttcaaaagag--tgttgctagcatta 281  Q
    |||   |||||||||||  ||||||||||||||    
T  45310978 gagtcagttcaaaagagaatgttgctagcatta 45310946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 139 - 279
Target Start/End: Complemental strand, 48339482 - 48339340
Alignment:
Q  139 cactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagaga 238  Q
    |||||||||| ||||||||  ||||||||| |||| |||||||||||||| |||||||||||||||| ||||||||| |||  ||||||||||||| |||    
T  48339482 cactcactctcttattggaataaatcaatgtatgttccaccactttgtgtgggttcaattttcaaagcgtagacccataatgctttaaaccaataaaaga 48339383  T
Q  239 gtgagtattagagagggtgttcaaaa--gagtgttgctagcat 279  Q
    |||  | |||||||  ||| ||||||  |||||||||||||||    
T  48339382 gtggatgttagagaaagtgctcaaaaacgagtgttgctagcat 48339340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 139 - 267
Target Start/End: Complemental strand, 25719255 - 25719126
Alignment:
Q  139 cactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgta-gacccacaataatttaaaccaataagag 237  Q
    |||||||||| ||||||| ||||||||||| ||||||||||||||| ||| ||||  |||| |||| |||| |||||||||| |||||| ||||| ||||    
T  25719255 cactcactctcttattggttgaaatcaatgtatgtcccaccactttatgtgggtttcatttccaaaatgtaggacccacaatgatttaacccaatcagag 25719156  T
Q  238 agtgagtattagagagggtgttcaaaagag 267  Q
    |||||||||||||||   ||||||||||||    
T  25719155 agtgagtattagagaaattgttcaaaagag 25719126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 133 - 266
Target Start/End: Original strand, 52671862 - 52671995
Alignment:
Q  133 ctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaat 232  Q
    |||||| ||||||| |||||||||||||||| |||| ||||||||||| ||| |||| |||||||||| |||||||| |  | |||| |||||||| |||    
T  52671862 ctctagtactcacttttttattggatgaaataaatgtatgtcccaccattttatgtaagttcaatttttaaagtgtaaattctcaatgatttaaactaat 52671961  T
Q  233 aagagagtgagtattagagagggtgttcaaaaga 266  Q
    |||| ||||||||||| |||| ||||| ||||||    
T  52671962 aagatagtgagtattaaagagagtgtttaaaaga 52671995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 126 - 278
Target Start/End: Original strand, 19447156 - 19447311
Alignment:
Q  126 caacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgta-gacccacaataattt 224  Q
    |||||||||| | ||| |||||| ||||||| ||||| ||||| ||||||||||||||| ||| ||||| ||||||||| || | |||| ||||| ||||    
T  19447156 caacactctcaaacacccactctcttattgggtgaaaccaatgtatgtcccaccactttatgtgggttccattttcaaaatgcaggaccgacaatgattt 19447255  T
Q  225 aaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagca 278  Q
    ||  |||| ||||||||||||||| |||| |||||||||  |||||||||||||||    
T  19447256 aactcaattagagagtgagtattaaagagagtgttcaaaagagagtgttgctagca 19447311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 149 - 281
Target Start/End: Complemental strand, 31251015 - 31250880
Alignment:
Q  149 tttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagta-tt 247  Q
    |||||||||||||||||||| ||||||||||| ||| || | |||||||||||||| |||||||||||||| ||||||| |||||| ||||| | || ||    
T  31251015 tttattggatgaaatcaatgtatgtcccaccattttatggacgttcaattttcaaaatgtagacccacaatgatttaaatcaataaaagagtaaatattt 31250916  T
Q  248 agagagggtgttcaaa--agagtgttgctagcatta 281  Q
    |||||| || || |||  ||||||||||||||||||    
T  31250915 agagagagtatttaaaatagagtgttgctagcatta 31250880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 128 - 278
Target Start/End: Original strand, 13069968 - 13070120
Alignment:
Q  128 acactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgta-gacccacaataatttaa 226  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||| ||| ||||| |||||||||||||| | || ||| | |||| |    
T  13069968 acactctctagcactcactcttttattgg-tgaaatcaatgtatgttccaccactttatgtgggttccattttcaaagtgtaggtcctacattgatttta 13070066  T
Q  227 accaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagca 278  Q
      |||||| ||||||||| |||||||   ||||||||  |||||||||||||||    
T  13070067 ctcaataaaagagtgagtgttagagaaaatgttcaaaagagagtgttgctagca 13070120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 127 - 267
Target Start/End: Complemental strand, 37451165 - 37451027
Alignment:
Q  127 aacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaa 226  Q
    ||||||||||| ||||||||||||||||||||  |||| ||| |  ||  |||| ||||||   |||| ||||||||||||||||| | |||| ||||||    
T  37451165 aacactctctaacactcactcttttattggatagaatccatgtacatcttaccaatttgtga--gttctattttcaaagtgtagactcgcaatgatttaa 37451068  T
Q  227 accaataagagagtgagtattagagagggtgttcaaaagag 267  Q
    |||||||| ||||||||||||||||| |||||| |||||||    
T  37451067 accaataaaagagtgagtattagagaaggtgtttaaaagag 37451027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 147 - 248
Target Start/End: Complemental strand, 50652470 - 50652369
Alignment:
Q  147 cttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtat 246  Q
    ||||||||| || ||||||||| || || ||||||||||||||||||||||||||||| |||||||  ||||||||||||| |||||||| ||||| |||    
T  50652470 cttttattgcataaaatcaatgtatatctcaccactttgtgtaggttcaattttcaaaatgtagacgtacaataatttaaatcaataagaaagtgaatat 50652371  T
Q  247 ta 248  Q
    ||    
T  50652370 ta 50652369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 132 - 281
Target Start/End: Complemental strand, 43124663 - 43124512
Alignment:
Q  132 tctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaa 231  Q
    |||||||  ||||||| |||| ||||||||||||||| ||||||||||| |||||||||| |  ||||||||| |||| |||||  |  |||||||||||    
T  43124663 tctctagtgctcactcatttaatggatgaaatcaatgtatgtcccaccattttgtgtaggctttattttcaaactgtatacccatgaagatttaaaccaa 43124564  T
Q  232 taagagagtgagtattagagagggtgttcaaa--agagtgttgctagcatta 281  Q
    |||||||||| |||||| | || |||||||||  | ||||||| ||||||||    
T  43124563 taagagagtgcgtattataaagagtgttcaaaggaaagtgttgttagcatta 43124512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 98 - 219
Target Start/End: Original strand, 50571859 - 50571982
Alignment:
Q  98 aagaggaatgctagcacctctcacttttcaacactct--ctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttca 195  Q
    |||||||||| ||||| |  |||||||||||||||||  |||||||| ||||||||||| ||||||||||||| ||| |||| || ||| ||| | ||||    
T  50571859 aagaggaatgttagcaacagtcacttttcaacactctctctagcacttactcttttattagatgaaatcaatgtatgccccatcaatttatgtggcttca 50571958  T
Q  196 attttcaaagtgtagacccacaat 219  Q
    ||||||||||||||||||| ||||    
T  50571959 attttcaaagtgtagacccgcaat 50571982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 94 - 199
Target Start/End: Original strand, 22592295 - 22592402
Alignment:
Q  94 aaaaaagaggaatgctagcacctctcacttttcaaca--ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtagg 191  Q
    |||| |||||| || ||||| | ||||||||| ||||  |||||| |||||||||||||||||||||||||| ||||  |||||||||||||||||||||    
T  22592295 aaaatagaggattgatagcaacgctcacttttgaacattctctctggcactcactcttttattggatgaaataaatgtttgtcccaccactttgtgtagg 22592394  T
Q  192 ttcaattt 199  Q
    ||| ||||    
T  22592395 ttctattt 22592402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 132 - 208
Target Start/End: Complemental strand, 42862570 - 42862494
Alignment:
Q  132 tctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgt 208  Q
    ||||||||||||||| ||||||||| ||||||||||| ||||||||||||||| ||| ||||| |||||||||||||    
T  42862570 tctctagcactcacttttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccattttcaaagtgt 42862494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 142 - 253
Target Start/End: Complemental strand, 5044679 - 5044568
Alignment:
Q  142 tcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtg 241  Q
    ||||| ||||||||||||||||||||  ||||| ||| | |||||||  |||||||||| ||| |||||||||||||  |||||||||||||| ||| ||    
T  5044679 tcacttttttattggatgaaatcaatatatgtcacactattttgtgtgagttcaatttttaaaatgtagacccacaacgatttaaaccaataaaagaatg 5044580  T
Q  242 agtattagagag 253  Q
    | ||||||||||    
T  5044579 aatattagagag 5044568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 30867081 - 30867002
Alignment:
Q  132 tctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtaga 211  Q
    ||||||||||||||| ||||||||||| |||| |||| ||||||||||||||| ||| ||||| ||||||||||||||||    
T  30867081 tctctagcactcacttttttattggattaaattaatgtatgtcccaccactttatgtgggttccattttcaaagtgtaga 30867002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 139 - 234
Target Start/End: Complemental strand, 41153340 - 41153245
Alignment:
Q  139 cactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataa 234  Q
    |||| ||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||  |||||||| |  |||||| ||||| ||||||||    
T  41153340 cacttactcttttattggatgaaattcatgcatgtcccaccactttgtgtaggttctatttctaaagtgtacattcacaatgatttagaccaataa 41153245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 136 - 250
Target Start/End: Complemental strand, 45081887 - 45081773
Alignment:
Q  136 tagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataag 235  Q
    ||||||| | ||||||||| |||| |||  |||||||| | |||| ||||||| ||| | |||| ||||||||| || |||||||||||||||||||||     
T  45081887 tagcacttattcttttatttgatggaatacatgcatgttctaccattttgtgtgggtcctatttccaaagtgtacactcacaataatttaaaccaataaa 45081788  T
Q  236 agagtgagtattaga 250  Q
    |||||||||||||||    
T  45081787 agagtgagtattaga 45081773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 159 - 248
Target Start/End: Complemental strand, 46536384 - 46536295
Alignment:
Q  159 gaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtatta 248  Q
    |||||||||  |||||  ||||||||||||| ||||||||||||||||||| ||||||| || |||||| |||||||||||||| |||||    
T  46536384 gaaatcaatatatgtcataccactttgtgtatgttcaattttcaaagtgtaaacccacactattttaaagcaataagagagtgaatatta 46536295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 101 - 210
Target Start/End: Complemental strand, 47237923 - 47237812
Alignment:
Q  101 aggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaatt 198  Q
    |||||||||| || | ||| ||||| ||||||||||  |||| ||||||||||||||||||||||||||  ||||||||||||||| | || |||  |||    
T  47237923 aggaatgctatcaacactctcttttgaacactctctctagcattcactcttttattggatgaaatcaatatatgtcccaccactttatataagtttcatt 47237824  T
Q  199 ttcaaagtgtag 210  Q
    ||||||||||||    
T  47237823 ttcaaagtgtag 47237812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 131 - 285
Target Start/End: Complemental strand, 2187963 - 2187807
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgta-gacccacaataatttaaacc 229  Q
    |||||||||  || |||||||||||| ||||||||||| ||||||||||||||| ||| ||||| |||||||||||||| | |||||| |  ||| |  |    
T  2187963 ctctctagctttcgctcttttattgggtgaaatcaatgaatgtcccaccactttatgtgggttc-attttcaaagtgtaggtcccacattgttttcacac 2187865  T
Q  230 aataagagagtgagtattagagagggtgttcaaaa--gagtgttgctagcattagtct 285  Q
    ||||| | | ||||| |||||||| ||| ||||||  |||||||||||||||| ||||    
T  2187864 aataaaaaaatgagtgttagagagagtgctcaaaagcgagtgttgctagcattcgtct 2187807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 123 - 248
Target Start/End: Original strand, 2860899 - 2861024
Alignment:
Q  123 tttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataat 222  Q
    |||||||||||| | | ||||||| |||| ||||||||||| |||| || | ||| | |||| ||| | |||||||||||||||||||| |||||||| |    
T  2860899 tttcaacactctttggtactcacttttttgttggatgaaattaatgtattttccatccctttctgtggattcaattttcaaagtgtagatccacaatagt 2860998  T
Q  223 ttaaaccaataagagagtgagtatta 248  Q
    |||| ||||| |  ||||||||||||    
T  2860999 ttaagccaatcaccgagtgagtatta 2861024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 134 - 247
Target Start/End: Original strand, 46287474 - 46287587
Alignment:
Q  134 tctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaata 233  Q
    ||||||||| ||| |||||||||||||||| |||  |||||  || |||||||||   ||||||||||||||||| ||| |||||| |||||||||||||    
T  46287474 tctagcacttactattttattggatgaaattaatatatgtcttactactttgtgtgtattcaattttcaaagtgttgactcacaatgatttaaaccaata 46287573  T
Q  234 agagagtgagtatt 247  Q
     || |||| |||||    
T  46287574 cgaaagtgggtatt 46287587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 129 - 253
Target Start/End: Original strand, 38636365 - 38636489
Alignment:
Q  129 cactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaac 228  Q
    ||||||| | |||||||||||||||| ||| ||||||||| ||||| ||| ||||| ||| |||  |||||| |||||||||| ||||||| ||||| |     
T  38636365 cactctccaccactcactcttttatttgataaaatcaatgtatgtctcactactttatgtgggtctaatttttaaagtgtagatccacaatgatttatat 38636464  T
Q  229 caataagagagtgagtattagagag 253  Q
    |||||||| | | | ||||||||||    
T  38636465 caataagaaaataaatattagagag 38636489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 131 - 210
Target Start/End: Original strand, 16178614 - 16178692
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtag 210  Q
    |||||||||||||||||||| ||||  ||||||||||| ||||||||||||||| ||| ||||| |||| ||||||||||    
T  16178614 ctctctagcactcactcttt-attgagtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtag 16178692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 128 - 231
Target Start/End: Complemental strand, 33996088 - 33995985
Alignment:
Q  128 acactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaa 227  Q
    |||||||||| || |||||||||||||  || ||||||||| ||||| ||||||||| ||| ||||||||||||||| | || || ||||||  ||||||    
T  33996088 acactctctaacattcactcttttattaaatcaaatcaatgtatgtctcaccactttttgtgggttcaattttcaaaatttaaactcacaatggtttaaa 33995989  T
Q  228 ccaa 231  Q
    ||||    
T  33995988 ccaa 33995985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 131 - 244
Target Start/End: Complemental strand, 2088815 - 2088701
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtaga-cccacaataatttaaacc 229  Q
    ||||||| |||||||||||| ||||  ||||||||||| ||||||||||||||| ||| | ||| |||| ||||||||||| ||  || |||||||| |     
T  2088815 ctctctaacactcactctttaattgagtgaaatcaatgtatgtcccaccactttatgtggattccatttccaaagtgtagatcctgcattaatttaagct 2088716  T
Q  230 aataagagagtgagt 244  Q
    ||||| |||||||||    
T  2088715 aataaaagagtgagt 2088701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 149 - 238
Target Start/End: Original strand, 4138913 - 4139002
Alignment:
Q  149 tttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagaga 238  Q
    |||||||||||||||||||| |||||||||||  || | | | ||| |||| |||||||||||| | |||||||||||| ||||||||||    
T  4138913 tttattggatgaaatcaatgtatgtcccaccatattttatggattctatttccaaagtgtagactcgcaataatttaaatcaataagaga 4139002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 97 - 236
Target Start/End: Original strand, 13519941 - 13520084
Alignment:
