View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6041_low_8 (Length: 259)
Name: NF6041_low_8
Description: NF6041
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6041_low_8 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 242; Significance: 1e-134; HSPs: 9)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 11999867 - 11999618
Alignment:
| Q |
1 |
caaaggccaggagaagcagctatgtgctgaagaagtatcatctatggtactaacgaagatgcgagaaattgctgaggcatatttagaatcaccagtaaag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
11999867 |
caaaggccaggagaagcagctatgtgctgaagaagtatcatctatggtactaacgaagatgcgagaaattgctgaggcatatttagaatcaccggtaaag |
11999768 |
T |
|
| Q |
101 |
aatgttgttgttactgtaccagcttattttagtgattctcaacgaaaagccactatagatgccggtgcaattgctggcatcaatgttataagggtaatga |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11999767 |
aatgttgttgttactgtaccagcttattttagtgattctcaacgaaaagccactatagatgccggtgcaattgctggcatcaatgttataagggtaatga |
11999668 |
T |
|
| Q |
201 |
atgaacccactgctgcagctgttgcatatggccttgacaagagagctgat |
250 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
11999667 |
atgaacccactgctgcaactgttgcatatggccttgacaagagagctgat |
11999618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 12245101 - 12245350
Alignment:
| Q |
1 |
caaaggccaggagaagcagctatgtgctgaagaagtatcatctatggtactaacgaagatgcgagaaattgctgaggcatatttagaatcaccagtaaag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
12245101 |
caaaggccaggagaagcagctatgtgctgaagaagtatcatctatggtactaacaaagatgcgagaaattgctgaggcatatttagaatcaccggtaaag |
12245200 |
T |
|
| Q |
101 |
aatgttgttgttactgtaccagcttattttagtgattctcaacgaaaagccactatagatgccggtgcaattgctggcatcaatgttataagggtaatga |
200 |
Q |
| |
|
|||| ||||||||||||||| |||||||||||||||||||| |||||||| || |||||||| || |||||||||| |||||||||| |||||||||| |
|
|
| T |
12245201 |
aatgctgttgttactgtacctgcttattttagtgattctcagcgaaaagcaacgatagatgctggctcaattgctggtctcaatgttatgagggtaatga |
12245300 |
T |
|
| Q |
201 |
atgaacccactgctgcagctgttgcatatggccttgacaagagagctgat |
250 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
12245301 |
atgaacccactgctgcagctgttgcatatggccttgaaaagagagctgat |
12245350 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 25 - 250
Target Start/End: Complemental strand, 7542675 - 7542450
Alignment:
| Q |
25 |
tgctgaagaagtatcatctatggtactaacgaagatgcgagaaattgctgaggcatatttagaatcaccagtaaagaatgttgttgttactgtaccagct |
124 |
Q |
| |
|
||||||||| ||||||||||||||||| || ||||||||||||||||||||| | ||||||||| || | || | ||||| |||||||||||||| ||| |
|
|
| T |
7542675 |
tgctgaagaggtatcatctatggtactcacaaagatgcgagaaattgctgagtcgtatttagaaacaactgtgacgaatgcagttgttactgtacctgct |
7542576 |
T |
|
| Q |
125 |
tattttagtgattctcaacgaaaagccactatagatgccggtgcaattgctggcatcaatgttataagggtaatgaatgaacccactgctgcagctgttg |
224 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||| |||| |||||||||||| ||||| |||||||||| |
|
|
| T |
7542575 |
tattttaatgattctcaacgaaaagccactatagatgcgggtgccattgctggcctcaatgttatgagggcaatgaatgaacctactgccgcagctgttg |
7542476 |
T |
|
| Q |
225 |
catatggccttgacaagagagctgat |
250 |
Q |
| |
|
|||||||||||||||||||| ||||| |
|
|
| T |
7542475 |
catatggccttgacaagagaactgat |
7542450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 8 - 250
