View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6030_high_8 (Length: 245)
Name: NF6030_high_8
Description: NF6030
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6030_high_8 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 37004286 - 37004530
Alignment:
| Q |
1 |
tcatcaatacagtttacaaagcagctagagtgccaaaatatcatctatatattttcatttgaaattnnnnnnntaactgcaaagacgtggaagatgctag |
100 |
Q |
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| T |
37004286 |
tcatcaatacagtttacaaagcagctagagtgccaaaatatcatctatatattttcatttgaaattaaaaaaataactgcaaagacgtggaagatgctag |
37004385 |
T |
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| Q |
101 |
taaatctaaatattcgcaagtctaacagagacagaaacgacatggtattcaatcataaaaataatgtttattgtttgactgaacacaaaggggaagactg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37004386 |
taaatctaaatattcgcaagtctaacagagacagaaacgacatggtattcaatcataaaaataatgtttattgtttgactgaacacaaaggggaagactg |
37004485 |
T |
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| Q |
201 |
tgtttggtagctagaataagagaagatagatcaattggttatttt |
245 |
Q |
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||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
37004486 |
tgtttggtagctagaatcagagaagatagatcaattggttatttt |
37004530 |
T |
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