View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6030_low_2 (Length: 420)

Name: NF6030_low_2
Description: NF6030
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6030_low_2
NF6030_low_2
[»] chr8 (33 HSPs)
chr8 (213-420)||(9715298-9715502)
chr8 (1-213)||(25327664-25327876)
chr8 (1-213)||(10683739-10683951)
chr8 (1-206)||(6311723-6311928)
chr8 (1-213)||(18852627-18852840)
chr8 (33-215)||(30656102-30656284)
chr8 (1-213)||(18870021-18870234)
chr8 (21-213)||(7289427-7289620)
chr8 (21-213)||(33037287-33037480)
chr8 (33-213)||(36979834-36980014)
chr8 (1-213)||(39784325-39784537)
chr8 (33-213)||(4759534-4759714)
chr8 (1-151)||(10688661-10688811)
chr8 (33-200)||(1261428-1261595)
chr8 (33-213)||(3439088-3439267)
chr8 (1-208)||(35745766-35745973)
chr8 (33-205)||(26288336-26288508)
chr8 (33-205)||(26301593-26301765)
chr8 (33-205)||(26313587-26313759)
chr8 (35-201)||(2627331-2627497)
chr8 (49-213)||(7412787-7412952)
chr8 (28-213)||(42575723-42575909)
chr8 (91-205)||(31042917-31043031)
chr8 (33-214)||(15290142-15290324)
chr8 (33-214)||(15470511-15470693)
chr8 (156-213)||(10688618-10688675)
chr8 (156-213)||(25689561-25689618)
chr8 (156-207)||(5701958-5702009)
chr8 (33-151)||(25689604-25689721)
chr8 (156-201)||(4456575-4456620)
chr8 (156-200)||(23799105-23799149)
chr8 (155-201)||(19175237-19175283)
chr8 (69-127)||(31217920-31217978)
[»] chr4 (39 HSPs)
chr4 (1-213)||(9223899-9224111)
chr4 (1-213)||(9228686-9228898)
chr4 (20-216)||(51520857-51521053)
chr4 (1-174)||(18712294-18712467)
chr4 (1-213)||(56141511-56141724)
chr4 (1-213)||(3814394-3814605)
chr4 (33-213)||(24742397-24742577)
chr4 (1-213)||(5733034-5733247)
chr4 (1-213)||(18856097-18856309)
chr4 (1-213)||(45347317-45347529)
chr4 (28-213)||(8392982-8393167)
chr4 (33-151)||(29761078-29761196)
chr4 (1-120)||(45356891-45357010)
chr4 (49-201)||(13992714-13992866)
chr4 (33-201)||(31495721-31495889)
chr4 (33-201)||(7122279-7122447)
chr4 (33-201)||(7124501-7124669)
chr4 (33-213)||(8395191-8395371)
chr4 (33-201)||(28467990-28468158)
chr4 (138-213)||(18860446-18860521)
chr4 (34-213)||(5135649-5135829)
chr4 (34-213)||(5137875-5138055)
chr4 (137-201)||(31985140-31985204)
chr4 (153-208)||(8689042-8689097)
chr4 (154-208)||(5143807-5143861)
chr4 (156-201)||(29761182-29761227)
chr4 (137-208)||(5148225-5148296)
chr4 (156-206)||(16628353-16628403)
chr4 (156-206)||(38151918-38151968)
chr4 (157-206)||(3778116-3778165)
chr4 (155-207)||(5268698-5268750)
chr4 (156-208)||(6742894-6742946)
chr4 (156-206)||(10047932-10047982)
chr4 (156-206)||(16622774-16622824)
chr4 (156-207)||(54867745-54867796)
chr4 (156-201)||(36314716-36314761)
chr4 (156-201)||(36328925-36328970)
chr4 (156-206)||(9194164-9194215)
chr4 (156-201)||(5396177-5396221)
[»] chr2 (27 HSPs)
chr2 (1-213)||(39811477-39811689)
chr2 (33-213)||(11098387-11098567)
chr2 (33-213)||(14291945-14292125)
chr2 (33-213)||(9295862-9296042)
chr2 (33-202)||(4484742-4484911)
chr2 (35-201)||(25410087-25410253)
chr2 (49-201)||(3492212-3492364)
chr2 (33-213)||(12647787-12647967)
chr2 (1-208)||(19344797-19345004)
chr2 (49-201)||(30832934-30833086)
chr2 (1-200)||(19349655-19349854)
chr2 (33-201)||(32289161-32289329)
chr2 (129-213)||(44310471-44310555)
chr2 (137-213)||(32247276-32247352)
chr2 (35-201)||(6266287-6266453)
chr2 (49-201)||(40739292-40739444)
chr2 (1-84)||(32247161-32247244)
chr2 (156-206)||(8389631-8389681)
chr2 (154-208)||(36757423-36757477)
chr2 (154-213)||(28258669-28258729)
chr2 (156-207)||(33528104-33528155)
chr2 (156-206)||(10706733-10706783)
chr2 (156-206)||(21630511-21630561)
chr2 (156-206)||(39483443-39483493)
chr2 (162-207)||(20522794-20522839)
chr2 (156-206)||(23077952-23078002)
chr2 (49-125)||(28258739-28258815)
[»] chr7 (42 HSPs)
chr7 (1-213)||(12406645-12406857)
chr7 (1-213)||(31109070-31109283)
chr7 (1-217)||(4873509-4873725)
chr7 (1-201)||(24023831-24024031)
chr7 (21-213)||(21640230-21640423)
chr7 (34-214)||(20357027-20357207)
chr7 (33-214)||(2058425-2058605)
chr7 (1-213)||(12397293-12397492)
chr7 (33-201)||(24789439-24789607)
chr7 (1-213)||(24265677-24265889)
chr7 (1-213)||(16880448-16880660)
chr7 (1-213)||(16885303-16885515)
chr7 (8-201)||(21811751-21811944)
chr7 (33-201)||(18414094-18414262)
chr7 (33-201)||(43504540-43504708)
chr7 (33-213)||(6592741-6592921)
chr7 (33-213)||(32060708-32060888)
chr7 (33-213)||(20343500-20343680)
chr7 (37-201)||(21646466-21646630)
chr7 (33-201)||(39730946-39731114)
chr7 (33-213)||(6594957-6595137)
chr7 (33-201)||(18409218-18409386)
chr7 (49-201)||(48408411-48408563)
chr7 (136-213)||(1562510-1562587)
chr7 (33-213)||(24260821-24261001)
chr7 (49-217)||(2479795-2479964)
chr7 (33-170)||(1532947-1533084)
chr7 (33-213)||(18392600-18392780)
chr7 (49-213)||(47264102-47264267)
chr7 (140-201)||(1532897-1532958)
chr7 (49-201)||(25767381-25767527)
chr7 (137-213)||(44847619-44847696)
chr7 (137-208)||(21983790-21983861)
chr7 (137-213)||(21989454-21989531)
chr7 (156-206)||(79955-80005)
chr7 (155-200)||(49092237-49092282)
chr7 (33-105)||(1562407-1562479)
chr7 (157-213)||(18390506-18390562)
chr7 (156-207)||(46515808-46515860)
chr7 (137-171)||(4509335-4509369)
chr7 (137-171)||(4511177-4511211)
chr7 (137-171)||(6431467-6431501)
[»] chr6 (46 HSPs)
chr6 (1-213)||(14741926-14742138)
chr6 (1-213)||(22010189-22010401)
chr6 (1-213)||(11857355-11857567)
chr6 (46-213)||(30125018-30125185)
chr6 (1-151)||(14737128-14737278)
chr6 (1-213)||(6438871-6439083)
chr6 (1-208)||(16839118-16839325)
chr6 (33-213)||(16578921-16579101)
chr6 (33-213)||(16616279-16616459)
chr6 (1-208)||(33329938-33330145)
chr6 (1-208)||(6005794-6006001)
chr6 (33-213)||(16554454-16554634)
chr6 (33-213)||(16631010-16631190)
chr6 (1-208)||(33335435-33335642)
chr6 (33-201)||(5674242-5674410)
chr6 (33-151)||(5266492-5266610)
chr6 (49-200)||(2171939-2172090)
chr6 (1-120)||(28155164-28155283)
chr6 (33-201)||(22709464-22709632)
chr6 (1-213)||(5343852-5344064)
chr6 (46-201)||(27647480-27647635)
chr6 (33-213)||(6136367-6136547)
chr6 (34-213)||(6026834-6027013)
chr6 (33-216)||(25420794-25420977)
chr6 (33-201)||(411698-411867)
chr6 (33-201)||(3073162-3073330)
chr6 (33-213)||(33342507-33342688)
chr6 (33-201)||(34166678-34166847)
chr6 (33-201)||(13150861-13151030)
chr6 (156-216)||(5266596-5266656)
chr6 (156-214)||(14737084-14737142)
chr6 (49-213)||(23896792-23896957)
chr6 (137-201)||(26253602-26253666)
chr6 (33-201)||(34164456-34164625)
chr6 (136-201)||(6097908-6097973)
chr6 (158-213)||(28155090-28155145)
chr6 (156-213)||(16652716-16652773)
chr6 (136-201)||(34151840-34151905)
chr6 (156-207)||(5016975-5017026)
chr6 (156-207)||(31085952-31086003)
chr6 (156-215)||(5571747-5571806)
chr6 (156-208)||(24714938-24714991)
chr6 (156-207)||(18234650-18234701)
chr6 (49-119)||(5757046-5757116)
chr6 (156-185)||(603772-603801)
chr6 (137-177)||(5413942-5413982)
[»] scaffold0135 (1 HSPs)
scaffold0135 (1-213)||(34554-34766)
[»] chr5 (51 HSPs)
chr5 (1-213)||(1456638-1456850)
chr5 (20-213)||(27450216-27450409)
chr5 (20-213)||(27445373-27445566)
chr5 (35-213)||(29402550-29402728)
chr5 (20-214)||(43599124-43599319)
chr5 (20-214)||(43604616-43604811)
chr5 (20-214)||(43610108-43610303)
chr5 (1-213)||(15045068-15045279)
chr5 (33-213)||(30631768-30631948)
chr5 (1-213)||(28807076-28807288)
chr5 (20-151)||(43592679-43592811)
chr5 (1-208)||(33768559-33768766)
chr5 (1-208)||(33791691-33791898)
chr5 (33-200)||(24136303-24136470)
chr5 (1-208)||(2785750-2785957)
chr5 (1-208)||(31396495-31396702)
chr5 (20-151)||(31180656-31180787)
chr5 (1-213)||(37560947-37561159)
chr5 (33-213)||(10592844-10593023)
chr5 (33-201)||(18442052-18442220)
chr5 (33-213)||(22536672-22536852)
chr5 (33-201)||(26177479-26177647)
chr5 (1-208)||(31401352-31401559)
chr5 (33-201)||(9789628-9789796)
chr5 (33-201)||(29719978-29720147)
chr5 (34-201)||(16407654-16407821)
chr5 (33-213)||(37556125-37556305)
chr5 (33-201)||(16409090-16409258)
chr5 (35-201)||(29722165-29722332)
chr5 (33-201)||(25077718-25077886)
chr5 (33-201)||(25135687-25135855)
chr5 (33-201)||(26170370-26170538)
chr5 (33-213)||(40379678-40379858)
chr5 (91-201)||(29752267-29752377)
chr5 (33-213)||(16546216-16546396)
chr5 (33-213)||(40381889-40382069)
chr5 (49-201)||(9352820-9352972)
chr5 (137-201)||(15465048-15465112)
chr5 (33-213)||(16543994-16544174)
chr5 (156-213)||(31180773-31180830)
chr5 (156-213)||(43592797-43592854)
chr5 (137-201)||(36931856-36931920)
chr5 (156-208)||(14520796-14520848)
chr5 (91-201)||(29751601-29751711)
chr5 (164-205)||(35388196-35388237)
chr5 (33-125)||(38219849-38219941)
chr5 (170-213)||(43625605-43625648)
chr5 (156-206)||(12083658-12083708)
chr5 (156-201)||(11916457-11916502)
chr5 (33-84)||(29751564-29751615)
chr5 (137-177)||(25412396-25412436)
[»] scaffold0355 (1 HSPs)
scaffold0355 (1-213)||(3337-3549)
[»] chr3 (72 HSPs)
chr3 (20-213)||(28501152-28501345)
chr3 (20-213)||(28503319-28503512)
chr3 (33-213)||(7167702-7167882)
chr3 (1-213)||(22172662-22172874)
chr3 (33-213)||(40372256-40372436)
chr3 (1-213)||(18656816-18657029)
chr3 (33-213)||(8477822-8478002)
chr3 (33-197)||(27352097-27352261)
chr3 (1-213)||(8512615-8512827)
chr3 (1-201)||(2672431-2672631)
chr3 (1-213)||(8517495-8517707)
chr3 (1-201)||(2676587-2676787)
chr3 (33-167)||(2671111-2671245)
chr3 (33-213)||(6716085-6716265)
chr3 (28-215)||(54634708-54634895)
chr3 (4-213)||(24968495-24968704)
chr3 (33-151)||(8738585-8738703)
chr3 (33-151)||(9090823-9090941)
chr3 (49-201)||(1306439-1306591)
chr3 (33-213)||(25637013-25637193)
chr3 (1-206)||(32475859-32476064)
chr3 (1-206)||(32480717-32480922)
chr3 (33-214)||(4601147-4601329)
chr3 (35-201)||(800698-800864)
chr3 (33-213)||(4598926-4599107)
chr3 (136-213)||(3617034-3617111)
chr3 (49-201)||(23200564-23200716)
chr3 (49-201)||(26928093-26928245)
chr3 (49-201)||(33386150-33386302)
chr3 (49-201)||(23198365-23198517)
chr3 (49-201)||(37726134-37726286)
chr3 (33-214)||(10208777-10208959)
chr3 (33-201)||(10055817-10055986)
chr3 (33-201)||(10058039-10058208)
chr3 (33-201)||(10060261-10060430)
chr3 (33-201)||(10062483-10062652)
chr3 (33-201)||(10064705-10064874)
chr3 (33-201)||(10066927-10067096)
chr3 (33-213)||(10210978-10211159)
chr3 (91-201)||(7782589-7782699)
chr3 (49-201)||(37408049-37408200)
chr3 (49-201)||(27453416-27453568)
chr3 (156-213)||(6718288-6718345)
chr3 (154-214)||(27974432-27974493)
chr3 (156-213)||(45282585-45282642)
chr3 (162-214)||(8738541-8738593)
chr3 (162-214)||(9090779-9090831)
chr3 (156-208)||(21711768-21711820)
chr3 (156-208)||(27027273-27027325)
chr3 (154-201)||(32143868-32143915)
chr3 (155-206)||(36029658-36029709)
chr3 (156-206)||(30709266-30709316)
chr3 (156-201)||(40734087-40734132)
chr3 (156-208)||(39032023-39032075)
chr3 (154-205)||(27985966-27986017)
chr3 (33-151)||(6718331-6718449)
chr3 (156-206)||(16264896-16264946)
chr3 (163-207)||(1730915-1730959)
chr3 (156-208)||(27038608-27038660)
chr3 (49-125)||(32143782-32143858)
chr3 (156-207)||(40592251-40592302)
chr3 (156-206)||(35926057-35926106)
chr3 (156-206)||(48438782-48438832)
chr3 (156-213)||(16498637-16498694)
chr3 (156-201)||(40735018-40735063)
chr3 (156-206)||(24694655-24694706)
chr3 (155-201)||(40845220-40845266)
chr3 (33-151)||(45282628-45282746)
chr3 (156-185)||(43404486-43404515)
chr3 (137-177)||(9634816-9634856)
chr3 (49-125)||(27986027-27986103)
chr3 (162-206)||(47923327-47923371)
[»] chr1 (31 HSPs)
chr1 (1-213)||(39445870-39446082)
chr1 (1-213)||(44023377-44023589)
chr1 (1-213)||(1054514-1054726)
chr1 (1-201)||(41390974-41391173)
chr1 (1-213)||(25439399-25439611)
chr1 (1-213)||(25444592-25444804)
chr1 (33-201)||(20622640-20622808)
chr1 (33-151)||(24793709-24793827)
chr1 (49-201)||(19360925-19361077)
chr1 (1-125)||(41398629-41398753)
chr1 (51-205)||(19365777-19365931)
chr1 (33-213)||(44203218-44203398)
chr1 (33-213)||(9036003-9036183)
chr1 (33-125)||(24786913-24787005)
chr1 (1-208)||(43987954-43988161)
chr1 (33-213)||(21053540-21053721)
chr1 (33-197)||(51765007-51765171)
chr1 (33-201)||(40281971-40282140)
chr1 (49-201)||(9986798-9986950)
chr1 (91-201)||(24202264-24202374)
chr1 (137-201)||(13604108-13604172)
chr1 (156-214)||(24793665-24793723)
chr1 (156-207)||(13598967-13599018)
chr1 (156-201)||(21536125-21536170)
chr1 (156-201)||(41398764-41398809)
chr1 (156-200)||(37070334-37070378)
chr1 (137-208)||(26644379-26644450)
chr1 (156-213)||(3282273-3282331)
chr1 (156-213)||(13659840-13659897)
chr1 (156-197)||(16124197-16124238)
chr1 (156-193)||(29652381-29652418)
[»] scaffold0464 (1 HSPs)
scaffold0464 (1-213)||(733-945)
[»] scaffold0665 (2 HSPs)
scaffold0665 (12-151)||(8091-8230)
scaffold0665 (156-214)||(8216-8274)
[»] scaffold0286 (1 HSPs)
scaffold0286 (34-200)||(21953-22119)
[»] scaffold0259 (1 HSPs)
scaffold0259 (1-213)||(1739-1951)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-213)||(148444-148656)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-206)||(176457-176662)
[»] scaffold0197 (2 HSPs)
scaffold0197 (1-213)||(13784-13996)
scaffold0197 (1-208)||(18669-18876)
[»] scaffold0188 (1 HSPs)
scaffold0188 (35-201)||(17444-17610)
[»] scaffold0674 (1 HSPs)
scaffold0674 (33-213)||(4130-4310)
[»] scaffold0565 (1 HSPs)
scaffold0565 (33-216)||(3005-3188)
[»] scaffold0491 (2 HSPs)
scaffold0491 (33-201)||(11573-11740)
scaffold0491 (33-201)||(9128-9295)
[»] scaffold1455 (1 HSPs)
scaffold1455 (138-214)||(1708-1784)
[»] scaffold1519 (1 HSPs)
scaffold1519 (69-177)||(519-627)
[»] scaffold0140 (1 HSPs)
scaffold0140 (137-201)||(7924-7988)
[»] scaffold0006 (4 HSPs)
scaffold0006 (137-201)||(132765-132829)
scaffold0006 (156-207)||(6252-6303)
scaffold0006 (156-207)||(3060-3111)
scaffold0006 (156-213)||(149601-149658)
[»] scaffold0137 (1 HSPs)
scaffold0137 (138-213)||(5859-5934)
[»] scaffold0510 (1 HSPs)
scaffold0510 (49-213)||(1083-1248)
[»] scaffold0087 (2 HSPs)
scaffold0087 (49-201)||(43447-43599)
scaffold0087 (154-208)||(36330-36384)
[»] scaffold0098 (1 HSPs)
scaffold0098 (154-201)||(45744-45791)
[»] scaffold0036 (1 HSPs)
scaffold0036 (156-206)||(86153-86204)


Alignment Details
Target: chr8 (Bit Score: 178; Significance: 7e-96; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 213 - 420
Target Start/End: Original strand, 9715298 - 9715502
Alignment:
Q  213 actatagggttgtatatgacatatttttgtttatgatgttttagcaagtgatcaactttgaaattgttgcagtaataccatcaccatgcaagagggtgac 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||    
T  9715298 actatagggttgtatatgacatatttttgtttatgatgttttagcaagtgatcaactttgaaattgttgcagtaatacca---ccatgcaagagggtgac 9715394  T
Q  313 atagaacaagcttttgagggagaccaaagcaaagatcaactcatgaaagcattgtgtcattcgcaaacacgtgcgagggaagcagaggagttagcaaaac 412  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  9715395 atagaacaagcttttgagggagaccaaagcaaaaatcaactaatggaagcattgtgtcattcgcaaacgcgtgcgagggaagcagaggagttagcaaaac 9715494  T
Q  413 aggcttat 420  Q
    ||||||||    
T  9715495 aggcttat 9715502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 25327876 - 25327664
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||| ||||||||| |||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||     
T  25327876 tgtcacgagctgcaacggacccaaggttgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccat 25327777  T
Q  101 aatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 200  Q
     |||||||||||||||||||||||| | |||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25327776 gatttggcgtcctgcaaactagctcacagccacttgaaatcgtgccacgaagccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 25327677  T
Q  201 gtcaatttcaaca 213  Q
    | |||| ||||||    
T  25327676 gccaatatcaaca 25327664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 10683951 - 10683739
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||||| ||| | |  ||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10683951 tgtcacgatctgcaacggtccccaagttgaccagtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 10683852  T
Q  101 aatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 200  Q
     |||||||||||||||||||||||| | ||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10683851 gatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 10683752  T
Q  201 gtcaatttcaaca 213  Q
    | |||| ||||||    
T  10683751 gccaatatcaaca 10683739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 6311723 - 6311928
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    ||||||||| |||| | | |||||||  ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6311723 tgtcacgatttgcatctgacccaaggttgacaagtccttattagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 6311822  T
Q  101 aatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 200  Q
     |||||||||||||||||||||||| | ||  ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  6311823 gatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcatgatttctctgttcttccagaccacaaatttgaa 6311922  T
Q  201 gtcaat 206  Q
    | ||||    
T  6311923 gccaat 6311928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 18852840 - 18852627
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggca-gacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgcca 99  Q
    |||||||||||||  | | ||||||| | ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18852840 tgtcacgatctgcgtctgacccaaggtatgaccagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgcca 18852741  T
Q  100 caatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 199  Q
    | |||||||||||||||||||||||| | ||  ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  18852740 cgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtatcacgatttctctgttcttccagaccacaaatttga 18852641  T
Q  200 agtcaatttcaaca 213  Q
    || |||| ||||||    
T  18852640 agccaatatcaaca 18852627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 33 - 215
Target Start/End: Original strand, 30656102 - 30656284
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||      
T  30656102 agtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcac 30656201  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaacact 215  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  30656202 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacact 30656284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 18870234 - 18870021
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggca-gacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgcca 99  Q
    |||||||||||||  | | ||||||| | ||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18870234 tgtcacgatctgcgtctgacccaaggtatgaccagtccttattagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgcca 18870135  T
Q  100 caatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 199  Q
    | |||||||||||||||||||||||| |  |  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18870134 cgatttggcgtcctgcaaactagctcacgacatcttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 18870035  T
Q  200 agtcaatttcaaca 213  Q
    || |||| ||||||    
T  18870034 agccaatatcaaca 18870021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 21 - 213
Target Start/End: Complemental strand, 7289620 - 7289427
Alignment:
Q  21 ccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaact 120  Q
    |||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||    
T  7289620 ccaaggtagacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgtcacgatttggcgtcctgcaaact 7289521  T
Q  121 agctctctgc-cacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    |||||   || | ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  7289520 agctcatggctcccttgaaatcgtgtcacgatgccaaaatcgtgtcactatttctctgttcttccagaccacaaatttgaagtcaatatcaaca 7289427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 21 - 213
Target Start/End: Complemental strand, 33037480 - 33037287
Alignment:
Q  21 ccaaggca-gacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaac 119  Q
    |||||||| ||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  33037480 ccaaggcatgaccagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaac 33037381  T
Q  120 tagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    |||||| | ||  || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  33037380 tagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 33037287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 36979834 - 36980014
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| | ||      
T  36979834 agtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcac 36979933  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  36979934 ctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 36980014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 39784537 - 39784325
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||||| ||| |||  ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  39784537 tgtcacgatctgcaacggtccccaggttgaccagtccttatcagtgatacttaaccaacaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 39784438  T
Q  101 aatttggcgtcctgcaaac-tagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 199  Q
     |||| || ||| |||||| | |||| | | ||| |  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  39784437 gattttgcatccagcaaacttggctcac-ggcacctccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 39784339  T
Q  200 agtcaatttcaaca 213  Q
    || |||||||||||    
T  39784338 agccaatttcaaca 39784325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 4759714 - 4759534
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  |||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||      
T  4759714 agtccttatcaaggatacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcac 4759615  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    || ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  4759614 ctcgaaatcgtgtcacgatgtcaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 4759534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 10688811 - 10688661
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    ||||||||| |||| | | |||||||  ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10688811 tgtcacgatttgcatctgacccaaggttgacaagtccttattagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 10688712  T
Q  101 aatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcacgat 151  Q
     |||||||||||||||||||||||| | ||  |||||||||||||||||||    
T  10688711 gatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgat 10688661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 33 - 200
Target Start/End: Complemental strand, 1261595 - 1261428
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  |||||||||| |||||||||   |||||||||||||||||||||||||||| ||| |||||||  ||||||||||||||| | ||      
T  1261595 agtccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaactagctcacggcat 1261496  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 200  Q
    |  |||||||||||||||| ||||| ||||||| |||||||| |||||||||| ||||||||||||||    
T  1261495 cacgaaatcgtgtcacgatgccaaattcgtgtcgcgatttctgtgttcttccaaaccacaaatttgaa 1261428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 3439267 - 3439088
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  |||||||||| ||||||||||   |||||||||||||||||||| |||||| ||| |||| ||  ||||||| ||||||| | ||      
T  3439267 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaacctagctcacggcac 3439169  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    |  |||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||    
T  3439168 cccgaaatcgtgtcacgatgccacaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagacaatctcaaca 3439088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 35745766 - 35745973
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||||| ||| |||  ||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35745766 tgtcacgatctgcaacggtccccaggttgaccagtccttatcatagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 35745865  T
Q  101 aatttggcgtcctgcaaac-tagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 199  Q
     |||| || |||  ||||| | |||| | | ||  |   |||||||||||||  | |||||| | ||||||| ||||||||||||| |||||||||||||    
T  35745866 gattttgcttccaacaaacttggctcac-ggcatctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttga 35745964  T
Q  200 agtcaattt 208  Q
    || ||||||    
T  35745965 agccaattt 35745973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 33 - 205
Target Start/End: Original strand, 26288336 - 26288508
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  || ||||||| |||||||||   ||| |||||||||||||||||||| ||| ||| |||||||  ||||||||| ||||| | ||      
T  26288336 agtccttatcatggaaacttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacggcat 26288435  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaa 205  Q
    |   ||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  26288436 cacaaaatcatgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaa 26288508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 33 - 205
Target Start/End: Original strand, 26301593 - 26301765
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  || ||||||| |||||||||   ||| |||||||||||||||||||| ||| ||| |||||||  ||||||||| ||||| | ||      
T  26301593 agtccttatcatggaaacttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacggcat 26301692  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaa 205  Q
    |   ||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  26301693 cacaaaatcatgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaa 26301765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 33 - 205