Q  97 aaagaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaa--tcaatgcatgtcccaccactttgtgtaggt 192  Q
    ||||||||||||||||    |||| |||| || |||||||  |||||||||| ||| ||||||| |||  |||||| |||| |||||||||||||  |||    
T  13519941 aaagaggaatgctagcgatactcatttttaaatactctctgtagcactcactatttaattggataaaaaatcaatgtatgttccaccactttgtgcgggt 13520040  T
Q  193 tcaattttcaaagtgtagacccacaataatttaaaccaataaga 236  Q
    ||  ||| ||| ||||| ||||||||| ||||||||||||||||    
T  13520041 tctgtttccaatgtgtatacccacaatgatttaaaccaataaga 13520084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 148 - 281
Target Start/End: Complemental strand, 38537649 - 38537511
Alignment:
Q  148 ttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaa---agtgtagacccacaataatttaaaccaataagagagtgagt 244  Q
    ||||||| ||||||||||||| |||||  || ||||||| |  |||||||||||||   ||||||||  || ||| ||||||| |||||| ||| ||| |    
T  38537649 ttttatttgatgaaatcaatgtatgtcttactactttgtatgagttcaattttcaacaaagtgtagattcataatgatttaaatcaataaaagaatgatt 38537550  T
Q  245 attagagagggtgttcaaaag--agtgttgctagcatta 281  Q
    ||||||||| |||||||||||  |||||||||| |||||    
T  38537549 attagagagagtgttcaaaagaaagtgttgctaacatta 38537511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 98 - 267
Target Start/End: Original strand, 39016658 - 39016830
Alignment:
Q  98 aagaggaatgctagcacctctcacttttcaacactctctag--cactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttca 195  Q
    ||||| |||||||||| |  || ||||| |||||||||||   |||| ||| ||||||||||||||||||||| ||||||||||| |||  || |||||     
T  39016658 aagagaaatgctagcaacattctcttttaaacactctctataacacttactattttattggatgaaatcaatgtatgtcccaccattttacgtgggttcc 39016757  T
Q  196 attttcaaagtgtag-acccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagag 267  Q
    |||| |||||||||| | | ||| | |||| | | ||||| ||||| |||  ||||||| |||||||||||||    
T  39016758 atttccaaagtgtagtatctacattgattttacctaataaaagagtaagtgctagagagagtgttcaaaagag 39016830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 131 - 267
Target Start/End: Original strand, 43958181 - 43958314
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaacca 230  Q
    |||||||||| |||||||||||||| ||  |||||||| ||||||||||| ||| ||| || || ||||||||  || |||  || | | ||||||||||    
T  43958181 ctctctagcattcactcttttattgaatagaatcaatgtatgtcccaccattttatgt-ggatctattttcaatatgcagaatcaaagtgatttaaacca 43958279  T
Q  231 ataagagagtgagtattagagagggtgttcaaaagag 267  Q
    |||||||||| ||||  |||||| |||||||||||||    
T  43958280 ataagagagtaagta--agagagagtgttcaaaagag 43958314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 281
Target Start/End: Original strand, 11895134 - 11895220
Alignment:
Q  198 tttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattag-agagggtgttcaaa--agagtgttgctagcatta 281  Q
    |||||||||||||||||||||| |||| ||| |||||||||||||||| ||| | |  |||||||||  ||||||||||||||||||    
T  11895134 tttcaaagtgtagacccacaatgatttgaacgaataagagagtgagtaatagaaaaaagtgttcaaaagagagtgttgctagcatta 11895220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 267
Target Start/End: Original strand, 51206079 - 51206210
Alignment:
Q  137 agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgta-gacccacaataatttaaaccaataag 235  Q
    ||||||||||| |||||| ||||||||||||| |||||||| |||||| |||  |||  ||||||||| |||| | || ||| | |||| | |||||||     
T  51206079 agcactcactcatttattagatgaaatcaatgtatgtcccatcactttatgtgagtttcattttcaaaatgtaggtcctacattgatttcacccaataaa 51206178  T
Q  236 agagtgagtattagagagggtgttcaaaagag 267  Q
    |||||||||  ||||||| ||| |||||||||    
T  51206179 agagtgagtgctagagagagtgctcaaaagag 51206210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 148 - 253
Target Start/End: Original strand, 34961699 - 34961801
Alignment:
Q  148 ttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtatt 247  Q
    ||||||||||||| ||||||| || |  ||||||||||| | ||||||||||||||| |  |||  ||||||||||||||| ||||| ||||||||||||    
T  34961699 ttttattggatgagatcaatgtatatttcaccactttgt-tgggttcaattttcaaaat--agagtcacaataatttaaactaataaaagagtgagtatt 34961795  T
Q  248 agagag 253  Q
    | ||||    
T  34961796 aaagag 34961801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 136 - 234
Target Start/End: Complemental strand, 49682936 - 49682838
Alignment:
Q  136 tagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataa 234  Q
    ||||| ||||| |||||| |||||||||||||| || || ||||||||| | |   |||||||||||||||||||| |||||   ||||||||||||||    
T  49682936 tagcattcacttttttatcggatgaaatcaatgtatatctcaccactttatttgaattcaattttcaaagtgtagagccacatcgatttaaaccaataa 49682838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 118 - 204
Target Start/End: Original strand, 50879471 - 50879559
Alignment:
Q  118 tcacttttcaacactct--ctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaa 204  Q
    |||||||| ||||||||  ||||||||||||||||||||| ||| |||  ||||||||||||||| ||| ||| ||||| |||| ||||    
T  50879471 tcacttttgaacactctttctagcactcactcttttattgaatggaattcatgcatgtcccaccattttatgtgggttctatttccaaa 50879559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 264
Target Start/End: Complemental strand, 52279348 - 52279276
Alignment:
Q  192 ttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaa 264  Q
    ||||||||||||||| |||||||||||| ||||| | ||||| |||||||| ||||||| || ||||| ||||    
T  52279348 ttcaattttcaaagtttagacccacaatgatttagatcaataggagagtgaatattagatagagtgtttaaaa 52279276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 165 - 267
Target Start/End: Original strand, 5545642 - 5545745
Alignment:
Q  165 aatgcatgtcccaccactttgtgtaggttcaattttcaaagtgta-gacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaa 263  Q
    |||| ||||||||||||||| ||| || || ||||||||| |||| |||||||| | |||||| | ||| | | ||| |||||||||||| |||||||||    
T  5545642 aatgtatgtcccaccactttatgtgggctccattttcaaaatgtaagacccacattgatttaagcaaattaaaaagtaagtattagagagagtgttcaaa 5545741  T
Q  264 agag 267  Q
    ||||    
T  5545742 agag 5545745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 152 - 267
Target Start/End: Complemental strand, 19937301 - 19937186
Alignment:
Q  152 attggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagag 251  Q
    |||||||  |||||||| ||||||||||| | | |||  |||| ||||||||||| |||| | ||||| ||| ||||||| || |||||||| |||| ||    
T  19937301 attggatacaatcaatgtatgtcccaccattatatgtgagttctattttcaaagtatagatcgacaatgattcaaaccaacaaaagagtgagaattaaag 19937202  T
Q  252 agggtgttcaaaagag 267  Q
    || ||||| |||||||    
T  19937201 agagtgtttaaaagag 19937186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 28304144 - 28304089
Alignment:
Q  153 ttggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgt 208  Q
    ||||||||||||||||||||||||||||||||  || || || |||||||||||||    
T  28304144 ttggatgaaatcaatgcatgtcccaccacttttagtggggtccattttcaaagtgt 28304089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 207
Target Start/End: Original strand, 11127794 - 11127859
Alignment:
Q  142 tcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttc-aattttcaaagtg 207  Q
    |||||||||||| |||||||||||||| |||| |||||||||||| | ||||| |||||||||||||    
T  11127794 tcactcttttatgggatgaaatcaatgtatgt-ccaccactttgtattggttctaattttcaaagtg 11127859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 21776995 - 21776942
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccacttt 184  Q
    ||||||| || ||||||||||||||||| ||||||||| |||||| ||||||||    
T  21776995 ctctctaacattcactcttttattggataaaatcaatgtatgtcctaccacttt 21776942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 131 - 210
Target Start/End: Original strand, 37315593 - 37315669
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtag 210  Q
    ||||||| |||||||||||||   || ||||||||||| ||||||||||||||| |||| |||  |||||||||| ||||    
T  37315593 ctctctaacactcactctttt---gggtgaaatcaatgtatgtcccaccactttatgtaagtttcattttcaaagcgtag 37315669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 131 - 168
Target Start/End: Complemental strand, 51206196 - 51206159
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatg 168  Q
    |||||||||||||||||||||||||| |||||||||||    
T  51206196 ctctctagcactcactcttttattgggtgaaatcaatg 51206159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 167
Target Start/End: Original strand, 40812067 - 40812103
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaat 167  Q
    |||||||||||||||||||||||||| ||||||||||    
T  40812067 ctctctagcactcactcttttattgggtgaaatcaat 40812103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 41278759 - 41278695
Alignment:
Q  140 actcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaa 204  Q
    ||||||||||||||||| | |||| |||| |||||| |||||||| ||| ||||| |||||||||    
T  41278759 actcactcttttattgggtaaaattaatgtatgtcctaccactttatgtgggttccattttcaaa 41278695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 163
Target Start/End: Original strand, 47237768 - 47237800
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaat 163  Q
    |||||||||||||||||||||||||||||||||    
T  47237768 ctctctagcactcactcttttattggatgaaat 47237800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 25719231 - 25719286
Alignment:
Q  221 atttaaaccaataagagagtgagtattagagagggtgttcaaaagagtgttgctag 276  Q
    |||| ||||||||||||||||||| || ||||| ||||  ||||||||||||||||    
T  25719231 atttcaaccaataagagagtgagtgtttgagagagtgtaaaaaagagtgttgctag 25719286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 167
Target Start/End: Original strand, 42862414 - 42862484
Alignment:
Q  99 agaggaatgctagcacctctcacttttcaacactct--ctagcactcactcttttattggatgaaatcaat 167  Q
    ||||||||||||||| | ||| ||||| | |||| |  |||||||||||||||||||||| ||||||||||    
T  42862414 agaggaatgctagcaacactctcttttgagcactatatctagcactcactcttttattgggtgaaatcaat 42862484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 230
Target Start/End: Complemental strand, 3783494 - 3783412
Alignment:
Q  148 ttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaacca 230  Q
    |||||||| || |||| |||| ||||||||| ||||||| ||| ||| ||||  ||  |||||| ||||||||||||||||||    
T  3783494 ttttattgtataaaattaatgtatgtcccacaactttgtatagattctatttctaagatgtagatccacaataatttaaacca 3783412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 248
Target Start/End: Complemental strand, 18421967 - 18421864
Alignment:
Q  143 cactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtga 242  Q
    |||| ||||||| ||||||||||||| ||||||||||||| |||||  ||| |||||| ||||| |  |   ||||| |||||||||||||| | |||||    
T  18421967 cacttttttattagatgaaatcaatgtatgtcccaccactgtgtgt--gtttaatttttaaagtatgtatttacaatgatttaaaccaataaaaaagtga 18421870  T
Q  243 gtatta 248  Q
     |||||    
T  18421869 atatta 18421864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 145 - 281
Target Start/End: Original strand, 35179653 - 35179792
Alignment:
Q  145 ctcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagt---gtagacccacaataatttaaaccaataagagagtg 241  Q
    ||||||||| |||||||||||||| ||||  ||| |||||  || ||||||| |||||||||   ||||||| ||||| ||||| || ||||| ||||||    
T  35179653 ctcttttatcggatgaaatcaatgtatgtttcactactttacgtgggttcaa-tttcaaagtgtagtagacctacaatgatttatactaataatagagtg 35179751  T
Q  242 agtattagagagggtgttcaaa-agagtgttgctagcatta 281  Q
    | ||||| |||  ||||  ||| ||||||||| ||||||||    
T  35179752 aatattaaagatagtgtcaaaagagagtgttgttagcatta 35179792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 168
Target Start/End: Complemental strand, 37315749 - 37315676
Alignment:
Q  97 aaagaggaatgctagcacctctcacttttcaacactctc--tagcactcactcttttattggatgaaatcaatg 168  Q
    ||||| ||||||||||| | |||  |||| | |||||||  ||||||||||||||||||||| |||||||||||    
T  37315749 aaagatgaatgctagcaacactcttttttgagcactctcattagcactcactcttttattgggtgaaatcaatg 37315676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 184
Target Start/End: Original strand, 48608121 - 48608163
Alignment:
Q  142 tcactcttttattggatgaaatcaatgcatgtcccaccacttt 184  Q
    ||||||||||||||||| |||| |||| |||||||||||||||    
T  48608121 tcactcttttattggataaaattaatgtatgtcccaccacttt 48608163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 168
Target Start/End: Complemental strand, 16178736 - 16178699
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatg 168  Q
    ||||||| | ||||||||||||||||||||||||||||    
T  16178736 ctctctaactctcactcttttattggatgaaatcaatg 16178699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 44832496 - 44832569
Alignment:
Q  134 tctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtg 207  Q
    |||| |||||||| ||||||||| |||||| |||| ||||||||||| ||| ||| | ||| |||| |||||||    
T  44832496 tctatcactcacttttttattgggtgaaattaatgtatgtcccaccattttatgtggattccatttccaaagtg 44832569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 186
Target Start/End: Complemental strand, 1559883 - 1559812
Alignment:
Q  117 ctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgt 186  Q
    |||||||||  |||||||||  ||||||||||| ||||||| ||| |||||| | ||||||||||| |||||    
T  1559883 ctcacttttgtacactctctttagcactcactcctttattgaatggaatcaacgtatgtcccaccaatttgt 1559812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 238 - 281
Target Start/End: Original strand, 11127856 - 11127900
Alignment:
Q  238 agtgagtattagagagggtgttc-aaaagagtgttgctagcatta 281  Q
    ||||||||||||||||||||||| |||||||||||| ||| ||||    
T  11127856 agtgagtattagagagggtgttcaaaaagagtgttgataggatta 11127900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 44832650 - 44832579
Alignment:
Q  99 agaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatg 168  Q
    ||||||||||||||| | ||| ||||| | ||||||||  |||||||| | ||||||||| |||||||||||    
T  44832650 agaggaatgctagcaacactctcttttgagcactctctccagcactcatttttttattgggtgaaatcaatg 44832579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 112; Significance: 2e-56; HSPs: 70)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 100 - 281
Target Start/End: Complemental strand, 26767944 - 26767759
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaaca--ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    |||||||||||||| | ||||||||||||||  |||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||  ||||||||    
T  26767944 gaggaatgctagcaacactcacttttcaacattctctctagcacttactcttttactggatgaaatcaatgtatgtcccaccactttgtgagggttcaat 26767845  T
Q  198 tttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaag--agtgttgctagcatta 281  Q
    ||||||| ||||||| |||||| |||||||||||||| ||||||||||||||| || |||||||||||  ||||||||||||||||    
