View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6037_high_1 (Length: 403)

Name: NF6037_high_1
Description: NF6037
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6037_high_1
NF6037_high_1
[»] chr5 (14 HSPs)
chr5 (9-388)||(32837235-32837607)
chr5 (16-90)||(42061645-42061719)
chr5 (9-90)||(37214918-37214999)
chr5 (11-90)||(28788167-28788246)
chr5 (9-79)||(21336499-21336569)
chr5 (14-79)||(21827798-21827863)
chr5 (16-79)||(22937833-22937896)
chr5 (22-79)||(21333483-21333540)
chr5 (9-90)||(28441948-28442029)
chr5 (9-90)||(43490945-43491026)
chr5 (23-77)||(40916667-40916721)
chr5 (9-74)||(14376638-14376702)
chr5 (16-77)||(31863031-31863092)
chr5 (14-87)||(39191488-39191561)
[»] chr6 (7 HSPs)
chr6 (9-218)||(2371565-2371764)
chr6 (17-90)||(9953196-9953269)
chr6 (9-90)||(34501566-34501647)
chr6 (9-79)||(5738967-5739037)
chr6 (16-90)||(23379580-23379654)
chr6 (16-90)||(23388919-23388993)
chr6 (340-388)||(2371886-2371934)
[»] chr4 (18 HSPs)
chr4 (9-90)||(5721738-5721819)
chr4 (9-90)||(37104028-37104109)
chr4 (16-90)||(18910763-18910837)
chr4 (9-90)||(15431316-15431397)
chr4 (9-90)||(15437930-15438011)
chr4 (14-86)||(3798567-3798639)
chr4 (9-90)||(9717103-9717184)
chr4 (9-79)||(19861065-19861135)
chr4 (9-90)||(5680621-5680702)
chr4 (18-79)||(33410740-33410801)
chr4 (14-79)||(12237511-12237576)
chr4 (23-79)||(27013396-27013452)
chr4 (16-79)||(40617590-40617653)
chr4 (9-79)||(19865421-19865491)
chr4 (9-78)||(53093873-53093941)
chr4 (17-77)||(5669788-5669848)
chr4 (17-79)||(49269895-49269956)
chr4 (25-76)||(48014721-48014772)
[»] chr3 (18 HSPs)
chr3 (9-90)||(18645508-18645589)
chr3 (11-90)||(53815126-53815205)
chr3 (9-90)||(16185423-16185504)
chr3 (14-90)||(35411834-35411910)
chr3 (16-90)||(23299320-23299394)
chr3 (9-90)||(17532484-17532565)
chr3 (16-79)||(6445439-6445502)
chr3 (16-90)||(6922049-6922123)
chr3 (9-90)||(10884170-10884251)
chr3 (16-79)||(52198464-52198527)
chr3 (16-79)||(55032715-55032778)
chr3 (17-90)||(538175-538248)
chr3 (9-77)||(54736631-54736699)
chr3 (16-79)||(28265160-28265223)
chr3 (11-90)||(54460531-54460609)
chr3 (23-90)||(8462325-8462392)
chr3 (26-77)||(9392057-9392108)
chr3 (17-90)||(10107394-10107467)
[»] chr1 (6 HSPs)
chr1 (9-90)||(2793451-2793532)
chr1 (9-90)||(1951112-1951193)
chr1 (9-90)||(42021875-42021956)
chr1 (9-90)||(49499335-49499416)
chr1 (9-90)||(29644075-29644156)
chr1 (9-79)||(34733042-34733111)
[»] chr2 (12 HSPs)
chr2 (11-90)||(10600117-10600196)
chr2 (9-92)||(29439727-29439810)
chr2 (9-90)||(26358824-26358905)
chr2 (9-90)||(38006053-38006134)
chr2 (14-90)||(25821684-25821760)
chr2 (9-88)||(25873355-25873434)
chr2 (9-90)||(25869987-25870068)
chr2 (9-90)||(36809202-36809283)
chr2 (13-77)||(30275472-30275535)
chr2 (16-79)||(25139818-25139881)
chr2 (26-78)||(16788557-16788609)
chr2 (25-75)||(30925919-30925969)
[»] chr7 (7 HSPs)
chr7 (16-90)||(8276171-8276245)
chr7 (11-90)||(45287904-45287983)
chr7 (11-90)||(45291240-45291319)
chr7 (9-90)||(10431538-10431619)
chr7 (16-90)||(26556669-26556743)
chr7 (9-90)||(2442045-2442125)
chr7 (9-90)||(4542226-4542306)
[»] scaffold0270 (3 HSPs)
scaffold0270 (15-90)||(826-901)
scaffold0270 (15-90)||(4186-4261)
scaffold0270 (15-90)||(11316-11391)
[»] chr8 (13 HSPs)
chr8 (14-85)||(43682569-43682640)
chr8 (9-90)||(45156685-45156766)
chr8 (16-79)||(17895295-17895358)
chr8 (16-86)||(25595455-25595525)
chr8 (17-86)||(33878009-33878078)
chr8 (14-78)||(20520109-20520173)
chr8 (16-91)||(25228171-25228246)
chr8 (9-79)||(5540773-5540843)
chr8 (16-86)||(25592270-25592340)
chr8 (17-79)||(10663171-10663233)
chr8 (16-86)||(18722081-18722151)
chr8 (23-79)||(23612745-23612801)
chr8 (14-61)||(14421021-14421068)
[»] scaffold0080 (1 HSPs)
scaffold0080 (9-90)||(26397-26478)
[»] scaffold0015 (1 HSPs)
scaffold0015 (9-90)||(197383-197464)
[»] scaffold0005 (1 HSPs)
scaffold0005 (9-90)||(291115-291196)
[»] scaffold0035 (1 HSPs)
scaffold0035 (16-79)||(61756-61819)
[»] scaffold0381 (1 HSPs)
scaffold0381 (23-79)||(6331-6387)


Alignment Details
Target: chr5 (Bit Score: 237; Significance: 1e-131; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 9 - 388
Target Start/End: Original strand, 32837235 - 32837607
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggcatactttgaagtgcttaag 108  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  32837235 agcataggatgagtttcattcgacattggttaaaacgtgtcacgatgactatttcgtgacacgattttagggacatgtgacatactttgaagtgcttaag 32837334  T
Q  109 agtgaagctaaaaaattatcatggcttaattatcatatagccatcatatagccacacttacggcatatgcttggcaattgg-aaatagaaaaataaaaac 207  Q