Target Start/End: Original strand, 26313587 - 26313759
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  || ||||||| |||||||||   ||| |||||||||||||||||||| ||| ||| |||||||  ||||||||| ||||| | ||      
T  26313587 agtccttatcatggaaacttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacggcat 26313686  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaa 205  Q
    |   ||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  26313687 cacaaaatcatgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaa 26313759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 35 - 201
Target Start/End: Complemental strand, 2627497 - 2627331
Alignment:
Q  35 tccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgccact 134  Q
    |||||||||  || ||||||| |||||||||   ||||||||||||||||||||| |||||| ||| |||||||  | ||||||| ||||| | |   |     
T  2627497 tccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccatgcaaaccagctcacggaatca 2627398  T
Q  135 tgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
     |||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  2627397 cgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 2627331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 49 - 213
Target Start/End: Original strand, 7412787 - 7412952
Alignment:
Q  49 acttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgccacttga-aatcgtgtca 147  Q
    |||||||||||||||||   ||||||||||||||||| ||| || || |||| ||||| |  ||||||||| ||||| | || | |  | ||||||||||    
T  7412787 acttaaccagcaagtttgaaaatcgtgtcacgatttcacaaaattgtaccacgatttgacaccctgcaaaccagctcacggc-attacagaatcgtgtca 7412885  T
Q  148 cgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtc-aatttcaaca 213  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  7412886 cgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagtcaaatttcaaca 7412952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 28 - 213
Target Start/End: Original strand, 42575723 - 42575909
Alignment:
Q  28 agacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgattt-cccaagatcgtgccacaatttggcgtcctgcaaac-tagctc 125  Q
    |||| |||||||||||  |||||||||| |||||||||||  ||||||||||||||| ||||| |||||| ||| |||||    ||||||| | || |||    
T  42575723 agaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgatttgcacccctgcaaccctaactc 42575822  T
Q  126 tctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
     | ||  |  ||||||||||| |||| ||||||||||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  42575823 acggcatcc-gaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 42575909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 91 - 205
Target Start/End: Complemental strand, 31043031 - 31042917
Alignment:
Q  91 atcgtgccacaatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagacca 190  Q
    |||||| ||| |||||||  ||||||||| ||||| | ||  |  |||||||||||||||| ||||| |||||||||||||||||| |||||||||||||    
T  31043031 atcgtgtcacgatttggcaccctgcaaaccagctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctattcttccagacca 31042932  T
Q  191 caaatttgaagtcaa 205  Q
    |||||||||||||||    
T  31042931 caaatttgaagtcaa 31042917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 33 - 214
Target Start/End: Complemental strand, 15290324 - 15290142
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgattt-cccaagatcgtgccacaatttggcgtcctgcaaac-tagctctctgc 130  Q
    |||||||||||  |||||||||| |||||||||||  ||||||||||||||| ||||| |||||| ||| |||||    ||||||| | || ||| | ||    
T  15290324 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcacggc 15290225  T
Q  131 cacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaacac 214  Q
      |  ||||||||||| | || ||||||||||||||||||||| ||||||||||| ||||||||||||||| |||| |||||||    
T  15290224 atcc-gaaatcgtgtcgcaatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaacac 15290142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 33 - 214
Target Start/End: Complemental strand, 15470693 - 15470511
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgattt-cccaagatcgtgccacaatttggcgtcctgcaaac-tagctctctgc 130  Q
    |||||||||||  |||||||||| |||||||||||  ||||||||||||||| ||||| |||||| ||| |||||    ||||||| | || ||| | ||    
T  15470693 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcacggc 15470594  T
Q  131 cacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaacac 214  Q
      |  ||||||||||| | || ||||||||||||||||||||| ||||||||||| ||||||||||||||| |||| |||||||    
T  15470593 atcc-gaaatcgtgtcgcaatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaacac 15470511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 10688675 - 10688618
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  10688675 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 10688618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 25689618 - 25689561
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  25689618 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagacaatctcaaca 25689561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 5702009 - 5701958
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatt 207  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  5702009 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatt 5701958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 33 - 151
Target Start/End: Complemental strand, 25689721 - 25689604
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  |||||||||| ||||||||||   ||||||| |||||||||||  |||||||||| |||| ||  ||||||| ||||||| | | ||    
T  25689721 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtgacgatttcccacaatcgtgccacgattttgcaccctgcaacctagctcac-ggca 25689623  T
Q  133 cttgaaatcgtgtcacgat 151  Q
    |  ||||||||||||||||    
T  25689622 cccgaaatcgtgtcacgat 25689604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 4456575 - 4456620
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||    
T  4456575 aaatcgtgtcacgatttctttgttcttccaaaccacaaatttgaag 4456620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 200
Target Start/End: Complemental strand, 23799149 - 23799105
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 200  Q
    ||||||||| ||||||||||||||||| || ||||||||||||||    
T  23799149 aaatcgtgttacgatttctctgttctttcaaaccacaaatttgaa 23799105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 19175283 - 19175237
Alignment:
Q  155 aaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    ||||||||| |||||||| |||||||||||| ||| |||||||||||    
T  19175283 aaaatcgtgacacgatttttctgttcttccaaaccgcaaatttgaag 19175237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 31217978 - 31217920
Alignment:
Q  69 aatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctc 127  Q
    ||||||||||||||||||||| |||||| ||||||| | || |||| |||| |||||||    
T  31217978 aatcgtgtcacgatttcccaaaatcgtgtcacaattggacgccctgaaaaccagctctc 31217920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 177; Significance: 3e-95; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 9224111 - 9223899
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  9224111 tgtcacgatctgcaacggacccaaggtagacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 9224012  T
Q  101 aatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 200  Q
     |||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9224011 gatttggcgtcctgcaaactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 9223912  T
Q  201 gtcaatttcaaca 213  Q
    | |||| ||||||    
T  9223911 gccaatatcaaca 9223899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 9228898 - 9228686
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  9228898 tgtcacgatctgcaacggacccaaggtagacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 9228799  T
Q  101 aatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 200  Q
     |||||||||||||||||| ||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9228798 gatttggcgtcctgcaaacgagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 9228699  T
Q  201 gtcaatttcaaca 213  Q
    | |||| ||||||    
T  9228698 gccaatatcaaca 9228686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 20 - 216
Target Start/End: Original strand, 51520857 - 51521053
Alignment:
Q  20 cccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaac 119  Q
    ||||||| |||  |||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  51520857 cccaaggtagatcagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcatgatttcccaagatcgtgccacgatttggcgtcctgcaaac 51520956  T
Q  120 tagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaacacta 216  Q
    |||||| | ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  51520957 tagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacacta 51521053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 18712467 - 18712294
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    ||||||||||| |||||| |||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18712467 tgtcacgatcttcaacggacccaaggttgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 18712368  T
Q  101 aatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttct 174  Q
     |||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||    
T  18712367 gatttggcgtcctgcaaactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttct 18712294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 56141724 - 56141511
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    ||||||||| |||| | | ||||||| |||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  56141724 tgtcacgatttgcatctgacccaaggtagaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 56141625  T
Q  101 -aatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 199  Q
     | ||||||||||||||||||||||| |  || ||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  56141624 gattttggcgtcctgcaaactagctcacgacccctccaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 56141525  T
Q  200 agtcaatttcaaca 213  Q
    || |||| ||||||    
T  56141524 agccaatatcaaca 56141511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 3814394 - 3814605
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    ||||||||||||||||||  |  |||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  3814394 tgtcacgatctgcaacggttctcaggttgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa-atcgtgacac 3814492  T
Q  101 aatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 200  Q
     |||||||||| |||||||| |||  | | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3814493 gatttggcgtcttgcaaacttgcttacggtcacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 3814592  T
Q  201 gtcaatttcaaca 213  Q
    | |||| ||||||    
T  3814593 gccaatatcaaca 3814605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 24742397 - 24742577
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||      
T  24742397 agtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcac 24742496  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  24742497 ctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 24742577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 5733034 - 5733247
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||||| ||| |||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  5733034 tgtcacgatctgcaacggtccccaggttgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcac 5733133  T
Q  101 aatttggcgtcctgcaaactagc-tctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 199  Q
     ||||||||||||||||||| || || | ||  |  |||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||    
T  5733134 gatttggcgtcctgcaaacttgcttcacggcaccacgaaatcgtgtcacgatgccaaaatcgtgtcatgatttctctgttctttcagaccacaaatttga 5733233  T
Q  200 agtcaatttcaaca 213  Q
    || |||| ||||||    
T  5733234 agccaatatcaaca 5733247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 18856097 - 18856309
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    ||||||||||||||||||  || |||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18856097 tgtcacgatctgcaacggttcccaggttgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcttgccac 18856196  T
Q  101 aatttggcgtcctgcaaac-tagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 199  Q
     |||| || ||| |||||| | |||| | | ||| |  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18856197 gattttgcatccagcaaacttggctcac-ggcacctccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 18856295  T
Q  200 agtcaatttcaaca 213  Q
    || |||||||||||    
T  18856296 agccaatttcaaca 18856309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 45347529 - 45347317
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    ||||||||||||||||||  || |||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45347529 tgtcacgatctgcaacggttcccaggttgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 45347430  T
Q  101 aatttggcgtcctgcaaac-tagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 199  Q
     |||| || ||| |||||| | |||| | | ||  |  |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  45347429 gattttgcatccagcaaacttggctcac-ggcatctctaatcgtgtcacgattccaaaatcgtgtcacgatttctttgttcttccagaccacaaatttga 45347331  T
Q  200 agtcaatttcaaca 213  Q
    || |||||| ||||    
T  45347330 agccaattttaaca 45347317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 28 - 213
Target Start/End: Complemental strand, 8393167 - 8392982
Alignment:
Q  28 agacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaac-tagctct 126  Q
    |||| |||||||||||  |||||||||| |||||||||||| ||||||||||||||| || | |||||||||| |||||    ||||||| | ||||||     
T  8393167 agaccagtccttatcacggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctca 8393068  T
Q  127 ctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    | ||  |  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  8393067 cggcatcc-gaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 8392982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 33 - 151
Target Start/End: Original strand, 29761078 - 29761196
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||      
T  29761078 agtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcac 29761177  T
Q  133 cttgaaatcgtgtcacgat 151  Q
    || ||||||||||||||||    
T  29761178 ctcgaaatcgtgtcacgat 29761196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 45357010 - 45356891
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    ||||||||||||||||||  || |||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45357010 tgtcacgatctgcaacggttcccaggttgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 45356911  T
Q  101 aatttggcgtcctgcaaact 120  Q
     |||| || ||| |||||||    
T  45356910 gattttgcatccagcaaact 45356891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 49 - 201
Target Start/End: Original strand, 13992714 - 13992866
Alignment:
Q  49 acttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcac 148  Q
    ||||||| |||||||||   ||||||||||||||||||||| |||||| ||| |||||||  ||||||||| ||||| |  |  |  |||||||||||||    
T  13992714 acttaacgagcaagtttgaaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccctgcaaaccagctcacgacatcacgaaatcgtgtcac 13992813  T
Q  149 gataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    ||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  13992814 gatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 13992866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 33 - 201
Target Start/End: Original strand, 31495721 - 31495889
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  || ||||||| |||||||||   ||||||||||||||||||||  |||||| ||| |||||||  ||||||||| ||||| | ||      
T  31495721 agtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcat 31495820  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    |  |||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  31495821 cacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 31495889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 33 - 201
Target Start/End: Complemental strand, 7122447 - 7122279
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaac-tagctctctgcc 131  Q
    |||||||||||  |||||||||| |||||||||||| |||||||||||||||||||  |||||||||| |||||    ||||||| | |||||| | ||     
T  7122447 agtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctcacggca 7122348  T
Q  132 acttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
     |  |||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  7122347 tcc-gaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccacaccacaaatttgaag 7122279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 33 - 201
Target Start/End: Complemental strand, 7124669 - 7124501
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaac-tagctctctgcc 131  Q
    |||||||||||  |||||||||| |||||||||||| |||||||||||||||||||  |||||||||| |||||    ||||||| | |||||| | ||     
T  7124669 agtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctcacggca 7124570  T
Q  132 acttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
     |  |||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  7124569 tcc-gaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccacaccacaaatttgaag 7124501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 8395371 - 8395191
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaac-tagctctctgcc 131  Q
    |||||||||||  |||||||||| |||||||||||| || |||||||||||| || | ||||||| || |||||    ||||||| | |||||| | ||     
T  8395371 agtccttatcacggatacttaacgagcaagtttctggattgtgtcacgattttcccaaatcgtgctacgatttgcacccctgcaaccctagctcacggca 8395272  T
Q  132 acttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
     |  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  8395271 tcc-gaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 8395191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 33 - 201
Target Start/End: Complemental strand, 28468158 - 28467990
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  || ||||||| |||||||||   |||||||||||||||| ||||||||||| ||| |||||||  ||||||||| ||||| | ||      
T  28468158 agtccttatcatagaaacttaacgagcaagtttgaaaatcgtgtcacgattttccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcat 28468059  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    |   ||||||||| ||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  28468058 cacaaaatcgtgttacgatgccaaattcgtgtcacgatttctctgttcttccataccacaaatttgaag 28467990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 138 - 213
Target Start/End: Original strand, 18860446 - 18860521
Alignment:
Q  138 aatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18860446 aatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaaca 18860521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 34 - 213
Target Start/End: Complemental strand, 5135829 - 5135649
Alignment:
Q  34 gtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgattt-cccaagatcgtgccacaatttggcgtcctgcaaac-tagctctctgcc 131  Q
    ||||||||||  |||||||||| |||||||||||  ||||||||||||||| ||||| |||||| ||| |||||    ||||||| | || ||| | ||     
T  5135829 gtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgatttgcacccctgcaaccctaactcacggca 5135730  T
Q  132 acttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
     |  ||||||| |||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||| ||||||    
T  5135729 tcc-gaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaatctcaaca 5135649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 34 - 213
Target Start/End: Complemental strand, 5138055 - 5137875
Alignment:
Q  34 gtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgattt-cccaagatcgtgccacaatttggcgtcctgcaaac-tagctctctgcc 131  Q
    ||||||||||  |||||||||| |||||||||||  ||||||||||||||| ||||| |||||| ||| |||||    ||||||| | || ||| | ||     
T  5138055 gtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgatttgcacccctgcaaccctaactcacggca 5137956  T
Q  132 acttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
     |  ||||||| |||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||| ||||||    
T  5137955 tcc-gaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaatctcaaca 5137875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 31985204 - 31985140
Alignment:
Q  137 aaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  31985204 aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagatcacaaatttgaag 31985140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 8689097 - 8689042
Alignment:
Q  153 ccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaattt 208  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  8689097 ccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattt 8689042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 154 - 208
Target Start/End: Original strand, 5143807 - 5143861
Alignment:
Q  154 caaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaattt 208  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  5143807 caaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattt 5143861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 29761182 - 29761227
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  29761182 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 29761227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 137 - 208
Target Start/End: Original strand, 5148225 - 5148296
Alignment:
Q  137 aaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaattt 208  Q
    ||||||||||||| |   |||||||||||||||||||||| |||||||| ||||||||||||||| ||||||    
T  5148225 aaatcgtgtcacggtgataaaatcgtgtcacgatttctctattcttccaaaccacaaatttgaagccaattt 5148296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 16628403 - 16628353
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaat 206  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  16628403 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 16628353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 38151968 - 38151918
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaat 206  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  38151968 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 38151918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 157 - 206
Target Start/End: Original strand, 3778116 - 3778165
Alignment:
Q  157 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaat 206  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  3778116 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 3778165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 5268750 - 5268698
Alignment:
Q  155 aaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatt 207  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||| |||||    
T  5268750 aaaatcctgtcacgatttctctgttcttccaaaccacaaatttgaagccaatt 5268698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 156 - 208
Target Start/End: Complemental strand, 6742946 - 6742894
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaattt 208  Q
    |||||||||||||||||||||||||||||| |||| |||||||||| ||||||    
T  6742946 aaatcgtgtcacgatttctctgttcttccaaaccataaatttgaagccaattt 6742894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 10047932 - 10047982
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaat 206  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||| ||||    
T  10047932 aaatcgtgtcacgatttatctgttcttccaaaccacaaatttgaagccaat 10047982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 16622824 - 16622774
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaat 206  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||| ||||    
T  16622824 aaatcgtgtcacgatttctctgttcttccaaaccacaaattttaagccaat 16622774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 54867745 - 54867796
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatt 207  Q
    |||||||||||||| |||||| |||||||| ||||||||||||||| |||||    
T  54867745 aaatcgtgtcacgacttctctattcttccaaaccacaaatttgaagccaatt 54867796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 36314761 - 36314716
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    ||||||||||||||||||||| |||||| | |||||||||||||||    
T  36314761 aaatcgtgtcacgatttctctattcttcgaaaccacaaatttgaag 36314716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 36328970 - 36328925
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    ||||||||||||||||||||| |||||| | |||||||||||||||    
T  36328970 aaatcgtgtcacgatttctctattcttcgaaaccacaaatttgaag 36328925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 9194164 - 9194215
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttcc-agaccacaaatttgaagtcaat 206  Q
    |||||||||||| |||||||||||||||| | ||||||||||||||| ||||    
T  9194164 aaatcgtgtcacaatttctctgttcttccaaaaccacaaatttgaagccaat 9194215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 5396221 - 5396177
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    |||||||| |||||||||||||||||| || |||||||||||||||    
T  5396221 aaatcgtg-cacgatttctctgttctttcaaaccacaaatttgaag 5396177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 177; Significance: 3e-95; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 39811689 - 39811477
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39811689 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 39811590  T
Q  101 aatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 200  Q
     ||||||||||||||||||| |||  | | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39811589 gatttggcgtcctgcaaacttgcttacggtcacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 39811490  T
