View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6026_low_55 (Length: 202)
Name: NF6026_low_55
Description: NF6026
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6026_low_55 |
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Alignment Details
Target: chr8 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 22 - 186
Target Start/End: Original strand, 39235964 - 39236128
Alignment:
| Q |
22 |
acaccaagtattaggaaccaacaaaatataatcacaatcacaacctttctgtattaaaaacagattgatgcccccttggtggtgtaacagaatgatgact |
121 |
Q |
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| T |
39235964 |
acaccaagtattaggaaccaacaaaatataatcacaatcacaacctttctgtattaaaaacagattgatgcccccttggtggtgtaacagaatgatgact |
39236063 |
T |
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| Q |
122 |
aacataatcttcatttgttaacactggtgttcccaatccatcttcagtaccagctccaacatatt |
186 |
Q |
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| T |
39236064 |
aacataatcttcatttgttaacactggtgttcccaatccatcttcagtaccagctccaacatatt |
39236128 |
T |
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