View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6033_low_33 (Length: 252)

Name: NF6033_low_33
Description: NF6033
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6033_low_33
NF6033_low_33
[»] chr3 (37 HSPs)
chr3 (1-237)||(6233230-6233473)
chr3 (1-212)||(6241126-6241340)
chr3 (132-166)||(2128338-2128372)
chr3 (132-166)||(15304434-15304468)
chr3 (136-186)||(25195377-25195427)
chr3 (132-186)||(44284125-44284179)
chr3 (132-177)||(1395620-1395665)
chr3 (132-177)||(49586992-49587037)
chr3 (134-166)||(10101563-10101595)
chr3 (134-166)||(10212488-10212520)
chr3 (132-183)||(53457326-53457377)
chr3 (134-177)||(53736189-53736232)
chr3 (132-162)||(905061-905091)
chr3 (135-169)||(20267107-20267141)
chr3 (132-166)||(30956713-30956747)
chr3 (132-166)||(30972525-30972559)
chr3 (132-178)||(40122827-40122873)
chr3 (136-166)||(42808932-42808962)
chr3 (132-166)||(42809250-42809284)
chr3 (134-171)||(24235765-24235802)
chr3 (134-171)||(33882979-33883016)
chr3 (132-177)||(37689460-37689505)
chr3 (132-177)||(38462230-38462275)
chr3 (132-165)||(49465751-49465784)
chr3 (134-167)||(54775079-54775112)
chr3 (142-186)||(659890-659934)
chr3 (136-184)||(2606357-2606405)
chr3 (134-166)||(10357384-10357416)
chr3 (140-176)||(16272713-16272749)
chr3 (132-184)||(16790425-16790477)
chr3 (132-168)||(24887368-24887404)
chr3 (133-177)||(25183064-25183108)
chr3 (134-186)||(26478919-26478970)
chr3 (134-162)||(26990685-26990713)
chr3 (134-166)||(32095278-32095310)
chr3 (132-164)||(33883838-33883870)
chr3 (132-164)||(36445681-36445713)
[»] chr6 (21 HSPs)
chr6 (132-177)||(1402945-1402990)
chr6 (132-177)||(2027482-2027527)
chr6 (132-168)||(30865431-30865467)
chr6 (132-171)||(2735018-2735057)
chr6 (134-177)||(10749304-10749347)
chr6 (134-164)||(507171-507201)
chr6 (132-166)||(9093643-9093677)
chr6 (131-165)||(30537034-30537068)
chr6 (132-165)||(769088-769121)
chr6 (132-169)||(2514651-2514688)
chr6 (134-167)||(5328925-5328958)
chr6 (133-166)||(8349751-8349784)
chr6 (132-177)||(10452436-10452481)
chr6 (136-169)||(30784510-30784543)
chr6 (132-185)||(31583650-31583703)
chr6 (132-160)||(1810393-1810421)
chr6 (132-184)||(2205637-2205689)
chr6 (132-168)||(4420566-4420602)
chr6 (133-177)||(7354154-7354198)
chr6 (137-165)||(11340713-11340741)
chr6 (134-162)||(24836290-24836318)
[»] chr8 (26 HSPs)
chr8 (132-171)||(26215445-26215484)
chr8 (132-186)||(14949837-14949891)
chr8 (132-166)||(32976366-32976400)
chr8 (132-177)||(4558747-4558792)
chr8 (134-171)||(8799356-8799393)
chr8 (134-171)||(26820150-26820187)
chr8 (132-177)||(27728097-27728142)
chr8 (132-184)||(36643940-36643992)
chr8 (131-166)||(1112801-1112836)
chr8 (134-177)||(2699257-2699300)
chr8 (132-163)||(9956902-9956933)
chr8 (134-181)||(27119980-27120027)
chr8 (133-168)||(39392746-39392781)
chr8 (134-168)||(11119084-11119118)
chr8 (140-186)||(20672729-20672775)
chr8 (134-176)||(29699205-29699247)
chr8 (134-184)||(40280274-40280324)
chr8 (134-168)||(40728503-40728537)
chr8 (132-162)||(42597350-42597380)
chr8 (135-168)||(10437837-10437870)
chr8 (132-177)||(11056743-11056788)
chr8 (133-162)||(14482152-14482181)
chr8 (132-177)||(25867035-25867080)
chr8 (136-169)||(35453707-35453740)
chr8 (134-171)||(38561677-38561714)
chr8 (134-163)||(43908763-43908792)
[»] chr5 (30 HSPs)
chr5 (132-183)||(7096197-7096248)
chr5 (133-177)||(37063150-37063194)
chr5 (134-177)||(35135738-35135781)
chr5 (132-166)||(10363699-10363733)
chr5 (134-176)||(38766920-38766962)
chr5 (133-166)||(7853608-7853641)
chr5 (132-177)||(14295455-14295500)
chr5 (135-171)||(6593252-6593288)
chr5 (134-178)||(10537750-10537794)
chr5 (133-177)||(28586842-28586886)
chr5 (135-166)||(27106010-27106041)
chr5 (134-186)||(29116995-29117049)
chr5 (131-162)||(29590831-29590862)
chr5 (132-166)||(465903-465937)
chr5 (134-168)||(1943202-1943236)
chr5 (137-179)||(4948608-4948650)
chr5 (132-162)||(12407752-12407782)
chr5 (136-166)||(12595827-12595857)
chr5 (132-162)||(34690823-34690853)
chr5 (133-171)||(35960364-35960402)
chr5 (131-168)||(10280661-10280698)
chr5 (133-162)||(10303751-10303780)
chr5 (131-184)||(12242757-12242810)
chr5 (133-162)||(35095874-35095903)
chr5 (132-164)||(4014513-4014545)
chr5 (132-160)||(5563653-5563681)
chr5 (135-171)||(11040996-11041032)
chr5 (132-160)||(13224378-13224406)
chr5 (136-164)||(40048369-40048397)
chr5 (134-166)||(42583100-42583132)
[»] chr1 (40 HSPs)
chr1 (134-181)||(6976899-6976946)
chr1 (136-177)||(30815711-30815752)
chr1 (132-166)||(4549815-4549849)
chr1 (134-184)||(14737774-14737824)
chr1 (132-186)||(23373357-23373411)
chr1 (133-179)||(42351980-42352026)
chr1 (132-186)||(50319241-50319295)
chr1 (132-173)||(44251367-44251408)
chr1 (132-164)||(4700155-4700187)
chr1 (134-166)||(49557092-49557124)
chr1 (132-171)||(9507082-9507121)
chr1 (134-177)||(15360845-15360888)
chr1 (132-171)||(33339502-33339541)
chr1 (132-171)||(38578476-38578515)
chr1 (134-177)||(44936666-44936709)
chr1 (134-177)||(52286629-52286672)
chr1 (132-166)||(9572195-9572229)
chr1 (132-166)||(15687160-15687194)
chr1 (132-162)||(17631192-17631222)
chr1 (132-186)||(26293173-26293227)
chr1 (132-166)||(31517827-31517861)
chr1 (132-166)||(36070199-36070233)
chr1 (132-166)||(46252769-46252803)
chr1 (132-165)||(172665-172698)
chr1 (132-177)||(5756762-5756807)
chr1 (132-177)||(6074423-6074468)
chr1 (132-165)||(10280598-10280631)
chr1 (132-177)||(23895285-23895330)
chr1 (136-165)||(29128386-29128415)
chr1 (132-164)||(2194447-2194479)
chr1 (133-165)||(7028242-7028274)
chr1 (134-166)||(11211069-11211101)
chr1 (132-168)||(30259572-30259608)
chr1 (134-162)||(36641826-36641854)
chr1 (132-168)||(37842440-37842476)
chr1 (134-178)||(45234148-45234192)
chr1 (132-168)||(45999373-45999409)
chr1 (135-171)||(48064261-48064297)
chr1 (132-184)||(48748652-48748703)
chr1 (134-162)||(49517021-49517049)
[»] scaffold0590 (1 HSPs)
scaffold0590 (132-177)||(1150-1195)
[»] scaffold0275 (1 HSPs)
scaffold0275 (132-177)||(2780-2825)
[»] chr2 (20 HSPs)
chr2 (132-177)||(17952777-17952822)
chr2 (134-177)||(1939408-1939451)
chr2 (132-177)||(18962114-18962159)
chr2 (132-177)||(31740035-31740080)
chr2 (132-168)||(5133721-5133757)
chr2 (132-168)||(5998787-5998823)
chr2 (134-166)||(39567854-39567886)
chr2 (132-168)||(41407024-41407060)
chr2 (132-171)||(9878764-9878803)
chr2 (132-171)||(31461387-31461426)
chr2 (132-179)||(32098382-32098429)
chr2 (133-184)||(33061279-33061330)
chr2 (133-179)||(37033994-37034040)
chr2 (132-161)||(34054993-34055022)
chr2 (137-166)||(36114610-36114639)
chr2 (134-166)||(3673758-3673790)
chr2 (134-166)||(3932301-3932333)
chr2 (128-168)||(26857195-26857235)
chr2 (133-177)||(33192143-33192187)
chr2 (134-166)||(43199365-43199397)
[»] chr4 (27 HSPs)
chr4 (133-176)||(20936079-20936122)
chr4 (132-186)||(51044525-51044580)
chr4 (131-177)||(5219576-5219622)
chr4 (132-166)||(17884017-17884051)
chr4 (133-177)||(4071832-4071876)
chr4 (133-177)||(30338668-30338712)
chr4 (133-177)||(32724069-32724113)
chr4 (134-166)||(47800581-47800613)
chr4 (132-186)||(4191688-4191743)
chr4 (132-187)||(4691827-4691882)
chr4 (134-197)||(35743255-35743318)
chr4 (132-171)||(47970267-47970306)
chr4 (132-166)||(3155552-3155586)
chr4 (132-162)||(6364098-6364128)
chr4 (134-186)||(21043280-21043333)
chr4 (133-166)||(21683566-21683599)
chr4 (133-162)||(24929443-24929472)
chr4 (134-171)||(27623586-27623623)
chr4 (136-177)||(36734846-36734887)
chr4 (132-168)||(2702989-2703025)
chr4 (132-184)||(6853196-6853248)
chr4 (141-177)||(6978785-6978821)
chr4 (135-171)||(11785234-11785270)
chr4 (132-176)||(24160939-24160983)
chr4 (134-162)||(30024651-30024679)
chr4 (133-177)||(49085939-49085983)
chr4 (133-177)||(54325113-54325157)
[»] chr7 (24 HSPs)
chr7 (132-166)||(43152989-43153023)
chr7 (132-177)||(40689062-40689107)
chr7 (131-162)||(5373173-5373204)
chr7 (134-177)||(6630551-6630594)
chr7 (132-183)||(7244651-7244702)
chr7 (132-171)||(47004036-47004075)
chr7 (133-167)||(2999141-2999175)
chr7 (132-162)||(28178918-28178948)
chr7 (132-186)||(35808971-35809025)
chr7 (132-162)||(42656464-42656494)
chr7 (132-185)||(3241390-3241443)
chr7 (132-177)||(5006585-5006630)
chr7 (133-166)||(15328556-15328589)
chr7 (134-171)||(22355855-22355892)
chr7 (133-161)||(2727452-2727480)
chr7 (132-168)||(2894766-2894802)
chr7 (135-171)||(18749892-18749928)
chr7 (134-166)||(21853203-21853235)
chr7 (132-160)||(24973893-24973921)
chr7 (132-184)||(30160959-30161011)
chr7 (132-168)||(31341143-31341179)
chr7 (134-166)||(34083612-34083644)
chr7 (134-162)||(39591558-39591586)
chr7 (132-168)||(43328198-43328234)
[»] scaffold0549 (2 HSPs)
scaffold0549 (137-165)||(1812-1840)
scaffold0549 (137-165)||(3902-3930)


