View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6041_high_3 (Length: 409)
Name: NF6041_high_3
Description: NF6041
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6041_high_3 |
 | |
|
| [»] scaffold0390 (1 HSPs) |
| | |
|
| [»] scaffold0203 (1 HSPs) |
| | |
|
| [»] scaffold1679 (1 HSPs) |
| | |
|
| [»] scaffold0657 (2 HSPs) |
| | |
|
| [»] scaffold0705 (1 HSPs) |
| | |
|
| [»] scaffold0008 (1 HSPs) |
| | |
|
| [»] scaffold0234 (6 HSPs) |
| | |
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Alignment Details
Target: scaffold0390 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: scaffold0390
Description:
Target: scaffold0390; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 14 - 252
Target Start/End: Complemental strand, 11914 - 11676
Alignment:
| Q |
14 |
agatccggttgttcatgctaaacaaacaattctagaaactatttatgtttaattaatttattcaattggagaaaggtagtaaatttaaaatatgatgatt |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11914 |
agatccggttgttcatgctaaacaaacaatcctagaaactatttatgtttaattaatttattcaattggagaaaggtagtaaatttaaaatatgatgatt |
11815 |
T |
|
| Q |
114 |
ttgaaagagtttcaatatcatatatgattttgaatttagtaataaaatatttgcttaattttggcaccataatttgttttggaaacaaattggtcaccca |
213 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11814 |
ttgaaagagtttcaatatcatatatgattttgaatttagtaataaaatatttgcttaattttggcaccataatttgttttggaaacaaattggtcaccca |
11715 |
T |
|
| Q |
214 |
aataatgcatatttaattataataattattgagtgtcaa |
252 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11714 |
aataatgcatatttaattataataattattgagtgtcaa |
11676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 235; Significance: 1e-130; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 14 - 252
Target Start/End: Complemental strand, 17689456 - 17689218
Alignment:
| Q |
14 |
agatccggttgttcatgctaaacaaacaattctagaaactatttatgtttaattaatttattcaattggagaaaggtagtaaatttaaaatatgatgatt |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
17689456 |
agatccggttgttcatgctaaacaaacaatcctagaaactatttatgtttaattaatttattcaattggagaaaggtagtaaatttaaaatatgatgatt |
17689357 |
T |
|
| Q |
114 |
ttgaaagagtttcaatatcatatatgattttgaatttagtaataaaatatttgcttaattttggcaccataatttgttttggaaacaaattggtcaccca |
213 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17689356 |
ttgaaagagtttcaatatcatatatgattttgaatttagtaataaaatatttgcttaattttggcaccataatttgttttggaaacaaattggtcaccca |
17689257 |
T |
|
| Q |
214 |
aataatgcatatttaattataataattattgagtgtcaa |
252 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17689256 |
aataatgcatatttaattataataattattgagtgtcaa |
17689218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 14 - 252
Target Start/End: Original strand, 27273974 - 27274212
Alignment:
| Q |
14 |
agatccggttgttcatgctaaacaaacaattctagaaactatttatgtttaattaatttattcaattggagaaaggtagtaaatttaaaatatgatgatt |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27273974 |
agatccggttgttcatgctaaacaaacaatcctagaaactatttatgtttaattaatttattcaattggagaaaggtagtaaatttaaaatatgatgatt |
27274073 |
T |
|
| Q |
114 |
ttgaaagagtttcaatatcatatatgattttgaatttagtaataaaatatttgcttaattttggcaccataatttgttttggaaacaaattggtcaccca |
213 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27274074 |
ttgaaagagtttcaatatcatatatgattttgaatttagtaataaaatatttgcttaattttggcaccataatttgttttggaaacaaattggtcaccca |
27274173 |
T |
|
| Q |
214 |
aataatgcatatttaattataataattattgagtgtcaa |
252 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27274174 |
aataatgcatatttaattataataattattgagtgtcaa |
27274212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 14 - 252
Target Start/End: Original strand, 27298850 - 27299087
Alignment:
| Q |
14 |
agatccggttgttcatgctaaacaaacaattctagaaactatttatgtttaattaatttattcaattggagaaaggtagtaaatttaaaatatgatgatt |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27298850 |
agatccggttgttcatgctaaacaaacaatcctagaaactatttatgtttaattaatttattcaattggagaaaggtagtaaatttaaaatatgatgatt |