Q  201 gtcaatttcaaca 213  Q
    | |||| ||||||    
T  39811489 gccaatatcaaca 39811477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 11098567 - 11098387
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||      
T  11098567 agtccttatcagtgatacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcac 11098468  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  11098467 cttgaaatcgtgtcactatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 11098387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 14291945 - 14292125
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||      
T  14291945 agtccttatcagtggtacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcac 14292044  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    || || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  14292045 ctcgagatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 14292125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 9296042 - 9295862
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  |||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| | ||      
T  9296042 agtccttatcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcatcctgcaaactagctcacggcac 9295943  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  9295942 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 9295862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 33 - 202
Target Start/End: Original strand, 4484742 - 4484911
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  || ||||||| |||||||||   ||||||||||||||| |  ||||||||| ||| |||||||  ||||||||||||||| | ||      
T  4484742 agtccttatcatagaaacttaacgagcaagtttgcaaatcgtgtcacgattccttaagatcgtgtcacgatttggcaccctgcaaactagctcacggcat 4484841  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagt 202  Q
    | ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4484842 catgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagt 4484911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 35 - 201
Target Start/End: Original strand, 25410087 - 25410253
Alignment:
Q  35 tccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgccact 134  Q
    |||||||||  |||||||||| |||||||||   |||||||||||||||||||||||||||| ||| |||||||  ||||||||| | ||| | ||  |     
T  25410087 tccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccatctcacggcatca 25410186  T
Q  135 tgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
      ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  25410187 caaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 25410253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 49 - 201
Target Start/End: Original strand, 3492212 - 3492364
Alignment:
Q  49 acttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcac 148  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||| ||| |||||||  ||||||||| ||||| | ||  |   ||||||||||||    
T  3492212 acttaacgagcaagtttcagaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 3492311  T
Q  149 gataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    ||| ||||| ||||||||| |||||||||||||| ||||||||||||||||||    
T  3492312 gatgccaaattcgtgtcacaatttctctgttctttcagaccacaaatttgaag 3492364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 12647787 - 12647967
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaac-tagctctctgcc 131  Q
    |||||||||||  |||||||||| ||||||||| || |||||||||||||||||||  |||||||||| |||||    ||||||| | |||||| | ||     
T  12647787 agtccttatcaaggatacttaacgagcaagtttatggatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctcacggca 12647886  T
Q  132 acttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
     |  |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  12647887 tcc-gaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 12647967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 19344797 - 19345004
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    ||||| |||||||||||| ||| |||  ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  19344797 tgtcatgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccat 19344896  T
Q  101 aatttggcgtcctgcaaac-tagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 199  Q
     |||| || ||| |||||| | |||| | | ||  |   ||||| |||||||  | |||||| | ||||||| ||||||||||||| |||||||||||||    
T  19344897 gattttgcttccagcaaacttggctcac-ggcatctccgatcgtatcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttga 19344995  T
Q  200 agtcaattt 208  Q
    || ||||||    
T  19344996 agccaattt 19345004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 49 - 201
Target Start/End: Complemental strand, 30833086 - 30832934
Alignment:
Q  49 acttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcac 148  Q
    ||||||| |||||||||   |||||||||||||||||||||||||||| ||| |||||||  ||||||||| ||||| | ||  |  |||||||||||||    
T  30833086 acttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcac 30832987  T
Q  149 gataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    |||  |||| || ||||||||||||||||||||||||||||||||||||||||    
T  30832986 gatgtcaaattcatgtcacgatttctctgttcttccagaccacaaatttgaag 30832934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 19349655 - 19349854
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||||| ||  |||  ||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19349655 tgtcacgatctgcaacggtcctcaggttgaccagtccttatcagagatacttaaccaacaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 19349754  T
Q  101 aatttggcgtcctgcaaac-tagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 199  Q
     |||| || ||| |||||| | |||| | | ||  |   |||||||||||||  | |||| | | ||||||| ||||||||||||| |||||||||||||    
T  19349755 gattttgcttccagcaaacttggctcac-ggcatctccgatcgtgtcacgattgccaaattgcgacacgattcctctgttcttccaaaccacaaatttga 19349853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 33 - 201
Target Start/End: Complemental strand, 32289329 - 32289161
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  || ||||||| |||||||||   ||||||||||||||| | |||||||||| ||  |||||||  ||||||||| ||||| | ||      
T  32289329 agtccttatcatggaaacttaacgagcaagttttcaaatcgtgtcacgattcctcaagatcgtgtcaagatttggcaccctgcaaaccagctcacggcat 32289230  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    |   ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  32289229 cacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 32289161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 44310555 - 44310471
Alignment:
Q  129 gccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  44310555 gccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 44310471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 137 - 213
Target Start/End: Original strand, 32247276 - 32247352
Alignment:
Q  137 aaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  32247276 aaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 32247352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 35 - 201
Target Start/End: Complemental strand, 6266453 - 6266287
Alignment:
Q  35 tccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgccact 134  Q
    |||||||||  || ||||||| || ||||||   ||||||||||||||||||||  |||||| ||| |||||||  ||||||||| ||||| | ||  |     
T  6266453 tccttatcatggaaacttaacgagtaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatca 6266354  T
Q  135 tgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
     ||||| ||||||||||  |||| |||||||||||||||  ||||||||||||||||||||||||||    
T  6266353 cgaaattgtgtcacgatgtcaaattcgtgtcacgatttccatgttcttccagaccacaaatttgaag 6266287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 49 - 201
Target Start/End: Original strand, 40739292 - 40739444
Alignment:
Q  49 acttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcac 148  Q
    ||||||| |||||||||   ||| ||||||| ||| | |||||||||| ||| |||||||  ||||||||| ||||| | ||      ||||||||||||    
T  40739292 acttaacgagcaagtttgaaaattgtgtcacaattccacaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcataacaaaatcgtgtcac 40739391  T
Q  149 gataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    ||| ||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  40739392 gatgccaaattcgtgtcacgatttgtctgttcttccagaccacaaatttgaag 40739444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 32247161 - 32247244
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgattt 84  Q
    |||||||||||||||||| ||| |||  ||| |||| |||||||||||||||||| ||||||||||||||||||| ||||||||    
T  32247161 tgtcacgatctgcaacggtccccaggttgaccagtctttatcagtgatacttaacgagcaagtttctgaatcgtgccacgattt 32247244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 8389681 - 8389631
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaat 206  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  8389681 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 8389631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 154 - 208
Target Start/End: Complemental strand, 36757477 - 36757423
Alignment:
Q  154 caaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaattt 208  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||    
T  36757477 caaaatcgtgtcacgatttttctgttcttccaaaccacaaatttgaagccaattt 36757423  T

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Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 154 - 213
Target Start/End: Complemental strand, 28258729 - 28258669
Alignment:
Q  154 caaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtc-aatttcaaca 213  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||| | ||||||||||    
T  28258729 caaaatcgtgtcacgatttctctgtttttccaaaccacaaatttgaagccaaatttcaaca 28258669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 33528155 - 33528104
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatt 207  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||| |||||    
T  33528155 aaattgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatt 33528104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 10706783 - 10706733
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaat 206  Q
    |||||||||||||||||||||||||||||| || |||||||||||| ||||    
T  10706783 aaatcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaat 10706733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 21630511 - 21630561
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaat 206  Q
    |||||||||||||||||||||||||||||| || |||||||||||| ||||    
T  21630511 aaatcgtgtcacgatttctctgttcttccaaactacaaatttgaagccaat 21630561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 39483443 - 39483493
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaat 206  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||| ||||    
T  39483443 aaatcgtgtcacaatttctctgttcttccaaaccacaaatttgaagccaat 39483493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 20522794 - 20522839
Alignment:
Q  162 tgtcacgatttctctgttcttccagaccacaaatttgaagtcaatt 207  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||    
T  20522794 tgtcacgatttctctgttcttccaaaccacaaatttgaagccaatt 20522839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 23078002 - 23077952
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaat 206  Q
    |||||||||||||||||||||||||||||| |||| || ||||||| ||||    
T  23078002 aaatcgtgtcacgatttctctgttcttccaaaccaaaattttgaagccaat 23077952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 125
Target Start/End: Complemental strand, 28258815 - 28258739
Alignment:
Q  49 acttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctc 125  Q
    |||||||||||||||||   ||||||||||||||||| ||| || ||||||| ||||| |  ||||||||| |||||    
T  28258815 acttaaccagcaagtttgaaaatcgtgtcacgatttcacaaaattgtgccacgatttgacaccctgcaaaccagctc 28258739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 169; Significance: 2e-90; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 12406645 - 12406857
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    ||||||||| |||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  12406645 tgtcacgatttgcaacggacccaaggtagacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 12406744  T
Q  101 aatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 200  Q
     |||||||||| ||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12406745 gatttggcgtcttgcaaactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 12406844  T
Q  201 gtcaatttcaaca 213  Q
    | |||| ||||||    
T  12406845 gccaatatcaaca 12406857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 31109283 - 31109070
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31109283 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagttatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 31109184  T
Q  101 aatttggcgtcctgcaaac-tagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 199  Q
     |||||||||||||||||| |||||  | | |||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  31109183 gatttggcgtcctgcaaacttagcttacaggcacttgaaatcgtgccacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttga 31109084  T
Q  200 agtcaatttcaaca 213  Q
    || |||||||||||    
T  31109083 agccaatttcaaca 31109070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 4873509 - 4873725
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    ||||||||| |||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  4873509 tgtcacgatttgcaacggacccaaggaagacaagtccttatcagtgatacttaacgagcaagtttctgaattgtgtcacgatttcccaagatcgtgccac 4873608  T
Q  101 aatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 200  Q
     |||||||||||||||||||| ||  | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4873609 gatttggcgtcctgcaaactatcttacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 4873708  T
Q  201 gtcaatttcaacactat 217  Q
    | |||| ||||||||||    
T  4873709 gccaatatcaacactat 4873725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 24024031 - 24023831
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||||| ||| |||  ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  24024031 tgtcacgatctgcaacggtccccaggttgaccagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 24023932  T
Q  101 aatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 200  Q
     ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  24023931 gatttggcgtcctgcaaactagctctctgccacttgaaatcgtgccacgatgccacaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 24023832  T
Q  201 g 201  Q
    |    
T  24023831 g 24023831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 21 - 213
Target Start/End: Original strand, 21640230 - 21640423
Alignment:
Q  21 ccaaggca-gacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaac 119  Q
    |||||||| ||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  21640230 ccaaggcatgaccagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaac 21640329  T
Q  120 tagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    |||||| | ||  || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  21640330 tagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 21640423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 34 - 214
Target Start/End: Complemental strand, 20357207 - 20357027
Alignment:
Q  34 gtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgccac 133  Q
    ||||||||||  |||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||  |    
T  20357207 gtccttatcaaggatacttaacgagcaagtttctgaatcatgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacc 20357108  T
Q  134 ttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaacac 214  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  20357107 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacac 20357027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 33 - 214
Target Start/End: Original strand, 2058425 - 2058605
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | | ||    
T  2058425 agtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcac-ggca 2058523  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaacac 214  Q
    | | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  2058524 cctcaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacac 2058605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 12397293 - 12397492
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    ||||||||| |||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |      
T  12397293 tgtcacgatttgcaacggacccaaggtagacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcatggc-- 12397390  T
Q  101 aatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 200  Q
               |||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  12397391 -----------ctgcaaactagctcacggccacttgaaatcgtgtcacgataccaaaatcgtgtcgcgatttctctgttcttccagaccacaaatttgaa 12397479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 33 - 201
Target Start/End: Complemental strand, 24789607 - 24789439
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  |||||||||| ||||||||||  |||||||||||||||||||||||||||||||| |||||||  ||||||||||||||| | ||      
T  24789607 agtccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgccacgatttggcaccctgcaaactagctcacggcac 24789508  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    |  |||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  24789507 cacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 24789439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 24265889 - 24265677
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||||| ||| | |  ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24265889 tgtcacgatctgcaacggtccccaagttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 24265790  T
Q  101 aatttggcgtcctgcaaac-tagctctctgcc-acttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttg 198  Q
     |||| || ||| |||||| |||||| |||||  | ||  ||||||||||||   |||||||||| ||||||| ||||||||| ||| ||||| ||||||    
T  24265789 gattttgcttccagcaaacttagctcactgcctccctg--atcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttg 24265692  T
Q  199 aagtcaatttcaaca 213  Q
    ||||||||| |||||    
T  24265691 aagtcaattccaaca 24265677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 16880448 - 16880660
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||||| ||| |||  ||| |||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||| |||    
T  16880448 tgtcacgatctgcaacggtccccaggttgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacaatttcccaagatcgtgacac 16880547  T
Q  101 aatttggcgtcctgcaaacta-gctctctgcc-acttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttg 198  Q
     |||| || ||| |||||||| |||| |||||  | ||  |||||||||||||  |||||||||| ||||||| ||||| ||||||| ||||| ||||||    
T  16880548 gattttgcttccagcaaactaggctcactgcctccctg--atcgtgtcacgatggcaaaatcgtgacacgattcctctgctcttccaaaccactaatttg 16880645  T
Q  199 aagtcaatttcaaca 213  Q
    ||||||||| |||||    
T  16880646 aagtcaattccaaca 16880660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 16885303 - 16885515
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||||| ||| |||  ||| |||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||| |||    
T  16885303 tgtcacgatctgcaacggtccccaggttgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacaatttcccaagatcgtgacac 16885402  T
Q  101 aatttggcgtcctgcaaacta-gctctctgcc-acttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttg 198  Q
     |||| || ||| |||||||| |||| |||||  | ||  |||||||||||||  |||||||||| ||||||| ||||| ||||||| ||||| ||||||    
T  16885403 gattttgcttccagcaaactaggctcactgcctccctg--atcgtgtcacgatggcaaaatcgtgacacgattcctctgctcttccaaaccactaatttg 16885500  T
Q  199 aagtcaatttcaaca 213  Q
    ||||||||| |||||    
T  16885501 aagtcaattccaaca 16885515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 8 - 201
Target Start/End: Complemental strand, 21811944 - 21811751
Alignment:
Q  8 atctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttgg 107  Q
    ||||||||||| | | |||  ||| |||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||| |    
T  21811944 atctgcaacggtctccaggttgaccagtccttatcagagatacttaactagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttg 21811845  T
Q  108 cgtcctgcaaac-tagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    |  ||||||||| | |||| | | ||  | | |||||||||||||  |||||||||| ||||||| |||||||||||||||||||||||||||||    
T  21811844 caccctgcaaacattgctcac-ggcatctcagatcgtgtcacgatggcaaaatcgtgacacgattcctctgttcttccagaccacaaatttgaag 21811751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 33 - 201
Target Start/End: Original strand, 18414094 - 18414262
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  || ||||||| |||||||||  ||||||||| ||||||||||||||||||| ||| |||||||| ||||||||| ||||| | ||      
T  18414094 agtccttatcatggaaacttaacaagcaagtttgagaatcgtgttacgatttcccaagatcgtgtcacgatttggcgccctgcaaaccagctcacggcac 18414193  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    |   |||||||| |||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  18414194 cacaaaatcgtgccacgatgccaaattcgtgtcacgatttctctgttcttccagaccataaatttgaag 18414262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 33 - 201
Target Start/End: Original strand, 43504540 - 43504708
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  || ||||||| |||||||||   |||||||||||||||||||| ||||||| ||| |||||||  ||||||||| ||||| | ||      
T  43504540 agtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacgatcgtgtcacgatttggcaccctgcaaaccagctcacggcat 43504639  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    |  |||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  43504640 cacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 43504708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 6592741 - 6592921
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaac-tagctctctgcc 131  Q
    |||||||||||  |||||||||| |||||||||||| ||||||||||||||| || | |||||||||| |||||    ||||||| | |||||| | ||     
T  6592741 agtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctcacggca 6592840  T
Q  132 acttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
     |  |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  6592841 tcc-gaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 6592921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 32060708 - 32060888
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaac-tagctctctgcc 131  Q
    |||||||||||  |||||||||| |||||||||||  ||||||||||||||| || | |||||||||| |||||    ||||||| | |||||| | ||     
T  32060708 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctcacggca 32060807  T
Q  132 acttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
     |  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  32060808 tcc-gaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 32060888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 20343680 - 20343500
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  |||||||||| ||||||||||   |||||||||||||||||||  |||||| ||| |||| || ||| |||| ||||||| | ||      
T  20343680 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgcatccggcaacctagctcacggcac 20343581  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    |  |||||||||||||||| ||| ||||| ||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  20343580 cccgaaatcgtgtcacgatgccacaatcgcgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 20343500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 37 - 201
Target Start/End: Original strand, 21646466 - 21646630
Alignment:
Q  37 cttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgccacttg 136  Q
    |||||||  |||||||||| |||||||||   |||||||||||||||| ||||||||||| ||| |||||||  ||||||||| ||||| | ||  |  |    
T  21646466 cttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgattttccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacg 21646565  T
Q  137 aaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    ||||||||||||||| ||||| | ||||||||||||||||||||||||| |||||||||||||||    
T  21646566 aaatcgtgtcacgatgccaaatttgtgtcacgatttctctgttcttccaaaccacaaatttgaag 21646630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 33 - 201
Target Start/End: Complemental strand, 39731114 - 39730946
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  || ||||||| |||||||||   ||||||||||||||| | |||||||||| ||| |||||||  ||||||||| ||||| | ||      
T  39731114 agtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcat 39731015  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    |   ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  39731014 cacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 39730946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 6594957 - 6595137
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaac-tagctctctgcc 131  Q
    |||||||||||  |||||||||| |||||||||||| ||||||||||||||| || | |||||||||| |||||    ||||||| | |||||| | ||     
T  6594957 agtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctcacggca 6595056  T
Q  132 acttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
     |  |||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||| |||| ||||||    
T  6595057 tcc-gaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgtttttccagaccacaaatttgaagacaatctcaaca 6595137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 33 - 201
Target Start/End: Original strand, 18409218 - 18409386
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  || ||||||| |||||||||  |||||||||||||||||| |||||||||| ||  |||||||  ||||||||| ||||| | ||      