Target Start/End: Complemental strand, 14703874 - 14703632
Alignment:
| Q |
8 |
caggagaagcagctatgtgctgaagaagtatcatctatggtactaacgaagatgcgagaaattgctgaggcatatttagaatcaccagtaaagaatgttg |
107 |
Q |
| |
|
||||||||| |||| | ||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||| | || ||||||| | |
|
|
| T |
14703874 |
caggagaagaagctctatgccgaagaagtatcatctatggtactggtgaagatgcgagaaattgctgagacatatttagagtcaactgttaagaatgcag |
14703775 |
T |
|
| Q |
108 |
ttgttactgtaccagcttattttagtgattctcaacgaaaagccactatagatgccggtgcaattgctggcatcaatgttataagggtaatgaatgaacc |
207 |
Q |
| |
|
||||||| || || ||||||||||||||||||||| ||||||||||||| ||||| |||| ||||| ||| |||||||||| ||||||||||||||||| |
|
|
| T |
14703774 |
ttgttacggtgcctgcttattttagtgattctcaaagaaaagccactatggatgctggtgttattgccggcctcaatgttatgagggtaatgaatgaacc |
14703675 |
T |
|
| Q |
208 |
cactgctgcagctgttgcatatggccttgacaagagagctgat |
250 |
Q |
| |
|
|| ||||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
14703674 |
tacagctgcagctattgcatatggccttgacaagagaactgat |
14703632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 11 - 250
Target Start/End: Complemental strand, 12235152 - 12234913
Alignment:
| Q |
11 |
gagaagcagctatgtgctgaagaagtatcatctatggtactaacgaagatgcgagaaattgctgaggcatatttagaatcaccagtaaagaatgttgttg |
110 |
Q |
| |
|
||||||||||||||| | ||||||||||||||||||||||| || |||||||||||||| ||||||||||||||| ||| ||||| ||||||| |||| |
|
|
| T |
12235152 |
gagaagcagctatgtcccgaagaagtatcatctatggtactcacaaagatgcgagaaatcgctgaggcatatttacaatttccagttaagaatgcagttg |
12235053 |
T |
|
| Q |
111 |
ttactgtaccagcttattttagtgattctcaacgaaaagccactatagatgccggtgcaattgctggcatcaatgttataagggtaatgaatgaacccac |
210 |
Q |
| |
|
|||| || || |||||||| | |||||||||||||||||| ||||||||||| |||| ||||||||| |||||||||| ||||||||||| ||||||| |
|
|
| T |
12235052 |
ttaccgtgcctgcttatttcaatgattctcaacgaaaagcaactatagatgctggtgtcattgctggcctcaatgttatgagggtaatgaacgaacccat |
12234953 |
T |
|
| Q |
211 |
tgctgcagctgttgcatatggccttgacaagagagctgat |
250 |
Q |
| |
|
|| || |||||||||||||| |||||||||||| ||||| |
|
|
| T |
12234952 |
ggcagccgctgttgcatatggtcttgacaagagaactgat |
12234913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 11 - 240
Target Start/End: Original strand, 12258286 - 12258515
Alignment:
| Q |
11 |
gagaagcagctatgtgctgaagaagtatcatctatggtactaacgaagatgcgagaaattgctgaggcatatttagaatcaccagtaaagaatgttgttg |
110 |
Q |
| |
|
||||||||||| ||||| || |||||||||||| ||||| | || |||||||||||||||||||||||||||||||||||||| || ||||||| |||| |
|
|
| T |
12258286 |
gagaagcagctttgtgccgaggaagtatcatctgtggtattgacaaagatgcgagaaattgctgaggcatatttagaatcacccgttaagaatgcagttg |
12258385 |
T |
|
| Q |
111 |
ttactgtaccagcttattttagtgattctcaacgaaaagccactatagatgccggtgcaattgctggcatcaatgttataagggtaatgaatgaacccac |
210 |
Q |
| |
|
||||||| || || |||||||||||||| ||| | |||||||||||||||| ||| |||| |||| | |||||||| | | || | |||||||| || |
|
|
| T |
12258386 |
ttactgtgcctgcatattttagtgattcacaaaggaaagccactatagatgtgggtaatattgttggcctgaatgttatgaagatattaaatgaacctac |
12258485 |
T |
|
| Q |
211 |
tgctgcagctgttgcatatggccttgacaa |
240 |
Q |
| |
|
|||||||||| ||||||||||||||||||| |
|
|
| T |
12258486 |
tgctgcagcttttgcatatggccttgacaa |
12258515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 23 - 244