T  26767844 tttcaaattgtagactcacaatgatttaaaccaataaaagagtgagtattagatagagtgttcaaaagaaagtgttgctagcatta 26767759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 96 - 279
Target Start/End: Original strand, 9470074 - 9470260
Alignment:
Q  96 aaaagaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggtt 193  Q
    ||||||| ||||||||||   |||| |||||||| ||||||  | |||||||||||||||||||||||||||||| ||||||||||||||||| | ||||    
T  9470074 aaaagagaaatgctagcaatactcatttttcaacgctctctctaacactcactcttttattggatgaaatcaatgtatgtcccaccactttgtttgggtt 9470173  T
Q  194 caattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttc--aaaagagtgttgctagcat 279  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||  || ||||||||||||||||    
T  9470174 caattttcaaagtgtagacccacaatgatttaaaccaataagagagtgaatattagagagggt-ttcagaagagagtgttgctagcat 9470260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 100 - 278
Target Start/End: Original strand, 12989188 - 12989370
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctctagc--actcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    |||||||||||||| | ||||||||||||||||||||  |  ||||||||||| ||||||||||||||||| ||||||||||||||||| | | ||| ||    
T  12989188 gaggaatgctagcaacactcacttttcaacactctctttctcactcactctttcattggatgaaatcaatgtatgtcccaccactttgtatggattctat 12989287  T
Q  198 tttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagca 278  Q
    || | ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||    
T  12989288 ttccgaagtgtagacccacaatgatttaaaccaataagagagtgagtattagagagagtgttcaaaagagagtgttgctagca 12989370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 104 - 281
Target Start/End: Complemental strand, 6980299 - 6980118
Alignment:
Q  104 aatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttc 201  Q
    |||||||||| |  |||||||||||||||||||  |||||||||||||||||||||||||||||| | |||| | ||||||||||||  |||||||||||    
T  6980299 aatgctagcaacattcacttttcaacactctctctagcactcactcttttattggatgaaatcaaggtatgttctaccactttgtgtgagttcaattttc 6980200  T
Q  202 aaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagcatta 281  Q
    ||||| |||||||||||| |||| ||| |||||||||||||||||||||||  |||||||||  |||||||||| |||||||    
T  6980199 aaagtatagacccacaatgatttcaactaataagagagtgagtattagagaaagtgttcaaaagagagtgttgcaagcatta 6980118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 103 - 267
Target Start/End: Original strand, 45554567 - 45554725
Alignment:
Q  103 gaatgctagcacctctcacttttcaacactct--ctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaatttt 200  Q
    ||||||||||| | ||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||        |||||||    
T  45554567 gaatgctagcaacactcacttttcaacactctctctagcactcactcttttattggatgaaatcaatgtatgtcccaccactttg--------caatttt 45554658  T
Q  201 caaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagag 267  Q
    | ||||||||||||||||| |||||||||||||||| ||||||||||||||||  ||||||||||||    
T  45554659 ccaagtgtagacccacaatgatttaaaccaataagaaagtgagtattagagagaatgttcaaaagag 45554725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 96 - 278
Target Start/End: Original strand, 10981511 - 10981695
Alignment:
Q  96 aaaagaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggtt 193  Q
    |||||||||||| || ||   ||||||||| ||||||||||  | |||||||| || ||||| ||||||  |||| ||||||||||||||||||| ||||    
T  10981511 aaaagaggaatgataacaaaactcacttttgaacactctctctaacactcacttttctattgaatgaaaaaaatgtatgtcccaccactttgtgtgggtt 10981610  T
Q  194 caattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagagtgttgctagca 278  Q
    | |||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||| | |||||| | |||||||||||||||    
T  10981611 ctatttccaatgtgtagacccacaatgatttaaaccaataagagagtgagtattagagggagtgttctagagagtgttgctagca 10981695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 118 - 267
Target Start/End: Original strand, 38464178 - 38464329
Alignment:
Q  118 tcacttttcaacactctctagcac--tcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagaccca 215  Q
    |||||||||||||||||||   ||  | ||| |||||||| |||||||||||| ||||| || ||||||| || ||||||||||||||||||||||||||    
T  38464178 tcacttttcaacactctctctgacaattacttttttattgtatgaaatcaatgtatgtctcatcactttgcgtgggttcaattttcaaagtgtagaccca 38464277  T
Q  216 caataatttaaaccaataagagagtgagtattagagagggtgttcaaaagag 267  Q
    |||| |||||||||||||||||||| |||||||||||| |||||||||||||    
T  38464278 caatgatttaaaccaataagagagtaagtattagagagagtgttcaaaagag 38464329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 131 - 253
Target Start/End: Original strand, 44274264 - 44274386
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaacca 230  Q
    ||||||| || ||||||||| ||||||| ||||||||| ||||||||||||||||||| ||||||| |||||||||||||| ||||||| ||||||||||    
T  44274264 ctctctaacattcactctttcattggataaaatcaatgtatgtcccaccactttgtgtgggttcaactttcaaagtgtagatccacaatgatttaaacca 44274363  T
Q  231 ataagagagtgagtattagagag 253  Q
    |||| ||||||||| ||||||||    
T  44274364 ataacagagtgagtgttagagag 44274386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 100 - 267
Target Start/End: Original strand, 11539420 - 11539592
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactct--ctagcactcactcttttattggatgaaatcaat--gcatgtcccaccactttgtgtaggttca 195  Q
    ||||||||||| || | |||| |||| ||||||||  |||||||||||||||||||||||||||||||||  | |||| ||| ||||||||||  ||||     
T  11539420 gaggaatgctaacaacactcatttttgaacactctttctagcactcactcttttattggatgaaatcaatatgtatgttccatcactttgtgtgagttct 11539519  T
Q  196 attttcaaagtgtagacccacaata-atttaaaccaataagagagtgagtattagagagggtgttcaaaagag 267  Q
    |||||||||||||||| ||| |||  ||||||||||||||||||||||||||||||||| ||||  |||||||    
T  11539520 attttcaaagtgtagatccagaattgatttaaaccaataagagagtgagtattagagagagtgtgtaaaagag 11539592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 100 - 266
Target Start/End: Original strand, 19639090 - 19639258
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    ||||||||||| || | ||||||||| ||||||||||  |||| ||||| ||||||| ||||||||||||| ||||| || ||| | ||||  |||||||    
T  19639090 gaggaatgctaacagcgctcactttttaacactctctccagcattcactattttattagatgaaatcaatgtatgtctcatcacatagtgtgagttcaat 19639189  T
Q  198 tttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaaga 266  Q
    |||||||||| ||||| ||||| |||||||||||||||||||||| ||||| ||||| | |||||||||    
T  19639190 tttcaaagtgcagacctacaatgatttaaaccaataagagagtgaatattatagaggctattcaaaaga 19639258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 100 - 266
Target Start/End: Original strand, 19837683 - 19837851
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    ||||||||||| || | ||||||||| ||||||||||  |||| ||||| ||||||| ||||||||||||| ||||| || ||| | ||||  |||||||    
T  19837683 gaggaatgctaacagcgctcactttttaacactctctccagcattcactattttattagatgaaatcaatgtatgtctcatcacatagtgtgagttcaat 19837782  T
Q  198 tttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaaga 266  Q
    |||||||||| ||||| ||||| |||||||||||||||||||||| ||||| ||||| | |||||||||    
T  19837783 tttcaaagtgcagacctacaatgatttaaaccaataagagagtgaatattatagaggctattcaaaaga 19837851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 139 - 267
Target Start/End: Original strand, 15884471 - 15884595
Alignment:
Q  139 cactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagaga 238  Q
    |||| |||||||||||||| ||||||||||    |||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||| |    
T  15884471 cacttactcttttattggacgaaatcaatg----tcccaccactttgtgtgggttcaattttcaaaatgtagacccacaattatttaaaccaataagata 15884566  T
Q  239 gtgagtattagagagggtgttcaaaagag 267  Q
     |||||||||||||  ||| |||||||||    
T  15884567 atgagtattagagattgtggtcaaaagag 15884595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 100 - 235
Target Start/End: Complemental strand, 18511392 - 18511255
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctc--tagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    |||||||||||||| | ||||||||| |||||||||  || |||||||||||||||||||| ||||||||| ||||||||| | ||| ||| ||||||||    
T  18511392 gaggaatgctagcaacactcactttttaacactctcactatcactcactcttttattggataaaatcaatgtatgtcccactattttatgtgggttcaat 18511293  T
Q  198 tttcaaagtgtagacccacaataatttaaaccaataag 235  Q
    |||||||||| ||||| |||||  ||||||||||||||    
T  18511292 tttcaaagtgaagacctacaatgttttaaaccaataag 18511255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 100 - 280
Target Start/End: Complemental strand, 32856322 - 32856134
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctcta------gcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggtt 193  Q
    ||||||||||| || | ||||||||| ||||||||||       ||||| |||||||||| ||||||||| |||  ||||  ||||||||||||| ||||    
T  32856322 gaggaatgctaacaacactcacttttgaacactctctccagtacgcactgactcttttatcggatgaaattaatatatgtttcaccactttgtgtgggtt 32856223  T
Q  194 caattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagcatt 280  Q
     ||||||||||||||||| ||| | | |||||||||||||||||| ||||||||||| ||||||||||||  |||||||||||| ||||    
T  32856222 gaattttcaaagtgtagatccatagtgatttaaaccaataagagattgagtattagaaagggtgttcaaaatagagtgttgctaacatt 32856134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 104 - 248
Target Start/End: Original strand, 3804585 - 3804732
Alignment:
Q  104 aatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtccc-accactttgtgtaggttcaatttt 200  Q
    |||||||||  | ||||||||||||||||||||  | || ||||||||||||||||||||||||||| ||||||| | |||||| |||||||| ||||||    
T  3804585 aatgctagctacactcacttttcaacactctctttaacattcactcttttattggatgaaatcaatgtatgtccccatcactttatgtaggtttaatttt 3804684  T
Q  201 caaagtgtagacccacaataatttaaaccaataagagagtgagtatta 248  Q
    ||||||||| |||||||||||||||||  ||||| | ||| |||||||    
T  3804685 caaagtgtacacccacaataatttaaattaataaaatagtaagtatta 3804732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 100 - 281
Target Start/End: Complemental strand, 36472021 - 36471836
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctctag--cactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    |||||||| ||| | | ||||||||||||||||||||    |||||| ||| ||||||||||||||||| | ||||| ||||||||| | | | ||||||    
T  36472021 gaggaatgatagtaacactcacttttcaacactctctctgacactcaatctcttattggatgaaatcaaagtatgtctcaccactttttatggattcaat 36471922  T
Q  198 tttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaa--gagtgttgctagcatta 281  Q
    ||||||| |||| || |||||| |||||||||||||| |||||||||||||||||| || || ||||  |||| ||||||||||||    
T  36471921 tttcaaaatgtaaactcacaatgatttaaaccaataaaagagtgagtattagagagagtcttaaaaaaggagttttgctagcatta 36471836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 122 - 281
Target Start/End: Complemental strand, 35316560 - 35316399
Alignment:
Q  122 ttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataa 221  Q
    ||||||||| ||||||  ||||||||||||||| ||| |||| |||| ||||||||||| ||| ||| | ||||||||| ||| |||||||||||||| |    
T  35316560 ttttcaacattctctattactcactcttttattagataaaattaatgtatgtcccaccattttatgttgattcaatttttaaattgtagacccacaatga 35316461  T
Q  222 tttaaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagcatta 281  Q
    |||||| |||||||||||||||||| | | || ||| |||||  |||||||| |||||||||    
T  35316460 tttaaatcaataagagagtgagtatcataaagagtgctcaaaagagagtgttactagcatta 35316399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 95 - 212
Target Start/End: Original strand, 2476528 - 2476645
Alignment:
Q  95 aaaaagaggaatgctagcacctctcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttc 194  Q
    ||||||||||||||||  | | |||||||||||||| ||||||||||| ||||||||||| ||| ||||||||| ||||||||| ||||||||||  |||    
T  2476528 aaaaagaggaatgctactaacactcacttttcaacattctctagcacttactcttttattagataaaatcaatgtatgtcccactactttgtgtaacttc 2476627  T
Q  195 aattttcaaagtgtagac 212  Q
    |||||||||| |||||||    
T  2476628 aattttcaaaatgtagac 2476645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 104 - 233
Target Start/End: Complemental strand, 16719609 - 16719478
Alignment:
Q  104 aatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttc 201  Q
    |||||||||| | |||||||||||||||| |||  |||||  ||||||||||| ||||||||||||| || |||||||| ||  ||||||||||||||||    
T  16719609 aatgctagcaacactcacttttcaacactgtctttagcacatactcttttattagatgaaatcaatgtatatcccaccatttcatgtaggttcaattttc 16719510  T
Q  202 aaagtgtagacccacaataatttaaaccaata 233  Q
    ||| ||||||||| |||| |||||||||||||    
T  16719509 aaaatgtagacccgcaatgatttaaaccaata 16719478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 100 - 247
Target Start/End: Original strand, 17188064 - 17188211
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattt 199  Q
    |||||||| || || | ||||||||||||| ||||||| |||||||| |||||||||||||||||||||  | || |||||||||||||    |||||||    
T  17188064 gaggaatgttaccaacactcacttttcaactctctctatcactcactattttattggatgaaatcaatgtgtatctcaccactttgtgtgaactcaattt 17188163  T
Q  200 tcaaagtgtagacccacaataatttaaaccaataagagagtgagtatt 247  Q
    ||||||||||| |||| ||| |||||||||||||| | | ||||||||    
T  17188164 tcaaagtgtaggcccagaatgatttaaaccaataaaataatgagtatt 17188211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 103 - 248
Target Start/End: Complemental strand, 34142319 - 34142172
Alignment:
Q  103 gaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaatttt 200  Q
    ||||| ||||| | || ||||||||||| |||||  | || ||||| ||||||||||||||||  ||| ||||| ||| ||||||||| |||||||||||    
T  34142319 gaatgttagcaacacttacttttcaacaatctctcaaacattcacttttttattggatgaaattcatgtatgtctcactactttgtgtgggttcaatttt 34142220  T
Q  201 caaagtgtagacccacaataatttaaaccaataagagagtgagtatta 248  Q
    |||||||||||  ||||||  ||||||||||||||||||||| |||||    
T  34142219 caaagtgtagagtcacaatggtttaaaccaataagagagtgaatatta 34142172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 131 - 280
Target Start/End: Complemental strand, 28898187 - 28898035
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtaga-cccacaataatttaaacc 229  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||| ||||  |||| ||||||||||| || ||| | |||| | ||    
T  28898187 ctctctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggtttcatttccaaagtgtagatcctacattgatttcatcc 28898088  T
Q  230 aataagagagtgagtattagagagggtgttcaaa--agagtgttgctagcatt 280  Q
    ||||| |||||||||  || |||| ||  |||||  |||||||||||||||||    
T  28898087 aataaaagagtgagtgctaaagagagtactcaaaagagagtgttgctagcatt 28898035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 131 - 267
Target Start/End: Complemental strand, 30718476 - 30718341
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaacca 230  Q