T  18409218 agtccttatcatggaaacttaacaagcaagtttgagaatcgtgtcacgatttctcaagatcgtgtcatgatttggcaccctgcaaaccagctcacggcac 18409317  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    |   ||||||||||||||| ||||| |||||| |||||||||||||||||||||| |||||||||||||    
T  18409318 cacaaaatcgtgtcacgatgccaaattcgtgttacgatttctctgttcttccagaacacaaatttgaag 18409386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 49 - 201
Target Start/End: Complemental strand, 48408563 - 48408411
Alignment:
Q  49 acttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcac 148  Q
    ||||||| |||||||||   ||||||||||||||||| |||||||||| ||| |||||||  ||||||||| ||||| | ||  |   ||||||||||||    
T  48408563 acttaacgagcaagtttgcaaatcgtgtcacgatttctcaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 48408464  T
Q  149 gataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    ||| ||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  48408463 gatgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaag 48408411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 136 - 213
Target Start/End: Original strand, 1562510 - 1562587
Alignment:
Q  136 gaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  1562510 gaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 1562587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 24261001 - 24260821
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaac-tagctctctgcc 131  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| || | | |   || | |||| |||||    
T  24261001 agtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgctttcagattacttggctcactgcc 24260902  T
Q  132 -acttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
      | ||  |||||||||||||  | |||||||| ||||||| ||||||||| ||| ||||||||||||||| ||||| |||||    
T  24260901 tccctg--atcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattccaaca 24260821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 49 - 217
Target Start/End: Original strand, 2479795 - 2479964
Alignment:
Q  49 acttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgccacttgaaa-tcgtgtca 147  Q
    ||||||||| |||||||   |||||||| |||||||| ||| |||||| ||| ||||| |  ||||||||| ||||| | || | | |||| ||||||||    
T  2479795 acttaaccaacaagtttgaaaatcgtgtaacgatttcacaaaatcgtgacacgatttgacaccctgcaaaccagctcacggc-attagaaaatcgtgtca 2479893  T
Q  148 cgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtc-aatttcaacactat 217  Q
    |||| ||||||||||||||| |||||||||||||| || ||||||||||||||| | ||||||||||||||    
T  2479894 cgatgccaaaatcgtgtcacaatttctctgttcttacaaaccacaaatttgaagccaaatttcaacactat 2479964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 33 - 170
Target Start/End: Complemental strand, 1533084 - 1532947
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  |||||||||| || |||||||  |||||||||||||||||||||||||||| ||| |||||||  |||||||||||||||   ||      
T  1533084 agtccttatcaaggatacttaacgagtaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaactagctcatggcac 1532985  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgat 170  Q
    ||  ||||| ||||||||| ||||| ||||||||||||    
T  1532984 ctcaaaatcatgtcacgatgccaaattcgtgtcacgat 1532947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 18392600 - 18392780
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaac-tagctctctgcc 131  Q
    |||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | |||||| ||| | || ||  ||||||| | |||||| | ||     
T  18392600 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctcacggc- 18392698  T
Q  132 acttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    || |  |||||||||||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  18392699 acctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 18392780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 49 - 213
Target Start/End: Original strand, 47264102 - 47264267
Alignment:
Q  49 acttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgccacttgaaa-tcgtgtca 147  Q
    |||||||||||||||||   ||||||||||||||||| ||  || ||||||| ||||| |  ||| ||||| ||||| | | || |  ||| ||||||||    
T  47264102 acttaaccagcaagtttgaaaatcgtgtcacgatttcacacaattgtgccacgatttgacaccctacaaaccagctcac-gacattacaaaatcgtgtca 47264200  T
Q  148 cgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtc-aatttcaaca 213  Q
    |||| |||||||||||||||||||||||| |||||||| ||||||||||||||| | ||||||||||    
T  47264201 cgatgccaaaatcgtgtcacgatttctctattcttccaaaccacaaatttgaagccaaatttcaaca 47264267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 140 - 201
Target Start/End: Complemental strand, 1532958 - 1532897
Alignment:
Q  140 tcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  1532958 tcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 1532897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 49 - 201
Target Start/End: Original strand, 25767381 - 25767527
Alignment:
Q  49 acttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcac 148  Q
    ||||||| |||||||||   ||||||||||||||||||||| |||||| ||| |||||||  ||||||||| ||||| | ||  |  |||||||||||||    
T  25767381 acttaacgagcaagtttgaaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcac 25767480  T
Q  149 gataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    ||| ||||| | ||||||||||||||      |||||||||||||||||||||    
T  25767481 gatgccaaatttgtgtcacgatttct------ttccagaccacaaatttgaag 25767527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 137 - 213
Target Start/End: Complemental strand, 44847696 - 44847619
Alignment:
Q  137 aaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtc-aatttcaaca 213  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||  | ||||||||||||||| | ||||||||||    
T  44847696 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttttaaaccacaaatttgaagccaaatttcaaca 44847619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 137 - 208
Target Start/End: Original strand, 21983790 - 21983861
Alignment:
Q  137 aaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaattt 208  Q
    |||||||||||||||    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  21983790 aaatcgtgtcacgatgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattt 21983861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 213
Target Start/End: Original strand, 21989454 - 21989531
Alignment:
Q  137 aaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaa-tttcaaca 213  Q
    |||||||||||||||    ||||| |||||||||||||||||||||||| ||||||||||||||| ||| ||||||||    
T  21989454 aaatcgtgtcacgatgatgaaatcttgtcacgatttctctgttcttccaaaccacaaatttgaagccaactttcaaca 21989531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 79955 - 80005
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaat 206  Q
    |||||||||||||||||||||||||||||| | ||||||||||||| ||||    
T  79955 aaatcgtgtcacgatttctctgttcttccaaatcacaaatttgaagccaat 80005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 49092237 - 49092282
Alignment:
Q  155 aaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 200  Q
    ||||||||||||| ||||||||||||||||| || |||||||||||    
T  49092237 aaaatcgtgtcacaatttctctgttcttccaaactacaaatttgaa 49092282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 105
Target Start/End: Original strand, 1562407 - 1562479
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaattt 105  Q
    |||||||||||  |||||||||| ||||||||||   ||||||||||||||| |||| |||||| ||| ||||    
T  1562407 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttaccaaaatcgtgacacgattt 1562479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 18390506 - 18390562
Alignment:
Q  157 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    ||||||| ||||||||| ||||||||| | ||||||||||||||| |||| ||||||    
T  18390506 aatcgtggcacgatttccctgttcttctaaaccacaaatttgaagacaatctcaaca 18390562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 46515860 - 46515808
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttcc-agaccacaaatttgaagtcaatt 207  Q
    ||||||||||||||||||||||||||||| | |||| |||||||||| |||||    
T  46515860 aaatcgtgtcacgatttctctgttcttccaaaaccataaatttgaagccaatt 46515808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 171
Target Start/End: Original strand, 4509335 - 4509369
Alignment:
Q  137 aaatcgtgtcacgataccaaaatcgtgtcacgatt 171  Q
    ||||||||||||||| |||||||||||||||||||    
T  4509335 aaatcgtgtcacgatcccaaaatcgtgtcacgatt 4509369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 171
Target Start/End: Original strand, 4511177 - 4511211
Alignment:
Q  137 aaatcgtgtcacgataccaaaatcgtgtcacgatt 171  Q
    ||||||||||||||| |||||||||||||||||||    
T  4511177 aaatcgtgtcacgatcccaaaatcgtgtcacgatt 4511211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 171
Target Start/End: Complemental strand, 6431501 - 6431467
Alignment:
Q  137 aaatcgtgtcacgataccaaaatcgtgtcacgatt 171  Q
    ||||||||||||||| |||||||||||||||||||    
T  6431501 aaatcgtgtcacgatcccaaaatcgtgtcacgatt 6431467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 165; Significance: 4e-88; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 14742138 - 14741926
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||||| |||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  14742138 tgtcacgatctgcaacggacccaaggttgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccac 14742039  T
Q  101 aatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 200  Q
     |||||||||||||||||||||||| |  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14742038 gatttggcgtcctgcaaactagctcacgaccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 14741939  T
Q  201 gtcaatttcaaca 213  Q
    | |||| ||||||    
T  14741938 gccaatatcaaca 14741926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 22010401 - 22010189
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    ||||||||| |||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22010401 tgtcacgatttgcaacggacccaaggtagacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 22010302  T
Q  101 aatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 200  Q
     |||||||||||||||||||| ||  | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22010301 gatttggcgtcctgcaaactaacttacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 22010202  T
Q  201 gtcaatttcaaca 213  Q
    | |||| ||||||    
T  22010201 gccaatatcaaca 22010189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 11857355 - 11857567
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    ||||||||| |||||||| |||||||  |||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  11857355 tgtcacgatttgcaacggacccaaggttgacaagtccttatcagtgttacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccac 11857454  T
Q  101 aatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 200  Q
     |||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11857455 gatttggcgtcctgcaaactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 11857554  T
Q  201 gtcaatttcaaca 213  Q
    | |||| ||||||    
T  11857555 gccaatatcaaca 11857567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 46 - 213
Target Start/End: Complemental strand, 30125185 - 30125018
Alignment:
Q  46 gatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgccacttgaaatcgtgt 145  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| | ||  || ||||||||||    
T  30125185 gatacttaacgagcaagtttctgaatcgtgtcacgatttcccaaaatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgt 30125086  T
Q  146 cacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  30125085 cacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 30125018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 14737278 - 14737128
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||||| |||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  14737278 tgtcacgatctgcaacggacccaaggttgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccac 14737179  T
Q  101 aatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcacgat 151  Q
     |||||||||||||||||||||||| | |||||||||||||||||||||||    
T  14737178 gatttggcgtcctgcaaactagctcacggccacttgaaatcgtgtcacgat 14737128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 6438871 - 6439083
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    ||||||||||||||||||  || |||  ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6438871 tgtcacgatctgcaacggttcccaggttgaccagtccttatcagtgatacttaactagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 6438970  T
Q  101 aatttggcgtcctgcaaac-tagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 199  Q
     |||  || ||| |||||| | |||| | | ||| |  |||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||    
T  6438971 gattatgcatccagcaaacttggctcac-ggcacctccaatcgtgtcacgattccaaaatcgtgtcacgatttctatgttcttccagaccataaatttga 6439069  T
Q  200 agtcaatttcaaca 213  Q
    || |||||||||||    
T  6439070 agccaatttcaaca 6439083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 16839118 - 16839325
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||||| |||||||  ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16839118 tgtcacgatctgcaacggtcccaaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 16839217  T
Q  101 aatttggcgtcctgcaaac-tagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 199  Q
     |||| || ||| |||||| | |||| | | ||  |   |||||||||||||  | |||||| | ||||||| ||||||||||||| |||||||||||||    
T  16839218 gattttgcttccagcaaacttggctcac-ggcatctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttga 16839316  T
Q  200 agtcaattt 208  Q
    || ||||||    
T  16839317 agccaattt 16839325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 16578921 - 16579101
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | |||||||||| |||| ||  ||||||| ||||||| | ||      
T  16578921 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgcaacctagctcacggcac 16579020  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    |  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  16579021 cccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 16579101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 16616459 - 16616279
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | |||||||||| |||| ||  ||||||| ||||||| | ||      
T  16616459 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgcaacctagctcacggcac 16616360  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    |  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  16616359 cccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 16616279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 33330145 - 33329938
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||||| ||| |||  ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33330145 tgtcacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 33330046  T
Q  101 aatttggcgtcctgcaaac-tagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 199  Q
     |||| || ||| |||||| | |||| | | ||  |   |||||||||||||  | |||||| | ||||||| ||||||||||||| |||||||||||||    
T  33330045 gattttgcttccagcaaacttggctcac-ggcatctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttga 33329947  T
Q  200 agtcaattt 208  Q
    || ||||||    
T  33329946 agccaattt 33329938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 6005794 - 6006001
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||||| ||| |||  ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6005794 tgtcacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 6005893  T
Q  101 aatttggcgtcctgcaaac-tagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 199  Q
     |||| || ||| |||||| | ||||  || ||  |   |||||||||||||  | |||||| | ||||||| ||||||| ||||| |||||||||||||    
T  6005894 gattttgcttccagcaaacttggctc-atggcatctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgtttttccaaaccacaaatttga 6005992  T
Q  200 agtcaattt 208  Q
    || ||||||    
T  6005993 agccaattt 6006001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 16554634 - 16554454
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | ||||||||||||||| ||  |||| || ||||||| | ||      
T  16554634 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacaattttgcaccctgtaacctagctcacggcac 16554535  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    |  ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  16554534 cccgaaatcgtgtcacgataccaaaatcatgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 16554454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 16631190 - 16631010
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | ||||||||||||||| ||  |||| || ||||||| | ||      
T  16631190 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacaattttgcaccctgtaacctagctcacggcac 16631091  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    |  ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  16631090 cccgaaatcgtgtcacgataccaaaatcatgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 16631010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 33335642 - 33335435
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||||| ||| |||  ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33335642 tgtcacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 33335543  T
Q  101 aatttggcgtcctgcaaac-tagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 199  Q
     |||| || ||| |||||| | |||| | | ||  |   |||||||||||||  | |||||| |  |||||| ||||||||||||| |||||||||||||    
T  33335542 gattttgcttccagcaaacttggctcac-ggcatctccgatcgtgtcacgattgccaaatcgcgaaacgattcctctgttcttccaaaccacaaatttga 33335444  T
Q  200 agtcaattt 208  Q
    || ||||||    
T  33335443 agccaattt 33335435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 33 - 201
Target Start/End: Complemental strand, 5674410 - 5674242
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  |||||||||| ||||||||||  |||||||||||||||||||||||| ||| ||| |||||||  ||||||||| ||||| | ||      
T  5674410 agtccttatcacggatacttaacgagcaagtttcaaaatcgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacggcat 5674311  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    |   ||||| ||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||    
T  5674310 cacaaaatcatgtcacgatgccaaattcatgtcacgatttctctgttcttccagaccacaaatttgaag 5674242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 33 - 151
Target Start/End: Original strand, 5266492 - 5266610
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  |||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||      
T  5266492 agtccttatcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcac 5266591  T
Q  133 cttgaaatcgtgtcacgat 151  Q
    || ||||||||||||||||    
T  5266592 ctcgaaatcgtgtcacgat 5266610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 49 - 200
Target Start/End: Original strand, 2171939 - 2172090
Alignment:
Q  49 acttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcac 148  Q
    ||||||| |||||||||   |||||||||||||||||||||||||||| ||| |||||||  ||||||||| ||||| | ||  |  |||||||||||||    
T  2171939 acttaacgagcaagttttacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcac 2172038  T
Q  149 gataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 200  Q
    ||| ||||| || |||| ||||||||||||||||||||||||||||||||||    
T  2172039 gatgccaaattcatgtcccgatttctctgttcttccagaccacaaatttgaa 2172090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 28155283 - 28155164
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||||| ||| |||  ||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  28155283 tgtcacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaagatcgtgccac 28155184  T
Q  101 aatttggcgtcctgcaaact 120  Q
     |||| ||  ||||||||||    
T  28155183 gattttgcaccctgcaaact 28155164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 33 - 201
Target Start/End: Original strand, 22709464 - 22709632
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  || ||||||| |||||||||   |||||||||||||||||||||||||||| ||| |||||||  ||||||||| |||||   ||      
T  22709464 agtccttatcatggaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcatggcat 22709563  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    |   ||||||||||||| | ||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  22709564 cacaaaatcgtgtcacgttgccaaattcgtgtcatgatttctctgttcttccagaccacaaatttgaag 22709632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 5343852 - 5344064
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    ||||||||| |||||||| ||| | |  ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  5343852 tgtcacgatatgcaacggtccccaagttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcac 5343951  T
Q  101 aatttggcgtcctgcaaac-tagctctctgcc-acttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttg 198  Q
     |||| || | | | | || | |||| || ||  | ||  |||||||||||||  | |||||||| ||||||||||||||||| ||| ||||||||||||    
T  5343952 gattttgctttcagaagacttggctcacttcctccctg--atcgtgtcacgatgaccaaatcgtgacacgatttctctgttctcccaaaccacaaatttg 5344049  T
Q  199 aagtcaatttcaaca 213  Q
    ||| ||||| |||||    
T  5344050 aagccaattccaaca 5344064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 46 - 201
Target Start/End: Complemental strand, 27647635 - 27647480
Alignment:
Q  46 gatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgccacttgaaatcgtgt 145  Q
    |||||||||| ||||||||||   |||||||||||||||| ||  |||||||||| |||| ||  ||||||| ||||||| | ||  |  ||||||||||    
T  27647635 gatacttaacgagcaagtttcacgatcgtgtcacgatttctcacaatcgtgccacgattttgcaccctgcaacctagctcacggcaccccgaaatcgtgt 27647536  T
Q  146 cacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    |||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  27647535 cacgatgccacaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 27647480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 6136367 - 6136547
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaac-tagctctctgcc 131  Q
    |||||||||||  |||||||||| |||||||||||| |||||||||||||||||||  |||||||||| ||||     ||||||| | |||||| | ||     
T  6136367 agtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgattttcacccctgcaaccctagctcacggca 6136466  T
Q  132 acttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
     |  ||||||||||| |||| ||||||||||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  6136467 tcc-gaaatcgtgtctcgattccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 6136547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 34 - 213
Target Start/End: Complemental strand, 6027013 - 6026834
Alignment:
Q  34 gtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaac-tagctctctgcca 132  Q
    ||||||||||  |||||||||| |||||||||||| ||||||||||||||| || | |||||||||| |||||    ||||||| | |||||||| ||      
T  6027013 gtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctctc-gcac 6026915  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    || ||||||||||||| || ||  ||||||||||||||||| || |||||||| ||||||||||||||| |||| ||||||    
T  6026914 ctcgaaatcgtgtcacaatgccgcaatcgtgtcacgatttccctattcttccaaaccacaaatttgaagacaatctcaaca 6026834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 33 - 216
Target Start/End: Complemental strand, 25420977 - 25420794
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaac-tagctctctgcc 131  Q
    |||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | |||||||||| |||||    ||||||| | |||||| | ||     
T  25420977 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctcacggca 25420878  T
Q  132 acttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaacacta 216  Q
     |  |||||||||||||| | ||||||| ||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||    
T  25420877 tcc-gaaatcgtgtcacggtcccaaaattgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacacta 25420794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 33 - 201
Target Start/End: Complemental strand, 411867 - 411698
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagttt-ctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcc 131  Q
    |||||||||||  || ||||||| ||||||||| |  ||||||||||||||||||||  |||||| ||| |||||||  |||||| |||||||| | ||     
T  411867 agtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcagactagctcacggca 411768  T
Q  132 acttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
     |  ||||| ||||||| || ||||| ||||||||||||||| || ||||||||||||||||||||||||    
T  411767 ccacgaaattgtgtcacaatgccaaattcgtgtcacgatttccctattcttccagaccacaaatttgaag 411698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 33 - 201
Target Start/End: Original strand, 3073162 - 3073330
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  || ||||||| |||||||||   |||||||||||||||||| |  |||||| ||| |||||||  |||| | || ||||| | ||      
T  3073162 agtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttccaacaatcgtgtcacgatttggcaccctgtagaccagctcacggcat 3073261  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    |  |||||||||||||||| ||||| ||||||||||||||  |||||||||||||||||||||||||||    
T  3073262 cacgaaatcgtgtcacgatgccaaattcgtgtcacgattttcctgttcttccagaccacaaatttgaag 3073330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 33342507 - 33342688
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttccca-agatcgtgccacaatttggcgtcctgcaaac-tagctctctgc 130  Q
    |||||||||||  |||||||||| |||||||||||  ||||||||||||||||||| | |||||||||| |||||    ||||||| | |||||| | ||    
T  33342507 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacgatttgcacccctgcaaccctagctcacggc 33342606  T
Q  131 cacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