Target Start/End: Original strand, 16657234 - 16657455
Alignment:
| Q |
23 |
tgtgctgaagaagtatcatctatggtactaacgaagatgcgagaaattgctgaggcatatttagaatcaccagtaaagaatgttgttgttactgtaccag |
122 |
Q |
| |
|
|||||||| ||| ||||||||||| | || || |||||||||||| |||||||||||| | | || || || || ||||||| |||||||||||| |||| |
|
|
| T |
16657234 |
tgtgctgaggaaatatcatctatgatccttacaaagatgcgagaagttgctgaggcatttatggagtcgcctgtcaagaatgctgttgttactgtgccag |
16657333 |
T |
|
| Q |
123 |
cttattttagtgattctcaacgaaaagccactatagatgccggtgcaattgctggcatcaatgttataagggtaatgaatgaacccactgctgcagctgt |
222 |
Q |
| |
|
|||| || | |||||| || ||||||||||| |||||||| ||||| || |||||| | ||||| || | | || |||||||| |||||||||||| | |
|
|
| T |
16657334 |
cttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccatcgctggccttaatgtcattcgaattatcaatgaacctactgctgcagctat |
16657433 |
T |
|
| Q |
223 |
tgcatatggccttgacaagaga |
244 |
Q |
| |
|
||||||||| |||||||||||| |
|
|
| T |
16657434 |
tgcatatggtcttgacaagaga |
16657455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 69 - 240
Target Start/End: Original strand, 16661755 - 16661926
Alignment:
| Q |
69 |
ttgctgaggcatatttagaatcaccagtaaagaatgttgttgttactgtaccagcttattttagtgattctcaacgaaaagccactatagatgccggtgc |
168 |
Q |
| |
|
|||| ||||| ||||| |||||||| || || |||| ||||| ||||| || |||||||||| |||||||| ||||||||||| || ||||| ||||| |
|
|
| T |
16661755 |
ttgcagaggcttatttggaatcaccggttaaaaatgcagttgtcactgttcctgcttattttaacgattctcagcgaaaagccaccatggatgctggtgc |
16661854 |
T |
|
| Q |
169 |
aattgctggcatcaatgttataagggtaatgaatgaacccactgctgcagctgttgcatatggccttgacaa |
240 |
Q |
| |
|
||||||||| | || ||| | ||| |||| |||||||||||||| |||||| ||||||||||||||||||| |
|
|
| T |
16661855 |
cattgctggccttaacgttgtgaggataatcaatgaacccactgcagcagctattgcatatggccttgacaa |
16661926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 244
Target Start/End: Complemental strand, 43625791 - 43625642
Alignment:
| Q |
95 |
gtaaagaatgttgttgttactgtaccagcttattttagtgattctcaacgaaaagccactatagatgccggtgcaattgctggcatcaatgttataaggg |
194 |
Q |
| |
|
|||||||||| |||||||| || || ||||| || | ||||||||| ||||||||||| ||||||| |||| |||| ||| | |||||| || | | |
|
|
| T |
43625791 |
gtaaagaatgcagttgttaccgtgcctgcttacttcaatgattctcagcgaaaagccaccatagatgttggtgtcattgtcggccttaatgttttacgag |
43625692 |
T |
|
| Q |
195 |
taatgaatgaacccactgctgcagctgttgcatatggccttgacaagaga |
244 |
Q |
| |
|
|||| |||||||| || ||||| ||| | ||||| |||||| |||||||| |
|
|
| T |
43625691 |
taatcaatgaaccaacagctgctgctctagcatacggccttaacaagaga |
43625642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 127; Significance: 1e-65; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 29 - 250
Target Start/End: Complemental strand, 35132891 - 35132672
Alignment:
| Q |
29 |
gaagaagtatcatctatggtactaacgaagatgcgagaaattgctgaggcatatttagaatcaccagtaaagaatgttgttgttactgtaccagcttatt |
128 |
Q |
| |
|
|||||||||||||| |||||||| || ||||||||||||||||| ||||||||||||||||| | || ||||||| ||||||||||| || ||||||| |
|
|
| T |
35132891 |
gaagaagtatcatccatggtactcacaaagatgcgagaaattgc--aggcatatttagaatcaactgttaagaatgcagttgttactgtgcctgcttatt |
35132794 |
T |
|
| Q |
129 |
ttagtgattctcaacgaaaagccactatagatgccggtgcaattgctggcatcaatgttataagggtaatgaatgaacccactgctgcagctgttgcata |