27298949 |
T |
|
| Q |
114 |
ttgaaagagtttcaatatcatatatgattttgaatttagtaataaaatatttgcttaattttggcaccataatttgttttggaaacaaattggtcaccca |
213 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
27298950 |
ttgaaagagtttcaatatcatatatgattttgaatttagtaataaaatatttgcttaattttggcaccataatttgtttt-gaaacaaattggtcaccca |
27299048 |
T |
|
| Q |
214 |
aataatgcatatttaattataataattattgagtgtcaa |
252 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27299049 |
aataatgcatatttaattataataattattgagtgtcaa |
27299087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 14 - 252
Target Start/End: Original strand, 29311125 - 29311363
Alignment:
| Q |
14 |
agatccggttgttcatgctaaacaaacaattctagaaactatttatgtttaattaatttattcaattggagaaaggtagtaaatttaaaatatgatgatt |
113 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||| |||||||||||||||||||| || |||||| |
|
|
| T |
29311125 |
agatccggttgttcatgctaaacaaacaattcttgaaattatttat-tttaattaatttattcaattggtgaaaggtagtaaatttaaaagatcatgatt |
29311223 |
T |
|
| Q |
114 |
ttgaaagagtttcaatatcatatatgatttt-gaatttagtaataaaatatttgcttaattttggcaccataatttgttttggaaacaaattggtcaccc |
212 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||| |||| |||||||||||||| || |
|
|
| T |
29311224 |
ttgaaagagtttcaatatcatatatgatttttgaatttggtaataaaatatttgcttaattttagcaccataatttatttttgaaacaaattggtcgcct |
29311323 |
T |
|
| Q |
213 |
aaataatgcatatttaattataataattattgagtgtcaa |
252 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
29311324 |
aaataatgcatatttaaatataataattattgagtgtcaa |
29311363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 235; Significance: 1e-130; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 14 - 252
Target Start/End: Original strand, 13243867 - 13244105
Alignment:
| Q |
14 |
agatccggttgttcatgctaaacaaacaattctagaaactatttatgtttaattaatttattcaattggagaaaggtagtaaatttaaaatatgatgatt |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13243867 |
agatccggttgttcatgctaaacaaacaatcctagaaactatttatgtttaattaatttattcaattggagaaaggtagtaaatttaaaatatgatgatt |
13243966 |
T |
|
| Q |
114 |
ttgaaagagtttcaatatcatatatgattttgaatttagtaataaaatatttgcttaattttggcaccataatttgttttggaaacaaattggtcaccca |
213 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13243967 |
ttgaaagagtttcaatatcatatatgattttgaatttagtaataaaatatttgcttaattttggcaccataatttgttttggaaacaaattggtcaccca |
13244066 |
T |
|
| Q |
214 |
aataatgcatatttaattataataattattgagtgtcaa |
252 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13244067 |
aataatgcatatttaattataataattattgagtgtcaa |
13244105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 14 - 252
Target Start/End: Complemental strand, 10577423 - 10577183
Alignment:
| Q |
14 |
agatccggttgttcatgctaaacaaacaattctagaaactatttatgtttaattaatttattcaattggagaaaggtagtaaatttaaaatatgatgatt |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| || |||||| |
|
|
| T |
10577423 |
agatccggttgttcatgctaaacaaacaatccttgaaactatttatgtttaatttatttatttaattggagaaaggtagtaaatttaaaagatcatgatt |
10577324 |
T |
|
| Q |
114 |
ttgaaagagtttcaatatcatatatga--ttttgaatttagtaataaaatatttgcttaattttggcaccataatttgttttggaaacaaattggtcacc |
211 |
Q |
| |
|
||||||||||||||| |||| || ||| |||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||||| | |
|
|
| T |
10577323 |
ttgaaagagtttcaacatcagatgtgactttttgaatttggtaataaattatttgcttaattttagcactgtaatttgttttggaaacaaattggtcgtc |
10577224 |
T |
|
| Q |
212 |
caaataatgcatatttaattataataattattgagtgtcaa |
252 |
Q |
| |
|
|||||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
10577223 |
taaataaagcatatttaattataataattgttgagtgtcaa |
10577183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 249 - 390
Target Start/End: Complemental strand, 15356201 - 15356060
Alignment:
| Q |
249 |
tcaaattttgaattcgatctatgtattgactttttgtatgggaacgtgatcttttgtgtgattatttgatgaatgaaaagcttgagtactgagtaattcc |
348 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15356201 |
