View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6029_high_29 (Length: 244)
Name: NF6029_high_29
Description: NF6029
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6029_high_29 |
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Alignment Details
Target: chr6 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 9488876 - 9489100
Alignment:
| Q |
1 |
ggagacaaaagcttgggtaaaccaactcaatgaccagcttcagaaccgcgagttcgaagaagccaaaaaatagaacatttgatctaggagcattcatttt |
100 |
Q |
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| T |
9488876 |
ggagacaaaagcttgggtaaaccaacccaatgaccagcttcagaaccgcgagttcgaagaagccaaaaaatagaacatttgatctaggagcattcatttt |
9488975 |
T |
|
| Q |
101 |
ttctacaatgtgtttctttcaccttcaggacaaagtgaagcttttgcgatgagtattgttagttagttcaatagacaatgtatttgtgtgtttatgaatc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |
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| T |
9488976 |
ttctacaatgtgtttctttcaccttcaggacaaagtgaagcttttgcgatgagtattgttagtaagttcaatagacaatgtatttgtgtgtttaggaatc |
9489075 |
T |
|
| Q |
201 |
gttttaaatagaataagggtgagaa |
225 |
Q |
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||||||||||||||||||||||||| |
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| T |
9489076 |
gttttaaatagaataagggtgagaa |
9489100 |
T |
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