    |||||||| ||||||||||||||||||||||||| ||  |||||| | || ||||||| | ||  ||||||||||||||||| |||||| ||||||||||    
T  30718476 ctctctagtactcactcttttattggatgaaatcgatatatgtcc-atcattttgtgtggattgtattttcaaagtgtagactcacaatgatttaaacca 30718378  T
Q  231 ataagagagtgagtattagagagggtgttcaaaagag 267  Q
    |||| | ||||| |||||||||| ||||  |||||||    
T  30718377 ataaaaaagtgaatattagagagagtgtctaaaagag 30718341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 136 - 263
Target Start/End: Complemental strand, 37652390 - 37652263
Alignment:
Q  136 tagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataag 235  Q
    ||||||| ||| ||||||| ||||||||||||| |||| ||||| ||||||||| ||||||||| ||| |||||||  |||||| ||||||||||||||     
T  37652390 tagcacttacttttttattagatgaaatcaatgtatgttccacccctttgtgtatgttcaatttccaacgtgtagattcacaatgatttaaaccaataaa 37652291  T
Q  236 agagtgagtattagagagggtgttcaaa 263  Q
    | ||||| ||| ||||||  ||||||||    
T  37652290 aaagtgaatataagagagaatgttcaaa 37652263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 131 - 210
Target Start/End: Original strand, 42182919 - 42182998
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtag 210  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||| ||||| |||| ||||||||||    
T  42182919 ctctctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtag 42182998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 170 - 240
Target Start/End: Complemental strand, 7919381 - 7919311
Alignment:
Q  170 atgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagt 240  Q
    ||||||||||||||||||| | |||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  7919381 atgtcccaccactttgtgtggattcaattttcaaagtgtagatccacaatgatttaaaccaataagagagt 7919311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 27494584 - 27494480
Alignment:
Q  148 ttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtatt 247  Q
    |||||||||||||||||||||  ||| |||||| ||| | |||||||| |||||||||  ||||||| |||| ||||||| |||||| ||||||||||||    
T  27494584 ttttattggatgaaatcaatgtttgttccaccaatttatataggttcacttttcaaagcatagacccgcaatgatttaaatcaataaaagagtgagtatt 27494485  T
Q  248 agaga 252  Q
    |||||    
T  27494484 agaga 27494480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 100 - 281
Target Start/End: Complemental strand, 12099050 - 12098866
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    |||||||| ||||| | ||| |||||||||  |||||  |||| || || ||||||| ||||||||||| | ||||| | ||||||||| |  |||||||    
T  12099050 gaggaatgttagcaacactctcttttcaactttctctttagcattcgctattttatttgatgaaatcaaagtatgtctcgccactttgtatgagttcaat 12098951  T
Q  198 tttcaaagtgtagacccac-aataatttaaaccaataagagagtgagtattagagagggtgttcaaa-agagtgttgctagcatta 281  Q
    |||||||||||| || ||| ||| |||||||| ||||||||||||||||||| |||| || | |||| ||| ||||||||||||||    
T  12098950 tttcaaagtgtaaactcacaaatgatttaaactaataagagagtgagtattaaagagtgt-tccaaatagaatgttgctagcatta 12098866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 131 - 267
Target Start/End: Complemental strand, 4964823 - 4964686
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgta-gacccacaataatttaaacc 229  Q
    |||||||||||||||| ||||||||| ||||||||||| ||||||||||||||| ||| | ||  |||||||||||||| | || ||| | || | | ||    
T  4964823 ctctctagcactcacttttttattgggtgaaatcaatgtatgtcccaccactttatgtggatttcattttcaaagtgtaggtcctacattgatcttatcc 4964724  T
Q  230 aataagagagtgagtattagagagggtgttcaaaagag 267  Q
    ||||| |||||||||  ||||||| || ||||||||||    
T  4964723 aataaaagagtgagtgctagagagagtattcaaaagag 4964686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 144 - 248
Target Start/End: Original strand, 32701513 - 32701617
Alignment:
Q  144 actcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgag 243  Q
    ||||||||||||||| ||||||||| || |||||||||||| |||| |||||||||| || ||||| | ||| ||| |||||||||||||| | ||| ||    
T  32701513 actcttttattggataaaatcaatgtatatcccaccactttatgtatgttcaatttttaacgtgtaaatccataatgatttaaaccaataaaaaagtaag 32701612  T
Q  244 tatta 248  Q
    |||||    
T  32701613 tatta 32701617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 148 - 281
Target Start/End: Original strand, 43414402 - 43414536
Alignment:
Q  148 ttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtatt 247  Q
    ||||||||||||||||||||| |||| | |||| |||| ||| || | ||||||| ||| |||| ||||||| ||||||||||| ||||| |||||||||    
T  43414402 ttttattggatgaaatcaatgtatgttctaccattttgcgtaagtgctattttcagagtatagatccacaatgatttaaaccaagaagagggtgagtatt 43414501  T
Q  248 agagagggtgttcaaa---agagtgttgctagcatta 281  Q
    || ||  |||||||||   ||||||||| ||||||||    
T  43414502 agtga--gtgttcaaaaagagagtgttgatagcatta 43414536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 100 - 211
Target Start/End: Original strand, 15508911 - 15509024
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactct--ctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    |||||||| ||||| | ||| ||||| ||||||||  ||| |||||||||||||||||  ||||||||||| ||||||||||| ||| ||| ||||| ||    
T  15508911 gaggaatgttagcaacactctcttttgaacactctttctaacactcactcttttattgagtgaaatcaatgtatgtcccaccattttttgtgggttccat 15509010  T
Q  198 tttcaaagtgtaga 211  Q
    || |||||||||||    
T  15509011 ttccaaagtgtaga 15509024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 100 - 259
Target Start/End: Complemental strand, 33678298 - 33678138
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctctag--cactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    |||||||||||||| | ||||||||| |||||||| ||   |||| | ||||| |||| |||||||||||| ||| || ||||| | | || ||||| ||    
T  33678298 gaggaatgctagcaacactcacttttgaacactctttataacacttattctttaattgaatgaaatcaatgtatgcccaaccacat-gcgtgggttctat 33678200  T
Q  198 tttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgtt 259  Q
    ||  || |||||||| ||||||||||||||||||||| | ||||| |||||||||| |||||    
T  33678199 ttcaaatgtgtagactcacaataatttaaaccaataaaaaagtgaatattagagagtgtgtt 33678138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 131 - 275
Target Start/End: Original strand, 1110228 - 1110375
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgta-gacccacaataatttaaacc 229  Q
    ||||||| |||||||||||||||||  ||||||||||| ||||||||||||||| ||| ||||| |||| |||||| || | || ||| | |||| | ||    
T  1110228 ctctctaacactcactcttttattgagtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtatatgtcctacattgatttcaccc 1110327  T
Q  230 aataagagagtgagtattagagagggtgttc--aaaagagtgttgcta 275  Q
    ||||| ||||||| | ||||| || ||| ||  |||||||||||||||    
T  1110328 aataaaagagtgaatgttagaaagagtgctcaaaaaagagtgttgcta 1110375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 19427432 - 19427360
Alignment:
Q  96 aaaagaggaatgctagcacctctcacttttcaacactctctagcactcactcttttattggatgaaatcaatg 168  Q
    |||||| ||||||||||| | ||| ||||| |||||||||||||||||||||| | |||||||||||||||||    
T  19427432 aaaagaagaatgctagcaacactctctttttaacactctctagcactcactctatcattggatgaaatcaatg 19427360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 267
Target Start/End: Complemental strand, 24895444 - 24895280
Alignment:
Q  104 aatgctagcacctctcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaa 203  Q
    |||||||||| | ||| |||||  ||| ||||||  ||||||||||||| ||||| ||||||||| || | |||||| ||| |||  |||| |||| |||    
T  24895444 aatgctagcaacactctcttttggacagtctctaatactcactcttttaatggataaaatcaatgtatattccaccattttatgtgagttccatttccaa 24895345  T
Q  204 agtgta-gacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagag 267  Q
    |||||| |||||||| | |||||| ||||| | ||||||||| |||||||| || | ||||||||    
T  24895344 agtgtatgacccacattgatttaacccaatgaaagagtgagtgttagagagagtatccaaaagag 24895280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 148 - 267
Target Start/End: Complemental strand, 25238411 - 25238291
Alignment:
Q  148 ttttattggatgaaatcaatgcatgtcccaccactt-tgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtat 246  Q
    ||||||| ||| ||||||||| ||||| || ||||| | ||| ||||| |||||||||||||||| ||||||| |||||||||||||| | |||||||      
T  25238411 ttttattagataaaatcaatgtatgtctcatcacttctttgtgggttctattttcaaagtgtagatccacaatgatttaaaccaataaaaaagtgagtgc 25238312  T
Q  247 tagagagggtgttcaaaagag 267  Q
    ||||||  ||||| |||||||    
T  25238311 tagagaaagtgtttaaaagag 25238291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 196 - 276
Target Start/End: Complemental strand, 4552925 - 4552843
Alignment:
Q  196 attttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaa--gagtgttgctag 276  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| |   |||||||||  ||||||||||||    
T  4552925 attttcaatgtgtagacccacaatgatttaaaccaataagagagtgagtatcagaaaaaatgttcaaaagtgagtgttgctag 4552843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 180 - 266
Target Start/End: Complemental strand, 472264 - 472178
Alignment:
Q  180 actttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaaga 266  Q
    |||||||||  |||||||||||||| | || | ||||||| ||||||||||||||||||| |||||||| |||| ||| ||||||||    
T  472264 actttgtgtgagttcaattttcaaaatatatatccacaatgatttaaaccaataagagagcgagtattaaagagagtgctcaaaaga 472178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 194 - 252
Target Start/End: Complemental strand, 14489626 - 14489568
Alignment:
Q  194 caattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagaga 252  Q
    ||||||| |||||||||| |||||||||||||||||||||| ||| |||||||||||||    
T  14489626 caatttttaaagtgtagatccacaataatttaaaccaataaaagaatgagtattagaga 14489568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 31494211 - 31494289
Alignment:
Q  106 tgctagcacctctcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccacttt 184  Q
    |||||||| | ||| ||||||||||||||||| |||||||||| |||||||||||||  |||| ||||||||| |||||    
T  31494211 tgctagcaacactctcttttcaacactctctaacactcactctcttattggatgaaaataatgtatgtcccactacttt 31494289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 1107068 - 1107121
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccacttt 184  Q
    ||||||||||| |||||||||||||| ||||||||||| |||||||||||||||    
T  1107068 ctctctagcacccactcttttattgggtgaaatcaatgtatgtcccaccacttt 1107121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 140 - 259
Target Start/End: Complemental strand, 4603008 - 4602890
Alignment:
Q  140 actcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaacc-aataagaga 238  Q
    ||||||||||||||||||||||||||||  |||| ||| |||||||| |  |||||||||| |||||| ||||| | ||| |||||||||    ||||||    
T  4603008 actcactcttttattggatgaaatcaatatatgttccatcactttgttt--gttcaatttttaaagtgcagacctataatgatttaaaccgccaaagaga 4602911  T
Q  239 gtgagtattagagagggtgtt 259  Q
    |||| |||||||||| |||||    
T  4602910 gtgactattagagagagtgtt 4602890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 148 - 253
Target Start/End: Original strand, 24497239 - 24497344
Alignment:
Q  148 ttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtatt 247  Q
    |||||||||||||||  |||| |||| ||| || ||||||| | ||  |||||||||||||||||| | | | |||||||| |||| |||||||||||||    
T  24497239 ttttattggatgaaactaatgtatgttccatcattttgtgtggattttattttcaaagtgtagaccaagagtgatttaaactaataggagagtgagtatt 24497338  T
Q  248 agagag 253  Q
    ||||||    
T  24497339 agagag 24497344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 37228528 - 37228605
Alignment:
Q  131 ctctctagcactcactcttttattggatg-aaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtg 207  Q
    |||||||||||||||||||||||||| || |||| |||| ||||||||||||||| ||| |||||  |||||||||||    
T  37228528 ctctctagcactcactcttttattgggtgaaaattaatgtatgtcccaccactttatgtgggttccgttttcaaagtg 37228605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 140 - 267
Target Start/End: Original strand, 6315697 - 6315825
Alignment:
Q  140 actcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgta-gacccacaataatttaaaccaataagaga 238  Q
    ||||||| ||||| ||||||||||||||| |||| |||||||||| | ||||||| |||| ||||||||| | || ||| ||||||   ||||||| |||    
T  6315697 actcacttttttactggatgaaatcaatgtatgttccaccactttatataggttccatttccaaagtgtaggtcctacattaattttttccaataaaaga 6315796  T
Q  239 gtgagtattagagagggtgttcaaaagag 267  Q
    |||| ||||| | || ||| |||||||||    
T  6315797 gtgaatattaaaaagagtgctcaaaagag 6315825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 20951599 - 20951671
Alignment:
Q  96 aaaagaggaatgctagcacctctcacttttcaacactctctagcactcactcttttattggatgaaatcaatg 168  Q
    |||||||||||||||||| | ||| ||||| | |||||||||||||| | ||||||||||| |||||||||||    
T  20951599 aaaagaggaatgctagcaacactctcttttgagcactctctagcacttattcttttattgggtgaaatcaatg 20951671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 210
Target Start/End: Complemental strand, 31395628 - 31395516
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    |||||||| ||||| | ||| ||||| | ||||||||  ||||||||||| |||||||| ||||||||||| ||||||| ||||||| ||| | ||| ||    
T  31395628 gaggaatgttagcaacactctcttttgagcactctctttagcactcactcctttattgggtgaaatcaatgtatgtccctccactttatgtggattccat 31395529  T
Q  198 tttcaaagtgtag 210  Q
    || || |||||||    
T  31395528 ttccatagtgtag 31395516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 98 - 168
Target Start/End: Original strand, 37719829 - 37719901
Alignment:
Q  98 aagaggaatgctagcacctctcacttttcaacactct--ctagcactcactcttttattggatgaaatcaatg 168  Q
    |||||||||||||||| |  || ||||| | ||||||  ||||||||||||||||||||||||||||||||||    
T  37719829 aagaggaatgctagcaacattctcttttgagcactctttctagcactcactcttttattggatgaaatcaatg 37719901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 139 - 184
Target Start/End: Complemental strand, 41805918 - 41805873
Alignment:
Q  139 cactcactcttttattggatgaaatcaatgcatgtcccaccacttt 184  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||    
T  41805918 cactcactcttttattggataaaatcaatgtatgtcccaccacttt 41805873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 248
Target Start/End: Original strand, 30849284 - 30849384
Alignment:
Q  148 ttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtatt 247  Q
    ||||||| ||||||||||||| | ||||||||| ||||| | ||||| ||||| ||||  || | ||||||| ||||||| |||||||| |||| |||||    
T  30849284 ttttattagatgaaatcaatgtacgtcccaccaatttgtatgggttctatttttaaaggataaatccacaatgatttaaatcaataagaaagtgcgtatt 30849383  T
Q  248 a 248  Q
    |    
T  30849384 a 30849384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 120 - 248
Target Start/End: Complemental strand, 25730602 - 25730472
Alignment:
Q  120 acttttcaacactct--ctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccaca 217  Q
    |||||| ||||||||  ||| |||||||| |||||||||||| |||  ||| ||||| |||||  || ||| ||||| ||||| || ||||| || ||||    