tcaaattttgaattcgatctatgtattgactttttgtatgggaacgtgatcttttgtgtgattatttgatgaatgaaaagcttgagtactgagtaattcc |
15356102 |
T |
|
| Q |
349 |
caaaaggttcatacgatcacgatacagtacaggaccaattct |
390 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15356101 |
caaaaggttcatacgatcacgatacagtacaggaccaattct |
15356060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 141
Target Start/End: Complemental strand, 10577075 - 10577042
Alignment:
| Q |
108 |
atgattttgaaagagtttcaatatcatatatgat |
141 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| |
|
|
| T |
10577075 |
atgattttgaaaaagtttcaatatcatatatgat |
10577042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 223; Significance: 1e-122; HSPs: 10)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 14 - 252
Target Start/End: Original strand, 26965696 - 26965934
Alignment:
| Q |
14 |
agatccggttgttcatgctaaacaaacaattctagaaactatttatgtttaattaatttattcaattggagaaaggtagtaaatttaaaatatgatgatt |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
26965696 |
agatccggttgttcatgctaaacaaacaatcctagaaactatttatgtttaattaatttattcaattggagaaatgtagtaaatttaaaatatgatgatt |
26965795 |
T |
|
| Q |
114 |
ttgaaagagtttcaatatcatatatgattttgaatttagtaataaaatatttgcttaattttggcaccataatttgttttggaaacaaattggtcaccca |
213 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26965796 |
ttgaaagagtttcaatatcatatatgattttgaatttagtaataaaatatttgattaattttggcaccataatttgttttggaaacaaattggtcaccca |
26965895 |
T |
|
| Q |
214 |
aataatgcatatttaattataataattattgagtgtcaa |
252 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
26965896 |
aataatgcatatttaattataataattattgagggtcaa |
26965934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 14 - 252
Target Start/End: Complemental strand, 19924686 - 19924448
Alignment:
| Q |
14 |
agatccggttgttcatgctaaacaaacaattctagaaactatttatgtttaattaatttattcaattggagaaaggtagtaaatttaaaatatgatgatt |
113 |
Q |
| |
|
|||||||||||||||| |||||||| ||||||| |||| ||||||| |||||||||||||||||||||| |||||||||||||||||||| || |||||| |
|
|
| T |
19924686 |
agatccggttgttcattctaaacaagcaattcttgaaattatttat-tttaattaatttattcaattggtgaaaggtagtaaatttaaaagatcatgatt |
19924588 |
T |
|
| Q |
114 |
ttgaaagagtttcaatatcatatatgatttt-gaatttagtaataaaatatttgcttaattttggcaccataatttgttttggaaacaaattggtcaccc |
212 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| || |
|
|
| T |
19924587 |
ttgaaagagtttcaatatcatatatgatttttgaatttggtaataaaatatttgcttaattttagcaccataatttattttggaaacaaattggtcgcct |
19924488 |
T |
|
| Q |
213 |
aaataatgcatatttaattataataattattgagtgtcaa |
252 |
Q |
| |
|
|||||| ||||||||||||| ||||||||||||||||||| |
|
|
| T |
19924487 |
aaataaagcatatttaattaaaataattattgagtgtcaa |
19924448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 14 - 252
Target Start/End: Original strand, 5709559 - 5709797
Alignment:
| Q |
14 |
agatccggttgttcatgctaaacaaacaattctagaaactatttatgtttaattaatttattcaattggagaaaggtagtaaatttaaaatatgatgatt |
113 |
Q |
| |
|
|||||||||||||||| |||||||| ||||||| ||| |||||| | |||||||||||||||||||| |||||||||||||||||||| || |||||| |
|
|
| T |
5709559 |
agatccggttgttcattctaaacaagcaattcttgaattaatttat-tctaattaatttattcaattggtgaaaggtagtaaatttaaaagatcatgatt |
5709657 |
T |
|
| Q |
114 |
ttgaaagagtttcaatatcatatatgatttt-gaatttagtaataaaatatttgcttaattttggcaccataatttgttttggaaacaaattggtcaccc |
212 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| || |
|
|
| T |
5709658 |
ttgaaagagtttcaatatcagatatgatttttgaatttggtaataaaatatttgcttaattttagcaccataatttattttggaaacaaattggtcgcct |
5709757 |
T |
|
| Q |
213 |
aaataatgcatatttaattataataattattgagtgtcaa |
252 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
5709758 |
aaataaagcatatttaattataataattattgagtgtcaa |
5709797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 14 - 252
Target Start/End: Complemental strand, 10626267 - 10626027
Alignment:
| Q |
14 |