    |||||||||||||| ||||||||||||||||           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  32837335 agtgaagctaaaaatttatcatggcttaatt-----------atcatatagccacacttacggcatatgcttggcaattggaaaatagaaaaataaaaac 32837423  T
Q  208 aaatgggctttgacccaatcattttggtgttgacccgtgaaaga----aaagaaactagctaggttacctgaacctgtnnnnnnnggaagcaagtgacac 303  Q
    |||||||||||||||||| ||||||||||||||| |||||||||    |||||||||||||||||||||||||||| |       |||||||||||||||    
T  32837424 aaatgggctttgacccaaccattttggtgttgactcgtgaaagaaaagaaagaaactagctaggttacctgaacctat--aaaaaggaagcaagtgacac 32837521  T
Q  304 aaagaa-aagaagattgatggcttggcacaaagctactttcagcaatcacgttttcggcagagaggaaggaagcatatgggaaaag 388  Q
    ||| || | || |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32837522 aaataagaggaggattgacggcttggcacaaagcgactttcagcaatcacgttttcggcagagaggaaggaagcatatgggaaaag 32837607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 42061645 - 42061719
Alignment:
Q  16 gatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  42061645 gatgaggttcattcgacattggttaaatcgtgtcacgatagctatttcgtgacatgattttagggacatgtggca 42061719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 37214918 - 37214999
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||    
T  37214918 agcacaggatgaggttcattcgacattggttaaaacgtgtcatgatggctatttcgtgacacgattttaggaacatgtggca 37214999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 28788246 - 28788167
Alignment:
Q  11 cataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||    
T  28788246 cataggatgaggtttattcgacattggttaaaacgtgtcacgatggctatttcgtgacacgattttagaaacatgtggca 28788167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 21336569 - 21336499
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagg 79  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21336569 agcacaggatgaggttcattcgacattggttaaaacgtgtcacgatggctatttcgtgacacgattttagg 21336499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 21827863 - 21827798
Alignment:
Q  14 aggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagg 79  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21827863 aggatgaggttcattcgacattggttaaaacgtgtcacgatggctatttcgtgacacgattttagg 21827798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 22937896 - 22937833
Alignment:
Q  16 gatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagg 79  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  22937896 gatgaggttcattcgacattgattaaaacgtgtcacgatggctatttcgtgacacgattttagg 22937833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 21333540 - 21333483
Alignment:
Q  22 gttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagg 79  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21333540 gttcattcgacattggttaaaacgtgtcacgatggctatttcgtgacacgattttagg 21333483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 28442029 - 28441948
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    |||| ||||||||||||| || ||||||| |||||||||||| ||| |||||||||||||||||||||| ||||||||||||    
T  28442029 agcacaggatgaggttcactcaacattggctaaaacgtgtcatgatggctatttcgtgacacgattttaaggacatgtggca 28441948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 43490945 - 43491026
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    |||| ||||||||||||||| | ||||||||||||||| |||||||  ||||||||| ||||||||||||||||||||||||    
T  43490945 agcacaggatgaggttcatttggcattggttaaaacgtatcacgatgtctatttcgtaacacgattttagggacatgtggca 43491026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 40916721 - 40916667
Alignment:
Q  23 ttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgatttta 77  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  40916721 ttcattcgacattggttaaaacgtgtcacgatggctatttcgtgacacgatttta 40916667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 14376702 - 14376638
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgatt 74  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  14376702 agcacaggatgaggttcattcgacattg-ttaaaacgtgtcacgatggctatttcgtgacacgatt 14376638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 31863031 - 31863092
Alignment:
Q  16 gatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgatttta 77  Q
    ||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||    
T  31863031 gatgaagttcattcgacattgtttaaatcgtgtcacgatggctatttcgtgacacgatttta 31863092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 39191488 - 39191561
Alignment:
Q  14 aggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtg 87  Q
    ||||||||||| |||||| ||||||||||||||||||| ||  ||||||||| ||||||||||| | |||||||    
