View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6026_low_46 (Length: 239)
Name: NF6026_low_46
Description: NF6026
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6026_low_46 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 21 - 239
Target Start/End: Complemental strand, 41631399 - 41631181
Alignment:
| Q |
21 |
ctgacgaaggtggtcactttcctatgtcagttgctgttcctgaaggtagggtgcatggtggaagtctgatggcaatgctaactgcgggttccggtagtgg |
120 |
Q |
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| T |
41631399 |
ctgacgaaggtggtcactttcctatgtcagttgctgttcctgaaggtagggtgcatggtggaagtctgatggcaatgctaactgcgggttccggtagtgg |
41631300 |
T |
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| Q |
121 |
tacaaggacaagcaccgggaaaggtatagctaatattgatccatccatgccaatcaaaggttacaatgtcatgccccagagttggatttaaagctagtta |
220 |
Q |
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| T |
41631299 |
tacaaggacaagcaccgggaaaggtatagctaatattgatccatccatgccaatcaaaggttacaatgtcatgccccagagttggatttaaagctagtta |
41631200 |
T |
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| Q |
221 |
tcgtttctgttgttatggt |
239 |
Q |
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| T |
41631199 |
tcgattctgttgttatggt |
41631181 |
T |
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