View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6033_high_32 (Length: 253)
Name: NF6033_high_32
Description: NF6033
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6033_high_32 |
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Alignment Details
Target: chr2 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 18 - 250
Target Start/End: Original strand, 13591208 - 13591440
Alignment:
| Q |
18 |
catagtggaaaactggatcaaaacaacattcatcttcgagcgcgaagactacgaatggcggtcactcctcaccggcatcgcagtcgatcctagggcagac |
117 |
Q |
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| T |
13591208 |
catagtggaaaactggatcaaaacaacattcatcttcgagcgcgaagactacgaatggcggtcactcctcaccggcatcgcagtcgatcctagggcagac |
13591307 |
T |
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| Q |
118 |
actttgcaactctgcaccggtaaccggtgccttatattccaactaggtcatgcagattccataccccaaaacctccgtgatttccttctgaatcggcact |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
13591308 |
actttgcaactctgcaccggtaaccggtgccttatattccaactaggtcatgcagattccataccgcaaaacctccgtgatttccttctgaatcggcact |
13591407 |
T |
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| Q |
218 |
gcggattcattaggtttaagaaccctatgctac |
250 |
Q |
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||||||||||||||||||||||||| ||||||| |
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| T |
13591408 |
gcggattcattaggtttaagaaccccatgctac |
13591440 |
T |
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