T  39191488 aggatgaggtttattcgatattggttaaaacgtgtcacaatgtctatttcgtaacacgattttaagaacatgtg 39191561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 129; Significance: 1e-66; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 9 - 218
Target Start/End: Original strand, 2371565 - 2371764
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggcatactttgaagtgcttaag 108  Q
    |||| |||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2371565 agcacaggacgaggttcattcgacattggttaaaacgtgtcatgatggctatttcgtgacacgattttagggacatgtggcatactttgaagtgcttaag 2371664  T
Q  109 agtgaagctaaaaaattatcatggcttaattatcatatagccatcatatagccacacttacggcatatgcttggcaattgg-aaatagaaaaataaaaac 207  Q
    ||||||||| |||  ||||||||||||||||           ||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||    
T  2371665 agtgaagctgaaattttatcatggcttaatt-----------atcatatagccacacttacggtatatgcttggcaattggaaaatagtaaaataaaaac 2371753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 9953196 - 9953269
Alignment:
Q  17 atgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9953196 atgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttaggaacatgtggca 9953269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 34501566 - 34501647
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    ||||||||||||||||||||||||||| | |||||||||||||||| |||||||| |||||| |||||||||||||||||||    
T  34501566 agcataggatgaggttcattcgacattagctaaaacgtgtcacgatggctatttcatgacacaattttagggacatgtggca 34501647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 5739037 - 5738967
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagg 79  Q
    |||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  5739037 agcaaaggatgaggttcattcgacattggttaaaacgcgtcacgatggctatttcgtgacacgattttagg 5738967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 23379654 - 23379580
Alignment:
Q  16 gatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  23379654 gatgaggttcactcgacattgattaaaacgtgtcacgatagctatttcgtgacacgattctaggaacatgtggca 23379580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 23388993 - 23388919
Alignment:
Q  16 gatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  23388993 gatgaggttcactcgacattgattaaaacgtgtcacgatagctatttcgtgacacgattctaggaacatgtggca 23388919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 2371886 - 2371934
Alignment:
Q  340 tttcagcaatcacgttttcggcagagaggaaggaagcatatgggaaaag 388  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||    
T  2371886 tttcggcaatcacgttttcggcagagaggaaggaagcatatggaaaaag 2371934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 8e-34; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 5721819 - 5721738
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  5721819 agcacaggatgaggttcattcgacattggttaaatcgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 5721738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 37104109 - 37104028
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  37104109 agcacaggatgaggttcattcgacattggttaaatcgtgtcacgatggctatttcgtgacacgattttagggacatgtggca 37104028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 18910763 - 18910837
Alignment:
Q  16 gatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  18910763 gatgaggttcattcgacattggttaaaacgtgtcacgatggctatttcatgacacgattttagggacatgtggca 18910837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 15431316 - 15431397
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    |||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||    
T  15431316 agcacaggatgaggttcattcgacattggttaaaatgtgtcacgatggctatttcgtgacacgattttaggaacatgtggca 15431397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 15437930 - 15438011
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    |||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||    
T  15437930 agcacaggatgaggttcattcgacattggttaaaatgtgtcacgatggctatttcgtgacacgattttaggaacatgtggca 15438011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 3798639 - 3798567
Alignment:
Q  14 aggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgt 86  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  3798639 aggatgaggttcattcgacattggttaaaacgtgtcacgatggctatttcgtgacacgattttaggaacatgt 3798567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 9717103 - 9717184
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    |||| |||||||||||| |||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||    
T  9717103 agcacaggatgaggttcgttcgacattggttaaatcgtgtcacgatggctctttcgtgacacgattttagggacatgtggca 9717184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 19861135 - 19861065