      |  ||||||| ||| |||| |||||||||||||||||||||  |||||||||| ||||||||||||||| |||| ||||||    
T  33342607 atcc-gaaatcgcgtcgcgatcccaaaatcgtgtcacgatttccatgttcttccaaaccacaaatttgaagacaatctcaaca 33342688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 33 - 201
Target Start/End: Complemental strand, 34166847 - 34166678
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgattt-cccaagatcgtgccacaatttggcgtcctgcaaac-tagctctctgc 130  Q
    |||||||||||  |||||||||| |||||||||||  ||||||||||||||| ||||| |||||| ||| |||||    ||||||| | || ||| | ||    
T  34166847 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcacggc 34166748  T
Q  131 cacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
      |  ||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  34166747 atcc-gaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 34166678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 33 - 201
Target Start/End: Complemental strand, 13151030 - 13150861
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgattt-cccaagatcgtgccacaatttggcgtcctgcaaac-tagctctctgc 130  Q
    |||||||||||  |||||||||| |||||||||||  ||||||||||||||| ||||| |||||| ||| |||||    ||||||| | || ||| | ||    
T  13151030 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcacggc 13150931  T
Q  131 cacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
      |  ||||||| |||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||    
T  13150930 atcc-gaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagccacaaatttgaag 13150861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 5266596 - 5266656
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaacacta 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  5266596 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacacta 5266656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 156 - 214
Target Start/End: Complemental strand, 14737142 - 14737084
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaacac 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  14737142 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacac 14737084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 49 - 213
Target Start/End: Original strand, 23896792 - 23896957
Alignment:
Q  49 acttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgccacttgaaa-tcgtgtca 147  Q
    |||||||||||||||||   ||||||||||||||||| ||| ||||| |||| ||||| |  ||||||||| | ||| | |  | |  ||| ||||||||    
T  23896792 acttaaccagcaagtttaaaaatcgtgtcacgatttcacaaaatcgtaccacgatttgacaccctgcaaaccaactcac-gatattacaaaatcgtgtca 23896890  T
Q  148 cgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtc-aatttcaaca 213  Q
    |||| |||||||||||||||||||| ||||||||| || ||||||||||||||| | ||||||||||    
T  23896891 cgatgccaaaatcgtgtcacgatttttctgttctttcaaaccacaaatttgaaggcaaatttcaaca 23896957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 26253666 - 26253602
Alignment:
Q  137 aaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    ||||| ||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  26253666 aaatcttgtcacgatgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaag 26253602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 33 - 201
Target Start/End: Complemental strand, 34164625 - 34164456
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgattt-cccaagatcgtgccacaatttggcgtcctgcaaac-tagctctctgc 130  Q
    |||||||||||  |||||||||| |||||||||||  ||||||||||||||| ||||| |||||| ||| |||||    ||||||| | || ||| | ||    
T  34164625 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgatttgcacccctgcaaccctaactcacggc 34164526  T
Q  131 cacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
      |  ||||||| |||||||| ||| ||||||||||||||||| |||||||||||  ||||||||||||||    
T  34164525 atcc-gaaatcgcgtcacgatcccagaatcgtgtcacgatttccctgttcttccaagccacaaatttgaag 34164456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 136 - 201
Target Start/End: Original strand, 6097908 - 6097973
Alignment:
Q  136 gaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    |||||||||||||||| ||||| |||||||| |||||| ||||||||||| |||||||||||||||    
T  6097908 gaaatcgtgtcacgatgccaaattcgtgtcaggatttccctgttcttccaaaccacaaatttgaag 6097973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 28155145 - 28155090
Alignment:
Q  158 atcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||    
T  28155145 atcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaattccaaca 28155090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 16652773 - 16652716
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    |||||||||||||||||| |||||||| |||||||||||||||||| |||| ||||||    
T  16652773 aaatcgtgtcacgatttccctgttctttcagaccacaaatttgaagacaatctcaaca 16652716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 136 - 201
Target Start/End: Complemental strand, 34151905 - 34151840
Alignment:
Q  136 gaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    ||||||| |||||||| ||| ||||||||||||||||| |||||||||||  ||||||||||||||    
T  34151905 gaaatcgcgtcacgatcccagaatcgtgtcacgatttccctgttcttccaagccacaaatttgaag 34151840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 5017026 - 5016975
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatt 207  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||| |||||    
T  5017026 aaatcgtgtcacgatttttctgttcttccaaaccacaaatttgaagccaatt 5016975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 31086003 - 31085952
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatt 207  Q
    |||||||||||||||||||||||||||| | ||||||||||||||| |||||    
T  31086003 aaatcgtgtcacgatttctctgttcttctaaaccacaaatttgaagccaatt 31085952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 156 - 215
Target Start/End: Complemental strand, 5571806 - 5571747
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaacact 215  Q
    ||||||||||||||||||||| |||| ||| | ||||||||||||| ||| |||||||||    
T  5571806 aaatcgtgtcacgatttctctattctcccaaaacacaaatttgaagacaaattcaacact 5571747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 24714938 - 24714991
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccac-aaatttgaagtcaattt 208  Q
    |||||||||||||||||||||||| ||||| ||||| |||||||||| ||||||    
T  24714938 aaatcgtgtcacgatttctctgtttttccaaaccacaaaatttgaagccaattt 24714991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 18234650 - 18234701
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatt 207  Q
    |||||||||||  ||||||||||||||||| ||||||||||| ||| |||||    
T  18234650 aaatcgtgtcaacatttctctgttcttccaaaccacaaatttaaagccaatt 18234701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 5757116 - 5757046
Alignment:
Q  49 acttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaac 119  Q
    |||||||||||||||||   ||||||||||||||||| ||| ||||| |||| ||||| |  |||||||||    
T  5757116 acttaaccagcaagtttgaaaatcgtgtcacgatttcacaaaatcgtaccacgatttgacaccctgcaaac 5757046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 185
Target Start/End: Original strand, 603772 - 603801
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttcca 185  Q
    ||||||||||||||||||||||||||||||    
T  603772 aaatcgtgtcacgatttctctgttcttcca 603801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 177
Target Start/End: Original strand, 5413942 - 5413982
Alignment:
Q  137 aaatcgtgtcacgataccaaaatcgtgtcacgatttctctg 177  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  5413942 aaatcgtgtcacgattaccaaatcgtgtcacgatttctctg 5413982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 157; Significance: 2e-83; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 34766 - 34554
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  34766 tgtcacgatctgcaacggacccaaggtagacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 34667  T
Q  101 aatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 200  Q
     |||||||||| ||||||| | ||  | |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  34666 gatttggcgtcatgcaaacaaactaacggccacttgaaatagtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 34567  T
Q  201 gtcaatttcaaca 213  Q
    | |||| ||||||    
T  34566 gccaatatcaaca 34554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 153; Significance: 6e-81; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 1456850 - 1456638
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    ||||||||| |||| | | ||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  1456850 tgtcacgatttgcatctgacccaaggtagacaagtccttatcagggatacttaacaagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 1456751  T
Q  101 aatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 200  Q
     ||||||||||||| |||||||||| | ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1456750 gatttggcgtcctgtaaactagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 1456651  T
Q  201 gtcaatttcaaca 213  Q
    | |||| ||||||    
T  1456650 gccaatatcaaca 1456638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 20 - 213
Target Start/End: Original strand, 27450216 - 27450409
Alignment:
Q  20 cccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaac 119  Q
    ||||||| |||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27450216 cccaaggtagaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac 27450315  T
Q  120 tagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    |||||| | ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  27450316 tagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 27450409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 20 - 213
Target Start/End: Original strand, 27445373 - 27445566
Alignment:
Q  20 cccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaac 119  Q
    ||||||| |||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27445373 cccaaggtagaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac 27445472  T
Q  120 tagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    |||||| | ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||    
T  27445473 tagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttctagaccacaaatttgaagccaatatcaaca 27445566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 35 - 213
Target Start/End: Complemental strand, 29402728 - 29402550
Alignment:
Q  35 tccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgccact 134  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||   ||||||    
T  29402728 tccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcatggccact 29402629  T
Q  135 tgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  29402628 tgaaatcgtgccacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 29402550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 20 - 214
Target Start/End: Original strand, 43599124 - 43599319
Alignment:
Q  20 cccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaac 119  Q
    ||||||| |||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  43599124 cccaaggtagaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac 43599223  T
Q  120 tagctctctg-ccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaacac 214  Q
    |||||| | | || ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  43599224 tagctcacggcccccttgaaatcgtgtcacgacgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacac 43599319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 20 - 214
Target Start/End: Original strand, 43604616 - 43604811
Alignment:
Q  20 cccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaac 119  Q
    ||||||| |||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  43604616 cccaaggtagaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac 43604715  T
Q  120 tagctctctg-ccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaacac 214  Q
    |||||| | | || ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  43604716 tagctcacggcccccttgaaatcgtgtcacgacgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacac 43604811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 20 - 214
Target Start/End: Original strand, 43610108 - 43610303
Alignment:
Q  20 cccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaac 119  Q
    ||||||| |||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  43610108 cccaaggtagaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac 43610207  T
Q  120 tagctctctg-ccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaacac 214  Q
    |||||| | | || ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  43610208 tagctcacggcccccttgaaatcgtgtcacgacgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacac 43610303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 15045068 - 15045279
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||||| ||| |||  ||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  15045068 tgtcacgatctgcaacggaccccaggttgaccagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 15045167  T
Q  101 aatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 200  Q
     ||||||||||||||||||| |||| | | ||  | ||||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||    
T  15045168 gatttggcgtcctgcaaactggctcac-ggcatctcaaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccaaactacaaatttgaa 15045266  T
Q  201 gtcaatttcaaca 213  Q
    | |||| ||||||    
T  15045267 gccaatatcaaca 15045279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 30631768 - 30631948
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||| |||| | ||      
T  30631768 agtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcgtcctgcaaactggctcacggcac 30631867  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  30631868 ctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 30631948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 28807288 - 28807076
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||||| ||| |||  ||| |||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  28807288 tgtcacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccaacaagtttctggatcgtgtcacgatttcccaagatcgtgccac 28807189  T
Q  101 aatttggcgtcctgcaaac-tagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 199  Q
     |||| ||  ||||||||| | |||| | | ||  | | |||||||||||||  |||||||||| ||||||| |||||||||||||||||| ||||||||    
T  28807188 gattttgcaccctgcaaacttggctcac-ggcatctcagatcgtgtcacgattgcaaaatcgtgacacgattcctctgttcttccagaccataaatttga 28807090  T
Q  200 agtcaatttcaaca 213  Q
    || ||||| |||||    
T  28807089 agccaattccaaca 28807076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 20 - 151
Target Start/End: Original strand, 43592679 - 43592811
Alignment:
Q  20 cccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaac 119  Q
    ||||||| |||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  43592679 cccaaggtagaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac 43592778  T
Q  120 tagctctctg-ccacttgaaatcgtgtcacgat 151  Q
    |||||| | | || |||||||||||||||||||    
T  43592779 tagctcacggcccccttgaaatcgtgtcacgat 43592811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 33768559 - 33768766
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||||| ||| |||  ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33768559 tgtcacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 33768658  T
Q  101 aatttggcgtcctgcaaac-tagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 199  Q
     |||| || ||| |||||| | |||| | | ||  |   |||||||||||||  | |||||| | ||||||| ||||||||||||| |||||||||||||    
T  33768659 gattttgcttccagcaaacttggctcac-ggcatctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttga 33768757  T
Q  200 agtcaattt 208  Q
    || ||||||    
T  33768758 agccaattt 33768766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 33791691 - 33791898
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||||| ||| |||  ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33791691 tgtcacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 33791790  T
Q  101 aatttggcgtcctgcaaac-tagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 199  Q
     |||| || ||| |||||| | |||| | | ||  |   |||||||||||||  | |||||| | ||||||| ||||||||||||| |||||||||||||    
T  33791791 gattttgcttccagcaaacttggctcac-ggcatctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttga 33791889  T
Q  200 agtcaattt 208  Q
    || ||||||    
T  33791890 agccaattt 33791898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 33 - 200
Target Start/End: Original strand, 24136303 - 24136470
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  |||||||||| |||||||||   |||||||||||||||||||||||||||| ||| |||||||  ||||||||||||||| | ||      
T  24136303 agtccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaactagctcacggcat 24136402  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 200  Q
    |  ||||| |||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||    
T  24136403 cacgaaattgtgtcacgatgccaaattcgtgtcacgatttctgtgttcttccagaccacaaatttgaa 24136470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 2785750 - 2785957
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||||  ||| |||  ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2785750 tgtcacgatctgcaacgctccccaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 2785849  T
Q  101 aatttggcgtcctgcaaac-tagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 199  Q
     |||| || ||| |||||| | |||| | | ||  |   |||||||||||||  | |||||| | ||||||| ||||||||||||| |||||||||||||    
T  2785850 gattttgcttccagcaaacttggctcac-ggcatctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttga 2785948  T
Q  200 agtcaattt 208  Q
    || ||||||    
T  2785949 agccaattt 2785957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 31396702 - 31396495
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||||| ||| |||  ||| |||||||||||| || ||||||||| ||||| |||||||||||||||||||||||||||||||| |||    
T  31396702 tgtcacgatctgcaacggtccccaggttgaccagtccttatcagagaaacttaaccaacaagtgtctgaatcgtgtcacgatttcccaagatcgtggcac 31396603  T
Q  101 aatttggcgtcctgcaaac-tagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 199  Q
     |||| || ||| |||||| |||||| ||||| | |   |||||||||||||  | |||||||| ||||||| ||||||||| ||| |||||||||||||    
T  31396602 gattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttga 31396504  T
Q  200 agtcaattt 208  Q
    || ||||||    
T  31396503 agccaattt 31396495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 20 - 151
Target Start/End: Original strand, 31180656 - 31180787
Alignment:
Q  20 cccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaac 119  Q
    |||||||  ||| ||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  31180656 cccaaggttgaccagtccttatcagtgatacttaacgagaaagtctctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac 31180755  T
Q  120 tagctctctgccacttgaaatcgtgtcacgat 151  Q
    |||||| |  |  |||||||||||||||||||    
T  31180756 tagctcacgacaccttgaaatcgtgtcacgat 31180787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 37561159 - 37560947
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||||| ||| |||   || |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  37561159 tgtcacgatctgcaacggtccccaggttaaccagtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaagatcgtgccac 37561060  T
Q  101 aatttggcgtcctgcaaac-tagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 199  Q
     ||||| |  | |  |||| | |||| | | ||  | | |||||||||||||    |||||||||||||||| |||||||||||||||||||||||||||    
T  37561059 gatttgcctccatcaaaacttggctcac-ggcatctcagatcgtgtcacgattatcaaatcgtgtcacgattactctgttcttccagaccacaaatttga 37560961  T
Q  200 agtcaatttcaaca 213  Q
    || ||| |||||||    
T  37560960 agccaaattcaaca 37560947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 10593023 - 10592844
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | |||||||||| |||| ||  ||||||| ||| ||| | || |    
T  10593023 agtccttatcacggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgcaacctatctcacggc-a 10592925  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    |  | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  10592924 cccggaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 10592844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 33 - 201
Target Start/End: Original strand, 18442052 - 18442220
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  || ||||||| |||||||||   ||||||||||||||||||||  |||||| ||| |||||||  ||||||||| ||||| | ||      
T  18442052 agtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcat 18442151  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    | ||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  18442152 catgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 18442220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 22536672 - 22536852
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  |||||||||| ||||||||||   |||||||||||||||||||  || ||||||| |||| ||  ||||||| ||||||| | ||      
T  22536672 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaattgtgccacgattttgcaccctgcaacctagctcacggcac 22536771  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    |  |||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  22536772 cccgaaatcgtgtcacgatgccacaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 22536852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 33 - 201
Target Start/End: Complemental strand, 26177647 - 26177479
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  || ||||||| |||||||||   |||||||||||||||||||| ||||||| ||| |||||||  ||||||||| ||||| | ||      
T  26177647 agtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccatgatcgtgtcacgatttggcaccctgcaaaccagctcacggcat 26177548  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    |  |||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  26177547 cacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 26177479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 31401559 - 31401352
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||||| ||| |||  ||| |||||||||||| || |||||| ||||||||||||||||| ||||||||||||||||||||||| |||    
T  31401559 tgtcacgatctgcaacggtccccaggttgaccagtccttatcagagaaacttaagcagcaagtttctgaatcatgtcacgatttcccaagatcgtggcac 31401460  T
Q  101 aatttggcgtcctgcaaac-tagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 199  Q
     |||| || ||| |||||| |||||| ||||| | |   |||||||||||||  | |||||||| ||||||| |||| |||| ||| |||||||||||||    
T  31401459 gattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgccaaatcgtgacacgattcctctattctcccaaaccacaaatttga 31401361  T
Q  200 agtcaattt 208  Q
    || ||||||    
T  31401360 agccaattt 31401352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 33 - 201
Target Start/End: Original strand, 9789628 - 9789796
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  || ||||||| |||||||||   ||||||||||||||||||||  |||||| ||| |||||||  ||||||||| ||||| | ||      
T  9789628 agtccttatcatggaaacttaacgagcaagttttcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcat 9789727  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    |  |||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  9789728 cacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 9789796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 33 - 201
Target Start/End: Complemental strand, 29720147 - 29719978
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagttt-ctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcc 131  Q
    |||||||||||  || ||||||| ||||||||| |  ||||||||||||||||||||  |||||| ||| |||||||  |||||| |||||||| | ||     
T  29720147 agtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcagactagctcacggca 29720048  T
Q  132 acttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
     |  |||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  29720047 ccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 29719978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 34 - 201
Target Start/End: Complemental strand, 16407821 - 16407654
Alignment:
Q  34 gtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgccac 133  Q
    ||||||||||  || ||||||| |||||||||   ||||||||||||||| | |||||||||| ||| |||||||  ||||||||| ||||| | ||  |    
T  16407821 gtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatc 16407722  T
Q  134 ttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
       |||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||    
T  16407721 acaaaatcgtgtcacgatgtcaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 16407654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 37556305 - 37556125
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaac-tagctctctgcc 131  Q
    |||||||||||| ||||||||||||||||||||||  |||||||||| |||||||||||||||||||| ||||| |  | |  |||| | |||| | | |    
T  37556305 agtccttatcagagatacttaaccagcaagtttctagatcgtgtcacaatttcccaagatcgtgccacgatttgcctccatcaaaacttggctcac-ggc 37556207  T
Q  132 acttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    |  | | |||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||    
T  37556206 atctcagatcgtgtcacgattaccaaatcgtgtcacgattactctgttcttccagaccacaaatttgaagccaaattcaaca 37556125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 33 - 201
Target Start/End: Complemental strand, 16409258 - 16409090
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  || ||||||| |||||||||   ||||||||||||||| | |||||||||| |||||||||||  | ||||||| ||||| |  |      