228 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||| || |||||||||||||| ||||| ||||| |||||||| |
|
|
| T |
35132793 |
ttagtgattctcaacgaaaagccactatagatgctggtgctattgctggtcccaatgttatgagagtaatgaatgaacctactgccgcagcggttgcata |
35132694 |
T |
|
| Q |
229 |
tggccttgacaagagagctgat |
250 |
Q |
| |
|
|||||||||||||||| ||||| |
|
|
| T |
35132693 |
tggccttgacaagagatctgat |
35132672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 23 - 244
Target Start/End: Original strand, 9335608 - 9335829
Alignment:
| Q |
23 |
tgtgctgaagaagtatcatctatggtactaacgaagatgcgagaaattgctgaggcatatttagaatcaccagtaaagaatgttgttgttactgtaccag |
122 |
Q |
| |
|
|||||||| ||| |||| |||||| | || || |||||| |||| |||| ||||||||||| | || || || ||||||| |||||||| || |||| |
|
|
| T |
9335608 |
tgtgctgaggaaatatcttctatgttgcttacaaagatgagagaggttgcggaggcatatttggggtcgccggtcaagaatgccgttgttaccgtgccag |
9335707 |
T |
|
| Q |
123 |
cttattttagtgattctcaacgaaaagccactatagatgccggtgcaattgctggcatcaatgttataagggtaatgaatgaacccactgctgcagctgt |
222 |
Q |
| |
|
|||| || | ||||||||| ||||| ||||| |||||||| ||| | ||||||||| | ||||| || || |||| |||||||| |||||||||||| | |
|
|
| T |
9335708 |
cttacttcaatgattctcagcgaaaggccaccatagatgctggtactattgctggccttaatgtcattcggataatcaatgaacctactgctgcagctat |
9335807 |
T |
|
| Q |
223 |
tgcatatggccttgacaagaga |
244 |
Q |
| |
|
||||||||||||||| |||||| |
|
|
| T |
9335808 |
tgcatatggccttgataagaga |
9335829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 80 - 245
Target Start/End: Complemental strand, 30775646 - 30775481
Alignment:
| Q |
80 |
tatttagaatcaccagtaaagaatgttgttgttactgtaccagcttattttagtgattctcaacgaaaagccactatagatgccggtgcaattgctggca |
179 |
Q |
| |
|
||||| ||||| ||||| || |||| ||| | ||||| || |||||||| | |||| | || |||||||||||||| ||||| ||||| |||||||| |
|
|
| T |
30775646 |
tatttggaatccccagttaaaaatgcagttatcactgtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtc |
30775547 |
T |
|
| Q |
180 |
tcaatgttataagggtaatgaatgaacccactgctgcagctgttgcatatggccttgacaagagag |
245 |
Q |
| |
|
| |||||||| || |||| ||||| |||||||| |||||| |||||||||| ||||| ||||||| |
|
|
| T |
30775546 |
ttaatgttatgagaataattaatgagcccactgcagcagctattgcatatggacttgagaagagag |
30775481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 144
Target Start/End: Complemental strand, 54396805 - 54396753
Alignment:
| Q |
92 |
ccagtaaagaatgttgttgttactgtaccagcttattttagtgattctcaacg |
144 |
Q |
| |
|
||||| ||||||| |||||||||||| || |||||||| | |||||||||||| |
|
|
| T |
54396805 |
ccagtgaagaatgctgttgttactgttcctgcttatttcaatgattctcaacg |
54396753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 82; Significance: 8e-39; HSPs: 25)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 23 - 244
Target Start/End: Original strand, 10494091 - 10494312
Alignment:
| Q |
23 |
tgtgctgaagaagtatcatctatggtactaacgaagatgcgagaaattgctgaggcatatttagaatcaccagtaaagaatgttgttgttactgtaccag |
122 |
Q |
| |
|
||||| || ||| ||||||||||||| || | ||||||||||| |||| ||||||||||| | |||||||| ||||||| |||||||||||| || | |
|
|
| T |
10494091 |
tgtgccgaggaaatatcatctatggtccttataaagatgcgagaggttgcagaggcatatttggggtcaccagtcaagaatgctgttgttactgtgccgg |
10494190 |
T |
|
| Q |
123 |
cttattttagtgattctcaacgaaaagccactatagatgccggtgcaattgctggcatcaatgttataagggtaatgaatgaacccactgctgcagctgt |
222 |
Q |