Alignment Details
Target: chr3 (Bit Score: 169; Significance: 1e-90; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 6233473 - 6233230
Alignment:
Q  1 tctgtctttcttttcaggcatttggaaaataaattttt-gaccaaagtttgatagacaaagtctctctttcgttaatgaggttttgtttggaagaataat 99  Q
    |||||||||||||||||||| || ||||| |||||||| || ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  6233473 tctgtctttcttttcaggcacttagaaaacaaattttttgatcaaagtttgatattcaaagtctctctttcgttaatgaggttttgtttggaagaataat 6233374  T
Q  100 taagtg------ttgcataaattttcatacaaatgcttgctatttctataacaaaagataaaataaagttaaactattgtcataagctatcctttagagt 193  Q
    ||||||      ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6233373 taagtgcacttattgcataaattttcatacaaatgcttgctatttctttaacaaaagataaaataaagttaaactattgtcataagctatcctttagagt 6233274  T
Q  194 ttatcaataagttgaaaacttcaggagatatcataagatgtttt 237  Q
    | ||||||||||||||||||||| || || ||||||||||||||    
T  6233273 taatcaataagttgaaaacttcaagacatgtcataagatgtttt 6233230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 6241340 - 6241126
Alignment:
Q  1 tctgtctttcttttcaggcatttggaaaataaatttttgaccaaagtttgatagacaaagtctctctttcgttaatgaggttttgtttggaagaataatt 100  Q
    ||||||||||||||||||||||| ||||| | ||||||||||||||||||||| ||||||||||||||||  |||| ||||||||||||||| ||||| |    
T  6241340 tctgtctttcttttcaggcatttagaaaacatatttttgaccaaagtttgatatacaaagtctctctttc-ataatcaggttttgtttggaaaaataact 6241242  T
Q  101 aagtgtt----gcataaat-tttcatacaaatgcttgctatttctataacaaaagataaaataaagttaaactattgtcataagctatcctttagagttt 195  Q
    ||||| |    |||||||| |||||||||| |||||||| ||||||||||||||| ||||||||||| |||||||| |||||||| || |||||||| ||    
T  6241241 aagtgcttaaagcataaatgtttcatacaagtgcttgctgtttctataacaaaagttaaaataaagtcaaactattttcataagcaat-ctttagagctt 6241143  T
Q  196 atcaataagttgaaaac 212  Q
    ||| |||||||||||||    
T  6241142 atcgataagttgaaaac 6241126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 166
Target Start/End: Complemental strand, 2128372 - 2128338
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaa 166  Q
    |||||||||||||||||||||||||||||||||||    
T  2128372 gctatttctataacaaaagataaaataaagttaaa 2128338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 166
Target Start/End: Complemental strand, 15304468 - 15304434
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaa 166  Q
    |||||||||||||||||||||||||||||||||||    
T  15304468 gctatttctataacaaaagataaaataaagttaaa 15304434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 186
Target Start/End: Original strand, 25195377 - 25195427
Alignment:
Q  136 tttctataacaaaagataaaataaagttaaactattgtcataagctatcct 186  Q
    ||||||||||||||||||||||||||| ||| |||| ||||| ||||||||    
T  25195377 tttctataacaaaagataaaataaagtcaaattattttcatatgctatcct 25195427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 186
Target Start/End: Complemental strand, 44284179 - 44284125
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcataagctatcct 186  Q
    |||||||||||||||||| |||||| ||||| ||||| || ||||||||||||||    
T  44284179 gctatttctataacaaaaaataaaacaaagtcaaactgttttcataagctatcct 44284125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 1395620 - 1395665
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    ||||||||||||||||||||||||||||||| ||| |||| |||||    
T  1395620 gctatttctataacaaaagataaaataaagtcaaattattttcata 1395665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 49587037 - 49586992
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    ||||||||||||||||||||||||||||||| ||||| || |||||    
T  49587037 gctatttctataacaaaagataaaataaagtcaaactgttttcata 49586992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 10101595 - 10101563
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaa 166  Q
    |||||||||||||||||||||||||||||||||    
T  10101595 tatttctataacaaaagataaaataaagttaaa 10101563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 10212520 - 10212488
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaa 166  Q
    |||||||||||||||||||||||||||||||||    
T  10212520 tatttctataacaaaagataaaataaagttaaa 10212488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 53457326 - 53457377
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcataagctat 183  Q
    |||| ||| |||||||||||||||||||||| |||||||| |||||| ||||    
T  53457326 gctacttcgataacaaaagataaaataaagtcaaactattttcataacctat 53457377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 177
Target Start/End: Complemental strand, 53736232 - 53736189
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    |||||||||||||||||||||||||| || |||||||| |||||    
T  53736232 tatttctataacaaaagataaaataatgtcaaactattttcata 53736189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 162
Target Start/End: Complemental strand, 905091 - 905061
Alignment:
Q  132 gctatttctataacaaaagataaaataaagt 162  Q
    |||||||||||||||||||||||||||||||    
T  905091 gctatttctataacaaaagataaaataaagt 905061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 169
Target Start/End: Original strand, 20267107 - 20267141
Alignment:
Q  135 atttctataacaaaagataaaataaagttaaacta 169  Q
    |||||||||||||||||||||||||||| ||||||    
T  20267107 atttctataacaaaagataaaataaagtcaaacta 20267141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 166
Target Start/End: Complemental strand, 30956747 - 30956713
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaa 166  Q
    |||||||||||| ||||||||||||||||||||||    
T  30956747 gctatttctatagcaaaagataaaataaagttaaa 30956713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 166
Target Start/End: Complemental strand, 30972559 - 30972525
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaa 166  Q
    |||||||||||| ||||||||||||||||||||||    
T  30972559 gctatttctatagcaaaagataaaataaagttaaa 30972525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 40122873 - 40122827
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcataa 178  Q
    |||||||| |||||||||||||||||||||| ||||| || ||||||    
T  40122873 gctatttcaataacaaaagataaaataaagtcaaactgttttcataa 40122827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 166
Target Start/End: Original strand, 42808932 - 42808962
Alignment:
Q  136 tttctataacaaaagataaaataaagttaaa 166  Q
    |||||||||||||||||||||||||||||||    
T  42808932 tttctataacaaaagataaaataaagttaaa 42808962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 166
Target Start/End: Original strand, 42809250 - 42809284
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaa 166  Q
    ||||||||||||||||||||||||||| |||||||    
T  42809250 gctatttctataacaaaagataaaatatagttaaa 42809284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 171
Target Start/End: Complemental strand, 24235802 - 24235765
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaactatt 171  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  24235802 tatttctataacaaaagataatataaagtcaaactatt 24235765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 171
Target Start/End: Original strand, 33882979 - 33883016
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaactatt 171  Q
    ||||||||||||||||||||||||||||| ||| ||||    
T  33882979 tatttctataacaaaagataaaataaagtgaaattatt 33883016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 37689505 - 37689460
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    ||||||| |||||||||||||||| |||||||||| |||| |||||    
T  37689505 gctatttttataacaaaagataaagtaaagttaaattattttcata 37689460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 38462230 - 38462275
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    |||||||||||| |||||||||||||||||| ||||| || |||||    
T  38462230 gctatttctataccaaaagataaaataaagtcaaactgttttcata 38462275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 165
Target Start/End: Complemental strand, 49465784 - 49465751
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaa 165  Q
    ||||||| ||||||||||||||||||||||||||    
T  49465784 gctatttttataacaaaagataaaataaagttaa 49465751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 167
Target Start/End: Original strand, 54775079 - 54775112
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaac 167  Q
    ||||||||||||||||||||||||||||| ||||    
T  54775079 tatttctataacaaaagataaaataaagtcaaac 54775112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 659934 - 659890
Alignment:
Q  142 taacaaaagataaaataaagttaaactattgtcataagctatcct 186  Q
    ||||||||||||||||||||| |||||||| | ||||| ||||||    
T  659934 taacaaaagataaaataaagtcaaactatttttataagatatcct 659890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 2606405 - 2606357
Alignment:
Q  136 tttctataacaaaagataaaataaagttaaactattgtcataagctatc 184  Q
    |||||||||||||| |||||||||||| ||| ||||  |||||||||||    
T  2606405 tttctataacaaaatataaaataaagtcaaaatatttgcataagctatc 2606357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 10357384 - 10357416
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaa 166  Q
    |||||||||||||||||||||||||| ||||||    
T  10357384 tatttctataacaaaagataaaataatgttaaa 10357416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 176
Target Start/End: Original strand, 16272713 - 16272749
Alignment:
Q  140 tataacaaaagataaaataaagttaaactattgtcat 176  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  16272713 tataacaaaaaataaaataaagttaagctattgtcat 16272749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 16790477 - 16790425
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcataagctatc 184  Q
    ||||||| |||||||| |||||||||||| | ||| |||| ||||||||||||    
T  16790477 gctatttttataacaacagataaaataaaatcaaattattttcataagctatc 16790425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 168
Target Start/End: Complemental strand, 24887404 - 24887368
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaact 168  Q
    |||||||||||||||| |||||||||||||| |||||    
T  24887404 gctatttctataacaatagataaaataaagtcaaact 24887368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 25183108 - 25183064
Alignment:
Q  133 ctatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    |||||| ||||||||||||| |||||||||||| ||||| |||||    
T  25183108 ctatttttataacaaaagattaaataaagttaagctattttcata 25183064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 26478919 - 26478970
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaactattgtcataagctatcct 186  Q
    |||||||| |||||||||||||| || |||||| |||| ||||||||||||||    
T  26478919 tatttctacaacaaaagataaaacaa-gttaaattattttcataagctatcct 26478970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 162
Target Start/End: Original strand, 26990685 - 26990713
Alignment:
Q  134 tatttctataacaaaagataaaataaagt 162  Q
    |||||||||||||||||||||||||||||    
T  26990685 tatttctataacaaaagataaaataaagt 26990713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 32095310 - 32095278
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaa 166  Q
    |||||||||||||||||||||||| ||||||||    