T  16409258 agtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacaatttggcaccttgcaaaccagctcacgacat 16409159  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    |   ||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  16409158 cacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaag 16409090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 35 - 201
Target Start/End: Complemental strand, 29722332 - 29722165
Alignment:
Q  35 tccttatcagtgatacttaaccagcaagttt-ctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgccac 133  Q
    |||||||||  || ||||||| ||||||||| |  ||||||||||||||||||||  |||||| ||| |||||||  | |||| |||||||| | ||  |    
T  29722332 tccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccatgcagactagctcacagcacc 29722233  T
Q  134 ttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
      |||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  29722232 acgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 29722165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 33 - 201
Target Start/End: Complemental strand, 25077886 - 25077718
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaac-tagctctctgcc 131  Q
    |||||||||||  |||||||||| |||||||||||| |||||||||||||||||||  |||||| ||| |||||    ||| ||| | |||||| | ||     
T  25077886 agtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgacacgatttgcacccctacaaccctagctcacggc- 25077788  T
Q  132 acttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    || |  ||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25077787 acctccaatcgcgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 25077718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 33 - 201
Target Start/End: Complemental strand, 25135855 - 25135687
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaac-tagctctctgcc 131  Q
    |||||||||||  |||||||||| |||||||||||| |||||||||||||||||||  |||||| ||| |||||    ||| ||| | |||||| | ||     
T  25135855 agtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgacacgatttgcacccctacaaccctagctcacggc- 25135757  T
Q  132 acttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    || |  ||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25135756 acctccaatcgcgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 25135687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 33 - 201
Target Start/End: Complemental strand, 26170538 - 26170370
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  || ||||||| |||||||||   |||  ||||||||||||||| ||||||| ||| |||||||  ||||||||| ||||| | ||      
T  26170538 agtccttatcatggaaacttaacgagcaagtttgcaaattatgtcacgatttcccacgatcgtgtcacgatttggcaccctgcaaaccagctcacggcat 26170439  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    |   ||||||||||||||||||||| ||||||||||||||| ||||||||||| |||| ||||||||||    
T  26170438 cacaaaatcgtgtcacgataccaaattcgtgtcacgatttccctgttcttccataccataaatttgaag 26170370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 40379858 - 40379678
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaac-tagctctctgcc 131  Q
    |||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | |||||| ||| | || ||  ||||||| | |||||| | ||     
T  40379858 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctcacggc- 40379760  T
Q  132 acttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    || |  |||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  40379759 acctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 40379678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 91 - 201
Target Start/End: Original strand, 29752267 - 29752377
Alignment:
Q  91 atcgtgccacaatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagacca 190  Q
    |||||||||| |||||||  ||||||| ||||||| | ||  |  |||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||    
T  29752267 atcgtgccacgatttggcaccctgcaacctagctcacggcagcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagacca 29752366  T
Q  191 caaatttgaag 201  Q
    |||||||||||    
T  29752367 caaatttgaag 29752377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 16546396 - 16546216
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaac-tagctctctgcc 131  Q
    |||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | |||||| ||| | || ||  ||||||| | |||||| | ||     
T  16546396 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctcacggc- 16546298  T
Q  132 acttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    || |  |||||||||||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  16546297 acctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 16546216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 40382069 - 40381889
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaac-tagctctctgcc 131  Q
    |||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | |||||| ||| | || ||  ||||||| | |||||| | ||     
T  40382069 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctcacggc- 40381971  T
Q  132 acttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    || |  |||||||||||||| ||||||||||| ||||||||| |||||||| |||||||||||||||||| |||| ||||||    
T  40381970 acctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttctttcagaccacaaatttgaagacaatctcaaca 40381889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 49 - 201
Target Start/End: Complemental strand, 9352972 - 9352820
Alignment:
Q  49 acttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcac 148  Q
    |||||||||||||||||   ||||||||||||||||| ||  |||||||||| ||||| |  ||||||||| ||||| | ||      ||||||||||||    
T  9352972 acttaaccagcaagtttgaaaatcgtgtcacgatttcacagaatcgtgccacgatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcac 9352873  T
Q  149 gataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    ||| ||| ||||| |||||||||||||||||||| || |||||||||||||||    
T  9352872 gatgccacaatcgcgtcacgatttctctgttctttcaaaccacaaatttgaag 9352820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 15465048 - 15465112
Alignment:
Q  137 aaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  15465048 aaatcgtgtcacgataccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaag 15465112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 16544174 - 16543994
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaac-tagctctctgcc 131  Q
    |||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | |||||| ||| | || ||  |||| || | |||||| | ||     
T  16544174 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgtaaccctagctcacagc- 16544076  T
Q  132 acttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    || |  |||||||||||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  16544075 acctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 16543994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 31180773 - 31180830
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  31180773 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 31180830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 43592797 - 43592854
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  43592797 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 43592854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 36931920 - 36931856
Alignment:
Q  137 aaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    |||||||| |||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  36931920 aaatcgtgccacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 36931856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 14520796 - 14520848
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaattt 208  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  14520796 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattt 14520848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 91 - 201
Target Start/End: Original strand, 29751601 - 29751711
Alignment:
Q  91 atcgtgccacaatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagacca 190  Q
    |||||| ||| |||||||  ||||||| ||||||| | ||  |  |||||||||||  ||| ||||| || |||||||||||| ||||||||||||||||    
T  29751601 atcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgtgtcgtgatgccaaattcatgtcacgatttccctgttcttccagacca 29751700  T
Q  191 caaatttgaag 201  Q
    |||||||||||    
T  29751701 caaatttgaag 29751711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 35388196 - 35388237
Alignment:
Q  164 tcacgatttctctgttcttccagaccacaaatttgaagtcaa 205  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  35388196 tcacgatttctctgttcttccagaccacaaatttgaagtcaa 35388237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 125
Target Start/End: Original strand, 38219849 - 38219941
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctc 125  Q
    |||||||||||  || ||||||| |||||||||   ||||||||||| |||||||||||||||| ||| |||||||  ||| ||||| |||||    
T  38219849 agtccttatcatggaaacttaacaagcaagtttgaaaatcgtgtcacaatttcccaagatcgtgtcacgatttggcaccctacaaaccagctc 38219941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 170 - 213
Target Start/End: Original strand, 43625605 - 43625648
Alignment:
Q  170 tttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    |||||||||||||||||||||||||||||||| |||| ||||||    
T  43625605 tttctctgttcttccagaccacaaatttgaagccaatatcaaca 43625648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 12083708 - 12083658
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaat 206  Q
    |||||||||||||||||||||||||||||| |||| |||||| ||| ||||    
T  12083708 aaatcgtgtcacgatttctctgttcttccaaaccataaatttaaagccaat 12083658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 11916502 - 11916457
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    |||| |||||||||||||||||||||| || |||||||||||||||    
T  11916502 aaattgtgtcacgatttctctgttctttcaaaccacaaatttgaag 11916457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 29751564 - 29751615
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgattt 84  Q
    |||||||||||  |||||||||| ||||||||||  ||||||||||||||||    
T  29751564 agtccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgattt 29751615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 177
Target Start/End: Complemental strand, 25412436 - 25412396
Alignment:
Q  137 aaatcgtgtcacgataccaaaatcgtgtcacgatttctctg 177  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  25412436 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 25412396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 149; Significance: 1e-78; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 3549 - 3337
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||||| ||| |||  ||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3549 tgtcacgatctgcaacggtccccaggttgactagtccttatcattgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 3450  T
Q  101 aatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 200  Q
     |||||||||||| ||||||||||| | |||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||    
T  3449 gatttggcgtccttcaaactagctcacggccacttgaaatcgtgtcacgatgtcaaaatcgtgtcacgatttctcttttcttccagaccacaaatttgaa 3350  T
Q  201 gtcaatttcaaca 213  Q
    | |||| ||||||    
T  3349 gccaatatcaaca 3337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 138; Significance: 5e-72; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 20 - 213
Target Start/End: Complemental strand, 28501345 - 28501152
Alignment:
Q  20 cccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaac 119  Q
    |||||||  |||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||    
T  28501345 cccaaggttgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggtgtcctgcaaac 28501246  T
Q  120 tagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    |||||| | ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||    
T  28501245 tagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaggccacaaatttgaagccaatatcaaca 28501152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 20 - 213
Target Start/End: Complemental strand, 28503512 - 28503319
Alignment:
Q  20 cccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaac 119  Q
    |||||||  |||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||    
T  28503512 cccaaggttgacaagtccttatcagggatacttaacgagcaagtttctgaattgtgtcacgatttcccaagatcgtgccacgatttggcgtccagcaaac 28503413  T
Q  120 tagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    |||||| | ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||    
T  28503412 tagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaggccacaaatttgaagccaatatcaaca 28503319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 7167702 - 7167882
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||      
T  7167702 agtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcac 7167801  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||    
T  7167802 cttgaaattgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaacacaaatttgaagccaatatcaaca 7167882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 22172874 - 22172662
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    ||||||||| ||||||||  ||||||  ||| |||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22172874 tgtcacgatttgcaacggaaccaaggttgaccagtccttatcagagatccttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 22172775  T
Q  101 aatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 200  Q
     ||||||||||||||||||| |||| | ||  || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22172774 gatttggcgtcctgcaaactggctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 22172675  T
Q  201 gtcaatttcaaca 213  Q
    | |||| ||||||    
T  22172674 gccaatatcaaca 22172662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 40372436 - 40372256
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||      
T  40372436 agtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcac 40372337  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  40372336 ctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 40372256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 18656816 - 18657029
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||||| ||| |||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  18656816 tgtcacgatctgcaacggtccccaggttgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcac 18656915  T
Q  101 aatttggcgtcctgcaaactagc-tctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 199  Q
     ||||||||||||||||||| || || | ||  |  |||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||    
T  18656916 gatttggcgtcctgcaaacttgcttcacggcaccacgaaatcgtgtcacgatgccaaaatcgtgtcatgatttctctgttctttcagaccacaaatttga 18657015  T
Q  200 agtcaatttcaaca 213  Q
    || |||| ||||||    
T  18657016 agccaatatcaaca 18657029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 8477822 - 8478002
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  |||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||| | ||      
T  8477822 agtccttatcaaggatacttaacgagcaagtttctcaatcgtgtcacgatttcccaagatcgtgccacgatttggcatccagcaaactagctcacggcac 8477921  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    || |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||    
T  8477922 ctcgaaatcgtgtcacgatgccaaaatcgtgtcacaatttctctgttcttccagaccacaaatttgaagccaatgtcaaca 8478002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 33 - 197
Target Start/End: Complemental strand, 27352261 - 27352097
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||| ||||| | ||      
T  27352261 agtccttatcagtgataattaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggtgttctgcaaacaagctcacggcac 27352162  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaattt 197  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||    
T  27352161 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttttctgttcttcgagaccacaaattt 27352097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 8512615 - 8512827
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||||| ||| | |  ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8512615 tgtcacgatctgcaacggtccccaagttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 8512714  T
Q  101 aatttggcgtcctgcaaac-tagctctctgcc-acttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttg 198  Q
     |||| || ||| |||||| |||||| |||||  | ||  ||||||||||||   |||||||||| ||||||| ||||||||| ||| ||||| ||||||    
T  8512715 gattttgcttccagcaaacttagctcactgcctccctg--atcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttg 8512812  T
Q  199 aagtcaatttcaaca 213  Q
    ||||||||| |||||    
T  8512813 aagtcaattccaaca 8512827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 2672631 - 2672431
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||||| ||| |||  ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  2672631 tgtcacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtggcac 2672532  T
Q  101 aatttggcgtcctgcaaac-tagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 199  Q
     |||| || ||| |||||| | |||| | | ||  |   |||||||||||||  |||||||||| ||||||| |||||||||||||||||||||||||||    
T  2672531 gattttgcttccagcaaacttggctc-ccggcatctccgatcgtgtcacgattacaaaatcgtgacacgattcctctgttcttccagaccacaaatttga 2672433  T
Q  200 ag 201  Q
    ||    
T  2672432 ag 2672431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 8517495 - 8517707
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||||| ||| | |  ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8517495 tgtcacgatctgcaacggtccccaagttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 8517594  T
Q  101 aatttggcgtcctgcaaac-tagctctctgcc-acttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttg 198  Q
     |||| || ||| |||||| |||||| |||||  | ||  ||||||||||||   |||||||||| ||||||| ||||||||| | | ||||| ||||||    
T  8517595 gattttgcttccagcaaacttagctcactgcctccctg--atcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcctaaaccactaatttg 8517692  T
Q  199 aagtcaatttcaaca 213  Q
    ||||||||| |||||    
T  8517693 aagtcaattccaaca 8517707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 2676787 - 2676587
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||||| ||| |||  ||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  2676787 tgtcacgatctgcaacggtccccaggttgaccagtccttatcagagattcttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtggcac 2676688  T
Q  101 aatttggcgtcctgcaaac-tagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 199  Q
     |||| || ||| |||||| | |||| | | ||  |   |||||||||||||  |||||||||| ||||||| |||||||||||||||||||||||||||    
T  2676687 gattttgcttccagcaaacttggctc-ccgacatctccgatcgtgtcacgattacaaaatcgtgacacgattcctctgttcttccagaccacaaatttga 2676589  T
Q  200 ag 201  Q
    ||    
T  2676588 ag 2676587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 33 - 167
Target Start/End: Complemental strand, 2671245 - 2671111
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  |||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| | ||      
T  2671245 agtccttatcaaggatacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcatcctgcaaactagctcacggcac 2671146  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcac 167  Q
    ||||||||| ||||||||| |||||||||||||||    
T  2671145 cttgaaatcatgtcacgatgccaaaatcgtgtcac 2671111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 6716265 - 6716085
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  |||||||||| ||||||||||   |||||||||||||||||||  |||||| ||| |||| ||  ||||||| ||||||| | ||      
T  6716265 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgcaccctgcaacctagctcacggcac 6716166  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    |  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||||    
T  6716165 cccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttcaagacaatctcaaca 6716085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 28 - 215
Target Start/End: Complemental strand, 54634895 - 54634708
Alignment:
Q  28 agacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctc 127  Q
    |||| |||||||||||  |||||||||| ||||||||||   |||||||||||||||||||  |||||||||| |||| ||  |||||||  |||||| |    
T  54634895 agaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgccacgattttgcaccctgcaacttagctcac 54634796  T
Q  128 tgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaacact 215  Q
     ||  |  ||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||    
T  54634795 ggcaccccgaaatcgtgtcacaatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacact 54634708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 4 - 213
Target Start/End: Original strand, 24968495 - 24968704
Alignment:
Q  4 cacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaat 103  Q
    |||||| |||||||| ||| |||  ||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  24968495 cacgatttgcaacggtccccaggttgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgat 24968594  T
Q  104 ttggcgtcctgcaaac-tagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagt 202  Q
    || || ||| |||||| | |||| ||||| |     |||||||||||||  | |||||||| ||||||| || |||||||||| ||||| ||||||||||    
T  24968595 tttgcttccagcaaacttggctcactgcctc-cccgatcgtgtcacgattgccaaatcgtgacacgattcctttgttcttccaaaccactaatttgaagt 24968693  T
Q  203 caatttcaaca 213  Q
    ||||| |||||    
T  24968694 caattccaaca 24968704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 33 - 151
Target Start/End: Complemental strand, 8738703 - 8738585
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| | ||      
T  8738703 agtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttagcgtcctgcaaactagctcacggcac 8738604  T
Q  133 cttgaaatcgtgtcacgat 151  Q
    ||||||||| |||||||||    
T  8738603 cttgaaatcatgtcacgat 8738585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 33 - 151
Target Start/End: Complemental strand, 9090941 - 9090823
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| | ||      
T  9090941 agtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttagcgtcctgcaaactagctcacggcac 9090842  T
Q  133 cttgaaatcgtgtcacgat 151  Q
    ||||||||| |||||||||    
T  9090841 cttgaaatcatgtcacgat 9090823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 49 - 201
Target Start/End: Original strand, 1306439 - 1306591
Alignment:
Q  49 acttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcac 148  Q
    ||||||| |||||||||  ||||||||||||||||||||||||||||| ||| |||||||  ||||||||| ||||| |  |  |  |||||||||||||    
T  1306439 acttaacgagcaagtttgagaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccacgaaatcgtgtcac 1306538  T
Q  149 gataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    ||| ||||| || ||||||||||||||||||||||||||||| ||||||||||    
T  1306539 gatgccaaattcatgtcacgatttctctgttcttccagaccataaatttgaag 1306591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 25637193 - 25637013
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaac-tagctctctgcc 131  Q
    |||||||||||  |||||||||| ||||||||||   |||||||||||||||||||  |||||||||| |||||    ||||||| | |||||||| ||     
T  25637193 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctctc-gca 25637095  T
Q  132 acttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
     || |||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||||    
T  25637094 cctcgaaatcgtgtcacgatgccacaatcgtgtcacgatttccctgttcttccagaccacaaatttaaagacaatctcaaca 25637013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 32475859 - 32476064
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    ||||||||| |||||||| ||| | |  ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  32475859 tgtcacgatatgcaacggtccccaagatgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcac 32475958  T
Q  101 aatttggcgtcctgcaaac-tagctctctgcc-acttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttg 198  Q
     |||| || | | |  ||| | |||| |||||  | ||  |||||||||||||  | |||||||| ||||||| ||||||||| ||| ||||||||||||    
T  32475959 gattttgctttcagagaacttggctcactgcctccctg--atcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttg 32476056  T
Q  199 aagtcaat 206  Q
    ||| ||||    
T  32476057 aagccaat 32476064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 32480717 - 32480922
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    ||||||||| |||||||| ||| | |  ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  32480717 tgtcacgatatgcaacggtccccaagatgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcac 32480816  T
Q  101 aatttggcgtcctgcaaac-tagctctctgcc-acttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttg 198  Q
     |||| || | | |  ||| | |||| |||||  | ||  |||||||||||||  | |||||||| ||||||| ||||||||| ||| ||||||||||||    
T  32480817 gattttgctttcagagaacttggctcactgcctccctg--atcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttg 32480914  T
Q  199 aagtcaat 206  Q
    ||| ||||    
T  32480915 aagccaat 32480922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 33 - 214
Target Start/End: Original strand, 4601147 - 4601329
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttccca-agatcgtgccacaatttggcgtcctgcaaac-tagctctctgc 130  Q
    |||||||||||  |||||||||| |||||||||||  ||||||||||||||||||| | |||||||||| |||||    ||||||| | |||||| | ||    
T  4601147 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacgatttgcacccctgcaaccctagctcacggc 4601246  T
Q  131 cacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaacac 214  Q
      |  ||||||||||| |||| ||||||||||||||||||||| ||||||||||| ||||||||||||||| |||| |||||||    
T  4601247 atcc-gaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaacac 4601329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 35 - 201
