View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6032_low_3 (Length: 253)
Name: NF6032_low_3
Description: NF6032
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6032_low_3 |
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Alignment Details
Target: chr4 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 50 - 239
Target Start/End: Complemental strand, 36670957 - 36670768
Alignment:
| Q |
50 |
acagaacataacaatgagtttcaacaacacattttcactttttagcctcttcttgaccattttatccctttggttttcattctccaatgcacaaaactta |
149 |
Q |
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| T |
36670957 |
acagaacataacaatgagtttcaacaacacattttcactttttagcctcttcttgaccattttatccctttggttttcattctccaatgcacaaaactta |
36670858 |
T |
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| Q |
150 |
cctcaagattttgtcgatgcccacaacacagctcgtgcacaagttggcgttgcaaacattacttgggacaatacagttgctacctatgct |
239 |
Q |
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| T |
36670857 |
cctcaagattttgtcgatgcccacaacacagctcgtgcacaagttggcgttgcaaacattacttgggacaacacagttgctacctatgct |
36670768 |
T |
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