View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6030_high_10 (Length: 238)
Name: NF6030_high_10
Description: NF6030
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6030_high_10 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 37004833 - 37004596
Alignment:
| Q |
1 |
aggtcgtggtggataatgccagatggcgatcgggagtaccttgtggcagcttcagctcaaggtgttagaattggcggagggtgctggatggaggtggtgg |
100 |
Q |
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| T |
37004833 |
aggtcgtggtggataatgccaggtggcgatcgggagtaccttgtggcagcttcagctcaaggtgttagaattggcggagggtgctggatggaggtggtgg |
37004734 |
T |
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| Q |
101 |
aaggtatccggcagcgtgtgttgtcatggaggagaagggagagggagtcacatacaacggtggaaagggaaaataatatactatcccattcatcttaaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37004733 |
aaggtatccggcagcgtgtgttgtcatggaggagaagggagagggagtcacatacaacggtggaaagggaaaataatatactatcccattcatcttaaat |
37004634 |
T |
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| Q |
201 |
ccctctccttaaggtatattttaatattaaggcaagcc |
238 |
Q |
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| T |
37004633 |
ccagctccttagggtatatgttagtattagggcaagcc |
37004596 |
T |
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