Target Start/End: Complemental strand, 800864 - 800698
Alignment:
Q  35 tccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgccact 134  Q
    |||||||||  || ||||||| |||||||||   ||||||||||||||||||||  |||||| ||| |||||||  || |||||| ||||| | ||  |     
T  800864 tccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccccgcaaaccagctcacggcatca 800765  T
Q  135 tgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
     |||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||| ||||    
T  800764 cgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaattcgaag 800698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 4598926 - 4599107
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttccca-agatcgtgccacaatttggcgtcctgcaaac-tagctctctgc 130  Q
    |||||||||||  |||||||||| |||||||||||  ||||||||||||||||||| | |||||||||| |||||    ||||||| | |||||| | ||    
T  4598926 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacgatttgcacccctgcaaccctagctcacggc 4599025  T
Q  131 cacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
      |  ||||||||||| |||| ||||||||||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  4599026 atcc-gaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 4599107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 3617111 - 3617034
Alignment:
Q  136 gaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  3617111 gaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 3617034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 49 - 201
Target Start/End: Original strand, 23200564 - 23200716
Alignment:
Q  49 acttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcac 148  Q
    ||||||| |||||||||   ||||||||||||||| | | | |||||| ||| |||||||  ||||||||| ||||| | ||  |   ||||||||||||    
T  23200564 acttaacgagcaagtttgcaaatcgtgtcacgattcctccaaatcgtgtcacgatttggcaccctgcaaaccagctcacagcatcacaaaatcgtgtcac 23200663  T
Q  149 gataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    ||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23200664 gatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 23200716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 49 - 201
Target Start/End: Complemental strand, 26928245 - 26928093
Alignment:
Q  49 acttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcac 148  Q
    ||||||| |||||||||   ||||||||||||||| | |||||| ||| ||| |||||||  ||||||||| ||||| | ||      ||||||||||||    
T  26928245 acttaacgagcaagtttgaaaatcgtgtcacgattccacaagattgtgtcacgatttggcaccctgcaaaccagctcacggcataacaaaatcgtgtcac 26928146  T
Q  149 gataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    ||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  26928145 gatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 26928093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 49 - 201
Target Start/End: Complemental strand, 33386302 - 33386150
Alignment:
Q  49 acttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcac 148  Q
    |||||||||||||||||   ||||||||||||||| | ||| |||||| ||| |||||||  ||||||||| ||||| | ||  |   ||||||||||||    
T  33386302 acttaaccagcaagtttgaaaatcgtgtcacgattccacaaaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 33386203  T
Q  149 gataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    ||| ||||| |||||||||||||||||||||||| | ||||||||||||||||    
T  33386202 gatgccaaattcgtgtcacgatttctctgttctttcggaccacaaatttgaag 33386150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 49 - 201
Target Start/End: Original strand, 23198365 - 23198517
Alignment:
Q  49 acttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcac 148  Q
    ||||||| |||||||||   ||||||||||||||| | | | |||||| ||| |||||||  ||||||||| ||||| | ||  |   ||||||||||||    
T  23198365 acttaacgagcaagtttgcaaatcgtgtcacgattcctccaaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 23198464  T
Q  149 gataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    |||  |||| |||||||||||||||||||||||||||||||||||||||||||    
T  23198465 gatgtcaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 23198517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 49 - 201
Target Start/End: Original strand, 37726134 - 37726286
Alignment:
Q  49 acttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcac 148  Q
    ||||||||| |||||||   ||||||||||||||| | ||| |||||| ||| ||||| |  ||||||||| ||||| | ||  |   ||||||||||||    
T  37726134 acttaaccaacaagtttgaaaatcgtgtcacgattccacaaaatcgtgtcacgatttgacaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 37726233  T
Q  149 gataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  37726234 gatatcaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 37726286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 33 - 214
Target Start/End: Complemental strand, 10208959 - 10208777
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgattt-cccaagatcgtgccacaatttggcgtcctgcaaac-tagctctctgc 130  Q
    |||||||||||  |||| ||||| |||||||||||  ||||||||||||||| ||||| |||||||||| |||||    ||||||| | || ||| | ||    
T  10208959 agtccttatcaaggatatttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgccacgatttgcacccctgcaaccctaactcacggc 10208860  T
Q  131 cacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaacac 214  Q
      |  ||||||| ||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||| |||| |||||||    
T  10208859 atcc-gaaatcgcgtcacgataccaaaatcgtgtcatgatttccctgttcttccaaaccacaaatttgaagacaatctcaacac 10208777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 33 - 201
Target Start/End: Complemental strand, 10055986 - 10055817
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgattt-cccaagatcgtgccacaatttggcgtcctgcaaac-tagctctctgc 130  Q
    |||||||||||  |||||||||| |||||||||||  ||||||||||||||| ||||| |||||| ||| |||||    ||||||| | || ||| | ||    
T  10055986 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcacggc 10055887  T
Q  131 cacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
      |  ||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  10055886 atcc-gaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10055817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 33 - 201
Target Start/End: Complemental strand, 10058208 - 10058039
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgattt-cccaagatcgtgccacaatttggcgtcctgcaaac-tagctctctgc 130  Q
    |||||||||||  |||||||||| |||||||||||  ||||||||||||||| ||||| |||||| ||| |||||    ||||||| | || ||| | ||    
T  10058208 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcacggc 10058109  T
Q  131 cacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
      |  ||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  10058108 atcc-gaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10058039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 33 - 201
Target Start/End: Complemental strand, 10060430 - 10060261
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgattt-cccaagatcgtgccacaatttggcgtcctgcaaac-tagctctctgc 130  Q
    |||||||||||  |||||||||| |||||||||||  ||||||||||||||| ||||| |||||| ||| |||||    ||||||| | || ||| | ||    
T  10060430 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcacggc 10060331  T
Q  131 cacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
      |  ||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  10060330 atcc-gaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10060261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 33 - 201
Target Start/End: Complemental strand, 10062652 - 10062483
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgattt-cccaagatcgtgccacaatttggcgtcctgcaaac-tagctctctgc 130  Q
    |||||||||||  |||||||||| |||||||||||  ||||||||||||||| ||||| |||||| ||| |||||    ||||||| | || ||| | ||    
T  10062652 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcacggc 10062553  T
Q  131 cacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
      |  ||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  10062552 atcc-gaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10062483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 33 - 201
Target Start/End: Complemental strand, 10064874 - 10064705
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgattt-cccaagatcgtgccacaatttggcgtcctgcaaac-tagctctctgc 130  Q
    |||||||||||  |||||||||| |||||||||||  ||||||||||||||| ||||| |||||| ||| |||||    ||||||| | || ||| | ||    
T  10064874 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcacggc 10064775  T
Q  131 cacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
      |  ||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  10064774 atcc-gaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10064705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 33 - 201
Target Start/End: Complemental strand, 10067096 - 10066927
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgattt-cccaagatcgtgccacaatttggcgtcctgcaaac-tagctctctgc 130  Q
    |||||||||||  |||||||||| |||||||||||  ||||||||||||||| ||||| |||||| ||| |||||    ||||||| | || ||| | ||    
T  10067096 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcacggc 10066997  T
Q  131 cacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
      |  ||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  10066996 atcc-gaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10066927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 10211159 - 10210978
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgattt-cccaagatcgtgccacaatttggcgtcctgcaaac-tagctctctgc 130  Q
    |||||||||||  |||||||||| |||||||||||  ||||||||| ||||| ||||| |||||||||| |||||    ||||||| | || ||| | ||    
T  10211159 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcatgattttcccaaaatcgtgccacgatttgcacccctgcaaccctaactcacggc 10211060  T
Q  131 cacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
      | | |||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||| |||| ||||||    
T  10211059 atcct-aaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttaaagacaatctcaaca 10210978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 91 - 201
Target Start/End: Original strand, 7782589 - 7782699
Alignment:
Q  91 atcgtgccacaatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagacca 190  Q
    |||||| ||| |||||||  ||||||||| ||||| | ||  |  |||||||||||||||| ||||| ||||||||||||||| ||||||||| ||||||    
T  7782589 atcgtgtcacgatttggcaccctgcaaaccagctcaccgcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttctagacca 7782688  T
Q  191 caaatttgaag 201  Q
    |||||||||||    
T  7782689 caaatttgaag 7782699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 49 - 201
Target Start/End: Complemental strand, 37408200 - 37408049
Alignment:
Q  49 acttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgccacttgaaa-tcgtgtca 147  Q
    ||||||||| |||||||   |||||||||||||||| |  | |||||||||| ||||| |  ||||||||| ||||| | || |||  ||| ||||||||    
T  37408200 acttaaccaacaagtttgaaaatcgtgtcacgatttacaca-atcgtgccacgatttgacaccctgcaaaccagctcacggc-actacaaaatcgtgtca 37408103  T
Q  148 cgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    |||| ||| |||||||||||||||||| |||||||||| |||||||||||||||    
T  37408102 cgatgccacaatcgtgtcacgatttctttgttcttccaaaccacaaatttgaag 37408049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 49 - 201
Target Start/End: Original strand, 27453416 - 27453568
Alignment:
Q  49 acttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcac 148  Q
    |||||||||||||||||   ||||||||||||||| | ||  ||| || ||| |||||||  ||| ||||| ||||| | ||  |   ||||||||||||    
T  27453416 acttaaccagcaagtttgaaaatcgtgtcacgattccacacaatcatgtcacgatttggcaccctacaaaccagctcacggcatcacaaaatcgtgtcac 27453515  T
Q  149 gataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    ||| ||||| ||||||||| ||||||||| |||| ||||||||||||||||||    
T  27453516 gatgccaaattcgtgtcacaatttctctgctctttcagaccacaaatttgaag 27453568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 6718345 - 6718288
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  6718345 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 6718288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 154 - 214
Target Start/End: Complemental strand, 27974493 - 27974432
Alignment:
Q  154 caaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtc-aatttcaacac 214  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||    
T  27974493 caaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaacac 27974432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 45282642 - 45282585
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  45282642 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 45282585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 8738593 - 8738541
Alignment:
Q  162 tgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaacac 214  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  8738593 tgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacac 8738541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 9090831 - 9090779
Alignment:
Q  162 tgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaacac 214  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  9090831 tgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacac 9090779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 21711768 - 21711820
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaattt 208  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  21711768 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattt 21711820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 27027273 - 27027325
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaattt 208  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  27027273 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagtctattt 27027325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 154 - 201
Target Start/End: Original strand, 32143868 - 32143915
Alignment:
Q  154 caaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  32143868 caaaatcgtgtcacgatttctctgttctttcagaccacaaatttgaag 32143915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 155 - 206
Target Start/End: Original strand, 36029658 - 36029709
Alignment:
Q  155 aaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaat 206  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  36029658 aaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 36029709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 30709316 - 30709266
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaat 206  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  30709316 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 30709266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 40734132 - 40734087
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  40734132 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 40734087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 156 - 208
Target Start/End: Complemental strand, 39032075 - 39032023
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaattt 208  Q
    |||||||||||||||||||||||||||||| || |||||||||||| ||||||    
T  39032075 aaatcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaattt 39032023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 154 - 205
Target Start/End: Complemental strand, 27986017 - 27985966
Alignment:
Q  154 caaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaa 205  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||| ||||    
T  27986017 caaaatcgtgtcacgatttctctgttattccaaaccacaaatttgaaatcaa 27985966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 33 - 151
Target Start/End: Complemental strand, 6718449 - 6718331
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  |||||||||| ||||||||||   |||||||||||||||||||  |||||| ||| |||| ||  ||||||| ||||||| | ||      
T  6718449 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgcaccctgcaacctagctcacggcac 6718350  T
Q  133 cttgaaatcgtgtcacgat 151  Q
    |  ||||||||||||||||    
T  6718349 cccgaaatcgtgtcacgat 6718331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 16264896 - 16264946
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaat 206  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  16264896 aaatcgtgtcacgatttcgctgttcttccaaaccacaaatttgaagccaat 16264946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 207
Target Start/End: Complemental strand, 1730959 - 1730915
Alignment:
Q  163 gtcacgatttctctgttcttccagaccacaaatttgaagtcaatt 207  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||    
T  1730959 gtcacgatttctctgttcttccaaaccacaaatttgaagccaatt 1730915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 27038608 - 27038660
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaattt 208  Q
    |||||||||||||||||||||||| ||||| |||||||| |||||| ||||||    
T  27038608 aaatcgtgtcacgatttctctgtttttccaaaccacaaacttgaagccaattt 27038660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 125
Target Start/End: Original strand, 32143782 - 32143858
Alignment:
Q  49 acttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctc 125  Q
    ||||||| |||||||||   ||||||||||||||| | |||||||||| ||| |||||||  |||||||||||||||    
T  32143782 acttaacgagcaagtttgaaaatcgtgtcacgattccacaagatcgtgtcacgatttggcaccctgcaaactagctc 32143858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 40592302 - 40592251
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatt 207  Q
    ||||| |||||||||||||| ||||||||| ||||||||||||||| |||||    
T  40592302 aaatcatgtcacgatttctccgttcttccaaaccacaaatttgaagccaatt 40592251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 35926057 - 35926106
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaat 206  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||| ||||    
T  35926057 aaatcgtgtcacgatttctctgttcttccaaacc-caaatttgaagccaat 35926106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 48438782 - 48438832
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaat 206  Q
    ||||||||||||||||||||||||||| || ||||||||||| ||| ||||    
T  48438782 aaatcgtgtcacgatttctctgttcttacaaaccacaaatttaaagccaat 48438832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 16498694 - 16498637
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    ||||| ||||||||||||||||||  |||| ||||||||||||||| |||| ||||||    
T  16498694 aaatcatgtcacgatttctctgtttctccaaaccacaaatttgaagccaatatcaaca 16498637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 40735063 - 40735018
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    ||||||||||||||||| ||||||| |||| |||||||||||||||    
T  40735063 aaatcgtgtcacgatttatctgttcatccaaaccacaaatttgaag 40735018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 24694706 - 24694655
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttcc-agaccacaaatttgaagtcaat 206  Q
    ||||||| ||||||||||||||||||||| | ||||||||||||||| ||||    
T  24694706 aaatcgtatcacgatttctctgttcttccaaaaccacaaatttgaagccaat 24694655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 40845220 - 40845266
Alignment:
Q  155 aaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    ||||||||||||||||||||||||||| ||| | || ||||||||||    
T  40845220 aaaatcgtgtcacgatttctctgttctcccaaaacataaatttgaag 40845266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 151
Target Start/End: Complemental strand, 45282746 - 45282628
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | |||||| ||| | || ||  ||||||| ||||||| | ||      
T  45282746 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaacctagctcacggcac 45282647  T
Q  133 cttgaaatcgtgtcacgat 151  Q
    |  ||||||||||||||||    
T  45282646 cccgaaatcgtgtcacgat 45282628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 185
Target Start/End: Original strand, 43404486 - 43404515
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttcca 185  Q
    ||||||||||||||||||||||||||||||    
T  43404486 aaatcgtgtcacgatttctctgttcttcca 43404515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 177
Target Start/End: Original strand, 9634816 - 9634856
Alignment:
Q  137 aaatcgtgtcacgataccaaaatcgtgtcacgatttctctg 177  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  9634816 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 9634856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 125
Target Start/End: Complemental strand, 27986103 - 27986027
Alignment:
Q  49 acttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctc 125  Q
    |||||||||||||||||   ||||||||||||||| | ||  |||||| ||| |||||||  ||||||||| |||||    
T  27986103 acttaaccagcaagtttgaaaatcgtgtcacgattccacacaatcgtgtcacgatttggcaccctgcaaaccagctc 27986027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 47923371 - 47923327
Alignment:
Q  162 tgtcacgatttctctgttcttccagaccacaaatttgaagtcaat 206  Q
    |||||||||||||||||| || || ||||||||||||||| ||||    
T  47923371 tgtcacgatttctctgttttttcaaaccacaaatttgaagccaat 47923327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 130; Significance: 3e-67; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 39445870 - 39446082
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||||| ||| |||  ||| ||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||    
T  39445870 tgtcacgatctgcaacggtccccaggttgaccagtccttatcagtgatacttaacgagcaagtttctggatcgtgtcatgatttcccaagatcgtgccac 39445969  T
Q  101 aatttggcgtcctgcaaac-tagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 199  Q
     |||||||||||||||||| | |||| | | ||  | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  39445970 gatttggcgtcctgcaaacttggctcac-ggcatctcaaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 39446068  T
Q  200 agtcaatttcaaca 213  Q
    || |||||||||||    
T  39446069 agccaatttcaaca 39446082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 44023589 - 44023377
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||||| ||| |||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44023589 tgtcacgatctgcaacggtccccaggttgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 44023490  T
Q  101 aatttggcgtcctgcaaac-tagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 199  Q
     |||| || ||| |||||| | |||| | | ||| |  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  44023489 gattttgcatccagcaaacttggctcac-ggcacctccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 44023391  T
Q  200 agtcaatttcaaca 213  Q
    || |||||||||||    
T  44023390 agccaatttcaaca 44023377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 1054726 - 1054514
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    ||||||||||||||||||  || |||  ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  1054726 tgtcacgatctgcaacggttcccaggttgaccagtccttatcagtgatacttaactagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 1054627  T
Q  101 aatttggcgtcctgcaaac-tagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 199  Q
     |||||||||||||||||| | |||| | | ||| |  |||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  1054626 gatttggcgtcctgcaaacttggctcac-ggcacctccaatcgtatcacgattccaaaatcgtgacacgatttctctgttcttccagaccacaaatttga 1054528  T
Q  200 agtcaatttcaaca 213  Q
    || |||||||||||    
T  1054527 agccaatttcaaca 1054514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 41390974 - 41391173
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||| ||| ||| |||  ||| ||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||    
T  41390974 tgtcacgatctgcagcggaccccaggttgaccagtccttatcagtgatacttaatgagcaagtttctgaatcatgtcacgatttcccaagatcgtgccac 41391073  T
Q  101 aatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 200  Q
     ||||||||||||||||||| |||| | | ||  | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41391074 gatttggcgtcctgcaaactggctcac-ggcatctcaaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 41391172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 25439611 - 25439399
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||| | ||| |||  ||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25439611 tgtcacgatctgcaacagtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaagatcgtgccac 25439512  T
Q  101 aatttggcgtcctgcaaac-tagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 199  Q
     |||| || |||||||||| | |||| | | ||  | |||||||||||||||  | |||||||||||||||| |||||||||||||||||||||||||||    
T  25439511 gattttgcatcctgcaaacttggctcac-ggcatctcaaatcgtgtcacgattaccaaatcgtgtcacgattgctctgttcttccagaccacaaatttga 25439413  T
Q  200 agtcaatttcaaca 213  Q
    || ||||| |||||    
T  25439412 agccaattccaaca 25439399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 25444804 - 25444592
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||||| ||| |||  ||| |||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  25444804 tgtcacgatctgcaacggtccctaggttgaccagtccttatcagagatacttaaccaacaagtttctggatcgtgtcacgatttcccaagatcgtgccac 25444705  T
Q  101 aatttggcgtcctgcaaac-tagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 199  Q
     |||| || |||| ||||| | |||| | | ||  | |||||||||||||||  | |||||||||||||||| |||||||||||||||||||||||||||    
T  25444704 gattttgcatcctacaaacttggctcac-ggcatctcaaatcgtgtcacgattaccaaatcgtgtcacgattgctctgttcttccagaccacaaatttga 25444606  T
Q  200 agtcaatttcaaca 213  Q
    || ||||| |||||    
T  25444605 agccaattccaaca 25444592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 33 - 201
Target Start/End: Original strand, 20622640 - 20622808
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  |||||||||| ||||||||||  ||||||||||||||||||||  |||||| ||| |||||||  |||||| |||||||| | ||      
