View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6033_low_35 (Length: 251)
Name: NF6033_low_35
Description: NF6033
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6033_low_35 |
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Alignment Details
Target: chr7 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 9 - 238
Target Start/End: Original strand, 31628889 - 31629118
Alignment:
| Q |
9 |
aaagaaaaatgaaatcttagaacctatgaagaagtagatgtagaagagccgctaacccatttgtcagcaacagaatctggtgaagttgggtaaggaccct |
108 |
Q |
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| T |
31628889 |
aaagaaaaatgaaatcttagaacctatgaagaagtagatgtagaagagccgctaacccatttttcagcaacagaatctggtgaagttgggtaaggaccct |
31628988 |
T |
|
| Q |
109 |
tcttcagaagtacaagctcatctgttctaacaacaacatccaatacttttgattcccgtgtttcaggttcgtcactcttgattcctcgcaatatctctac |
208 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||| ||| || |
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| T |
31628989 |
tcttcagaagtacaagctcatctgttctgacaacaacatccaatacttttgattcctgtgtttcaggttcatcactcttgattgctcgcaatacctccac |
31629088 |
T |
|
| Q |
209 |
aatctcatccattgaaggtctcaagtctct |
238 |
Q |
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|||||||||||||||||||| || |||||| |
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| T |
31629089 |
aatctcatccattgaaggtcgcaggtctct |
31629118 |
T |
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