| |
|
|||| || | |||||||||||||| || ||||| ||||| ||||| ||||||||| | ||||| || || |||| |||||||| |||||||||||| | |
|
|
| T |
10494191 |
cttacttcaacgattctcaacgaaaggctactattgatgctggtgctattgctggccttaatgtcattcggataatcaatgaacctactgctgcagctat |
10494290 |
T |
|
| Q |
223 |
tgcatatggccttgacaagaga |
244 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
10494291 |
tgcatatggccttgacaagaga |
10494312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 23 - 244
Target Start/End: Original strand, 13333173 - 13333394
Alignment:
| Q |
23 |
tgtgctgaagaagtatcatctatggtactaacgaagatgcgagaaattgctgaggcatatttagaatcaccagtaaagaatgttgttgttactgtaccag |
122 |
Q |
| |
|
||||| || ||| ||||||||||||| || || ||||||||||| |||| ||||||||| | | |||||||| ||||||| ||||||||||| || | |
|
|
| T |
13333173 |
tgtgccgaggaaatatcatctatggtccttacaaagatgcgagaggttgcagaggcatatatggggtcaccagtcaagaatgccgttgttactgtgccgg |
13333272 |
T |
|
| Q |
123 |
cttattttagtgattctcaacgaaaagccactatagatgccggtgcaattgctggcatcaatgttataagggtaatgaatgaacccactgctgcagctgt |
222 |
Q |
| |
|
|||| || | ||||||||| ||||| ||||| |||||||| ||||| ||||||||| | ||| | || | |||| |||||||| |||||||||||| | |
|
|
| T |
13333273 |
cttacttcaatgattctcagcgaaaggccaccatagatgctggtgctattgctggccttaatatcattcgaataatcaatgaacctactgctgcagctat |
13333372 |
T |
|
| Q |
223 |
tgcatatggccttgacaagaga |
244 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
13333373 |
tgcatatggccttgacaagaga |
13333394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 107 - 240
Target Start/End: Original strand, 8585507 - 8585640
Alignment:
| Q |
107 |
gttgttactgtaccagcttattttagtgattctcaacgaaaagccactatagatgccggtgcaattgctggcatcaatgttataagggtaatgaatgaac |
206 |
Q |
| |
|
||||| ||||| || |||||||| | ||||||||| ||||||||||| || ||||| ||||| ||||||||| | |||||||| ||| |||| ||||||| |
|
|
| T |
8585507 |
gttgtgactgtgcctgcttatttcaatgattctcagcgaaaagccaccatggatgctggtgccattgctggccttaatgttatgaggataatcaatgaac |
8585606 |
T |
|
| Q |
207 |
ccactgctgcagctgttgcatatggccttgacaa |
240 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| |
|
|
| T |
8585607 |
ccactgctgcagctattgcatatggccttgacaa |
8585640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 8 - 245
Target Start/End: Complemental strand, 8659829 - 8659592
Alignment:
| Q |
8 |
caggagaagcagctatgtgctgaagaagtatcatctatggtactaacgaagatgcgagaaattgctgaggcatatttagaatcaccagtaaagaatgttg |
107 |
Q |
| |
|
||||||||||| | ||||| || ||| |||||||||||||||| || || ||||||||| |||| ||| ||||| || ||||| || ||||||| || |
|
|
| T |
8659829 |
caggagaagcacttttgtgcggaggaaatatcatctatggtacttacaaaaatgcgagaagttgcagagacatatctaatgtcacctgtgaagaatgctg |
8659730 |
T |
|
| Q |
108 |
ttgttactgtaccagcttattttagtgattctcaacgaaaagccactatagatgccggtgcaattgctggcatcaatgttataagggtaatgaatgaacc |
207 |
Q |
| |
|
||||||| || || || || || | ||||||||| ||||||||||| |||||| ||||||| ||||||||| | ||||| || | |||| |||||||| |
|
|
| T |
8659729 |
ttgttacagtgcctgcatagttcaatgattctcagcgaaaagccaccatagattccggtgccattgctggccttaatgtcattcagataattaatgaacc |
8659630 |
T |
|
| Q |
208 |
cactgctgcagctgttgcatatggccttgacaagagag |
245 |
Q |
| |
|
|||||||||||| |||||||||| |||||||||||| |
|
|
| T |
8659629 |
tactgctgcagctattgcatatggttttgacaagagag |
8659592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 41 - 244