T  25730602 acttttgaacactctttctaacactcacttttttattggatggaatacatgtatgtctcaccatattatgtgggttctatttttaacgtgtaaactcaca 25730503  T
Q  218 ataatttaaaccaataagagagtgagtatta 248  Q
     | |||||||||||||| ||||||| |||||    
T  25730502 gtgatttaaaccaataaaagagtgaatatta 25730472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 276
Target Start/End: Original strand, 2122792 - 2122972
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacact--ctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    |||| ||||||||| | |||||||||||| |||  ||||| || ||||||||| || |||||||||||||| ||||  ||||||||||| |   ||| ||    
T  2122792 gaggtatgctagcaacactcacttttcaatactttctctatcaatcactctttcataggatgaaatcaatgtatgtatcaccactttgtatgcattctat 2122891  T
Q  198 tttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttc--aaaagagtgttgctag 276  Q
    ||  | ||||||    ||| || ||||||| |||||||||||||||||  |||||   |||||  ||||||||||||||||    
T  2122892 ttctagagtgtaagttcactatgatttaaatcaataagagagtgagtaccagagaaaatgttcaaaaaagagtgttgctag 2122972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 139 - 281
Target Start/End: Original strand, 19953433 - 19953578
Alignment:
Q  139 cactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgt-agacccacaataatttaaaccaataagag 237  Q
    |||||| ||||||||||||||||| ||||| ||| |||||||||||  || |   | |||| |||||||| |||| ||| || |||||| ||||||| |     
T  19953433 cactcattcttttattggatgaaaccaatgtatgacccaccactttaagtggaacccatttccaaagtgtgagactcactatgatttaatccaataaaaa 19953532  T
Q  238 agtgagtattagagagggtgttcaaa--agagtgttgctagcatta 281  Q
    |||||||||| ||||   |||| |||  ||||||||||||||||||    
T  19953533 agtgagtattggagaaaatgttaaaaagagagtgttgctagcatta 19953578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 253
Target Start/End: Original strand, 38104295 - 38104401
Alignment:
Q  148 ttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgta-gacccacaataatttaaaccaataagagagtgagtat 246  Q
    ||||||||||| ||||||||| |||| |||||||||| | | ||||| |||  ||||||||| |||||||| | | ||||  |||| ||||||||||| |    
T  38104295 ttttattggataaaatcaatgtatgttccaccactttatttgggttccattcccaaagtgtatgacccacattgaattaattcaatgagagagtgagtgt 38104394  T
Q  247 tagagag 253  Q
    |||||||    
T  38104395 tagagag 38104401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 10339796 - 10339849
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccacttt 184  Q
    |||||||||||||||| |||||||||   ||||||||| |||||||||||||||    
T  10339796 ctctctagcactcactattttattggggaaaatcaatgaatgtcccaccacttt 10339849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 131 - 168
Target Start/End: Original strand, 28898064 - 28898101
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatg 168  Q
    |||| |||||||||||||||||||||||||||||||||    
T  28898064 ctctttagcactcactcttttattggatgaaatcaatg 28898101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 209
Target Start/End: Original strand, 4877298 - 4877390
Alignment:
Q  117 ctcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgta 209  Q
    ||||||||| ||  || ||||||||||||||||||||| |||| |||  ||||||||| || ||||||||||  |||| ||||  ||||||||    
T  4877298 ctcacttttaaattctttctagcactcactcttttatttgatggaattcatgcatgtctcatcactttgtgtgagttctatttctaaagtgta 4877390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 168
Target Start/End: Complemental strand, 21447267 - 21447220
Alignment:
Q  121 cttttcaacactctctagcactcactcttttattggatgaaatcaatg 168  Q
    ||||||||||||||||| ||| |||||||||||||  |||||||||||    
T  21447267 cttttcaacactctctaacacccactcttttattgtgtgaaatcaatg 21447220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 184
Target Start/End: Complemental strand, 41546210 - 41546125
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccacttt 184  Q
    |||||||||||||| | ||| ||||||||||||||||  | || ||||||| |||||||||| |||||||  ||||||| |||||||    
T  41546210 gaggaatgctagcatcactctcttttcaacactctctcaaacattcactctcttattggatg-aatcaatatatgtcccgccacttt 41546125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 259
Target Start/End: Original strand, 37077978 - 37078119
Alignment:
Q  121 cttttcaacact--ctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgt-agacccaca 217  Q
    ||||||||||||  ||||| ||| |||||| |||||||||| ||| | || |||||||||||||||  || |  || |||| ||| |||| ||||||||     
T  37077978 cttttcaacactttctctaacacacactctcttattggatgtaattagtgtatgtcccaccactttaagtggaatccatttccaatgtgtgagacccacc 37078077  T
Q  218 ataatttaaaccaataagagagtgagtattagagagggtgtt 259  Q
     ||||||||||||||||   ||||||| || ||||| |||||    
T  37078078 ttaatttaaaccaataatgaagtgagtgtttgagagagtgtt 37078119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 168
Target Start/End: Original strand, 4964700 - 4964737
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatg 168  Q
    |||||||||||||||||||||||||||| | |||||||    
T  4964700 ctctctagcactcactcttttattggataagatcaatg 4964737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 163
Target Start/End: Original strand, 27968912 - 27968980
Alignment:
Q  97 aaagaggaatgctagcacctctcacttttca--acactctctagcactcactcttttattggatgaaat 163  Q
    |||||| |||||||||| | ||| ||||| |  || |||||||||||||||||||||||||| ||||||    
T  27968912 aaagagaaatgctagcaacactctcttttgagtactctctctagcactcactcttttattgggtgaaat 27968980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 163
Target Start/End: Complemental strand, 28091675 - 28091607
Alignment:
Q  97 aaagaggaatgctagcacctctcacttttca--acactctctagcactcactcttttattggatgaaat 163  Q
    |||||| |||||||||| | ||| ||||| |  || |||||||||||||||||||||||||| ||||||    
T  28091675 aaagagaaatgctagcaacactctcttttgagtactctctctagcactcactcttttattgggtgaaat 28091607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 163
Target Start/End: Complemental strand, 28101907 - 28101839
Alignment:
Q  97 aaagaggaatgctagcacctctcacttttca--acactctctagcactcactcttttattggatgaaat 163  Q
    |||||| |||||||||| | ||| ||||| |  || |||||||||||||||||||||||||| ||||||    
T  28101907 aaagagaaatgctagcaacactctcttttgagtactctctctagcactcactcttttattgggtgaaat 28101839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 44674593 - 44674686
Alignment:
Q  150 ttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagt-gtagacccacaataatttaaaccaataagagagtga 242  Q
    ||||||||||||||||||| | |||  |||||||| ||| |  || ||||||||||| | |||||| || | |||||| |||||||||||||||    
T  44674593 ttattggatgaaatcaatgtaggtcttaccactttatgtggaatccattttcaaagtaggagacccgcattgatttaatccaataagagagtga 44674686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 10339821 - 10339769
Alignment:
Q  228 ccaataagagagtgagtattagagagggtgttcaaaagagtgttgctagcatt 280  Q
    ||||||| | |||||||  ||||||| |||||||||||| |||||||||||||    
T  10339821 ccaataaaatagtgagtgctagagagagtgttcaaaagattgttgctagcatt 10339769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 17460974 - 17461018
Alignment:
Q  209 agacccacaataatttaaaccaataagagagtgagtattagagag 253  Q
    |||| ||||||||||||||  ||||||||||||| ||||||||||    
T  17460974 agacacacaataatttaaattaataagagagtgaatattagagag 17461018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 174
Target Start/End: Complemental strand, 25666759 - 25666700
Alignment:
Q  117 ctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtc 174  Q
    |||| |||||||||||||||  | || |||||||||||| |||||||||||||| |||||    
T  25666759 ctcatttttcaacactctctcaaacattcactcttttatcggatgaaatcaatgtatgtc 25666700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 139 - 167
Target Start/End: Complemental strand, 42579799 - 42579771
Alignment:
Q  139 cactcactcttttattggatgaaatcaat 167  Q
    |||||||||||||||||||||||||||||    
T  42579799 cactcactcttttattggatgaaatcaat 42579771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 108; Significance: 4e-54; HSPs: 80)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 100 - 259
Target Start/End: Original strand, 41958082 - 41958241
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattt 199  Q
    |||||||||||| | | ||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||| ||||||  ||||||||||    
T  41958082 gaggaatgctagtaacactcacttttcaacactctcaagcactcactcatttattggatgaaatcaatgtatgtcccaccattttgtgggggttcaattt 41958181  T
Q  200 tcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgtt 259  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||| || |||||    
T  41958182 tcaaagtgtagacccacagtgatttaaaccaataagagagtgagtattagaaagagtgtt 41958241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 99 - 281
Target Start/End: Complemental strand, 6133808 - 6133623
Alignment:
Q  99 agaggaatgctagcacctctcacttttcaaca--ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaa 196  Q
    ||||||||||||||| | ||||||||||||||  ||||||||||||||| |||||||||||||||||||||  |||||||||||  |||||| |||||||    
T  6133808 agaggaatgctagcaacactcacttttcaacaatctctctagcactcacccttttattggatgaaatcaatatatgtcccaccatattgtgtgggttcaa 6133709  T
Q  197 ttttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagcatta 281  Q
    |||||||||| || ||||||||| | |||||||||||||||||||||||||||||||| ||||||||  |||||||||||| |||||    
T  6133708 ttttcaaagtctacacccacaatga-ttaaaccaataagagagtgagtattagagaggatgttcaaaagagagtgttgctaacatta 6133623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 98 - 267
Target Start/End: Original strand, 2225221 - 2225390
Alignment:
Q  98 aagaggaatgctagcacctctcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    |||||||||||||| | | |||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||  |    
T  2225221 aagaggaatgctagtaacactcaattttcaacactctctagcacccactcttttattggatgaaatcaatgtatgtcccaccactttgtgtgggttcggt 2225320  T
Q  198 tttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagag 267  Q
    || ||||||||||||| ||| | |||||||||||||||| ||||||||| | | || |||||||||||||    
T  2225321 ttacaaagtgtagaccgacagtgatttaaaccaataagaaagtgagtatcacaaagcgtgttcaaaagag 2225390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 99 - 281
Target Start/End: Complemental strand, 10659953 - 10659767
Alignment:
Q  99 agaggaatgctagcacctctcacttttcaacactctct--agcactcactctttt-attggatgaaatcaatgcatgtcccaccactttgtgtaggttca 195  Q
    |||| |||| ||||| | |||||||||||| |||||||  | |||||||| |||| || |||||||||||||| |||||| |||||||||||||||||||    
T  10659953 agagtaatgttagcaacactcacttttcaatactctctctaacactcactttttttatgggatgaaatcaatggatgtccgaccactttgtgtaggttca 10659854  T
Q  196 attttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaag--agtgttgctagcatta 281  Q
    ||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||  |||||||||||  | ||||||||||||||    
T  10659853 attttcaaagtgtagacccacgatgatttaaaccaataagagagtg-gtattagagaaagtgttcaaaagaaaatgttgctagcatta 10659767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 99 - 281
Target Start/End: Original strand, 8899010 - 8899196
Alignment:
Q  99 agaggaatgctagcacctctcacttttcaacactc--tctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaa 196  Q
    |||| |||| ||||| | |||||||||||||| ||  |||| ||||  || ||| ||| |||||||| || | |||||||||| |||||||| |||||||    
T  8899010 agagaaatgttagcaacactcacttttcaacattccctctaacacttgctatttaattagatgaaataaaggtatgtcccacccctttgtgtgggttcaa 8899109  T
Q  197 ttttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagag--tgttgctagcatta 281  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||    
T  8899110 ttttcaaagtgtaggtccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagagattgttgctagcatta 8899196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 99 - 281
Target Start/End: Complemental strand, 28218232 - 28218044
Alignment:
Q  99 agaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaa 196  Q
    ||||||| | ||||| | |||| |||||||| ||||||  |||| ||||||||||||||||||||||||||| ||||| ||||||||||||| | |||||    
T  28218232 agaggaaggttagcaacactcatttttcaaccctctctttagcattcactcttttattggatgaaatcaatgtatgtctcaccactttgtgtggattcaa 28218133  T
Q  197 ttttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagg--gtgttcaaa--agagtgttgctagcatta 281  Q
    ||||||||||||||| ||||| |||||||||  ||||||| |||||||||||||| ||  |||||||||  ||||||||||||||||||    
T  28218132 ttttcaaagtgtagaaccacagtaatttaaattaataagatagtgagtattagagcgggagtgttcaaaagagagtgttgctagcatta 28218044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 141 - 280
Target Start/End: Complemental strand, 30679051 - 30678910
Alignment:
Q  141 ctcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagt 240  Q
    |||||||||| | ||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||| |||||||||||||    
T  30679051 ctcactctttcaatggataaaatcaatgtatgtcccaccactttgtgtgggttcaattttcaaagtgtagactcacaatgatttaagccaataagagagt 30678952  T
Q  241 gagtattagagagggtgttc--aaaagagtgttgctagcatt 280  Q
    |||| |||||||| ||| ||  ||||||||||||||||||||    
T  30678951 gagtgttagagagagtgctcaaaaaagagtgttgctagcatt 30678910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 100 - 279
Target Start/End: Complemental strand, 26980445 - 26980262
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    ||||||||||| || | ||||||||||||||||||||  |  ||||||||| ||||||||||||||||||| ||||||||||| |||||||  |||||||    
T  26980445 gaggaatgctaacaacactcacttttcaacactctctctaatactcactctattattggatgaaatcaatgtatgtcccaccattttgtgtgagttcaat 26980346  T
Q  198 tttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagcat 279  Q
    ||||||| | || | ||||||| ||||||| |||||||||||||||||||| |||| ||||| |||  ||||||||||||||||    
T  26980345 tttcaaaatatacatccacaatgatttaaatcaataagagagtgagtattatagagagtgttgaaaagagagtgttgctagcat 26980262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 103 - 267
Target Start/End: Complemental strand, 19101781 - 19101615
Alignment:
Q  103 gaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaatttt 200  Q
    ||||||||||| |  ||||||||  |||||||||  |||||||||| ||||||||||||||||||||| ||||||||||||||| ||   |||| |||||    
T  19101781 gaatgctagcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttt 19101682  T
Q  201 caaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagag 267  Q
    ||||||||||| |  |||| |||||||||||||||| |||||||||||||||| |||||||||||||    
T  19101681 caaagtgtagatctgcaatgatttaaaccaataagaaagtgagtattagagagagtgttcaaaagag 19101615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 140 - 263
Target Start/End: Original strand, 33193089 - 33193212
Alignment:
Q  140 actcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagag 239  Q
    |||||||  |||||||||||||||||||| |||| |||||| ||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||     