agatccggttgttcatgctaaacaaacaattctagaaactatttatgtttaattaatttattcaattggagaaaggtagtaaatttaaaatatgatgatt |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||| |
|
|
| T |
10626267 |
agatccggttgttcatgctaaacaaacaatccttgaaactatttatgtttaattaatttatttaattggagaaaggtagtaaatttaaaagatcatgatt |
10626168 |
T |
|
| Q |
114 |
ttgaaagagtttcaatatcatatatga--ttttgaatttagtaataaaatatttgcttaattttggcaccataatttgttttggaaacaaattggtcacc |
211 |
Q |
| |
|
||||||||||||||| |||| || ||| |||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||||| | |
|
|
| T |
10626167 |
ttgaaagagtttcaacatcaaatgtgactttttgaatttggtaataaattatttgcttaattttagcactataatttgttttggaaacaaattggttgtc |
10626068 |
T |
|
| Q |
212 |
caaataatgcatatttaattataataattattgagtgtcaa |
252 |
Q |
| |
|
|||||| ||| ||||||||||||||||| ||||||||||| |
|
|
| T |
10626067 |
taaataaagcagatttaattataataattgttgagtgtcaa |
10626027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 108 - 252
Target Start/End: Original strand, 18264521 - 18264666
Alignment:
| Q |
108 |
atgattttgaaagagtttcaatatcatatatgatttt-gaatttagtaataaaatatttgcttaattttggcaccataatttgttttggaaacaaattgg |
206 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||||| |||||| |||||||||||| ||||| || | | ||||||||||||||| |||||||||||| |
|
|
| T |
18264521 |
atgattttgaaagagtttcaatattagatatgatttttgaatttgataataaaatattggcttagttatagtaccataatttgtttttgaaacaaattgg |
18264620 |
T |
|
| Q |
207 |
tcacccaaataatgcatatttaattataataattattgagtgtcaa |
252 |
Q |
| |
|
|| ||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
18264621 |
tcgcccaaataaagcatatttaattataataattattgagtgtcaa |
18264666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 14 - 144
Target Start/End: Original strand, 18264327 - 18264457
Alignment:
| Q |
14 |
agatccggttgttcatgctaaacaaacaattctagaaactatttatgtttaattaatttattcaattggagaaaggtagtaaatttaaaatatgatgatt |
113 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| |||| | ||||| |||||||||||||||||||| | |||||||||||||||||||| || ||||| |
|
|
| T |
18264327 |
agatccgattgttcatgctaaacaaacaattcttgaaattgtttatttttaattaatttattcaatttgtgaaaggtagtaaatttaaaagatcgtgatt |
18264426 |
T |
|
| Q |
114 |
ttgaaagagtttcaatatcatatatgatttt |
144 |
Q |
| |
|
||||||| |||||||||||| |||||||||| |
|
|
| T |
18264427 |
ttgaaagggtttcaatatcagatatgatttt |
18264457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 144
Target Start/End: Original strand, 5709990 - 5710026
Alignment:
| Q |
108 |
atgattttgaaagagtttcaatatcatatatgatttt |
144 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||| |
|
|
| T |
5709990 |
atgattttgaaagagtttcaatatcagatatgatttt |
5710026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 141
Target Start/End: Complemental strand, 10625918 - 10625885
Alignment:
| Q |
108 |
atgattttgaaagagtttcaatatcatatatgat |
141 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| |
|
|
| T |
10625918 |
atgattttgaaaaagtttcaatatcatatatgat |
10625885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 141
Target Start/End: Original strand, 18264773 - 18264806
Alignment:
| Q |
108 |
atgattttgaaagagtttcaatatcatatatgat |
141 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| |
|
|
| T |
18264773 |
atgattttgaaaaagtttcaatatcatatatgat |
18264806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 141
Target Start/End: Complemental strand, 19924263 - 19924230
Alignment:
| Q |
108 |
atgattttgaaagagtttcaatatcatatatgat |
141 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| |
|
|
| T |
19924263 |
atgattttgaaagagtttcaatatcagatatgat |
19924230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0203 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: scaffold0203
Description:
Target: scaffold0203; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 14 - 252
Target Start/End: Complemental strand, 28208 - 27970
Alignment:
| Q |
14 |
agatccggttgttcatgctaaacaaacaattctagaaactatttatgtttaattaatttattcaattggagaaaggtagtaaatttaaaatatgatgatt |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |
|
|
| T |
28208 |
agatccggttgttcatgctaaacaaacaatccttgaaactatttatgtttaattaatttattcaatttgtgaaaggtagtaaatttaaaatatgatgatt |
28109 |
T |
|
| Q |
114 |
ttgaaagagtttcaatatcatatatgattttgaatttagtaataaaatatttgcttaattttggcaccataatttgttttggaaacaaattggtcaccca |
213 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28108 |
ttgaaatagtttcaatatcatatatgattttgaatttggtaataaaatatttgcttaattttagcaccataatttgttttggaaacaaattggtcaccca |
28009 |
T |
|
| Q |
214 |
aataatgcatatttaattataataattattgagtgtcaa |
252 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28008 |
aataatgcatatttaattataataattattgagtgtcaa |
27970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 14 - 252
Target Start/End: Original strand, 18254201 - 18254440
Alignment:
| Q |
14 |
agatccggttgttcatgctaaacaaacaattctagaaactatttatgtttaattaatttattcaattggagaaaggtagtaaatttaaaatatgatgatt |
113 |
Q |
| |
|
||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
18254201 |
agatccgattgttcatgctaaacaaacaatccttgaaactatttatgtttaattaatttattcaaatggagaaaggtagtaaatttaaaatatgatgatt |
18254300 |
T |
|
| Q |
114 |
ttgaaagag-tttcaatatcatatatgattttgaatttagtaataaaatatttgcttaattttggcaccataatttgttttggaaacaaattggtcaccc |
212 |
Q |
| |
|
|||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |
|
|
| T |
18254301 |
ttgaaaaaggtttcaatatcatatatgattttgaatttggtaataaaatatttgcttaattttagcatcataatttgttttggaaacaaattggtcaccc |
18254400 |
T |
|
| Q |
213 |
aaataatgcatatttaattataataattattgagtgtcaa |
252 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18254401 |
aaataatgcatatttaattataataattattgagtgtcaa |
18254440 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 191; Significance: 1e-103; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 14 - 252
Target Start/End: Complemental strand, 11541005 - 11540768
Alignment:
| Q |
14 |
agatccggttgttcatgctaaacaaacaattctagaaactatttatgtttaattaatttattcaattggagaaaggtagtaaatttaaaatatgatgatt |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
11541005 |
agatccggttgttcatgctaaacaaacaatccttgaaactatt-atgtttaattaatttattcaattgaagaaaggtagtaaatttaaaatatgatgatt |
11540907 |
T |
|
| Q |
114 |
ttgaaagagtttcaatatcatatatgattttgaatttagtaataaaatatttgcttaattttggcaccataatttgttttggaaacaaattggtcaccca |
213 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |
|
|
| T |
11540906 |
ttgaaaaggtttcaatatcatatatgattttgaatttggtaataaaatatttgcttaattttagcaccataatttgttttggaaacaaattggtcacaca |
11540807 |
T |
|
| Q |
214 |
aataatgcatatttaattataataattattgagtgtcaa |
252 |
Q |
| |
|
||||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
11540806 |
aataaagcagatttaattataataattattgagtgtcaa |
11540768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 95 - 141
Target Start/End: Complemental strand, 11540590 - 11540543
Alignment:
| Q |
95 |
aatttaaaat-atgatgattttgaaagagtttcaatatcatatatgat |
141 |
Q |
| |
|
|||||||||| || |||||||||||||||||||||||||| ||||||| |
|
|
| T |
11540590 |
aatttaaaatgatcatgattttgaaagagtttcaatatcagatatgat |
11540543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 11540680 - 11540618
Alignment:
| Q |
90 |
tagtaaatttaaaatatgatgattttgaaagagtttcaatatcatatatg--attttgaattta |
151 |
Q |
| |
|
||||||||||||||||| |||| ||||||| |||||||| ||||||||| |||||||||||| |
|
|
| T |
11540680 |
tagtaaatttaaaatatcatga-tttgaaatagtttcaaggtcatatatgatattttgaattta |
11540618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 180; Significance: 4e-97; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 14 - 252
Target Start/End: Original strand, 24637864 - 24638102
Alignment:
| Q |
14 |
agatccggttgttcatgctaaacaaacaattctagaaactatttatgtttaattaatttattcaattggagaaaggtagtaaatttaaaatatgatgatt |
113 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||| |||||||||||||||||||| || |||||| |
|
|
| T |
24637864 |
agatccggttgttcatgctaaacaaacaattcttgaaattatttat-tttaattaatttattcaattggtgaaaggtagtaaatttaaaagatcatgatt |