Target Start/End: Complemental strand, 17268372 - 17268169
Alignment:
| Q |
41 |
tctatggtactaacgaagatgcgagaaattgctgaggcatatttagaatcaccagtaaagaatgttgttgttactgtaccagcttattttagtgattctc |
140 |
Q |
| |
|
||||||||||| || |||||||| || |||||||||| |||| |||||||| | || | ||||| ||| ||||||| || ||||| || | ||||||| |
|
|
| T |
17268372 |
tctatggtactcacaaagatgcgggagattgctgaggaatatctagaatcatcggttatgaatgctgtcattactgtcccggcttacttcaacgattctc |
17268273 |
T |
|
| Q |
141 |
aacgaaaagccactatagatgccggtgcaattgctggcatcaatgttataagggtaatgaatgaacccactgctgcagctgttgcatatggccttgacaa |
240 |
Q |
| |
|
| ||||||||||| |||||||| |||| ||||||||| | ||||| | | |||||| |||||||| |||||||||||| ||||||||||||||| ||| |
|
|
| T |
17268272 |
agcgaaaagccaccatagatgctggtgtcattgctggccttaatgtattgaaggtaatcaatgaaccaactgctgcagctattgcatatggccttggcaa |
17268173 |
T |
|
| Q |
241 |
gaga |
244 |
Q |
| |
|
|||| |
|
|
| T |
17268172 |
gaga |
17268169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 57 - 247
Target Start/End: Complemental strand, 8582117 - 8581927
Alignment:
| Q |
57 |
agatgcgagaaattgctgaggcatatttagaatcaccagtaaagaatgttgttgttactgtaccagcttattttagtgattctcaacgaaaagccactat |
156 |
Q |
| |
|
|||||||||| ||||| ||||||| ||| || ||||| || ||||||| || |||||||||| |||||||||| |||||| ||||||| |||||||| |
|
|
| T |
8582117 |
agatgcgagagattgcagaggcatttttggagtcacctgttaagaatgcagtgattactgtacctgcttattttaatgattcacaacgaagagccactaa |
8582018 |
T |
|
| Q |
157 |
agatgccggtgcaattgctggcatcaatgttataagggtaatgaatgaacccactgctgcagctgttgcatatggccttgacaagagagct |
247 |
Q |
| |
|
|||||| |||| |||||| || ||||||| || || |||| |||||||| ||||| |||||| |||||||||||||| | ||||||||| |
|
|
| T |
8582017 |
agatgcaggtgaaattgcaggtctcaatgtaatgcggataatcaatgaaccgactgcggcagctcttgcatatggccttcaaaagagagct |
8581927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 247
Target Start/End: Complemental strand, 8570759 - 8570538
Alignment:
| Q |
26 |
gctgaagaagtatcatctatggtactaacgaagatgcgagaaattgctgaggcatatttagaatcaccagtaaagaatgttgttgttactgtaccagctt |
125 |
Q |
| |
|
||||||||| |||||||| || | || | ||||||||||| ||||| || |||| ||| || || || || ||||||| || |||||||||| |||| |
|
|
| T |
8570759 |
gctgaagaaatatcatctgtgattctctcaaagatgcgagagattgcagaagcatttttggagtctcctgttaagaatgcagtgattactgtacctgctt |
8570660 |
T |
|
| Q |
126 |
attttagtgattctcaacgaaaagccactatagatgccggtgcaattgctggcatcaatgttataagggtaatgaatgaacccactgctgcagctgttgc |
225 |
Q |
| |
|
|||||| |||||| ||||||| |||||||| |||||| |||| ||||||||| ||||||| || || |||| |||||||| ||||| |||||| |||| |
|
|
| T |
8570659 |
attttaatgattcacaacgaagagccactaaagatgcaggtgaaattgctggtctcaatgtaatgcggataatcaatgaaccgactgcggcagctcttgc |
8570560 |
T |
|
| Q |
226 |
atatggccttgacaagagagct |
247 |
Q |
| |
|
|||||||||| | ||||||||| |
|
|
| T |
8570559 |
atatggccttcaaaagagagct |
8570538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 23 - 244
Target Start/End: Complemental strand, 8667870 - 8667649
Alignment:
| Q |
23 |
tgtgctgaagaagtatcatctatggtactaacgaagatgcgagaaattgctgaggcatatttagaatcaccagtaaagaatgttgttgttactgtaccag |
122 |
Q |
| |
|
|||||||| ||| |||| |||||||| || || ||||||||||| |||| ||||||||| | | || || || ||||||| ||||||||||| |||| |
|
|
| T |
8667870 |