T  20622640 agtccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcagactagctcacggcac 20622739  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    |  |||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  20622740 cacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 20622808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 33 - 151
Target Start/End: Complemental strand, 24793827 - 24793709
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||      
T  24793827 agtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcac 24793728  T
Q  133 cttgaaatcgtgtcacgat 151  Q
    || ||||||||||||||||    
T  24793727 ctcgaaatcgtgtcacgat 24793709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 49 - 201
Target Start/End: Complemental strand, 19361077 - 19360925
Alignment:
Q  49 acttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcac 148  Q
    ||||||| |||||||||   |||||||||||||||||||||||||||| ||| |||||||  ||||||||| ||||| | ||  |   ||||||||||||    
T  19361077 acttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 19360978  T
Q  149 gataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  19360977 gataccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaag 19360925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 41398629 - 41398753
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||| ||| ||| |||  ||| ||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  41398629 tgtcacgatctgcagcggaccccaggttgaccagtccttatcaatgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 41398728  T
Q  101 aatttggcgtcctgcaaactagctc 125  Q
     ||||||||||||||||||| ||||    
T  41398729 gatttggcgtcctgcaaactggctc 41398753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 51 - 205
Target Start/End: Complemental strand, 19365931 - 19365777
Alignment:
Q  51 ttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcacga 150  Q
    ||||| |||||||||   |||||||||||||||||||||||||||| ||| |||||||  ||||||||| ||||| | ||  |   ||||||||||||||    
T  19365931 ttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacga 19365832  T
Q  151 taccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaa 205  Q
    | ||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  19365831 tgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagtcaa 19365777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 44203398 - 44203218
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaac-tagctctctgcc 131  Q
    |||||||||||  |||||||||| |||||||||||| ||||||||||||||| || | |||||||||| |||||    ||||||| | |||||| | ||     
T  44203398 agtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctcacggc- 44203300  T
Q  132 acttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    || |  |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  44203299 acctccaatcgtgtcacgattccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 44203218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 9036183 - 9036003
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  |||||||||| ||||||||||   |||||||||||||||  ||| || ||| ||| | || ||  ||||||| ||||||| | ||      
T  9036183 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttaacaaaatagtgacacgaatttgcaccctgcaacctagctcacggcac 9036084  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    |  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  9036083 cccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 9036003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 33 - 125
Target Start/End: Complemental strand, 24787005 - 24786913
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctc 125  Q
    |||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  24787005 agtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctc 24786913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 43988161 - 43987954
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    ||||||||| |||||||| ||| | |  ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||    
T  43988161 tgtcacgatatgcaacggtccccaagttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttaccaagatcgtggcac 43988062  T
Q  101 aatttggcgtcctgcaaac-tagctctctgccact-tgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttg 198  Q
     |||| || ||| |||||| | |||| ||||| || ||  |||||||||||||  | |||||| | ||||||| ||||| ||| ||| ||||||||||||    
T  43988061 gattttgcttccagcaaacttggctcactgcctctctg--atcgtgtcacgattgccaaatcgcgacacgattcctctgctctcccaaaccacaaatttg 43987964  T
Q  199 aagtcaattt 208  Q
    ||| ||||||    
T  43987963 aagccaattt 43987954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 21053721 - 21053540
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagttt-ctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcc 131  Q
    |||||||||||  || ||||||| ||||||||| |  ||||||||||||||||||||  |||||| ||| |||||||  | ||||  ||||||| ||||     
T  21053721 agtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccttgcattctagctcactgca 21053622  T
Q  132 acttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
     |  |||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  21053621 ccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 21053540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 33 - 197
Target Start/End: Complemental strand, 51765171 - 51765007
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  || ||||||| |||||||||   ||||||||||||||| | |||||||||| ||| |||||||  ||||||||| ||||| | ||      
T  51765171 agtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcat 51765072  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaattt 197  Q
    |  ||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||    
T  51765071 cacgaaatcgtgtcacgatgtcaaattcgtgtcacgatttctctgttcttccagaccacaaattt 51765007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 33 - 201
Target Start/End: Complemental strand, 40282140 - 40281971
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagttt-ctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcc 131  Q
    |||||||||||  || ||||||| ||||||||| |  |||||||||||||||| |||  |||||| ||| |||||||  ||||||| ||||||| | ||     
T  40282140 agtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttaccacaatcgtgtcacgatttggcaccctgcaacctagctcacggca 40282041  T
Q  132 acttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
     |   ||||||||||||||| ||||| ||||||||||||||| || ||||||||||||||||||||||||    
T  40282040 ccactaaatcgtgtcacgatgccaaattcgtgtcacgatttccctattcttccagaccacaaatttgaag 40281971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 49 - 201
Target Start/End: Complemental strand, 9986950 - 9986798
Alignment:
Q  49 acttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcac 148  Q
    ||||||| |||||||||   ||||||||||||||||||||| |||||| ||| |||||||   ||||| || ||||| | ||  |  |||||||||| ||    
T  9986950 acttaacgagcaagtttgcaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcacactgcagaccagctcacggcaccacgaaatcgtgttac 9986851  T
Q  149 gataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    |||  |||| ||||||||||||||| |||||||||||||||||||||||||||    
T  9986850 gatgtcaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 9986798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 91 - 201
Target Start/End: Complemental strand, 24202374 - 24202264
Alignment:
Q  91 atcgtgccacaatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagacca 190  Q
    |||||| ||| |||||||  ||||||||| ||||| | ||  |  |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  24202374 atcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagacca 24202275  T
Q  191 caaatttgaag 201  Q
    |||||||||||    
T  24202274 caaatttgaag 24202264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 13604172 - 13604108
Alignment:
Q  137 aaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  13604172 aaatcgtgccacgataccacaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 13604108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 156 - 214
Target Start/End: Complemental strand, 24793723 - 24793665
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaacac 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  24793723 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacac 24793665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 13598967 - 13599018
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatt 207  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  13598967 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatt 13599018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 21536170 - 21536125
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  21536170 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 21536125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 41398764 - 41398809
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  41398764 aaatcgtgtcacgatttctctgttctttcagaccacaaatttgaag 41398809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 156 - 200
Target Start/End: Original strand, 37070334 - 37070378
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 200  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  37070334 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaa 37070378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 26644450 - 26644379
Alignment:
Q  137 aaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaattt 208  Q
    ||||||||| |||||  ||||||||| |||||||| ||||||||||||| ||||||||||| ||| ||||||    
T  26644450 aaatcgtgttacgatgacaaaatcgtatcacgattcctctgttcttccaaaccacaaatttaaagccaattt 26644379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 3282273 - 3282331
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtc-aatttcaaca 213  Q
    ||||||||||||||||| |||||||||||  ||||||||||||||| | ||||||||||    
T  3282273 aaatcgtgtcacgatttttctgttcttcctaaccacaaatttgaagccaaatttcaaca 3282331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 13659840 - 13659897
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    ||||| ||||||||||||||||||  |||| ||||||||||||||| |||| ||||||    
T  13659840 aaatcatgtcacgatttctctgtttctccaaaccacaaatttgaagccaatatcaaca 13659897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 16124238 - 16124197
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaattt 197  Q
    ||||||| |||||||||||||||||||||| |||||||||||    
T  16124238 aaatcgtatcacgatttctctgttcttccaaaccacaaattt 16124197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 193
Target Start/End: Original strand, 29652381 - 29652418
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaa 193  Q
    ||||||| |||||||||||||||||||||| |||||||    
T  29652381 aaatcgtatcacgatttctctgttcttccaaaccacaa 29652418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 118; Significance: 4e-60; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 733 - 945
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    ||||||||||||||||||  |||| |  ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  733 tgtcacgatctgcaacggaaccaaagttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 832  T
Q  101 aatttggcgtcctgcaaac-tagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 199  Q
     |||| || ||| |||||| | |||| | | ||| |  |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  833 gattttgcatccagcaaacttggctcac-ggcacctccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccataccacaaatttga 931  T
Q  200 agtcaatttcaaca 213  Q
    || |||||||||||    
T  932 agccaatttcaaca 945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 108; Significance: 4e-54; HSPs: 2)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 12 - 151
Target Start/End: Original strand, 8091 - 8230
Alignment:
Q  12 gcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtc 111  Q
    ||||||| |||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  8091 gcaacggacccaaggttgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtc 8190  T
Q  112 ctgcaaactagctctctgccacttgaaatcgtgtcacgat 151  Q
    |||||||||||||| | |||||||||||||||||||||||    
T  8191 ctgcaaactagctcacggccacttgaaatcgtgtcacgat 8230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 156 - 214
Target Start/End: Original strand, 8216 - 8274
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaacac 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  8216 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacac 8274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 34 - 200
Target Start/End: Complemental strand, 22119 - 21953
Alignment:
Q  34 gtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgccac 133  Q
    |||||||||||||||||||||| |||||||||   |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| | ||  |    
T  22119 gtccttatcagtgatacttaacgagcaagttttacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaactagctcacggcacc 22020  T
Q  134 ttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 200  Q
    | |||||||||||||||| ||||| || |||| ||||||||||||||||||||||||||||||||||    
T  22019 tcgaaatcgtgtcacgatgccaaattcatgtcccgatttctctgttcttccagaccacaaatttgaa 21953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 98; Significance: 4e-48; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 1951 - 1739
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||||| |||||||  ||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1951 tgtcacgatctgcaacggtcccaaggttgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 1852  T
Q  101 aatttggcgtcctgcaaac-tagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 199  Q
     |||| || ||| |||||| | |||| ||||| |     |||||||||||||  | |||||||| ||||||| ||||||||||||| ||||| |||||||    
T  1851 gattttgcttccagcaaacttggctcactgcctc-cccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttcttccaaaccactaatttga 1753  T
Q  200 agtcaatttcaaca 213  Q
    |||||||| |||||    
T  1752 agtcaattccaaca 1739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 98; Significance: 4e-48; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 148656 - 148444
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||||| |||||||  ||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  148656 tgtcacgatctgcaacggtcccaaggttgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 148557  T
Q  101 aatttggcgtcctgcaaac-tagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 199  Q
     |||| || ||| |||||| | |||| ||||| |     |||||||||||||  | |||||||| ||||||| ||||||||||||| ||||| |||||||    
T  148556 gattttgcttccagcaaacttggctcactgcctc-cccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttcttccaaaccactaatttga 148458  T
Q  200 agtcaatttcaaca 213  Q
    |||||||| |||||    
T  148457 agtcaattccaaca 148444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 176662 - 176457
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||||| ||||| |  ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  176662 tgtcacgatctgcaacggacccaaagttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 176563  T
Q  101 aatttggcgtcctgcaaac-tagctctctgcc-acttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttg 198  Q
     |||| || ||| |||||| |||||| |||||  | ||  ||||||||||||   |||||||||| ||||||| ||||||||| ||| ||||| ||||||    
T  176562 gattttgcttccagcaaacttagctcactgcctccctg--atcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttg 176465  T
Q  199 aagtcaat 206  Q
    ||||||||    
T  176464 aagtcaat 176457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 96; Significance: 6e-47; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 13996 - 13784
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    |||||||||||||||||| ||| | |  ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13996 tgtcacgatctgcaacggtccccaagttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 13897  T
Q  101 aatttggcgtcctgcaaac-tagctctctgcc-acttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttg 198  Q
     |||| || ||| |||||| |||||| |||||  | ||  ||||||||||||   |||||||||| ||||||| ||||||||| ||| ||||| ||||||    
T  13896 gattttgcttccagcaaacttagctcactgcctccctg--atcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttg 13799  T
Q  199 aagtcaatttcaaca 213  Q
    ||||||||| |||||    
T  13798 aagtcaattccaaca 13784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 18876 - 18669
Alignment:
Q  1 tgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccac 100  Q
    ||||||||| |||||||| ||| |||  ||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  18876 tgtcacgatttgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtggcac 18777  T
Q  101 aatttggcgtcctgcaaac-tagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 199  Q
     |||| || ||| |||||| |||||| ||||| | |   |||||||||||||  | |||||| | ||||||| ||||||||| ||| |||||||||||||    
T  18776 gattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttctcccaaaccacaaatttga 18678  T
Q  200 agtcaattt 208  Q
    || ||||||    
T  18677 agccaattt 18669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 35 - 201
Target Start/End: Complemental strand, 17610 - 17444
Alignment:
Q  35 tccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgccact 134  Q
    |||||||||  |||||||||| |||||||||   |||| ||||||||||||||||||||||| ||| |||||||  ||||||||| ||||| | ||  |     
T  17610 tccttatcaaggatacttaacgagcaagtttgaaaatcatgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatca 17511  T
Q  135 tgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
     |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  17510 cgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 17444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 4130 - 4310
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaac-tagctctctgcc 131  Q
    |||||||||||  |||||||||| |||||||||||| |||||||||||||||||||  |||||||||| |||||    ||||||| | |||||| | ||     
T  4130 agtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctcacggc- 4228  T
Q  132 acttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    || | ||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  4229 acctaaaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 4310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 33 - 216
Target Start/End: Original strand, 3005 - 3188
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaac-tagctctctgcc 131  Q
    |||||||||||   ||||||||| |||||||||||| |||||||||||||||||||  |||||||||| |||||    ||||||| | |||||| | ||     
T  3005 agtccttatcaagaatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctcacggca 3104  T
Q  132 acttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaacacta 216  Q
     |  |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||    
T  3105 tcc-gaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacacta 3188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 81; Significance: 5e-38; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 33 - 201
Target Start/End: Original strand, 11573 - 11740
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  || ||||||| |||||||||   ||||||||||||||||||||| |||||| ||| |||||||  ||||||||| ||||| | ||      
T  11573 agtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaa-atcgtgtcacgatttggcaccctgcaaaccagctcacggcat 11671  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    | ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  11672 catgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaattttgaag 11740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 33 - 201
Target Start/End: Original strand, 9128 - 9295
Alignment:
Q  33 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgcca 132  Q
    |||||||||||  || ||||||| |||||||||   ||||||||||||||||||||| ||| || ||| |||||||  ||||||||| ||||| | ||      
T  9128 agtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaa-atcatgtcacgatttggcaccctgcaaaccagctcacggcat 9226  T
Q  133 cttgaaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    |  |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  9227 cacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 9295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1455 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 1784 - 1708
Alignment:
Q  138 aatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaacac 214  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1784 aatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaacac 1708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 69 - 177
Target Start/End: Complemental strand, 627 - 519
Alignment:
Q  69 aatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgccacttgaaatcgtgtcacgataccaaaatcgtgtcacg 168  Q
    ||||||||||||||| | |||||||||| ||| |||||||  ||||||||||||||| | ||  |  |||||||||||||||| ||||| ||||||||||    
T  627 aatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaactagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacg 528  T
Q  169 atttctctg 177  Q
    |||||||||    
T  527 atttctctg 519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 7988 - 7924
Alignment:
Q  137 aaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  7988 aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaag 7924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 53; Significance: 3e-21; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 132829 - 132765
Alignment:
Q  137 aaatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  132829 aaatcgtgccacgataccacaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 132765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 6252 - 6303
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatt 207  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  6252 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatt 6303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 3060 - 3111
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatt 207  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||| |||||    
T  3060 aaatcgtgtcatgatttctctgttcttccaaaccacaaatttgaagccaatt 3111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 149601 - 149658
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    ||||| ||||||||||||||||||  |||| ||||||||||||||| |||| ||||||    
T  149601 aaatcatgtcacgatttctctgtttctccaaaccacaaatttgaagccaatatcaaca 149658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 138 - 213
Target Start/End: Complemental strand, 5934 - 5859
Alignment:
Q  138 aatcgtgtcacgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaatttcaaca 213  Q
    |||||||||||||  ||||||||||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  5934 aatcgtgtcacgactccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 5859  T

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Target: scaffold0510 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 49 - 213
Target Start/End: Complemental strand, 1248 - 1083
Alignment:
Q  49 acttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgccacttgaaa-tcgtgtca 147  Q
    |||||||||||||||||   ||||||||||||||||| ||| ||||| |||| ||||| |  ||||||||| | ||| | |  | |  ||| ||||||||    
T  1248 acttaaccagcaagtttaaaaatcgtgtcacgatttcacaaaatcgtaccacgatttgacaccctgcaaaccaactcac-gatattacaaaatcgtgtca 1150  T
Q  148 cgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtc-aatttcaaca 213  Q
    |||| |||||||||||||||||||| ||||||||| || ||||||||||||||| | ||||||||||    
T  1149 cgatgccaaaatcgtgtcacgatttttctgttctttcaaaccacaaatttgaaggcaaatttcaaca 1083  T

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Target: scaffold0087 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 49 - 201
Target Start/End: Complemental strand, 43599 - 43447
Alignment:
Q  49 acttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacaatttggcgtcctgcaaactagctctctgccacttgaaa-tcgtgtca 147  Q
    |||||||||||||||||   |||| |||||||||||| ||| ||||| |||| ||||| |  |||| |||| ||||| | | || |  ||| ||||||||    
T  43599 acttaaccagcaagtttgaaaatcatgtcacgatttcacaaaatcgtaccacgatttgacaccctgtaaaccagctcac-gacattacaaaatcgtgtca 43501  T
Q  148 cgataccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    |||| ||| |||||||||||||||||||| |||||||| |||| ||||||||||    
T  43500 cgatgccacaatcgtgtcacgatttctctattcttccaaaccataaatttgaag 43447  T

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Target: scaffold0087; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 154 - 208
Target Start/End: Complemental strand, 36384 - 36330
Alignment:
Q  154 caaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaattt 208  Q
    ||||||||| ||| |||||||||||||||||| ||||||||||||||| ||||||    
T  36384 caaaatcgtatcatgatttctctgttcttccaaaccacaaatttgaagccaattt 36330  T

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Target: scaffold0098 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 154 - 201
Target Start/End: Original strand, 45744 - 45791
Alignment:
Q  154 caaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 201  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||    
T  45744 caaaattgtgtcacgatttctctgttcttccaaaccacaaatttgaag 45791  T

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Target: scaffold0036 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 86153 - 86204
Alignment:
Q  156 aaatcgtgtcacgatttctctgttcttccagaccac-aaatttgaagtcaat 206  Q
    ||||||||||||||||||||| |||||||| ||||| |||||||||| ||||    
T  86153 aaatcgtgtcacgatttctctattcttccaaaccacaaaatttgaagccaat 86204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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