24637962 |
T |
|
| Q |
114 |
ttgaaagagtttcaatatcatatatgatttt-gaatttagtaataaaatatttgcttaattttggcaccataatttgttttggaaacaaattggtcaccc |
212 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| | |||||||||| ||||||||||||||||||| || |
|
|
| T |
24637963 |
ttgaaagagtttcaatatcatatatgatttttgaatttggtaataaaatatttgcttaattttagtaccataatttattttggaaacaaattggtcgcct |
24638062 |
T |
|
| Q |
213 |
aaataatgcatatttaattataataattattgagtgtcaa |
252 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24638063 |
aaataatgcatatttaattataataattattgagtgtcaa |
24638102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 14 - 144
Target Start/End: Original strand, 22108013 - 22108142
Alignment:
| Q |
14 |
agatccggttgttcatgctaaacaaacaattctagaaactatttatgtttaattaatttattcaattggagaaaggtagtaaatttaaaatatgatgatt |
113 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||||||||| |||||||||||||||||||| || ||||| |
|
|
| T |
22108013 |
agatccggttgttcatgctaaacaagcaattcttgaaattatttat-tttaattaatttattcaattggtgaaaggtagtaaatttaaaagatcgtgatt |
22108111 |
T |
|
| Q |
114 |
ttgaaagagtttcaatatcatatatgatttt |
144 |
Q |
| |
|
||||||| |||||||||||| |||||||||| |
|
|
| T |
22108112 |
ttgaaagggtttcaatatcagatatgatttt |
22108142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 108 - 252
Target Start/End: Original strand, 22108206 - 22108351
Alignment:
| Q |
108 |
atgattttgaaagagtttcaatatcatatatgatttt-gaatttagtaataaaatatttgcttaattttggcaccataatttgttttggaaacaaattgg |
206 |
Q |
| |
|
|||||||||||| ||||||||||| | |||||||||| |||||| ||||||||||||| ||||| || | | ||||||||||||||| |||||||||||| |
|
|
| T |
22108206 |
atgattttgaaaaagtttcaatattagatatgatttttgaatttggtaataaaatattggcttagttatagtaccataatttgtttttgaaacaaattgg |
22108305 |
T |
|
| Q |
207 |
tcacccaaataatgcatatttaattataataattattgagtgtcaa |
252 |
Q |
| |
|
|| ||||||||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
22108306 |
tcgcccaaataaagcagatttaattataataattattgagtgtcaa |
22108351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1679 (Bit Score: 154; Significance: 1e-81; HSPs: 1)
Name: scaffold1679
Description:
Target: scaffold1679; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 14 - 252
Target Start/End: Original strand, 797 - 1036
Alignment:
| Q |
14 |
agatccggttgttcatgctaaacaaacaattctagaaactatttatgtttaattaatttattcaattggagaaaggtagtaaatttaaaatatgatgatt |
113 |
Q |
| |
|
||||||||||||||||||||||||| ||| | | |||| ||||||| ||||||| |||||||||||||||||||||||||||| |||||| || |||||| |
|
|
| T |
797 |
agatccggttgttcatgctaaacaagcaaattttgaaattatttat-tttaatttatttattcaattggagaaaggtagtaaaattaaaagatcatgatt |
895 |
T |
|
| Q |
114 |
ttgaaagagtttcaatatcatatatgatttt--gaatttagtaataaaatatttgcttaattttggcaccataatttgttttggaaacaaattggtcacc |
211 |
Q |
| |
|
||||||| |||||||||||| |||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| || |
|
|
| T |
896 |
ttgaaagggtttcaatatcagatatgattttttgaattttgtaataaaatatttgcttaattttagcaccataatttgttttagaaacaaattggtcgcc |
995 |
T |
|
| Q |
212 |
caaataatgcatatttaattataataattattgagtgtcaa |
252 |
Q |
| |
|
||||||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
996 |
caaataaagcagatttaattataataattattgagtgtcaa |
1036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0657 (Bit Score: 154; Significance: 1e-81; HSPs: 2)
Name: scaffold0657
Description:
Target: scaffold0657; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 14 - 252
Target Start/End: Original strand, 4932 - 5172
Alignment:
| Q |
14 |
agatccggttgttcatgctaaacaaacaattctagaaactatttatgtttaattaatttattcaattggagaaaggtagtaaatttaaaatatgatgatt |
113 |
Q |
| |
|
||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||| |
|
|
| T |
4932 |
agatctggttgttcatgctaaacaaacaatccttcaaactatttatgtttaattaatttattcaattggagataggtagtaaatttaaaagatcatgatt |
5031 |
T |
|
| Q |
114 |
ttgaaagagtttcaatatcatatatga--ttttgaatttagtaataaaatatttgcttaattttggcaccataatttgttttggaaacaaattggtcacc |