tgtgctgaggaaatatcttctatggtgcttacaaagatgcgagaggttgcggaggcatatctggggtcgccggtcaagaatgccgttgttactgtgccag |
8667771 |
T |
|
| Q |
123 |
cttattttagtgattctcaacgaaaagccactatagatgccggtgcaattgctggcatcaatgttataagggtaatgaatgaacccactgctgcagctgt |
222 |
Q |
| |
|
|||| || | ||||||||| ||||| ||||| |||||||| ||| | |||||||| | ||||| || || |||| |||||||| ||||| |||||| | |
|
|
| T |
8667770 |
cttacttcaatgattctcagcgaaaggccaccatagatgctggtactattgctggacttaatgtcattcggataatcaatgaacctactgcggcagctat |
8667671 |
T |
|
| Q |
223 |
tgcatatggccttgacaagaga |
244 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
8667670 |
tgcatatggccttgacaagaga |
8667649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 23 - 244
Target Start/End: Original strand, 8671347 - 8671568
Alignment:
| Q |
23 |
tgtgctgaagaagtatcatctatggtactaacgaagatgcgagaaattgctgaggcatatttagaatcaccagtaaagaatgttgttgttactgtaccag |
122 |
Q |
| |
|
|||||||| ||| |||| |||||||| || || ||||||||||| |||| ||||||||| | || ||||| || ||||||| |||||||| || |||| |
|
|
| T |
8671347 |
tgtgctgaggaaatatcttctatggtgcttacaaagatgcgagaggttgcggaggcatatctggagtcaccggtcaagaatgccgttgttaccgtgccag |
8671446 |
T |
|
| Q |
123 |
cttattttagtgattctcaacgaaaagccactatagatgccggtgcaattgctggcatcaatgttataagggtaatgaatgaacccactgctgcagctgt |
222 |
Q |
| |
|
|||| || | ||||||||| |||| ||||| || ||||| ||| | |||||||| | ||||| || || |||| |||||||| |||||||||||| | |
|
|
| T |
8671447 |
cttacttcaatgattctcagcgaacggccaccattgatgctggtactattgctggacttaatgtcattcggataatcaatgaacctactgctgcagctat |
8671546 |
T |
|
| Q |
223 |
tgcatatggccttgacaagaga |
244 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
8671547 |
tgcatatggccttgacaagaga |
8671568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 8 - 244
Target Start/End: Complemental strand, 3147738 - 3147502
Alignment:
| Q |
8 |
caggagaagcagctatgtgctgaagaagtatcatctatggtactaacgaagatgcgagaaattgctgaggcatatttagaatcaccagtaaagaatgttg |
107 |
Q |
| |
|
||||||||||| ||||||||||||||| | ||||||||||| ||||| |||||||| | | ||| |||| | |||||||| || || ||||||| | |
|
|
| T |
3147738 |
caggagaagcacctatgtgctgaagaaatctcatctatggttctaacaaagatgcgcaagactgcagaggagtttttagaattgcctgtcaagaatgcag |
3147639 |
T |
|
| Q |
108 |
ttgttactgtaccagcttattttagtgattctcaacgaaaagccactatagatgccggtgcaattgctggcatcaatgttataagggtaatgaatgaacc |
207 |
Q |
| |
|
||||||| ||||| |||||||| | |||| |||| || ||||| || |||||||| |||| ||||||||| | ||| |||| || |||| |||||||| |
|
|
| T |
3147638 |
ttgttaccgtacctgcttatttcaatgatgctcagcggaaagcgacaatagatgctggtgttattgctggccttaatattatgcggataatcaatgaacc |
3147539 |
T |
|
| Q |
208 |
cactgctgcagctgttgcatatggccttgacaagaga |
244 |
Q |
| |
|
|||||||||||| |||| ||||| || ||||||||| |
|
|
| T |
3147538 |
tactgctgcagctattgcgtatggactggacaagaga |
3147502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 240
Target Start/End: Complemental strand, 8628938 - 8628766
Alignment:
| Q |
68 |
attgctgaggcatatttagaatcaccagtaaagaatgttgttgttactgtaccagcttattttagtgattctcaacgaaaagccactatagatgccggtg |
167 |
Q |
| |
|
||||| ||||| ||||| ||||||| ||||| |||| ||||| || || || |||||||| | ||||||||| ||||||||||| || |||| |||| |
|
|
| T |
8628938 |
attgcagaggcttatttgaaatcacctgtaaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagcgaaaagccaccatgaatgctggtg |
8628839 |
T |
|
| Q |
168 |