T  32095310 tatttctataacaaaagataaaattaagttaaa 32095278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 33883870 - 33883838
Alignment:
Q  132 gctatttctataacaaaagataaaataaagtta 164  Q
    ||||||||||||||| |||||||||||||||||    
T  33883870 gctatttctataacataagataaaataaagtta 33883838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 36445681 - 36445713
Alignment:
Q  132 gctatttctataacaaaagataaaataaagtta 164  Q
    |||||||||||||||||||| ||||||||||||    
T  36445681 gctatttctataacaaaagagaaaataaagtta 36445713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 1402945 - 1402990
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  1402945 gctatttctataacaaaagataaaataaagttaaactattttcata 1402990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 2027527 - 2027482
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    ||||||| ||||||||||||||||||||||| |||||||| |||||    
T  2027527 gctatttttataacaaaagataaaataaagtcaaactattttcata 2027482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 168
Target Start/End: Original strand, 30865431 - 30865467
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaact 168  Q
    ||||||||||||||||||||||||||||||| |||||    
T  30865431 gctatttctataacaaaagataaaataaagtcaaact 30865467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 171
Target Start/End: Original strand, 2735018 - 2735057
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactatt 171  Q
    ||||| ||||||||||||||||||||||||||||| ||||    
T  2735018 gctatgtctataacaaaagataaaataaagttaaattatt 2735057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 177
Target Start/End: Complemental strand, 10749347 - 10749304
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    ||||||||||| ||||||||||||||||||||| |||| |||||    
T  10749347 tatttctataataaaagataaaataaagttaaattattttcata 10749304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 164
Target Start/End: Original strand, 507171 - 507201
Alignment:
Q  134 tatttctataacaaaagataaaataaagtta 164  Q
    |||||||||||||||||||||||||||||||    
T  507171 tatttctataacaaaagataaaataaagtta 507201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 166
Target Start/End: Complemental strand, 9093677 - 9093643
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaa 166  Q
    |||||||||||| ||||||||||||||||||||||    
T  9093677 gctatttctatatcaaaagataaaataaagttaaa 9093643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 165
Target Start/End: Complemental strand, 30537068 - 30537034
Alignment:
Q  131 tgctatttctataacaaaagataaaataaagttaa 165  Q
    |||||||||||||||||||||||||||||| ||||    
T  30537068 tgctatttctataacaaaagataaaataaaattaa 30537034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 165
Target Start/End: Original strand, 769088 - 769121
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaa 165  Q
    ||||||||||||||||||| ||||||||||||||    
T  769088 gctatttctataacaaaagctaaaataaagttaa 769121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 2514651 - 2514688
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaacta 169  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  2514651 gctatttctataataaaagataaaataaagtcaaacta 2514688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 167
Target Start/End: Original strand, 5328925 - 5328958
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaac 167  Q
    ||||||||||||||||||||||||||||| ||||    
T  5328925 tatttctataacaaaagataaaataaagtcaaac 5328958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 166
Target Start/End: Complemental strand, 8349784 - 8349751
Alignment:
Q  133 ctatttctataacaaaagataaaataaagttaaa 166  Q
    |||||||| |||||||||||||||||||||||||    
T  8349784 ctatttctctaacaaaagataaaataaagttaaa 8349751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 10452481 - 10452436
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    |||||||||||||||||| |||||||||| | |||||||| |||||    
T  10452481 gctatttctataacaaaatataaaataaaatcaaactattttcata 10452436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 30784510 - 30784543
Alignment:
Q  136 tttctataacaaaagataaaataaagttaaacta 169  Q
    ||||||||||||||||||||||||||| ||||||    
T  30784510 tttctataacaaaagataaaataaagtcaaacta 30784543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 31583650 - 31583703
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcataagctatcc 185  Q
    |||||||||||||||| ||||||||| |||| ||| | || |||||||||||||    
T  31583650 gctatttctataacaagagataaaatgaagtcaaattgttttcataagctatcc 31583703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 160
Target Start/End: Complemental strand, 1810421 - 1810393
Alignment:
Q  132 gctatttctataacaaaagataaaataaa 160  Q
    |||||||||||||||||||||||||||||    
T  1810421 gctatttctataacaaaagataaaataaa 1810393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 2205689 - 2205637
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcataagctatc 184  Q
    |||||||||| |||||||||||||| ||||| ||| | || ||||||||||||    
T  2205689 gctatttctaaaacaaaagataaaacaaagtcaaattgttttcataagctatc 2205637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 168
Target Start/End: Original strand, 4420566 - 4420602
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaact 168  Q
    |||| |||||||||||||||||||||||||| |||||    
T  4420566 gctacttctataacaaaagataaaataaagtcaaact 4420602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 7354154 - 7354198
Alignment:
Q  133 ctatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    |||||||||||||||||||||||||||| |  ||||||| |||||    
T  7354154 ctatttctataacaaaagataaaataaaatcgaactattttcata 7354198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 165
Target Start/End: Complemental strand, 11340741 - 11340713
Alignment:
Q  137 ttctataacaaaagataaaataaagttaa 165  Q
    |||||||||||||||||||||||||||||    
T  11340741 ttctataacaaaagataaaataaagttaa 11340713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 162
Target Start/End: Complemental strand, 24836318 - 24836290
Alignment:
Q  134 tatttctataacaaaagataaaataaagt 162  Q
    |||||||||||||||||||||||||||||    
T  24836318 tatttctataacaaaagataaaataaagt 24836290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 171
Target Start/End: Original strand, 26215445 - 26215484
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactatt 171  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  26215445 gctatttctataacaaaagataaaataaagttaaactatt 26215484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 186
Target Start/End: Original strand, 14949837 - 14949891
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcataagctatcct 186  Q
    |||| |||||||||||||||||||||| ||| ||||| || ||||||||||||||    
T  14949837 gctacttctataacaaaagataaaatagagtcaaactcttttcataagctatcct 14949891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 166
Target Start/End: Original strand, 32976366 - 32976400
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaa 166  Q
    |||||||||||||||||||||||||||||||||||    
T  32976366 gctatttctataacaaaagataaaataaagttaaa 32976400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 4558747 - 4558792
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    ||||||||||||| ||||||||||||||||||||| |||| |||||    
T  4558747 gctatttctataataaaagataaaataaagttaaattattttcata 4558792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 171
Target Start/End: Original strand, 8799356 - 8799393
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaactatt 171  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  8799356 tatttctataacaaaagataaaataaagtcaaactatt 8799393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 171
Target Start/End: Original strand, 26820150 - 26820187
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaactatt 171  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  26820150 tatttctataacaaaagataaaataaagtcaaactatt 26820187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 27728142 - 27728097
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    ||||||||||||| ||||||||||||||||| |||||||| |||||    
T  27728142 gctatttctataaaaaaagataaaataaagtcaaactattttcata 27728097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 36643992 - 36643940
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcataagctatc 184  Q
    ||||||||||||| |||||||| | |||||| |||||||| ||||||||||||    
T  36643992 gctatttctataataaaagatacagtaaagtcaaactattttcataagctatc 36643940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 166
Target Start/End: Original strand, 1112801 - 1112836
Alignment:
Q  131 tgctatttctataacaaaagataaaataaagttaaa 166  Q
    ||||||||||||||||||||||||||||| ||||||    
T  1112801 tgctatttctataacaaaagataaaataaggttaaa 1112836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 2699257 - 2699300
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    |||||||| ||||||| ||||||||||||||||||||| |||||    
T  2699257 tatttctacaacaaaatataaaataaagttaaactattttcata 2699300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 163
Target Start/End: Complemental strand, 9956933 - 9956902
Alignment:
Q  132 gctatttctataacaaaagataaaataaagtt 163  Q
    ||||||||||||||||||||||||||||||||    
T  9956933 gctatttctataacaaaagataaaataaagtt 9956902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 27120027 - 27119980
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaactattgtcataagct 181  Q
    ||||||||||||||| ||||| ||||||||||||| || |||||||||    
T  27120027 tatttctataacaaacgataacataaagttaaactgttttcataagct 27119980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 168
Target Start/End: Complemental strand, 39392781 - 39392746
Alignment:
Q  133 ctatttctataacaaaagataaaataaagttaaact 168  Q
    |||||||||||||||||||||||||||||| |||||    
T  39392781 ctatttctataacaaaagataaaataaagtcaaact 39392746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 168
Target Start/End: Complemental strand, 11119118 - 11119084
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaact 168  Q
    ||||||||||||||||||||||||||||| |||||    
T  11119118 tatttctataacaaaagataaaataaagtcaaact 11119084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 20672729 - 20672775
Alignment:
Q  140 tataacaaaagataaaataaagttaaactattgtcataagctatcct 186  Q
    ||||||||||||||||||||||| ||||| || | ||||||||||||    
T  20672729 tataacaaaagataaaataaagtcaaactgtttttataagctatcct 20672775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 176
Target Start/End: Original strand, 29699205 - 29699247
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaactattgtcat 176  Q
    ||||||||||||||||||||||||||||| ||| | |||||||    
T  29699205 tatttctataacaaaagataaaataaagtcaaaatgttgtcat 29699247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 40280324 - 40280274
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaactattgtcataagctatc 184  Q
    |||||||| |||||||||||||||||||| ||| | || ||||||||||||    
T  40280324 tatttctacaacaaaagataaaataaagtaaaattgttttcataagctatc 40280274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 168