T  33193089 actcacttatttattggatgaaatcaatgtatgtgccaccattttgtgagggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagaa 33193188  T
Q  240 tgagtattagagagggtgttcaaa 263  Q
    |||||||||||||  |||||||||    
T  33193189 tgagtattagagaaagtgttcaaa 33193212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 140 - 267
Target Start/End: Complemental strand, 41948287 - 41948160
Alignment:
Q  140 actcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagag 239  Q
    ||||||||||||||||||| ||||||||| || | | |||||||||||| |||||||||||||||||||| | ||||||| ||||||| |||||||||||    
T  41948287 actcactcttttattggataaaatcaatgtatattctaccactttgtgttggttcaattttcaaagtgtaaatccacaatgatttaaatcaataagagag 41948188  T
Q  240 tgagtattagagagggtgttcaaaagag 267  Q
    ||||| |||||||| |||||||||||||    
T  41948187 tgagtgttagagagagtgttcaaaagag 41948160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 97 - 267
Target Start/End: Original strand, 25543334 - 25543505
Alignment:
Q  97 aaagaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttc 194  Q
    ||||||||||||||||| | ||||||||| ||||||||||  | |||| ||||||||||| ||||||||||||  |||||||||||||||||||||| |     
T  25543334 aaagaggaatgctagcaacactcacttttaaacactctctctaacacttactcttttatttgatgaaatcaatatatgtcccaccactttgtgtagg-ta 25543432  T
Q  195 aattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagag 267  Q
     |||  ||| ||| || | |||||| |||||||||||||||| |||||||||||||||| |||||||||||||    
T  25543433 tattcccaatgtgcagcctcacaatgatttaaaccaataagatagtgagtattagagagagtgttcaaaagag 25543505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 100 - 281
Target Start/End: Original strand, 11987623 - 11987808
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    ||||||| ||| || | ||||||||||||||||||||  | || | | || ||||||||||||||| |||| |||| ||||||||| |||  ||||||||    
T  11987623 gaggaatactaacaacactcacttttcaacactctctccaacatttattcatttattggatgaaattaatgtatgttccaccacttagtgcgggttcaat 11987722  T
Q  198 tttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagcatta 281  Q
    |||||||||||||||||||||| |||||||||| ||||||||||  ||||||| || ||||| |||  ||||||||||||||||||    
T  11987723 tttcaaagtgtagacccacaatgatttaaaccattaagagagtggatattagaaagagtgtttaaaagagagtgttgctagcatta 11987808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 105 - 259
Target Start/End: Original strand, 35336868 - 35337018
Alignment:
Q  105 atgctagcacctctcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaa 204  Q
    ||||||||| | ||||||||||||||  |||||||||||| | |||||||||||||||||||||    || ||||||||||||| ||||||||||||  |    
T  35336868 atgctagcaacactcacttttcaacatcctctagcactcattattttattggatgaaatcaatg----tctcaccactttgtgtgggttcaattttctta 35336963  T
Q  205 gtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgtt 259  Q
     ||||||| |||||| ||||||||||||||||||  ||||||||||||| |||||    
T  35336964 atgtagacacacaatgatttaaaccaataagagaacgagtattagagagagtgtt 35337018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 103 - 244
Target Start/End: Complemental strand, 3872813 - 3872671
Alignment:
Q  103 gaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaatttt 200  Q
    ||||||||||| | ||||||||||||||||||||  ||||||||||||| ||||  || ||||||||  ||||| ||||||||||||||||||||||||     
T  3872813 gaatgctagcaacactcacttttcaacactctctctagcactcactcttctattaaat-aaatcaatatatgtcacaccactttgtgtaggttcaatttc 3872715  T
Q  201 caaagtgtagacccacaataatttaaaccaataagagagtgagt 244  Q
    ||||||||||||||||||| ||| |||||||||| |||| ||||    
T  3872714 caaagtgtagacccacaatgattcaaaccaataaaagagagagt 3872671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 131 - 259
Target Start/End: Original strand, 29673505 - 29673633
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaacca 230  Q
    ||||||| |||||| | ||||||||||| ||||||||  ||||||||||| ||||||||| |||||||||||||||||||| | ||||| ||||||||||    
T  29673505 ctctctaacactcattattttattggataaaatcaatatatgtcccaccattttgtgtagtttcaattttcaaagtgtagaactacaattatttaaacca 29673604  T
Q  231 ataagagagtgagtattagagagggtgtt 259  Q
    |||| | |||||||||||||||| |||||    
T  29673605 ataaaaaagtgagtattagagagagtgtt 29673633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 131 - 267
Target Start/End: Complemental strand, 32211934 - 32211798
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaacca 230  Q
    ||||| |||||||||||||||||| ||||||||||||| |||||| || |||||||||  |||||||||| || ||||||||||||||| ||||||||||    
T  32211934 ctctccagcactcactcttttattagatgaaatcaatgtatgtccaactactttgtgtgagttcaatttttaaggtgtagacccacaatgatttaaacca 32211835  T
Q  231 ataagagagtgagtattagagagggtgttcaaaagag 267  Q
    ||||||||||||  |||| |||  ||||| |||||||    
T  32211834 ataagagagtgatcattaaagaaagtgttgaaaagag 32211798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 99 - 280
Target Start/End: Original strand, 931370 - 931555
Alignment:
Q  99 agaggaatgctagcacctctcacttttcaacact--ctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaa 196  Q
    ||||||||||||||| | ||||||||||||| ||  |||||  |||||||||||||||| ||| || ||||| |||||||| || ||| ||| |||||||    
T  931370 agaggaatgctagcaacactcacttttcaactctatctctaatactcactcttttattgaatggaagcaatgtatgtcccatcattttttgtgggttcaa 931469  T
Q  197 ttttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaa--aagagtgttgctagcatt 280  Q
    |||||||| | || ||||||||| |||||||||||||| ||||||| ||||||| |  ||||| ||  ||||||||||||||||||    
T  931470 ttttcaaaatatacacccacaatgatttaaaccaataaaagagtgaatattagaaaaagtgttaaaagaagagtgttgctagcatt 931555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 103 - 267
Target Start/End: Complemental strand, 8741405 - 8741237
Alignment:
Q  103 gaatgctagcacctctcacttttcaacactctct----agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaatt 198  Q
    ||||||||||| | |||||||||||| |||||||    ||   ||||| ||||||||||||||||||||| ||||| ||| | ||||||| |||||||||    
T  8741405 gaatgctagcaacactcacttttcaaaactctctctttagtggtcacttttttattggatgaaatcaatgtatgtctcactaatttgtgtgggttcaatt 8741306  T
Q  199 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagag 267  Q
    |||||||| || || |||||| |||||||| |||||||||||||||||||||||   ||||||||||||    
T  8741305 ttcaaagtataaacacacaatgatttaaactaataagagagtgagtattagagaaattgttcaaaagag 8741237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 99 - 259
Target Start/End: Original strand, 44271914 - 44272076
Alignment:
Q  99 agaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaa 196  Q
    ||||||||||||||| |   ||||||| ||||||||||  |||||| ||| |||||||| |||||||||||| |||| |||||| ||| |||||||||||    
T  44271914 agaggaatgctagcaacatccacttttaaacactctctttagcacttactattttattgaatgaaatcaatgtatgttccaccattttttgtaggttcaa 44272013  T
Q  197 ttttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgtt 259  Q
    ||||||||||||||| | ||||| ||||||| |||||| | | ||||||||||| || |||||    
T  44272014 ttttcaaagtgtagaacaacaatgatttaaatcaataaaaaaatgagtattagaaagagtgtt 44272076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 117 - 252
Target Start/End: Original strand, 51732293 - 51732428
Alignment:
Q  117 ctcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccac 216  Q
    ||||||||||||| ||||||| || ||||| ||||||| |||||||| |||| || | |||| ||||| |||  ||| |||||||||||| || ||||||    
T  51732293 ctcacttttcaacgctctctaacattcacttttttatttgatgaaattaatgtattttccactactttatgtgagtttaattttcaaagtataaacccac 51732392  T
Q  217 aataatttaaaccaataagagagtgagtattagaga 252  Q
    |||||||||||||||||| |||||||||||||||||    
T  51732393 aataatttaaaccaataaaagagtgagtattagaga 51732428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 103 - 267
Target Start/End: Original strand, 22540368 - 22540530
Alignment:
Q  103 gaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaatttt 200  Q
    ||||||||||| |  ||||||||  |||||||||  |||||||||| ||||||||||||||||||||| ||||||||||||||| ||   |||| ||||     
T  22540368 gaatgctagcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttc 22540467  T
Q  201 caaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagag 267  Q
    ||||||||||| || |||| |||||||||||||    ||| ||||||| |||| |||||||||||||    
T  22540468 caaagtgtagatccgcaatgatttaaaccaata----agttagtattaaagagagtgttcaaaagag 22540530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 131 - 267
Target Start/End: Complemental strand, 37553099 - 37552965
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaacca 230  Q
    |||||||||||| ||| | |||||||||||||| ||||  ||||||| ||||||  || ||||  |||||||||||||||| ||||||| ||||||| ||    
T  37553099 ctctctagcacttactttcttattggatgaaattaatgtttgtcccatcacttttagtgggttttattttcaaagtgtagatccacaatgatttaaatca 37553000  T
Q  231 ataagagagtgagtattagagagggtgttcaaaagag 267  Q
    |||||||||||||||||| |||  |||||||||||||    
T  37552999 ataagagagtgagtattaaaga--gtgttcaaaagag 37552965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 139 - 267
Target Start/End: Original strand, 15468258 - 15468386
Alignment:
Q  139 cactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagaga 238  Q
    ||||||||||||||||  ||  |||||||| ||||| ||  ||||||||| ||||||||||||| ||||||||||||||||||||||||  ||||| |||    
T  15468258 cactcactcttttattaaatagaatcaatgtatgtctcattactttgtgtgggttcaattttcatagtgtagacccacaataatttaaattaataaaaga 15468357  T
Q  239 gtgagtattagagagggtgttcaaaagag 267  Q
    || |||||| ||||  |||||||||||||    
T  15468358 gtaagtatttgagatagtgttcaaaagag 15468386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 131 - 267
Target Start/End: Original strand, 15523240 - 15523372
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaacca 230  Q
    |||| ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||   |||| ||||  |||||||||| || |||| ||||||||||    
T  15523240 ctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttctaaagtgtagatccgcaatgatttaaacca 15523339  T
Q  231 ataagagagtgagtattagagagggtgttcaaaagag 267  Q
    |||    ||| |||||||||||| |||||||||||||    
T  15523340 ata----agttagtattagagagagtgttcaaaagag 15523372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 131 - 267
Target Start/End: Original strand, 15531234 - 15531366
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaacca 230  Q
    |||| ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||   |||| ||||  |||||||||| || |||| ||||||||||    
T  15531234 ctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttctaaagtgtagatccgcaatgatttaaacca 15531333  T
Q  231 ataagagagtgagtattagagagggtgttcaaaagag 267  Q
    |||    ||| |||||||||||| |||||||||||||    
T  15531334 ata----agttagtattagagagagtgttcaaaagag 15531366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 100 - 279
Target Start/End: Original strand, 11135736 - 11135920
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactct--ctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    |||||||||||||| | ||| ||||| | ||||||  |||||||||||| ||||||||| ||||||||||| ||||||||||||||| ||| ||||| ||    
T  11135736 gaggaatgctagcaacactctcttttgagcactctctctagcactcactattttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 11135835  T
Q  198 tttcaaagtgta-gacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagcat 279  Q
    || ||||||||| | || ||| | |||| | ||||||| |||||||||  ||||||| ||  |||||  ||||||||||||||||    
T  11135836 ttccaaagtgtaggtcctacattgatttcacccaataaaagagtgagtgctagagagagtcctcaaaagagagtgttgctagcat 11135920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 131 - 267
Target Start/End: Original strand, 15928585 - 15928719
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaacca 230  Q
    ||||||||||| |||||||||||| |||| |||  ||| ||||| ||||| |||||||  |||| |||||||| ||||||||  ||| | ||||||||||    
T  15928585 ctctctagcacccactcttttatttgatggaattcatgtatgtctcaccattttgtgtgagttctattttcaaggtgtagacttacagtgatttaaacca 15928684  T
Q  231 ataagagagtgagtattagagagggtgttcaaaagag 267  Q
    |||| |||||||||||||||||  |||||||||||||    
T  15928685 ataaaagagtgagtattagaga--gtgttcaaaagag 15928719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 93 - 267
Target Start/End: Complemental strand, 33060082 - 33059907
Alignment:
Q  93 taaaaaagaggaatgctagcacctctcacttttcaacac--tctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtag 190  Q
    ||||||||| |||||||||||   |||||||||| | ||  ||| || || |||||||||||||||||||||| || |||||||| |||||| | ||| |    
T  33060082 taaaaaagaagaatgctagcaatactcacttttctatacattctttaacagtcactcttttattggatgaaattaaagcatgtcc-accactctctgtgg 33059984  T
Q  191 gttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagag 267  Q
    ||| |||||| |||||||| || ||||||  |||||||||||||||||||| ||| |||| |  |||||||||||||    
T  33059983 gtttaatttttaaagtgtacactcacaatgttttaaaccaataagagagtgggtactagaaaaagtgttcaaaagag 33059907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 100 - 280
Target Start/End: Original strand, 11430438 - 11430622
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactct--ctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    ||||||||||| || | ||| ||||| | ||||||  |||||||||||||||||||||| ||||||||||| ||||||||||||||| ||| ||||| ||    
T  11430438 gaggaatgctaacaacactctcttttgagcactctttctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 11430537  T
Q  198 tttcaaagtgta-gacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaa--agagtgttgctagcatt 280  Q
    || ||||||||| | || ||| | | ||  |||||||| |||||||||  ||||||| ||| |||||  |||||||||||||||||    
T  11430538 ttccaaagtgtaggtcctacattgaatt-caccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcatt 11430622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 131 - 210
Target Start/End: Original strand, 41918025 - 41918104
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtag 210  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||| | ||| |||||||||||||||    
T  41918025 ctctctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtggattccattttcaaagtgtag 41918104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 124 - 232
Target Start/End: Original strand, 49730885 - 49730995
Alignment:
Q  124 ttcaacactctctag--cactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataa 221  Q
    ||||||||||||||   |||||||||||||||| ||| |||  |||  ||||| ||| ||||||||| |||||||||||||||||||||||||||||| |    
T  49730885 ttcaacactctctataacactcactcttttattagattaaactaatatatgtcacactactttgtgtgggttcaattttcaaagtgtagacccacaatga 49730984  T
Q  222 tttaaaccaat 232  Q
    |||||||||||    
T  49730985 tttaaaccaat 49730995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 139 - 253
Target Start/End: Complemental strand, 45179388 - 45179274
Alignment:
Q  139 cactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagaga 238  Q