211 |
Q |
| |
|
||||||||||||||||||| || ||| |||||||||| ||||||||||||| |||||||| | | ||||||||||||||| |||||||||||||| || |
|
|
| T |
5032 |
ttgaaagagtttcaatatcggatgtgactttttgaatttggtaataaaatattggcttaattatagtaccataatttgtttttgaaacaaattggtcgcc |
5131 |
T |
|
| Q |
212 |
caaataatgcatatttaattataataattattgagtgtcaa |
252 |
Q |
| |
|
||||||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
5132 |
caaataaagcagatttaattataataattattgagtgtcaa |
5172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0657; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 141
Target Start/End: Original strand, 5279 - 5312
Alignment:
| Q |
108 |
atgattttgaaagagtttcaatatcatatatgat |
141 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| |
|
|
| T |
5279 |
atgattttgaaaaagtttcaatatcatatatgat |
5312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 146; Significance: 9e-77; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 14 - 252
Target Start/End: Complemental strand, 19712188 - 19711949
Alignment:
| Q |
14 |
agatccggttgttcatgctaaacaaacaattctagaaactatttatgtttaattaatttattcaattggagaaaggtagtaaatttaaaatatgatgatt |
113 |
Q |
| |
|
||||| || |||||||||||||||||||||| | |||| ||||||| ||||||||||||||||||||||||||||||| |||| |||||| || |||||| |
|
|
| T |
19712188 |
agatctggctgttcatgctaaacaaacaatttttgaaattatttatttttaattaatttattcaattggagaaaggtaataaaattaaaagatcatgatt |
19712089 |
T |
|
| Q |
114 |
ttgaaagagtttcaatatcatatatga--ttttgaatttagtaataaaatatttgcttaattttggcaccataatttgttttggaaacaaattggtcacc |
211 |
Q |
| |
|
||||||| |||||||||||| |||||| |||||||||| ||||| |||||||| ||||||||| |||||||||||||||||||| ||||||||||| || |
|
|
| T |
19712088 |
ttgaaagggtttcaatatcagatatgattttttgaattttgtaat-aaatattttcttaattttagcaccataatttgttttggagacaaattggtcgcc |
19711990 |
T |
|
| Q |
212 |
caaataatgcatatttaattataataattattgagtgtcaa |
252 |
Q |
| |
|
||||||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
19711989 |
caaataaagcagatttaattataataattattgagtgtcaa |
19711949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0705 (Bit Score: 142; Significance: 2e-74; HSPs: 1)
Name: scaffold0705
Description:
Target: scaffold0705; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 249 - 390
Target Start/End: Complemental strand, 7254 - 7113
Alignment:
| Q |
249 |
tcaaattttgaattcgatctatgtattgactttttgtatgggaacgtgatcttttgtgtgattatttgatgaatgaaaagcttgagtactgagtaattcc |
348 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7254 |
tcaaattttgaattcgatctatgtattgactttttgtatgggaacgtgatcttttgtgtgattatttgatgaatgaaaagcttgagtactgagtaattcc |
7155 |
T |
|
| Q |
349 |
caaaaggttcatacgatcacgatacagtacaggaccaattct |
390 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7154 |
caaaaggttcatacgatcacgatacagtacaggaccaattct |
7113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0008 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0008
Description:
Target: scaffold0008; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 14 - 252
Target Start/End: Complemental strand, 228427 - 228204
Alignment:
| Q |
14 |
agatccggttgttcatgctaaacaaacaattctagaaactatttatgtttaattaatttattcaattggagaaaggtagtaaatttaaaatatgatgatt |
113 |
Q |
| |
|
||||||||||||||||||||| |||||||| || ||| |||| |||||||||||||||||||||||||||||| |||||||||||||| || |||||| |
|
|
| T |
228427 |
agatccggttgttcatgctaagcaaacaatccttcaaattattaatgtttaattaatttattcaattggagaaatttagtaaatttaaaagatcatgatt |
228328 |
T |
|
| Q |
114 |
ttgaaagagtttcaatatcatatatga--ttttgaatttagtaataaaatatttgcttaattttggcaccataatttgttttggaaacaaattggtcacc |
211 |
Q |
| |
|
|||||||||||||||||||| || ||| |||||||||| ||||||||||||||| | | ||||||||| |||||||||||| || |
|
|
| T |
228327 |
ttgaaagagtttcaatatcaaatgtgactttttgaatttggtaataaaatatttg----------------tcacttgttttgg-aacaaattggtcgcc |
228245 |
T |
|
| Q |
212 |
caaataatgcatatttaattataataattattgagtgtcaa |
252 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
228244 |