Target Start/End: Complemental strand, 40728537 - 40728503
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaact 168  Q
    ||||||||||||||||||||||||||||| |||||    
T  40728537 tatttctataacaaaagataaaataaagtcaaact 40728503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 162
Target Start/End: Original strand, 42597350 - 42597380
Alignment:
Q  132 gctatttctataacaaaagataaaataaagt 162  Q
    |||||||||||||||||||||||||||||||    
T  42597350 gctatttctataacaaaagataaaataaagt 42597380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 168
Target Start/End: Original strand, 10437837 - 10437870
Alignment:
Q  135 atttctataacaaaagataaaataaagttaaact 168  Q
    |||||||||||||||||||||||||||| |||||    
T  10437837 atttctataacaaaagataaaataaagtcaaact 10437870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 11056788 - 11056743
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    |||||||||||||||||||  ||||||||||| ||||||| |||||    
T  11056788 gctatttctataacaaaaggaaaaataaagttgaactattttcata 11056743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 162
Target Start/End: Original strand, 14482152 - 14482181
Alignment:
Q  133 ctatttctataacaaaagataaaataaagt 162  Q
    ||||||||||||||||||||||||||||||    
T  14482152 ctatttctataacaaaagataaaataaagt 14482181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 25867035 - 25867080
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    ||||||||||||||||||||| ||||||||| ||| |||| |||||    
T  25867035 gctatttctataacaaaagatgaaataaagtcaaaatattttcata 25867080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 35453740 - 35453707
Alignment:
Q  136 tttctataacaaaagataaaataaagttaaacta 169  Q
    |||||| |||||||||||||||||||||||||||    
T  35453740 tttctacaacaaaagataaaataaagttaaacta 35453707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 171
Target Start/End: Original strand, 38561677 - 38561714
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaactatt 171  Q
    ||||| ||||||||||||||||||||||| ||||||||    
T  38561677 tatttatataacaaaagataaaataaagtcaaactatt 38561714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 163
Target Start/End: Complemental strand, 43908792 - 43908763
Alignment:
Q  134 tatttctataacaaaagataaaataaagtt 163  Q
    ||||||||||||||||||||||||||||||    
T  43908792 tatttctataacaaaagataaaataaagtt 43908763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 7096248 - 7096197
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcataagctat 183  Q
    ||||||||||||||||||||||||||||||| |||| ||| |||||||||||    
T  7096248 gctatttctataacaaaagataaaataaagtcaaaccattttcataagctat 7096197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 37063194 - 37063150
Alignment:
Q  133 ctatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    |||||||||||||||||||||||||||||| |||||||| |||||    
T  37063194 ctatttctataacaaaagataaaataaagtcaaactattttcata 37063150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 177
Target Start/End: Complemental strand, 35135781 - 35135738
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    ||||||||||||||||||||||||||||| |||||||| |||||    
T  35135781 tatttctataacaaaagataaaataaagtcaaactattttcata 35135738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 166
Target Start/End: Original strand, 10363699 - 10363733
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaa 166  Q
    |||||||||||||||||||||||||||||||||||    
T  10363699 gctatttctataacaaaagataaaataaagttaaa 10363733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 176
Target Start/End: Complemental strand, 38766962 - 38766920
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaactattgtcat 176  Q
    ||||||||||||||||| |||||||||||||||||||| ||||    
T  38766962 tatttctataacaaaagctaaaataaagttaaactattttcat 38766920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 166
Target Start/End: Original strand, 7853608 - 7853641
Alignment:
Q  133 ctatttctataacaaaagataaaataaagttaaa 166  Q
    ||||||||||||||||||||||||||||||||||    
T  7853608 ctatttctataacaaaagataaaataaagttaaa 7853641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 14295455 - 14295500
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    ||||||||||||||||||||||||||||||| ||||| || |||||    
T  14295455 gctatttctataacaaaagataaaataaagtcaaactgttttcata 14295500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 171
Target Start/End: Original strand, 6593252 - 6593288
Alignment:
Q  135 atttctataacaaaagataaaataaagttaaactatt 171  Q
    |||||||||||||||||||||||||||||||| ||||    
T  6593252 atttctataacaaaagataaaataaagttaaattatt 6593288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 10537794 - 10537750
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaactattgtcataa 178  Q
    |||||||||||||| | ||||||||||||||||||||| ||||||    
T  10537794 tatttctataacaagatataaaataaagttaaactattttcataa 10537750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 28586886 - 28586842
Alignment:
Q  133 ctatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    |||||||||||||||||||||||||||||| ||||| || |||||    
T  28586886 ctatttctataacaaaagataaaataaagtcaaactgttttcata 28586842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 166
Target Start/End: Complemental strand, 27106041 - 27106010
Alignment:
Q  135 atttctataacaaaagataaaataaagttaaa 166  Q
    ||||||||||||||||||||||||||||||||    
T  27106041 atttctataacaaaagataaaataaagttaaa 27106010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 186
Target Start/End: Complemental strand, 29117049 - 29116995
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaactattgtc--ataagctatcct 186  Q
    ||||||||||||||||||||||||||||| ||||| || ||  ||||||||||||    
T  29117049 tatttctataacaaaagataaaataaagtcaaactgttttcgtataagctatcct 29116995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 162
Target Start/End: Complemental strand, 29590862 - 29590831
Alignment:
Q  131 tgctatttctataacaaaagataaaataaagt 162  Q
    ||||||||||||||||||||||||||||||||    
T  29590862 tgctatttctataacaaaagataaaataaagt 29590831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 166
Target Start/End: Original strand, 465903 - 465937
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaa 166  Q
    ||||||||||| |||||||||||||||||||||||    
T  465903 gctatttctatgacaaaagataaaataaagttaaa 465937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 168
Target Start/End: Original strand, 1943202 - 1943236
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaact 168  Q
    ||||||||||| |||||||||||||||||||||||    
T  1943202 tatttctataataaaagataaaataaagttaaact 1943236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Complemental strand, 4948650 - 4948608
Alignment:
Q  137 ttctataacaaaagataaaataaagttaaactattgtcataag 179  Q
    |||||||||||||||||||||||||||||| |||  |||||||    
T  4948650 ttctataacaaaagataaaataaagttaaattatattcataag 4948608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 162
Target Start/End: Complemental strand, 12407782 - 12407752
Alignment:
Q  132 gctatttctataacaaaagataaaataaagt 162  Q
    |||||||||||||||||||||||||||||||    
T  12407782 gctatttctataacaaaagataaaataaagt 12407752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 166
Target Start/End: Complemental strand, 12595857 - 12595827
Alignment:
Q  136 tttctataacaaaagataaaataaagttaaa 166  Q
    |||||||||||||||||||||||||||||||    
T  12595857 tttctataacaaaagataaaataaagttaaa 12595827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 162
Target Start/End: Original strand, 34690823 - 34690853
Alignment:
Q  132 gctatttctataacaaaagataaaataaagt 162  Q
    |||||||||||||||||||||||||||||||    
T  34690823 gctatttctataacaaaagataaaataaagt 34690853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 171
Target Start/End: Original strand, 35960364 - 35960402
Alignment:
Q  133 ctatttctataacaaaagataaaataaagttaaactatt 171  Q
    |||||||||||| ||||||||||||||||| ||||||||    
T  35960364 ctatttctataataaaagataaaataaagtcaaactatt 35960402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 168
Target Start/End: Complemental strand, 10280698 - 10280661
Alignment:
Q  131 tgctatttctataacaaaagataaaataaagttaaact 168  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  10280698 tgctatttctataacaaaagatagaataaagtcaaact 10280661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 162
Target Start/End: Original strand, 10303751 - 10303780
Alignment:
Q  133 ctatttctataacaaaagataaaataaagt 162  Q
    ||||||||||||||||||||||||||||||    
T  10303751 ctatttctataacaaaagataaaataaagt 10303780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 12242810 - 12242757
Alignment:
Q  131 tgctatttctataacaaaagataaaataaagttaaactattgtcataagctatc 184  Q
    |||||||| ||||||||||||||||||| ||| ||| | || ||||||||||||    
T  12242810 tgctatttgtataacaaaagataaaatagagtcaaattgttttcataagctatc 12242757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 162
Target Start/End: Complemental strand, 35095903 - 35095874
Alignment:
Q  133 ctatttctataacaaaagataaaataaagt 162  Q
    ||||||||||||||||||||||||||||||    
T  35095903 ctatttctataacaaaagataaaataaagt 35095874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 4014545 - 4014513
Alignment:
Q  132 gctatttctataacaaaagataaaataaagtta 164  Q
    |||||||||||| ||||||||||||||||||||    
T  4014545 gctatttctatagcaaaagataaaataaagtta 4014513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 160
Target Start/End: Original strand, 5563653 - 5563681
Alignment:
Q  132 gctatttctataacaaaagataaaataaa 160  Q
    |||||||||||||||||||||||||||||    
T  5563653 gctatttctataacaaaagataaaataaa 5563681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 171
Target Start/End: Original strand, 11040996 - 11041032
Alignment:
Q  135 atttctataacaaaagataaaataaagttaaactatt 171  Q
    |||||||||||||| ||||||||||||| ||||||||    
T  11040996 atttctataacaaacgataaaataaagtcaaactatt 11041032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 160
Target Start/End: Original strand, 13224378 - 13224406
Alignment:
Q  132 gctatttctataacaaaagataaaataaa 160  Q
    |||||||||||||||||||||||||||||    
T  13224378 gctatttctataacaaaagataaaataaa 13224406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 164
Target Start/End: Complemental strand, 40048397 - 40048369
Alignment:
Q  136 tttctataacaaaagataaaataaagtta 164  Q
    |||||||||||||||||||||||||||||    
T  40048397 tttctataacaaaagataaaataaagtta 40048369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 42583100 - 42583132
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaa 166  Q
    ||||||||||||||||||| |||||||||||||    
T  42583100 tatttctataacaaaagatgaaataaagttaaa 42583132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 6976899 - 6976946
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaactattgtcataagct 181  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||    
T  6976899 tatttctataacaaaagataagataaagttaaactattttcataagct 6976946  T