    |||||| || ||||||| || ||||||||| |||| ||| |||||||||  |||||||||||||||||||| ||||||||||| |||||  ||||||| |    
T  45179388 cactcattcatttattgaataaaatcaatgtatgttccatcactttgtgagggttcaattttcaaagtgtaaacccacaataacttaaattaataagaaa 45179289  T
Q  239 gtgagtattagagag 253  Q
     ||||||||||||||    
T  45179288 atgagtattagagag 45179274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 100 - 210
Target Start/End: Complemental strand, 32848766 - 32848654
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaat 197  Q
    ||||||||||| || | ||| ||||| ||||||||||  |||||||||||||||||||| |||||||| || ||||||||||||||| ||| | ||| ||    
T  32848766 gaggaatgctaacaacactctcttttgaacactctctctagcactcactcttttattgggtgaaatcattgtatgtcccaccactttatgtggattccat 32848667  T
Q  198 tttcaaagtgtag 210  Q
    |||||||||||||    
T  32848666 tttcaaagtgtag 32848654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 131 - 280
Target Start/End: Complemental strand, 41095759 - 41095607
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagaccc-acaataatttaaacc 229  Q
    ||||||||||||||||| |||||||| ||||||||||| |||||||| |||| ||||| ||||| |||||||||||||||  || ||| | |||| | ||    
T  41095759 ctctctagcactcactcatttattgggtgaaatcaatgtatgtcccatcactctgtgtgggttccattttcaaagtgtaggtcctacattgatttcaccc 41095660  T
Q  230 aataagagagtgagtattagagagggtgttcaaaagag--tgttgctagcatt 280  Q
    |||||   |||||||  ||||||| ||| |||||||||  |||||||||||||    
T  41095659 aataaataagtgagtgctagagagagtgctcaaaagagagtgttgctagcatt 41095607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 139 - 280
Target Start/End: Original strand, 27570263 - 27570406
Alignment:
Q  139 cactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagaga 238  Q
    |||||| ||||||||||| |||||| ||   ||||||||||| |||||||  ||| |||||| |||||||| ||||||||| |||| ||| ||||||| |    
T  27570263 cactcattcttttattggttgaaattaagatatgtcccaccaatttgtgtgagtttaatttttaaagtgtaaacccacaatgatttgaactaataagaaa 27570362  T
Q  239 gtgagtattagagagggtgttcaaaagag--tgttgctagcatt 280  Q
    |||| | | |||||| |||||||||||||  |||||||||||||    
T  27570363 gtgaatttgagagagagtgttcaaaagagaatgttgctagcatt 27570406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 146 - 253
Target Start/End: Original strand, 31866361 - 31866467
Alignment:
Q  146 tcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagta 245  Q
    |||||| |||||||||||||||| ||||||||| | ||| || |||||||||||| |||||||| | ||||||| |||||||| ||||||| ||||||||    
T  31866361 tcttttgttggatgaaatcaatgtatgtcccactattttttgaaggttcaatttttaaagtgta-atccacaatgatttaaactaataagaaagtgagta 31866459  T
Q  246 ttagagag 253  Q
    ||| ||||    
T  31866460 ttaaagag 31866467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 131 - 253
Target Start/End: Complemental strand, 50425016 - 50424893
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgta-gacccacaataatttaaacc 229  Q
    ||||||| |||||||||||||||||||| |||||||| |||  ||||||||||| |||| |||| |||| ||||||||| |||||||| | |||||| ||    
T  50425016 ctctctaacactcactcttttattggataaaatcaatccataccccaccactttatgtaagttccatttccaaagtgtatgacccacattgatttaaccc 50424917  T
Q  230 aataagagagtgagtattagagag 253  Q
    ||||| | ||||| | ||||||||    
T  50424916 aataaaaaagtgaatgttagagag 50424893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 139 - 234
Target Start/End: Original strand, 50539162 - 50539257
Alignment:
Q  139 cactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataa 234  Q
    |||||||||||||||||||||||||||| | |||| |||||||||| ||| ||||||||||||  ||||||||| | |||| |||||||| |||||    
T  50539162 cactcactcttttattggatgaaatcaaagtatgttccaccactttatgtgggttcaattttctcagtgtagacacgcaatgatttaaactaataa 50539257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 106 - 184
Target Start/End: Complemental strand, 4578752 - 4578674
Alignment:
Q  106 tgctagcacctctcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccacttt 184  Q
    |||||||| | ||| ||||||||||||||||| |||||||||||||||||| ||||||||||| | |||||||||||||    
T  4578752 tgctagcaacactctcttttcaacactctctaacactcactcttttattgggtgaaatcaatgtaggtcccaccacttt 4578674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 139 - 267
Target Start/End: Original strand, 15660931 - 15661058
Alignment:
Q  139 cactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgta-gacccacaataatttaaaccaataagag 237  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||  ||||  |||| |||| |||| ||  |||| | |||||| ||||||| ||    
T  15660931 cactcactcttttattggataaaatcaatgcatgtcccaccactttatgcgggttttatttccaaaatgtatga--cacattgatttaacccaataatag 15661028  T
Q  238 agtgagtattagagagggtgttcaaaagag 267  Q
    ||||||| |||||||| |||| ||||||||    
T  15661029 agtgagtgttagagagagtgtccaaaagag 15661058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 118 - 211
Target Start/End: Original strand, 24911480 - 24911573
Alignment:
Q  118 tcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtaga 211  Q
    |||||||| |||||||||||||||||| ||||||||| ||||||||| ||| ||||||||||||||| ||| ||||  |||| |||||| ||||    
T  24911480 tcacttttgaacactctctagcactcattcttttattcgatgaaatccatgtatgtcccaccactttttgtgggttttatttccaaagtataga 24911573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 132 - 252
Target Start/End: Original strand, 28109899 - 28110019
Alignment:
Q  132 tctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtaga-cccacaataatttaaacca 230  Q
    ||||||||||||||| ||||||||| |||||||||||||||| |||||| ||| ||| ||||| | |||||||||||||| || | ||| |||| | |||    
T  28109899 tctctagcactcacttttttattgggtgaaatcaatgcatgttccaccattttatgtgggttcca-tttcaaagtgtagatcctagaatgatttcatcca 28109997  T
Q  231 ataagagagtgagtattagaga 252  Q
    |||| | |||||||||||||||    
T  28109998 ataaaaaagtgagtattagaga 28110019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 144 - 249
Target Start/End: Original strand, 31074759 - 31074863
Alignment:
Q  144 actcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgag 243  Q
    ||||||||||| |||||||||||| ||||||| | |||||| ||| | ||| ||||||||| |||||||||||||| | ||| ||||||||||||||| |    
T  31074759 actcttttatttgatgaaatcaatacatgtcctaacactttatgttgattctattttcaaaatgtagacccacaatga-ttagaccaataagagagtggg 31074857  T
Q  244 tattag 249  Q
    ||||||    
T  31074858 tattag 31074863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 160 - 265
Target Start/End: Original strand, 33114030 - 33114135
Alignment:
Q  160 aaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgtt 259  Q
    |||||| || ||||||||||| ||| |||||||||||||||||||||||||| ||| ||| |||||||||||||| | |||||||  || |||| |||||    
T  33114030 aaatcattgtatgtcccaccattttatgtaggttcaattttcaaagtgtagatccagaatgatttaaaccaataaaaaagtgagtcctatagagagtgtt 33114129  T
Q  260 caaaag 265  Q
     |||||    
T  33114130 taaaag 33114135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 139 - 267
Target Start/End: Original strand, 36566934 - 36567056
Alignment:
Q  139 cactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagaga 238  Q
    |||| ||| ||||||||||||||||||||| ||||| || |||||| | | ||||| |||||||||||||||| ||| ||| |||      ||||| |||    
T  36566934 cacttactattttattggatgaaatcaatgtatgtctcatcactttatttgggttctattttcaaagtgtagatccagaattatt------aataataga 36567027  T
Q  239 gtgagtattagagagggtgttcaaaagag 267  Q
    ||||||||||||||| |||||||||||||    
T  36567028 gtgagtattagagagtgtgttcaaaagag 36567056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 100 - 236
Target Start/End: Complemental strand, 6325993 - 6325858
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattt 199  Q
    ||||||| |||||| | ||||||||| |||||||||||  | |||||| ||||||  || ||||||||| ||||||||||| |||||||  ||||  |||    
T  6325993 gaggaatactagcaacgctcacttttgaacactctctaataatcactcatttattaaataaaatcaatgtatgtcccaccattttgtgtgagttc-tttt 6325895  T
Q  200 tcaaagtgtagacccacaataatttaaaccaataaga 236  Q
    |||||||||| ||||||||| || |||||||| ||||    
T  6325894 tcaaagtgtaaacccacaatgatgtaaaccaacaaga 6325858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 12767418 - 12767342
Alignment:
Q  191 gttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttcaaaagag 267  Q
    |||| ||||| ||||||||||| || ||| |||||||||||||| ||||||||||||||||||||| ||||||||||    
T  12767418 gttctatttttaaagtgtagactcataatgatttaaaccaataaaagagtgagtattagagagggttttcaaaagag 12767342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 121 - 210
Target Start/End: Complemental strand, 14094163 - 14094072
Alignment:
Q  121 cttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtag 210  Q
    ||||| ||||||||||  |||||||||| ||||||||| ||||||||||| ||||||||||||||| ||| ||||| |||| ||||||||||    
T  14094163 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtag 14094072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 131 - 278
Target Start/End: Complemental strand, 13114820 - 13114670
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgta-gacccacaataatttaaacc 229  Q
    ||||||| |||||||||||||||| ||| ||||||||  ||||||||||||||| | | | ||| |||| |||| ||||  ||||||| | |||||| ||    
T  13114820 ctctctaacactcactcttttattagataaaatcaatatatgtcccaccactttatatggattccatttccaaaatgtataacccacattgatttaaccc 13114721  T
Q  230 aataagagagtgagtattagagagggtgttcaaa--agagtgttgctagca 278  Q
    ||| ||| ||||||| |||||||| |||| ||||  |||||||||||||||    
T  13114720 aatgagatagtgagtgttagagagagtgtccaaaagagagtgttgctagca 13114670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 131 - 267
Target Start/End: Complemental strand, 50773261 - 50773124
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgta-gacccacaataatttaaacc 229  Q
    ||||||| |||||||||||||||||||| ||||||||  |||| |||||||||| ||| ||||| |||| |||| | || | || ||| |||||| | ||    
T  50773261 ctctctaacactcactcttttattggataaaatcaatatatgttccaccactttatgtgggttccatttccaaaatataggtcctacattaattttaccc 50773162  T
Q  230 aataagagagtgagtattagagagggtgttcaaaagag 267  Q
    ||||| ||| |||||  ||||||| |||||||||||||    
T  50773161 aataaaagaatgagtgctagagagagtgttcaaaagag 50773124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 128 - 236
Target Start/End: Complemental strand, 1093226 - 1093118
Alignment:
Q  128 acactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaa 227  Q
    ||||||| |||||| ||||| |||||| ||||||||||||| |||| |||||||||||| |  |||  |||| ||||||||||  ||||||| |||||||    
T  1093226 acactctttagcacgcactcgtttattagatgaaatcaatgtatgttccaccactttgtatgagttatatttccaaagtgtagttccacaatgatttaaa 1093127  T
Q  228 ccaataaga 236  Q
    | |||||||    
T  1093126 ctaataaga 1093118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 101 - 166
Target Start/End: Complemental strand, 39039537 - 39039470
Alignment:
Q  101 aggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaa 166  Q
    ||||||||||||| | |||||||||||||||||| |  ||||||||||||||||||||||||||||||    
T  39039537 aggaatgctagcaacactcacttttcaacactctttttagcactcactcttttattggatgaaatcaa 39039470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 132 - 239
Target Start/End: Original strand, 37525560 - 37525667
Alignment:
Q  132 tctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaa 231  Q
    |||||| || ||||||||| ||||||| ||| | ||| |||| |||||| ||| ||| ||||||||||||||||| |||| | ||||| |||||||| ||    
T  37525560 tctctaacattcactctttcattggataaaacccatgtatgttccaccattttatgtgggttcaattttcaaagtctagatctacaatgatttaaactaa 37525659  T
Q  232 taagagag 239  Q
    ||||||||    
T  37525660 taagagag 37525667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 137 - 280
Target Start/End: Complemental strand, 13388483 - 13388335
Alignment:
Q  137 agcactcactcttttattggatgaaatcaatgcatgtcccaccactt--tgtgtaggttcaattttcaaagtgta-gacccacaataatttaaaccaata 233  Q
    |||||||||||||||||||| ||||||||||| ||||| ||||||||  | ||| ||||  |||||||||||||| |  | ||| | |||| | ||||||    
T  13388483 agcactcactcttttattgggtgaaatcaatgtatgtctcaccactttatatgtgggtttcattttcaaagtgtaggtactacattgatttcatccaata 13388384  T
Q  234 agagagtgagtattagagagggtgttcaaa--agagtgttgctagcatt 280  Q
    | | ||||||| |||||||| || ||||||  |||||||||||||||||    
T  13388383 aaaaagtgagtgttagagagagtattcaaaagagagtgttgctagcatt 13388335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 99 - 278
Target Start/End: Original strand, 39019571 - 39019746
Alignment:
Q  99 agaggaatgctagcacctctcacttttcaacactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaatt 198  Q
    ||||||||||||||| | ||| ||||||||||||||||  ||  |||||  ||||||| ||||||||||| ||||||||||||    ||| ||||  |||    
T  39019571 agaggaatgctagcaacactctcttttcaacactctct--caaacactc--ttattgggtgaaatcaatgtatgtcccaccac----tgtgggtttcatt 39019662  T
Q  199 ttcaaagtgta-gacccacaataatttaaaccaa-taagagagtgagtattagagagggtgttcaaa--agagtgttgctagca 278  Q
    ||||||  ||| |||||||| | ||| || |||| | |||||||||||||||||||  |||||||||  |||||||||||||||    
T  39019663 ttcaaaacgtaggacccacattgattgaagccaatttagagagtgagtattagagaaagtgttcaaaagagagtgttgctagca 39019746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 43851187 - 43851114
Alignment:
Q  129 cactctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttca 202  Q
    |||||||||| |||||||| |||||||| ||||||||||| ||||||||||||||| | | ||||| |||||||    
T  43851187 cactctctagtactcactcatttattgggtgaaatcaatgtatgtcccaccactttatatgggttccattttca 43851114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 96 - 210
Target Start/End: Original strand, 44739111 - 44739227
Alignment:
Q  96 aaaagaggaatgctagcacctctcacttttcaacactct--ctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggtt 193  Q
    |||||||||||| ||||| | ||| ||||| ||||||||  ||||||||||||||||| |||  |||||| |||| ||||||||||||||| |||  |||    
T  44739111 aaaagaggaatgttagcaacactctcttttgaacactctctctagcactcactcttttcttgagtgaaattaatgtatgtcccaccactttatgtgagtt 44739210  T
Q  194 caattttcaaagtgtag 210  Q
      |||| ||||||||||    
T  44739211 gtatttccaaagtgtag 44739227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 136 - 267
Target Start/End: Original strand, 39499430 - 39499563
Alignment:
Q  136 tagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataag 235  Q
    ||||||||||||||| ||| ||| ||||||||| |||||  | |||||| |||  |||||||||||||| |||||| ||||||| ||||||  |||||||    
T  39499430 tagcactcactcttt-attagataaaatcaatgtatgtcatatcactttttgtgagttcaattttcaaaatgtagatccacaatgatttaattcaataag 39499528  T
Q  236 agagtg---agtattagagagggtgttcaaaagag 267  Q
    | ||||   | ||||||||| | ||||||||||||    
T  39499529 aaagtgaatactattagagaagatgttcaaaagag 39499563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 149 - 281
Target Start/End: Complemental strand, 39974326 - 39974198