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagg 79  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  19861135 agcacaggatgaggttcattcgacattggttaaaacgtgtcaagatggctatttcgtgacacgattttagg 19861065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 5680621 - 5680702
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    ||||||| |||||||||||||||||||||||||||||||||||  | |||||||| ||||||||||||||| ||||||||||    
T  5680621 agcatagaatgaggttcattcgacattggttaaaacgtgtcacttttgctatttcttgacacgattttaggaacatgtggca 5680702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 33410801 - 33410740
Alignment:
Q  18 tgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagg 79  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33410801 tgaggttcattcgacattggttaaaacgtgtcacgatggctatttcgtgacacgattttagg 33410740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 12237511 - 12237576
Alignment:
Q  14 aggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagg 79  Q
    ||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||    
T  12237511 aggatgaggttcattcgacattggttaaaatatgtcacgatggctatttcgtgacacgattttagg 12237576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 27013396 - 27013452
Alignment:
Q  23 ttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagg 79  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27013396 ttcattcgacattggttaaaacgtgtcacgatggctatttcgtgacacgattttagg 27013452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 40617653 - 40617590
Alignment:
Q  16 gatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagg 79  Q
    ||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||    
T  40617653 gatgaggttcattcgacattgattaaaacgagtcacgatggctatttcgtgacacgattttagg 40617590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 19865491 - 19865421
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagg 79  Q
    |||| ||||||||||||||||||||||||||||||||||  | ||| ||||||||||||||||||||||||    
T  19865491 agcacaggatgaggttcattcgacattggttaaaacgtgctaagatggctatttcgtgacacgattttagg 19865421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 53093873 - 53093941
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttag 78  Q
    |||| ||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||    
T  53093873 agcacaggatgaggttcattcgacattggt-agaacgtgtcacgatggctatttcgtgacacgattttag 53093941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 5669788 - 5669848
Alignment:
Q  17 atgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgatttta 77  Q
    |||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  5669788 atgaggtttattcgacattggttaaaacgtgtcacggtggctatttcgtgacacgatttta 5669848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 49269895 - 49269956
Alignment:
Q  17 atgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagg 79  Q
    ||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  49269895 atgagattcattcgacattggttaaaacgtgtcacaat-gctatttcgtgacacgattttagg 49269956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 48014772 - 48014721
Alignment:
Q  25 cattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgatttt 76  Q
    |||||||||||| | ||||||||||| ||| ||||||||||||||| |||||    
T  48014772 cattcgacattgatgaaaacgtgtcatgatggctatttcgtgacacaatttt 48014721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 8e-34; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 18645589 - 18645508
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18645589 agcacaggatgaggttcattcgacattggttaaatcgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 18645508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 53815126 - 53815205
Alignment:
Q  11 cataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||    
T  53815126 cataggatgaggttcattcgacattggttaaaatgtgtcacgatggctatttcgtgacacgattttaggaacatgtggca 53815205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 16185504 - 16185423
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    |||| ||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16185504 agcacaggatgaggttcactcgacattggctaaaacgtgtcacgatggctatttcgtgacacgattttagggacatgtggca 16185423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 35411834 - 35411910
Alignment:
Q  14 aggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||    
T  35411834 aggatgaggttcattcgacattggttaaaatgtgtcacgatggctatttcgtgacacgattttaggaacatgtggca 35411910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 23299394 - 23299320
Alignment:
Q  16 gatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  23299394 gatgaggttcattcgacattgattaaaacgtgtcacgatggctatttcgtgacacgattttaggaacatgtggca 23299320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 17532565 - 17532484
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||    
T  17532565 agcacaggatgaggttcattcgatattggttaaaacgtgtcacgatgactatttcgtgacacgattttaggaacatgtggca 17532484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 6445502 - 6445439
Alignment:
Q  16 gatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagg 79  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6445502 gatgaggttcattcgacattggttaaaacgtgtcacgatggctatttcgtgacacgattttagg 6445439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 6922049 - 6922123
Alignment:
Q  16 gatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    |||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  6922049 gatgaggttcattcaacattggtgaaaacgtgtcacgatggctatttcgtgacacgattttaggaacatgtggca 6922123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 10884170 - 10884251
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    |||| ||||| ||||||||||||||||| ||||||||||||| ||| || ||||||||||||||||||||||||||||||||    
T  10884170 agcacaggattaggttcattcgacattgattaaaacgtgtcatgatggccatttcgtgacacgattttagggacatgtggca 10884251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 52198464 - 52198527
Alignment:
Q  16 gatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagg 79  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  52198464 gatgaggttcattcgacattggttaaaatgtgtcacgatggctatttcgtgacacgattttagg 52198527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 55032778 - 55032715
Alignment:
Q  16 gatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagg 79  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  55032778 gatgaggttcattcgacattggttaaaacgtgtcacgatgactatttcgtgacacgattttagg 55032715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 538175 - 538248
Alignment:
Q  17 atgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    |||| ||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||| |||||    
T  538175 atgaagttcattcgacattggttaaaacgtgttacgatggttatttcgtgacacgattttagggacatatggca 538248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 54736699 - 54736631
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgatttta 77  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||  |||||||||||||||||||||    
T  54736699 agcataggatgaggttcattcggtattggttaaaacgtgtcacgatgtctatttcgtgacacgatttta 54736631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 28265160 - 28265223
Alignment:
Q  16 gatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagg 79  Q
    ||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  28265160 gatgaagttcattcgacattggttaaaacgtgtcacggtggctatttcgtgacacgattttagg 28265223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 54460531 - 54460609
Alignment:
Q  11 cataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    ||||||||||| ||||||| | |||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||    
T  54460531 cataggatgag-ttcattcaagattggttaaaacgtgtcacgatggctatttcgtgacacgattttaagaacatgtggca 54460609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 8462392 - 8462325
Alignment:
Q  23 ttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    |||||||||||||| ||||||||| ||||||| |||||||||||||||||||||| ||||| ||||||    
T  8462392 ttcattcgacattgattaaaacgtatcacgatggctatttcgtgacacgattttaaggacacgtggca 8462325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 9392057 - 9392108
Alignment:
Q  26 attcgacattggttaaaacgtgtcacgatagctatttcgtgacacgatttta 77  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  9392057 attcgacattggctaaaacgtgtcacgatggctatttcgtgacacgatttta 9392108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 10107467 - 10107394
Alignment:
Q  17 atgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    |||| ||| ||| |||||||||||||||| || ||||| | ||||||||||||||||||||||||||| |||||    
T  10107467 atgaagttaatttgacattggttaaaacgcgttacgatggttatttcgtgacacgattttagggacatatggca 10107394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 8e-34; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 2793451 - 2793532
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  2793451 agcacaggatgaggttcattcgacattggttaaaacgtgtcacgatggctatttcgtgacacgattttagggacatgtggca 2793532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 1951193 - 1951112