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Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 30815752 - 30815711
Alignment:
Q  136 tttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  30815752 tttctataacaaaagataaaataaagttaaactattttcata 30815711  T

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Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 166
Target Start/End: Original strand, 4549815 - 4549849
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaa 166  Q
    |||||||||||||||||||||||||||||||||||    
T  4549815 gctatttctataacaaaagataaaataaagttaaa 4549849  T

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Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 14737824 - 14737774
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaactattgtcataagctatc 184  Q
    ||||||||||||||||||||||||||||| ||| | || ||||||||||||    
T  14737824 tatttctataacaaaagataaaataaagtcaaattgttttcataagctatc 14737774  T

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Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 186
Target Start/End: Complemental strand, 23373411 - 23373357
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcataagctatcct 186  Q
    |||||||||||| |||||||||||||||||| || || || ||||||||||||||    
T  23373411 gctatttctatatcaaaagataaaataaagtcaatctgttttcataagctatcct 23373357  T

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Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 42352026 - 42351980
Alignment:
Q  133 ctatttctataacaaaagataaaataaagttaaactattgtcataag 179  Q
    |||||||||||||||||| ||||||||||| |||||||| |||||||    
T  42352026 ctatttctataacaaaagttaaaataaagtcaaactattttcataag 42351980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 186
Target Start/End: Original strand, 50319241 - 50319295
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcataagctatcct 186  Q
    ||||||||||||||||||||||||||||||| ||  | || ||||||||||||||    
T  50319241 gctatttctataacaaaagataaaataaagtcaagttgttttcataagctatcct 50319295  T