taaataatgcatatgtaattataataattattgagtgtcaa |
228204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0234 (Bit Score: 90; Significance: 2e-43; HSPs: 6)
Name: scaffold0234
Description:
Target: scaffold0234; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 108 - 252
Target Start/End: Complemental strand, 9111 - 8966
Alignment:
| Q |
108 |
atgattttgaaagagtttcaatatcatatatgatttt-gaatttagtaataaaatatttgcttaattttggcaccataatttgttttggaaacaaattgg |
206 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||||| |||||| |||||||||||| ||||| || | | ||||||||||||||| |||||||||||| |
|
|
| T |
9111 |
atgattttgaaagagtttcaatattagatatgatttttgaatttgataataaaatattggcttagttatagtaccataatttgtttttgaaacaaattgg |
9012 |
T |
|
| Q |
207 |
tcacccaaataatgcatatttaattataataattattgagtgtcaa |
252 |
Q |
| |
|
|| ||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
9011 |
tcgcccaaataaagcatatttaattataataattattgagtgtcaa |
8966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0234; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 16154 - 16027
Alignment:
| Q |
17 |
tccggttgttcatgctaaacaaacaattctagaaactatttatgtttaattaatttattcaattggagaaaggtagtaaatttaaaatatgatgattttg |
116 |
Q |
| |
|
|||||||||||||||||||||| ||||||| |||| | ||||| |||||||||||||||||||| | ||||||||||||||||||||||| |||||||| |
|
|
| T |
16154 |
tccggttgttcatgctaaacaagcaattcttgaaattgtttatttttaattaatttattcaatttgtgaaaggtagtaaatttaaaatatcgtgattttg |
16055 |
T |
|
| Q |
117 |
aaagagtttcaatatcatatatgatttt |
144 |
Q |
| |
|
|||| ||||||||||||||||||||||| |
|
|
| T |
16054 |
aaagggtttcaatatcatatatgatttt |
16027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0234; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 14 - 144
Target Start/End: Complemental strand, 9305 - 9175
Alignment:
| Q |
14 |
agatccggttgttcatgctaaacaaacaattctagaaactatttatgtttaattaatttattcaattggagaaaggtagtaaatttaaaatatgatgatt |
113 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| |||| | ||||| |||||||||||||||||||| | |||||||||||||||||||| || ||||| |
|
|
| T |
9305 |
agatccgattgttcatgctaaacaaacaattcttgaaattgtttatttttaattaatttattcaatttgtgaaaggtagtaaatttaaaagatcgtgatt |
9206 |
T |
|
| Q |
114 |
ttgaaagagtttcaatatcatatatgatttt |
144 |
Q |
| |
|
||||||| |||||||||||| |||||||||| |
|
|
| T |
9205 |
ttgaaagggtttcaatatcagatatgatttt |
9175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0234; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 108 - 252
Target Start/End: Complemental strand, 15963 - 15817
Alignment:
| Q |
108 |
atgattttgaaagagtttcaatatcatatatgatttt-gaatttagtaataaaatatttgcttaattttggcaccataatttgttttggaaacaaattgg |
206 |
Q |
| |
|
||||||||||||||||||||| || | |||||||||| |||||| ||||||||||||| ||||| || | ||||||||||||||| |||||||||||| |
|
|
| T |
15963 |
atgattttgaaagagtttcaaaattagatatgatttttgaatttggtaataaaatattggcttagttacagtaccataatttgtttttgaaacaaattgg |
15864 |
T |
|
| Q |
207 |
tcacccaaataatgcata-tttaattataataattattgagtgtcaa |
252 |
Q |
| |
|
|| |||||| || ||| | ||| |||||||||||||||||||||||| |
|
|
| T |
15863 |
tcgcccaaagaaagcagattttgattataataattattgagtgtcaa |
15817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0234; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 141
Target Start/End: Complemental strand, 8859 - 8826
Alignment:
| Q |
108 |
atgattttgaaagagtttcaatatcatatatgat |
141 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| |
|
|
| T |
8859 |
atgattttgaaaaagtttcaatatcatatatgat |
8826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0234; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 141
Target Start/End: Complemental strand, 15710 - 15677
Alignment:
| Q |
108 |
atgattttgaaagagtttcaatatcatatatgat |
141 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| |
|
|
| T |
15710 |
atgattttgaaaaagtttcaatatcatatatgat |
15677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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