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  1951193 agcataggatgaggttcattcgacagtggttaaaacgtgtcacgatggctatttcgtgacacgattttaggaacatgtggca 1951112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 42021875 - 42021956
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  42021875 agcatcggatgaggttcattcgacattggttaaaacgtgttacgatggctatttcgtgacacgattttagggacatgtggca 42021956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 49499416 - 49499335
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  49499416 agcatatgatgaggttcattcgacattggttaaaacgtgtcacgatggctatttcgtgacacgattttaggaacatgtggca 49499335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 29644156 - 29644075
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    |||| |||||||| ||||||||||||||| |||||||||| ||||| |||||||||||||| ||||||||||||||||||||    
T  29644156 agcacaggatgagattcattcgacattggctaaaacgtgttacgatggctatttcgtgacatgattttagggacatgtggca 29644075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 34733111 - 34733042
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagg 79  Q
    |||| ||||||||||||||||||||||||| |||| |||||||||| |||||||||||||| |||||||||    
T  34733111 agcacaggatgaggttcattcgacattggt-aaaatgtgtcacgatggctatttcgtgacatgattttagg 34733042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 1e-32; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 10600117 - 10600196
Alignment:
Q  11 cataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  10600117 cataggatgaggttcattcgacattggttaaaacgtgtcacgatggctatttcgtgacacgattttaggaacatgtggca 10600196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 29439727 - 29439810
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggcata 92  Q
    |||| ||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29439727 agcacaggatgaagttcattcgatattggttaaaacgtgtcacgatggctatttcgtgacacgattttagggacatgtggcata 29439810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 26358824 - 26358905
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    |||| ||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  26358824 agcacaggatgaggttcattcggcattggttaaatcgtgtcacgatggctatttcgtgacacgattttagggacatgtggca 26358905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 38006134 - 38006053
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||    
T  38006134 agcacaggatgaggttcattcgacattggttaaaacgtgtcacgatggctatttcgtgacacgatttcaggaacatgtggca 38006053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 25821760 - 25821684
Alignment:
Q  14 aggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||    
T  25821760 aggatgaggttcattcgacattggttaaaatgtgtcacgatggctatttcgtgacacgattttaggaacatgtggca 25821684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 25873355 - 25873434
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtgg 88  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||    
T  25873355 agcacaggatgaggttcattcgacattggttaaaccgtgtcacgatggctatttcgtgacacgattttaggaacatgtgg 25873434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 25869987 - 25870068
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    |||| ||||||| ||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||| ||||||||||    
T  25869987 agcacaggatgaagttcattcgacattgattaaaacgtgtcacgatggctatttcgtgatacgattttaggaacatgtggca 25870068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 36809283 - 36809202
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    |||| |||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||| |||||    
T  36809283 agcacaggatgagattcattcgacattggttaaaacgtgtcacgatggctattttgtgacacgattttaggaacatttggca 36809202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 30275535 - 30275472
Alignment:
Q  13 taggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgatttta 77  Q
    ||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  30275535 taggatgag-ttcattcgacattggttaaaacgtgtcacgatggttatttcgtgacacgatttta 30275472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 25139881 - 25139818
Alignment:
Q  16 gatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagg 79  Q
    ||||||||||||| |||||| ||||||||||||||| || ||||||||||||||||||||||||    
T  25139881 gatgaggttcattagacattagttaaaacgtgtcacaatggctatttcgtgacacgattttagg 25139818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 16788557 - 16788609
Alignment:
Q  26 attcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttag 78  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  16788557 attcgatattggttaaaacgtgtcacgatggctatttcgtgacacgattttag 16788609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 30925919 - 30925969
Alignment:
Q  25 cattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattt 75  Q