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Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 173
Target Start/End: Original strand, 44251367 - 44251408
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgt 173  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  44251367 gctatttctataataaaagataaaataaagttaaattattgt 44251408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 4700187 - 4700155
Alignment:
Q  132 gctatttctataacaaaagataaaataaagtta 164  Q
    |||||||||||||||||||||||||||||||||    
T  4700187 gctatttctataacaaaagataaaataaagtta 4700155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 49557092 - 49557124
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaa 166  Q
    |||||||||||||||||||||||||||||||||    
T  49557092 tatttctataacaaaagataaaataaagttaaa 49557124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 171
Target Start/End: Complemental strand, 9507121 - 9507082
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactatt 171  Q
    ||||||||||||||||||| |||||||| |||||||||||    
T  9507121 gctatttctataacaaaagttaaaataatgttaaactatt 9507082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 15360845 - 15360888
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    ||||||||||||||||||||||||||||| ||||| || |||||    
T  15360845 tatttctataacaaaagataaaataaagtcaaactgttttcata 15360888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 171
Target Start/End: Complemental strand, 33339541 - 33339502
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactatt 171  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  33339541 gctatttctataccaaaagataaaatgaagttaaactatt 33339502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 171
Target Start/End: Original strand, 38578476 - 38578515
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactatt 171  Q
    ||||||||||||||||||||||| ||||||||||| ||||    
T  38578476 gctatttctataacaaaagataacataaagttaaattatt 38578515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 177
Target Start/End: Complemental strand, 44936709 - 44936666
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    ||||||||||||||||||||| ||||||| |||||||| |||||    
T  44936709 tatttctataacaaaagataagataaagtcaaactattttcata 44936666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 52286629 - 52286672
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    |||||||| ||||||||||||||||||||||||| ||| |||||    
T  52286629 tatttctacaacaaaagataaaataaagttaaacaattttcata 52286672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 166
Target Start/End: Complemental strand, 9572229 - 9572195
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaa 166  Q
    |||||||||||| ||||||||||||||||||||||    
T  9572229 gctatttctatagcaaaagataaaataaagttaaa 9572195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 166
Target Start/End: Complemental strand, 15687194 - 15687160
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaa 166  Q
    |||||||||||||||||| ||||||||||||||||    
T  15687194 gctatttctataacaaaatataaaataaagttaaa 15687160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 162
Target Start/End: Complemental strand, 17631222 - 17631192
Alignment:
Q  132 gctatttctataacaaaagataaaataaagt 162  Q
    |||||||||||||||||||||||||||||||    
T  17631222 gctatttctataacaaaagataaaataaagt 17631192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 186
Target Start/End: Complemental strand, 26293227 - 26293173
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcataagctatcct 186  Q
    ||||||||||||||||||  ||||||||||| ||| | || ||||||||||||||    
T  26293227 gctatttctataacaaaaagtaaaataaagtcaaattgttttcataagctatcct 26293173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 166
Target Start/End: Complemental strand, 31517861 - 31517827
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaa 166  Q
    |||||||||| ||||||||||||||||||||||||    
T  31517861 gctatttctacaacaaaagataaaataaagttaaa 31517827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 166
Target Start/End: Original strand, 36070199 - 36070233
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaa 166  Q
    ||||||| |||||||||||||||||||||||||||    
T  36070199 gctatttttataacaaaagataaaataaagttaaa 36070233  T

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Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 166
Target Start/End: Complemental strand, 46252803 - 46252769
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaa 166  Q
    ||||||| |||||||||||||||||||||||||||    
T  46252803 gctatttttataacaaaagataaaataaagttaaa 46252769  T