Alignment:
Q  149 tttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtatta 248  Q
    |||||| ||||||||||||| |||| |||||| ||||| | |||||||      ||||| |||   ||||| ||||||||||||||||||||||||||||    
T  39974326 tttattagatgaaatcaatggatgttccaccattttgtatgggttcaa------aagtgcagatttacaatgatttaaaccaataagagagtgagtatta 39974233  T
Q  249 gagagggtgttcaaa--agagtgttgctagcatta 281  Q
    || ||  ||||||||  ||||||||| ||||||||    
T  39974232 gaaagaatgttcaaaagagagtgttgttagcatta 39974198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 148 - 278
Target Start/End: Original strand, 28941869 - 28942000
Alignment:
Q  148 ttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtatt 247  Q
    |||||||||||||||| | || |||||||||||  || ||| ||||| |||||| |||| | || ||||| | | ||||| |||||||||||||| | ||    
T  28941869 ttttattggatgaaattattgtatgtcccaccatattatgtgggttccattttctaagtatggatccacatttacttaaatcaataagagagtgaatgtt 28941968  T
Q  248 agagagggtg-ttcaaaagagtgttgctagca 278  Q
    ||| || ||| || ||||||||||||||||||    
T  28941969 agatagagtgtttaaaaagagtgttgctagca 28942000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 101 - 227
Target Start/End: Original strand, 46335092 - 46335223
Alignment:
Q  101 aggaatgctagcacctctcacttttcaacactct--ctagcactcactctt---ttattggatgaaatcaatgcatgtcccaccactttgtgtaggttca 195  Q
    |||||||||||||   ||||||||| ||||||||  |||||||||||||||   ||||||||||||||||||  || ||| ||||||||||    |||      
T  46335092 aggaatgctagcaaacctcacttttgaacactctttctagcactcactcttcttttattggatgaaatcaatctatatcctaccactttgtcagagttat 46335191  T
Q  196 attttcaaagtgtagacccacaataatttaaa 227  Q
    |||||||| || |||||||||||| |||||||    
T  46335192 attttcaatgtatagacccacaatgatttaaa 46335223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 182 - 247
Target Start/End: Complemental strand, 47644396 - 47644331
Alignment:
Q  182 tttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtatt 247  Q
    ||||||| ||||| |||||||| ||||| ||||||||| ||||||| ||||||||||| |||||||    
T  47644396 tttgtgtgggttctattttcaatgtgtaaacccacaatgatttaaatcaataagagagcgagtatt 47644331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 233
Target Start/End: Original strand, 743467 - 743551
Alignment:
Q  149 tttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaata 233  Q
    |||||||||||||||||||| |||| ||| ||||||||| | ||| |||||||||| |  ||||| ||||| |||||||| ||||    
T  743467 tttattggatgaaatcaatgtatgttccatcactttgtggaagtttaattttcaaaatagagacctacaatgatttaaacaaata 743551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 207 - 280
Target Start/End: Complemental strand, 16948603 - 16948528
Alignment:
Q  207 gtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttca--aaagagtgttgctagcatt 280  Q
    ||||| ||||||| ||||||| ||||||||||||||||||||||||   ||||||  | |||||||||||||||||    
T  16948603 gtagatccacaatgatttaaatcaataagagagtgagtattagagaaaatgttcaacagagagtgttgctagcatt 16948528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 24436608 - 24436540
Alignment:
Q  140 actcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgt 208  Q
    ||||||| ||||||  ||||||||||||| || |||||||||||| ||| ||||| |||||||||||||    
T  24436608 actcacttttttatctgatgaaatcaatgtatatcccaccactttatgtgggttctattttcaaagtgt 24436540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 9165339 - 9165385
Alignment:
Q  138 gcactcactcttttattggatgaaatcaatgcatgtcccaccacttt 184  Q
    ||||||||||||||||||| ||||||||||| |||||| ||||||||    
T  9165339 gcactcactcttttattgggtgaaatcaatgtatgtcctaccacttt 9165385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 146 - 240
Target Start/End: Original strand, 15906586 - 15906679
Alignment:
Q  146 tcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagt 240  Q
    |||||||||  ||||||||||||  | ||| |||| ||||||| |  ||||||||||||||||||| | |||||||||||||  |||||||||||    
T  15906586 tcttttatttcatgaaatcaatgattatcc-accattttgtgtcgagtcaattttcaaagtgtagatctacaataatttaaattaataagagagt 15906679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 18157056 - 18157121
Alignment:
Q  121 cttttcaacactctct--agcactcactcttttattggatgaaatcaatgcatgtcccaccacttt 184  Q
    ||||||||||||||||  | ||| |||| |||||||||||||||| |||| |||||||||||||||    
T  18157056 cttttcaacactctctctaacacccacttttttattggatgaaattaatgtatgtcccaccacttt 18157121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 131 - 168
Target Start/End: Complemental strand, 11135892 - 11135855
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatg 168  Q
    |||||||||||||||||||||||||| |||||||||||    
T  11135892 ctctctagcactcactcttttattgggtgaaatcaatg 11135855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 270
Target Start/End: Complemental strand, 31602204 - 31602072
Alignment:
Q  139 cactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgt-agacccacaataatttaaaccaataagag 237  Q
    |||||||||| |||||||||||||   |||   ||| |||||||||  || || || |||| |||||||| |||||||||  | ||| | ||||||||||    
T  31602204 cactcactctcttattggatgaaacacatgtgggtctcaccactttaggtgggatccatttccaaagtgtgagacccacatgagtttcatccaataagag 31602105  T
Q  238 agtgagtattagagagggtgttcaaaagagtgt 270  Q
    | ||||| |||||||| ||||| ||||||||||    
T  31602104 aatgagtgttagagagagtgttgaaaagagtgt 31602072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 168
Target Start/End: Original strand, 13388331 - 13388401
Alignment:
Q  100 gaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatg 168  Q
    |||||||||||||| | ||| ||||| || |||||||  | |||||||| |||||||||||||||||||||    
T  13388331 gaggaatgctagcaacactctcttttgaatactctctctaacactcacttttttattggatgaaatcaatg 13388401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 166
Target Start/End: Original strand, 50308787 - 50308822
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaa 166  Q
    |||||||||||||||||||||||||| |||||||||    
T  50308787 ctctctagcactcactcttttattgggtgaaatcaa 50308822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 11430629 - 11430568
Alignment:
Q  97 aaagaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattgg 156  Q
    ||||||||||||||||| | ||| ||||| | ||||||||  ||||||||||||||||||||    
T  11430629 aaagaggaatgctagcaacactctcttttgagcactctctctagcactcactcttttattgg 11430568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 221 - 267
Target Start/End: Complemental strand, 21466680 - 21466634
Alignment:
Q  221 atttaaaccaataagagagtgagtattagagagggtgttcaaaagag 267  Q
    ||||||| |||||||| ||||| |||||||||| |||||||||||||    
T  21466680 atttaaatcaataagaaagtgaatattagagagagtgttcaaaagag 21466634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 165
Target Start/End: Complemental strand, 21466751 - 21466687
Alignment:
Q  103 gaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatca 165  Q
    ||||||||||| |  ||||||||  |||||||||  |||||||||| ||||||||||||||||||    
T  21466751 gaatgctagcaacattcacttttgcacactctctttagcactcactattttattggatgaaatca 21466687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 29418522 - 29418591
Alignment:
Q  142 tcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtaga 211  Q
    ||||||||||||||||| |||| |||| || || ||||||||| |||  |||| |||| |||||||||||    
T  29418522 tcactcttttattggataaaattaatgtatatctcaccactttatgtgagttctatttccaaagtgtaga 29418591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 5602709 - 5602657
Alignment:
Q  132 tctctagcactcactcttttattggatgaaatcaatgcatgtcccaccacttt 184  Q
    |||||| |||| ||||| |||||||||||||| |||  |||||||||||||||    
T  5602709 tctctaacacttactctcttattggatgaaattaatatatgtcccaccacttt 5602657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 37915825 - 37915793
Alignment:
Q  123 tttcaacactctctagcactcactcttttattg 155  Q
    ||||||||||||||| |||||||||||||||||    
T  37915825 tttcaacactctctaacactcactcttttattg 37915793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 41095602 - 41095673
Alignment:
Q  99 agaggaatgctagcacctctcacttttcaacactct--ctagcactcactcttttattggatgaaatcaatg 168  Q
    ||||||||||||||| | ||| ||||| | ||||||  ||||||||||||  |||||||| |||||||||||    
T  41095602 agaggaatgctagcaacactctcttttgagcactctctctagcactcacttatttattgggtgaaatcaatg 41095673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 98; Significance: 4e-48; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 136 - 278
Target Start/End: Original strand, 27847 - 27991
Alignment:
Q  136 tagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataag 235  Q
    |||||||||| ||||||||||||| |||||||| ||||||||||||||||||| ||||| |||| ||||||||||||||||||| |||||||||||||||    
T  27847 tagcactcacgcttttattggatggaatcaatgtatgtcccaccactttgtgtgggttctatttccaaagtgtagacccacaatgatttaaaccaataag 27946  T
Q  236 agagtgagtattagagagggtgttcaaaaga--gtgttgctagca 278  Q
    ||||||||||||| |||| ||||||||||||  ||||||||||||    
T  27947 agagtgagtattaaagagagtgttcaaaagagggtgttgctagca 27991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 131 - 238
Target Start/End: Original strand, 9694 - 9801
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaacca 230  Q
    ||||||| |||||||| ||||||||||||||||||||| || |||||||| ||||||| ||||||||||| ||||||||||| ||||||||||||||| |    
T  9694 ctctctaacactcacttttttattggatgaaatcaatgtatatcccaccattttgtgtgggttcaattttaaaagtgtagactcacaataatttaaacga 9793  T
Q  231 ataagaga 238  Q
    ||||||||    
T  9794 ataagaga 9801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 131 - 238
Target Start/End: Original strand, 11240 - 11347
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaacca 230  Q
    ||||||| |||||||| ||||||||||||||||||||| || |||||||| ||||||| ||||||||||| ||||||||||| ||||||||||||||| |    
T  11240 ctctctaacactcacttttttattggatgaaatcaatgtatatcccaccattttgtgtgggttcaattttaaaagtgtagactcacaataatttaaacga 11339  T
Q  231 ataagaga 238  Q
    ||||||||    
T  11340 ataagaga 11347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 64; Significance: 8e-28; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 139 - 279
Target Start/End: Complemental strand, 27004 - 26862
Alignment:
Q  139 cactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagaga 238  Q
    |||||||||| ||||||||  ||||||||| |||| |||||||||||||| |||||||||||||||| ||||||||| |||  ||||||||||||| |||    
T  27004 cactcactctcttattggaataaatcaatgtatgttccaccactttgtgtgggttcaattttcaaagcgtagacccataatgctttaaaccaataaaaga 26905  T
Q  239 gtgagtattagagagggtgttcaaaa--gagtgttgctagcat 279  Q
    |||  | |||||||  ||| ||||||  |||||||||||||||    
T  26904 gtggatgttagagaaagtgctcaaaaacgagtgttgctagcat 26862  T

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Target: scaffold0099 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 146 - 208
Target Start/End: Original strand, 27358 - 27420
Alignment:
Q  146 tcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgt 208  Q
    ||||||||||| ||||||||||  ||||||||||||||| ||||||||| |||||||||||||    
T  27358 tcttttattgggtgaaatcaatatatgtcccaccactttatgtaggttccattttcaaagtgt 27420  T

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Target: scaffold0099; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 168
Target Start/End: Complemental strand, 27470 - 27430
Alignment:
Q  129 cactctctagcactcactctttt-attggatgaaatcaatg 168  Q
    ||||||||||||||||||||||| ||||| |||||||||||    
T  27470 cactctctagcactcactcttttaattgggtgaaatcaatg 27430  T

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Target: scaffold0016 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 204819 - 204706
Alignment:
Q  170 atgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagggtgttc--aaaagag 267  Q
    ||||| || ||||||||||  | |||||||| ||| |||||||  ||||| || ||||||||||| |||||||||| |||||||  |||||  |||||||    
T  204819 atgtctcatcactttgtgtctgatcaatttttaaattgtagacttacaattatataaaccaataaaagagtgagtactagagagaatgttcaaaaaagag 204720  T
Q  268 tgttgctagcatta 281  Q
    ||||||||||||||    
T  204719 tgttgctagcatta 204706  T

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Target: scaffold0838 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 131 - 227
Target Start/End: Original strand, 2252 - 2346
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaa 227  Q
    |||||||||||||||||||||||  ||||||||||||| ||||| ||| ||||||||| ||| | ||||| ||| |||||| ||||||| |||||||    
T  2252 ctctctagcactcactcttttataagatgaaatcaatgtatgtcacactactttgtgt-ggtgc-atttttaaaatgtagatccacaatgatttaaa 2346  T

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Target: scaffold0832 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 131 - 227
Target Start/End: Original strand, 2283 - 2377
Alignment:
Q  131 ctctctagcactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtagacccacaataatttaaa 227  Q
    |||||||||||||||||||||||  ||||||||||||| ||||| ||| ||||||||| ||| | ||||| ||| |||||| ||||||| |||||||    
T  2283 ctctctagcactcactcttttataagatgaaatcaatgtatgtcacactactttgtgt-ggtgc-atttttaaaatgtagatccacaatgatttaaa 2377  T

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Target: scaffold0008 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 121255 - 121199
Alignment:
Q  226 aaccaataagagagtgagtattagagagggtgttcaaa-agagtgttgctagcatta 281  Q
    ||||||||||||||||||||||||||||  | |||||| ||| ||||||||||||||    
T  121255 aaccaataagagagtgagtattagagagatttttcaaagagaatgttgctagcatta 121199  T

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Target: scaffold0155 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 210
Target Start/End: Original strand, 35632 - 35703
Alignment:
Q  139 cactcactcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaattttcaaagtgtag 210  Q
    |||||||||| ||||| ||||||||||||| |||||||| || ||| ||| ||||| ||| ||||| |||||    
T  35632 cactcactctcttatttgatgaaatcaatgtatgtcccatcattttatgtgggttccattctcaaaatgtag 35703  T

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Target: scaffold0194 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 267
Target Start/End: Complemental strand, 8552 - 8425
Alignment:
Q  144 actcttttattggatgaaatcaatgcatgtcccaccactttgtgtaggttcaatt----ttcaaagtgtagacccacaataatttaaaccaataagagag 239  Q
    |||||||||| |||||||||||||  ||||| ||||||||| ||| | |  || |    ||| |||||||||| || ||| |||||||||||||| |||     
T  8552 actcttttatgggatgaaatcaatatatgtctcaccactttatgttgatctaactaactttcgaagtgtagactcataatgatttaaaccaataaaagaa 8453  T
Q  240 tgagtattagagagggtgttcaaaagag 267  Q
    | ||||||| |||| || ||||||||||    
T  8452 ttagtattaaagagagtattcaaaagag 8425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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