    ||||||||||||   ||||||||||||||| |||| |||||||||||||||    
T  30925919 cattcgacattgagcaaaacgtgtcacgatggctaattcgtgacacgattt 30925969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 5e-32; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 8276171 - 8276245
Alignment:
Q  16 gatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8276171 gatgaggttcattcgacattggttaaaacgtgtcacgatggctatttcgtgacacgattttagggacatgtggca 8276245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 45287983 - 45287904
Alignment:
Q  11 cataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  45287983 cataagatgaggttcattcgacattggttaaaacgtgtcacgatggctatttcgtgacacgattttaggaacatgtggca 45287904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 45291319 - 45291240
Alignment:
Q  11 cataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  45291319 catagaatgaggttcattcgacattggttaaaacgtgtcacgatggctatttcgtgacacgattttaggaacatgtggca 45291240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 10431538 - 10431619
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    |||| ||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  10431538 agcacaggatgaggttcactcgacattggctaaaacgtgtcacgatggctatttcgtgacacgattttagggacatgtggca 10431619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 26556669 - 26556743
Alignment:
Q  16 gatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  26556669 gatgaggtttattcgacattggttaaaacgtgtcacgatggctatttcatgacacgattttagggacatgtggca 26556743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 2442125 - 2442045
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    ||||||||||||| |||| |||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  2442125 agcataggatgag-ttcactcgacattggctaaaacgtatcacgatggctatttcgtgacacgattttagggacatgtggca 2442045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 4542226 - 4542306
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||| | ||||||||||||| |||||||| ||||||||||    
T  4542226 agcataggatgag-ttcattcgacattggttaaaacttgtcacgatggatatttcgtgacacaattttaggaacatgtggca 4542306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 64; Significance: 7e-28; HSPs: 3)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 901 - 826
Alignment:
Q  15 ggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  901 ggataaggttcattcgacattggttaaaacgtgtcacgatggctatttcgtgacacgattttaggaacatgtggca 826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 4261 - 4186
Alignment:
Q  15 ggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  4261 ggataaggttcattcgacattggttaaaacgtgtcacgatggctatttcgtgacacgattttaggaacatgtggca 4186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 11391 - 11316
Alignment:
Q  15 ggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  11391 ggataaggttcattcgacattggttaaaacgtgtcacgatggctatttcgtgacacgattttaggaacatgtggca 11316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 7e-28; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 43682640 - 43682569
Alignment:
Q  14 aggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatg 85  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  43682640 aggatgaggttcattcgacattggttaaaacgtgtcacgacggctatttcgtgacacgattttagggacatg 43682569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 45156766 - 45156685
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    |||| ||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||| ||||||||||    
T  45156766 agcacaggatgaggttcattcgacattgattaaaacgtgtcacaatggctatttcgtgacacgattttaggaacatgtggca 45156685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 17895358 - 17895295
Alignment:
Q  16 gatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagg 79  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17895358 gatgaggttcattcgacattggttaaaacgtgtcacgatggctatttcgtgacacgattttagg 17895295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 25595525 - 25595455
Alignment:
Q  16 gatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgt 86  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||    
T  25595525 gatgaggttcattcgacattggttaaaacgtgtcacgatgactatttcgtgacacgattttaggaacatgt 25595455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 33878078 - 33878009
Alignment:
Q  17 atgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgt 86  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  33878078 atgaggtttattcgacattggttaaaacgtgtcacgatggctatttcgtgacacgattttaggaacatgt 33878009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 20520109 - 20520173
Alignment:
Q  14 aggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttag 78  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  20520109 aggatgaggttcattcgacattggttaaaacgtgtcacaatggctatttcgtgacacgattttag 20520173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 25228171 - 25228246
Alignment:
Q  16 gatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggcat 91  Q
    ||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||| || ||||||    
T  25228171 gatgaggttcattcgacattggttaaaacgtgttacgatggttatttcgtgacacgattttagggatatatggcat 25228246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 5540843 - 5540773
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagg 79  Q
    |||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||    
T  5540843 agcacaggatgaggttcattcgacattggttaaaacgtgtcacgatgactatttcgtgacatgattttagg 5540773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 25592340 - 25592270
Alignment:
Q  16 gatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgt 86  Q
    ||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||| ||||||    
T  25592340 gatgaggttcattcgacattggttaaaacgtgttacgatgactatttcgtgacacgattttaggaacatgt 25592270  T

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Target: chr8; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 10663171 - 10663233
Alignment:
Q  17 atgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagg 79  Q
    |||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  10663171 atgaggttcaatcgacattggttaaaacgtgtcacgatggatatttcgtgacacgattttagg 10663233  T

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Target: chr8; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 18722151 - 18722081
Alignment:
Q  16 gatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgt 86  Q
    |||||||||||||||| || |||||||||||||||||||  ||||||||||||||||||||||| ||||||    
T  18722151 gatgaggttcattcgatatcggttaaaacgtgtcacgatgactatttcgtgacacgattttaggaacatgt 18722081  T

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Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 23612745 - 23612801
Alignment:
Q  23 ttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagg 79  Q
    |||||||||||||| |||||||||||||| || ||||||||||||||||||||||||    
T  23612745 ttcattcgacattgtttaaaacgtgtcacaatggctatttcgtgacacgattttagg 23612801  T

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Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 14421021 - 14421068
Alignment:
Q  14 aggatgaggttcattcgacattggttaaaacgtgtcacgatagctatt 61  Q
    ||||||||||||| || ||||||| ||||||||| |||||||||||||    
T  14421021 aggatgaggttcactcaacattggctaaaacgtgacacgatagctatt 14421068  T

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Target: scaffold0080 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 26397 - 26478
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||| ||||    
T  26397 agcacaggatgaggttcattcgacattggttaaaacgtgtcacgatggctatttcgtaacacggttttagggacatggggca 26478  T

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Target: scaffold0015 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 197383 - 197464
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    |||| ||||||||||||||||||||||| |||||| |||||||||| |||||||| ||||||||||||||||||||||||||    
T  197383 agcacaggatgaggttcattcgacattgattaaaatgtgtcacgatggctatttcatgacacgattttagggacatgtggca 197464  T

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Target: scaffold0005 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 291115 - 291196
Alignment:
Q  9 agcataggatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagggacatgtggca 90  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||    
T  291115 agcacaggataaggttcattcgacattggttaaaacgtgtcacgatgactatttcgtaacacgattttagggacatgtggca 291196  T

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Target: scaffold0035 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 61756 - 61819
Alignment:
Q  16 gatgaggttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagg 79  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  61756 gatgaggttcattcgacattggttaaaacgtgtcacgatggctatttcgtgacacgattttagg 61819  T

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Target: scaffold0381 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 6387 - 6331
Alignment:
Q  23 ttcattcgacattggttaaaacgtgtcacgatagctatttcgtgacacgattttagg 79  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6387 ttcattcgacattggttaaaacgtgtcacgatggctatttcgtgacacgattttagg 6331  T

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