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Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 165
Target Start/End: Complemental strand, 172698 - 172665
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaa 165  Q
    ||||||||||||||||||||||| ||||||||||    
T  172698 gctatttctataacaaaagataacataaagttaa 172665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 5756807 - 5756762
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    ||||||||||||||||||||| | ||||||||||||| || |||||    
T  5756807 gctatttctataacaaaagatgatataaagttaaactgttttcata 5756762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 6074423 - 6074468
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    ||||||||||||||||||||| | ||||||||||||| || |||||    
T  6074423 gctatttctataacaaaagatgatataaagttaaactgttttcata 6074468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 165
Target Start/End: Original strand, 10280598 - 10280631
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaa 165  Q
    |||||||||||||||||||||||| |||||||||    
T  10280598 gctatttctataacaaaagataaagtaaagttaa 10280631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 23895285 - 23895330
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    ||||||||||||||||||||||||||||| | ||||| || |||||    
T  23895285 gctatttctataacaaaagataaaataaattcaaactgttctcata 23895330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 165
Target Start/End: Complemental strand, 29128415 - 29128386
Alignment:
Q  136 tttctataacaaaagataaaataaagttaa 165  Q
    ||||||||||||||||||||||||||||||    
T  29128415 tttctataacaaaagataaaataaagttaa 29128386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 2194479 - 2194447
Alignment:
Q  132 gctatttctataacaaaagataaaataaagtta 164  Q
    |||||||||||||||| ||||||||||||||||    
T  2194479 gctatttctataacaatagataaaataaagtta 2194447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 165
Target Start/End: Original strand, 7028242 - 7028274
Alignment:
Q  133 ctatttctataacaaaagataaaataaagttaa 165  Q
    ||||||||||| |||||||||||||||||||||    
T  7028242 ctatttctatagcaaaagataaaataaagttaa 7028274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 11211069 - 11211101
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaa 166  Q
    |||||||| ||||||||||||||||||||||||    
T  11211069 tatttctagaacaaaagataaaataaagttaaa 11211101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 168
Target Start/End: Complemental strand, 30259608 - 30259572
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaact 168  Q
    |||||||||||||||||| |||||||||||| |||||    
T  30259608 gctatttctataacaaaatataaaataaagtcaaact 30259572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 162
Target Start/End: Original strand, 36641826 - 36641854
Alignment:
Q  134 tatttctataacaaaagataaaataaagt 162  Q
    |||||||||||||||||||||||||||||    
T  36641826 tatttctataacaaaagataaaataaagt 36641854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 168
Target Start/End: Complemental strand, 37842476 - 37842440
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaact 168  Q
    |||||||||||| |||||||| |||||||||||||||    
T  37842476 gctatttctatagcaaaagatgaaataaagttaaact 37842440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 45234148 - 45234192
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaactattgtcataa 178  Q
    ||||||||||| ||||||||||||||||| ||| |||| ||||||    
T  45234148 tatttctataataaaagataaaataaagtcaaattattttcataa 45234192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 168
Target Start/End: Complemental strand, 45999409 - 45999373
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaact 168  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  45999409 gctatttctataacaaaagataagataaagtcaaact 45999373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 171
Target Start/End: Original strand, 48064261 - 48064297
Alignment:
Q  135 atttctataacaaaagataaaataaagttaaactatt 171  Q
    ||||||||| |||||||||||||||||| ||||||||    
T  48064261 atttctatagcaaaagataaaataaagtaaaactatt 48064297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 48748703 - 48748652
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcataagctatc 184  Q
    |||||||||||| |||||||| ||||||||||||| | || ||||||||||||    
T  48748703 gctatttctata-caaaagatgaaataaagttaaattgttttcataagctatc 48748652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 162
Target Start/End: Original strand, 49517021 - 49517049
Alignment:
Q  134 tatttctataacaaaagataaaataaagt 162  Q
    |||||||||||||||||||||||||||||    
T  49517021 tatttctataacaaaagataaaataaagt 49517049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 1195 - 1150
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||    
T  1195 gctatttctataacaaaagataaaataaagtcaaactattctcata 1150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 2780 - 2825
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||    
T  2780 gctatttctataacaaaagataaaataaagtcaaactattctcata 2825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000001; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 17952822 - 17952777
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||    
T  17952822 gctatttctataacaaaagataaaataaagtcaaactattttcata 17952777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 177
Target Start/End: Complemental strand, 1939451 - 1939408
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    ||||||||||||||||||||||||||||| |||||||| |||||    
T  1939451 tatttctataacaaaagataaaataaagtgaaactattttcata 1939408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 18962159 - 18962114
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    ||||||| ||||||||||||||||||||||||||||| || |||||    
T  18962159 gctatttttataacaaaagataaaataaagttaaactgttttcata 18962114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 31740080 - 31740035
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    |||||||||||||| |||||||||||||||| |||||||| |||||    
T  31740080 gctatttctataactaaagataaaataaagtcaaactattttcata 31740035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 168
Target Start/End: Original strand, 5133721 - 5133757
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaact 168  Q
    |||||||||||||||||||||||||||||| ||||||    
T  5133721 gctatttctataacaaaagataaaataaagataaact 5133757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 168
Target Start/End: Complemental strand, 5998823 - 5998787
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaact 168  Q
    ||||||| |||||||||||||||||||||||||||||    
T  5998823 gctatttttataacaaaagataaaataaagttaaact 5998787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 39567854 - 39567886
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaa 166  Q
    |||||||||||||||||||||||||||||||||    
T  39567854 tatttctataacaaaagataaaataaagttaaa 39567886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 168
Target Start/End: Original strand, 41407024 - 41407060
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaact 168  Q
    ||||||||||||||| |||||||||||||||||||||    
T  41407024 gctatttctataacacaagataaaataaagttaaact 41407060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 171
Target Start/End: Complemental strand, 9878803 - 9878764
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactatt 171  Q
    ||||||||||||||||||||||||||||| | ||||||||    
T  9878803 gctatttctataacaaaagataaaataaactcaaactatt 9878764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 171
Target Start/End: Original strand, 31461387 - 31461426
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactatt 171  Q
    ||||||||||||||||||||||||||||||| ||| ||||    
T  31461387 gctatttctataacaaaagataaaataaagtcaaattatt 31461426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 179
Target Start/End: Complemental strand, 32098429 - 32098382
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcataag 179  Q
    ||||||||||||||||||||||||||||||| ||| | || |||||||    
T  32098429 gctatttctataacaaaagataaaataaagtcaaagtgttttcataag 32098382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 33061330 - 33061279
Alignment:
Q  133 ctatttctataacaaaagataaaataaagttaaactattgtcataagctatc 184  Q
    |||||||||||||||||||||||  ||||||||||| |  ||||||||||||    
T  33061330 ctatttctataacaaaagataaagcaaagttaaactgtgttcataagctatc 33061279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 37033994 - 37034040
Alignment:
Q  133 ctatttctataacaaaagataaaataaagttaaactattgtcataag 179  Q
    |||||||||||| ||||||||||||||||| |||| ||| |||||||    
T  37033994 ctatttctataaaaaaagataaaataaagtcaaacgattttcataag 37034040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 161
Target Start/End: Complemental strand, 34055022 - 34054993
Alignment:
Q  132 gctatttctataacaaaagataaaataaag 161  Q
    ||||||||||||||||||||||||||||||    
T  34055022 gctatttctataacaaaagataaaataaag 34054993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 166
Target Start/End: Complemental strand, 36114639 - 36114610
Alignment:
Q  137 ttctataacaaaagataaaataaagttaaa 166  Q
    ||||||||||||||||||||||||||||||    
T  36114639 ttctataacaaaagataaaataaagttaaa 36114610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 3673758 - 3673790
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaa 166  Q
    |||||||||||||||| ||||||||||||||||    
T  3673758 tatttctataacaaaatataaaataaagttaaa 3673790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 3932301 - 3932333
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaa 166  Q
    |||||||||| ||||||||||||||||||||||    
T  3932301 tatttctatagcaaaagataaaataaagttaaa 3932333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 26857235 - 26857195
Alignment:
Q  128 gcttgctatttctataacaaaagataaaataaagttaaact 168  Q
    ||||||||||||||||||| |||||||||| |||| |||||    
T  26857235 gcttgctatttctataacacaagataaaatgaagtcaaact 26857195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 33192143 - 33192187
Alignment:
Q  133 ctatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    |||||||||||||| ||||||||||||||| ||||| || |||||    
T  33192143 ctatttctataacataagataaaataaagtcaaactgttttcata 33192187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 43199365 - 43199397
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaa 166  Q
    |||||||| ||||||||||||||||||||||||    
T  43199365 tatttctacaacaaaagataaaataaagttaaa 43199397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000002; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 20936122 - 20936079
Alignment:
Q  133 ctatttctataacaaaagataaaataaagttaaactattgtcat 176  Q
    |||||||||||||||||||||||||||||| |||||||| ||||    
T  20936122 ctatttctataacaaaagataaaataaagtcaaactattttcat 20936079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 186
Target Start/End: Complemental strand, 51044580 - 51044525
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaac-tattgtcataagctatcct 186  Q
    ||||||||||||||||||||||||||||||| |||| | || ||||||||||||||    
T  51044580 gctatttctataacaaaagataaaataaagtcaaacttgttttcataagctatcct 51044525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 5219622 - 5219576
Alignment:
Q  131 tgctatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    |||||| ||||||| |||||||||||||||||||||||||| |||||    
T  5219622 tgctatctctataataaaagataaaataaagttaaactattttcata 5219576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 166
Target Start/End: Original strand, 17884017 - 17884051
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaa 166  Q
    |||||||||||||||||||||||||||||||||||    
T  17884017 gctatttctataacaaaagataaaataaagttaaa 17884051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 4071832 - 4071876
Alignment:
Q  133 ctatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    |||||||||||||||||||||||||||||| ||| |||| |||||    
T  4071832 ctatttctataacaaaagataaaataaagtcaaattattttcata 4071876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 30338712 - 30338668
Alignment:
Q  133 ctatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    ||||||||||||||||||||| |||||||||||||| || |||||    
T  30338712 ctatttctataacaaaagatagaataaagttaaactgttttcata 30338668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 32724069 - 32724113
Alignment:
Q  133 ctatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    |||||||||| ||||||||||||||||||| |||||||| |||||    
T  32724069 ctatttctattacaaaagataaaataaagtcaaactattttcata 32724113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 47800581 - 47800613
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaa 166  Q
    |||||||||||||||||||||||||||||||||    
T  47800581 tatttctataacaaaagataaaataaagttaaa 47800613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 186
Target Start/End: Original strand, 4191688 - 4191743
Alignment:
Q  132 gctatttctataacaaaagat-aaaataaagttaaactattgtcataagctatcct 186  Q
    ||||||||||||||||||||| |||||||||| ||||| || ||||||| ||||||    
T  4191688 gctatttctataacaaaagataaaaataaagtcaaactgttttcataagttatcct 4191743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 4691827 - 4691882
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcataagctatcctt 187  Q
    |||||||||||| |||||||||||||||| | |||||||   ||||||||||||||    
T  4691827 gctatttctatatcaaaagataaaataaattcaaactatctccataagctatcctt 4691882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 35743255 - 35743318
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaactattgtcataagctatcctttagagtttat 197  Q
    ||||||||||||||||||||||||||||  |||||| | |||||| ||||| |  |||||||||    
T  35743255 tatttctataacaaaagataaaataaaggcaaactactttcataaactatcatgaagagtttat 35743318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 171
Target Start/End: Original strand, 47970267 - 47970306
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactatt 171  Q
    |||||||||||||||||||||||||| |||| ||||||||    
T  47970267 gctatttctataacaaaagataaaatgaagtcaaactatt 47970306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 166
Target Start/End: Original strand, 3155552 - 3155586
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaa 166  Q
    |||||||||||| ||||||||||||||||||||||    
T  3155552 gctatttctatagcaaaagataaaataaagttaaa 3155586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 162
Target Start/End: Original strand, 6364098 - 6364128
Alignment:
Q  132 gctatttctataacaaaagataaaataaagt 162  Q
    |||||||||||||||||||||||||||||||    
T  6364098 gctatttctataacaaaagataaaataaagt 6364128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 186
Target Start/End: Complemental strand, 21043333 - 21043280
Alignment:
Q  134 tatttctat-aacaaaagataaaataaagttaaactattgtcataagctatcct 186  Q
    ||||||||| ||||||||||||| || ||||||||| || ||||||||||||||    
T  21043333 tatttctattaacaaaagataaattatagttaaactgttttcataagctatcct 21043280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 166
Target Start/End: Complemental strand, 21683599 - 21683566
Alignment:
Q  133 ctatttctataacaaaagataaaataaagttaaa 166  Q
    |||||||||||||||||||||| |||||||||||    
T  21683599 ctatttctataacaaaagataagataaagttaaa 21683566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 162
Target Start/End: Original strand, 24929443 - 24929472
Alignment:
Q  133 ctatttctataacaaaagataaaataaagt 162  Q
    ||||||||||||||||||||||||||||||    
T  24929443 ctatttctataacaaaagataaaataaagt 24929472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 171
Target Start/End: Original strand, 27623586 - 27623623
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaactatt 171  Q
    ||||| ||||||||||||||||||||||| ||||||||    
T  27623586 tatttgtataacaaaagataaaataaagtcaaactatt 27623623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 36734846 - 36734887
Alignment:
Q  136 tttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    ||||||||||||||| ||||||||||| |||||||| |||||    
T  36734846 tttctataacaaaaggtaaaataaagtcaaactattttcata 36734887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 168
Target Start/End: Original strand, 2702989 - 2703025
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaact 168  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  2702989 gctatttatatagcaaaagataaaataaagttaaact 2703025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 6853196 - 6853248
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcataagctatc 184  Q
    ||||||| ||||||||| ||||||||| ||| |||||||  ||||||||||||    
T  6853196 gctatttttataacaaaggataaaatagagtcaaactatgttcataagctatc 6853248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 177
Target Start/End: Complemental strand, 6978821 - 6978785
Alignment:
Q  141 ataacaaaagataaaataaagttaaactattgtcata 177  Q
    |||||||||||||||||| |||||||||||| |||||    
T  6978821 ataacaaaagataaaatatagttaaactattttcata 6978785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 171
Target Start/End: Original strand, 11785234 - 11785270
Alignment:
Q  135 atttctataacaaaagataaaataaagttaaactatt 171  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  11785234 atttctataacaaaagatgaaataaagtcaaactatt 11785270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 176
Target Start/End: Original strand, 24160939 - 24160983
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcat 176  Q
    ||||||||||||||||| |||||||| |||||||| |||| ||||    
T  24160939 gctatttctataacaaaggataaaatcaagttaaattattttcat 24160983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 162
Target Start/End: Original strand, 30024651 - 30024679
Alignment:
Q  134 tatttctataacaaaagataaaataaagt 162  Q
    |||||||||||||||||||||||||||||    
T  30024651 tatttctataacaaaagataaaataaagt 30024679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 49085939 - 49085983
Alignment:
Q  133 ctatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    |||||| |||||||||||||||||||| || |||||||| |||||    
T  49085939 ctatttatataacaaaagataaaataatgtcaaactattttcata 49085983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 54325157 - 54325113
Alignment:
Q  133 ctatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    |||||||||| ||||||||||||||||||| ||||| || |||||    
T  54325157 ctatttctattacaaaagataaaataaagtcaaactgttttcata 54325113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.00000000009; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 166
Target Start/End: Complemental strand, 43153023 - 43152989
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaa 166  Q
    |||||||||||||||||||||||||||||||||||    
T  43153023 gctatttctataacaaaagataaaataaagttaaa 43152989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 40689107 - 40689062
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    |||||||||||| |||||||||||||||||||||| |||| |||||    
T  40689107 gctatttctatagcaaaagataaaataaagttaaattattttcata 40689062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 162
Target Start/End: Original strand, 5373173 - 5373204
Alignment:
Q  131 tgctatttctataacaaaagataaaataaagt 162  Q
    ||||||||||||||||||||||||||||||||    
T  5373173 tgctatttctataacaaaagataaaataaagt 5373204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 6630551 - 6630594
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    ||||| || ||||||||||||||||||||||||||||| |||||    
T  6630551 tatttttacaacaaaagataaaataaagttaaactattatcata 6630594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 7244651 - 7244702
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcataagctat 183  Q
    |||||||||||| |||||||||||| ||||| ||||| || |||||||||||    
T  7244651 gctatttctatatcaaaagataaaagaaagtcaaactgttttcataagctat 7244702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 171
Target Start/End: Original strand, 47004036 - 47004075
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactatt 171  Q
    |||||||||||||||| |||||||||||||| ||||||||    
T  47004036 gctatttctataacaatagataaaataaagtcaaactatt 47004075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 167
Target Start/End: Original strand, 2999141 - 2999175
Alignment:
Q  133 ctatttctataacaaaagataaaataaagttaaac 167  Q
    |||||||||||||||||||||||||||||| ||||    
T  2999141 ctatttctataacaaaagataaaataaagtcaaac 2999175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 162
Target Start/End: Original strand, 28178918 - 28178948
Alignment:
Q  132 gctatttctataacaaaagataaaataaagt 162  Q
    |||||||||||||||||||||||||||||||    
T  28178918 gctatttctataacaaaagataaaataaagt 28178948  T

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Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 186
Target Start/End: Complemental strand, 35809025 - 35808971
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcataagctatcct 186  Q
    ||||||||||||||||||||||||||| ||| |||||| | |  |||||||||||    
T  35809025 gctatttctataacaaaagataaaatatagtcaaactaattttgtaagctatcct 35808971  T

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Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 162
Target Start/End: Original strand, 42656464 - 42656494
Alignment:
Q  132 gctatttctataacaaaagataaaataaagt 162  Q
    |||||||||||||||||||||||||||||||    
T  42656464 gctatttctataacaaaagataaaataaagt 42656494  T

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Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 3241390 - 3241443
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcataagctatcc 185  Q
    |||||||||||||||||| | |||||||||| ||||| || ||||||| |||||    
T  3241390 gctatttctataacaaaataaaaaataaagtcaaactgttttcataagatatcc 3241443  T

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Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 5006630 - 5006585
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcata 177  Q
    |||||| |||||||||||||||||||||||| ||||| || |||||    
T  5006630 gctattcctataacaaaagataaaataaagtcaaactgttttcata 5006585  T

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Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 166
Target Start/End: Original strand, 15328556 - 15328589
Alignment:
Q  133 ctatttctataacaaaagataaaataaagttaaa 166  Q
    |||||||||||| |||||||||||||||||||||    
T  15328556 ctatttctataataaaagataaaataaagttaaa 15328589  T

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Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 171
Target Start/End: Original strand, 22355855 - 22355892
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaactatt 171  Q
    ||||||||||| || |||||||||||||||||||||||    
T  22355855 tatttctataataagagataaaataaagttaaactatt 22355892  T

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Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 161
Target Start/End: Complemental strand, 2727480 - 2727452
Alignment:
Q  133 ctatttctataacaaaagataaaataaag 161  Q
    |||||||||||||||||||||||||||||    
T  2727480 ctatttctataacaaaagataaaataaag 2727452  T

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Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 168
Target Start/End: Original strand, 2894766 - 2894802
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaact 168  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  2894766 gctatttctataacaaaagataaattaaagttgaact 2894802  T

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Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 171
Target Start/End: Complemental strand, 18749928 - 18749892
Alignment:
Q  135 atttctataacaaaagataaaataaagttaaactatt 171  Q
    ||||||||||||||||||||| |||||| ||||||||    
T  18749928 atttctataacaaaagataaagtaaagtcaaactatt 18749892  T

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Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 21853235 - 21853203
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaa 166  Q
    ||||||||| |||||||||||||||||||||||    
T  21853235 tatttctattacaaaagataaaataaagttaaa 21853203  T

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Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 160
Target Start/End: Original strand, 24973893 - 24973921
Alignment:
Q  132 gctatttctataacaaaagataaaataaa 160  Q
    |||||||||||||||||||||||||||||    
T  24973893 gctatttctataacaaaagataaaataaa 24973921  T

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Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 30161011 - 30160959
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaactattgtcataagctatc 184  Q
    |||||||||||  |||||||||||||||||| ||||| || |||||| |||||    
T  30161011 gctatttctatggcaaaagataaaataaagtcaaactgttttcataatctatc 30160959  T

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Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 168
Target Start/End: Original strand, 31341143 - 31341179
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaact 168  Q
    ||||||| ||||||||||||||||||||||| |||||    
T  31341143 gctatttgtataacaaaagataaaataaagtcaaact 31341179  T

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Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 34083644 - 34083612
Alignment:
Q  134 tatttctataacaaaagataaaataaagttaaa 166  Q
    |||||||||| ||||||||||||||||||||||    
T  34083644 tatttctatagcaaaagataaaataaagttaaa 34083612  T

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Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 162
Target Start/End: Complemental strand, 39591586 - 39591558
Alignment:
Q  134 tatttctataacaaaagataaaataaagt 162  Q
    |||||||||||||||||||||||||||||    
T  39591586 tatttctataacaaaagataaaataaagt 39591558  T

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Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 168
Target Start/End: Original strand, 43328198 - 43328234
Alignment:
Q  132 gctatttctataacaaaagataaaataaagttaaact 168  Q
    |||||||||||||| ||||||||||| ||||||||||    
T  43328198 gctatttctataaccaaagataaaattaagttaaact 43328234  T

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Target: scaffold0549 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 165
Target Start/End: Complemental strand, 1840 - 1812
Alignment:
Q  137 ttctataacaaaagataaaataaagttaa 165  Q
    |||||||||||||||||||||||||||||    
T  1840 ttctataacaaaagataaaataaagttaa 1812  T

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Target: scaffold0549; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 165
Target Start/End: Complemental strand, 3930 - 3902
Alignment:
Q  137 ttctataacaaaagataaaataaagttaa 165  Q
    |||||||||||||||||||||||||||||    
T  3930 ttctataacaaaagataaaataaagttaa 3902  T

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