caattgctggcatcaatgttataagggtaatgaatgaacccactgctgcagctgttgcatatggccttgacaa |
240 |
Q |
| |
|
| ||||||||| | |||||||| ||| |||| ||||| ||||||||||||||| ||||||||||||||||||| |
|
|
| T |
8628838 |
ccattgctggccttaatgttatgaggataatcaatgaccccactgctgcagctattgcatatggccttgacaa |
8628766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 36 - 244
Target Start/End: Complemental strand, 1301902 - 1301690
Alignment:
| Q |
36 |
tatcatctatggtactaacgaagatgcgagaaattgctgaggcatatttagaatcaccagtaaagaatgttgttgttactgtaccagcttattttagtga |
135 |
Q |
| |
|
||||||||||||| || |||||||||||||||||||| ||| ||||| || |||||||| | |||| |||||||||||| || || |||| | ||| |
|
|
| T |
1301902 |
tatcatctatggtccttacgaagatgcgagaaattgcagagacatatctaatgtcaccagtgacaaatgctgttgttactgtgcctgcacatttcaatga |
1301803 |
T |
|
| Q |
136 |
ttctcaacgaaaagccactatagatgccggtgcaattgctggcatcaatgttataagggtaatgaatgaac----ccactgctgcagctgttgcatatgg |
231 |
Q |
| |
|
|||||| ||||||||||| |||||||||||||||||||||||| | ||||| || | |||| ||||||| | |||||||||||| |||| ||||| |
|
|
| T |
1301802 |
ttctcagcgaaaagccaccatagatgccggtgcaattgctggccttaatgtcattcagataattaatgaacctagctactgctgcagctattgcgtatgg |
1301703 |
T |
|
| Q |
232 |
ccttgacaagaga |
244 |
Q |
| |
|
||||||||||| |
|
|
| T |
1301702 |
ttttgacaagaga |
1301690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 41 - 244
Target Start/End: Complemental strand, 17260674 - 17260471
Alignment:
| Q |
41 |
tctatggtactaacgaagatgcgagaaattgctgaggcatatttagaatcaccagtaaagaatgttgttgttactgtaccagcttattttagtgattctc |
140 |
Q |
| |
|
||||||||||| ||||||||| || |||||||||| |||| | |||||| | || | ||||||||| ||||||| || |||||||| | |||||||| |
|
|
| T |
17260674 |
tctatggtacttgtgaagatgcgggagattgctgaggtatatcttgaatcatcggttattaatgttgttattactgttcctgcttatttcaatgattctc |
17260575 |
T |
|
| Q |
141 |
aacgaaaagccactatagatgccggtgcaattgctggcatcaatgttataagggtaatgaatgaacccactgctgcagctgttgcatatggccttgacaa |
240 |
Q |
| |
|
| ||||||||||| |||||||| |||| ||||||||| | ||||| | | | |||| |||||||| | |||||||||| ||||||||||||||| ||| |
|
|
| T |
17260574 |
agcgaaaagccaccatagatgctggtgttattgctggcctttatgttttgaagttaattaatgaacctattgctgcagctattgcatatggccttgtcaa |
17260475 |
T |
|
| Q |
241 |
gaga |
244 |
Q |
| |
|
|||| |
|
|
| T |
17260474 |
gaga |
17260471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 8 - 239
Target Start/End: Original strand, 27830577 - 27830808
Alignment:
| Q |
8 |
caggagaagcagctatgtgctgaagaagtatcatctatggtactaacgaagatgcgagaaattgctgaggcatatttagaatcaccagtaaagaatgttg |
107 |
Q |
| |
|
|||||||| || ||||||| || ||| | ||||| ||||| || || ||||||||||| || || ||||||||||| ||||||| || ||||||| | |
|
|
| T |
27830577 |
caggagaaacacttatgtgcggaggaaatttcatcaatggtccttacaaagatgcgagagatcgcggaggcatatttgcaatcaccggttaagaatgcag |
27830676 |
T |
|
| Q |
108 |
ttgttactgtaccagcttattttagtgattctcaacgaaaagccactatagatgccggtgcaattgctggcatcaatgttataagggtaatgaatgaacc |
207 |
Q |
| |
|
| | || || ||||||||||| | ||| |||||||||||||||||| ||||| ||||||| ||||||||| | |||||||| || |||| | || || |
|
|
| T |
27830677 |
taataaccgtgccagcttatttcaatgactctcaacgaaaagccactgtagattccggtgccattgctggccttaatgttatgcggataataagcgagcc |
27830776 |
T |
|
| Q |
208 |
cactgctgcagctgttgcatatggccttgaca |
239 |
Q |
| |
|
|||||||||||| |||||||||||||||||| |
|
|
| T |
27830777 |
tactgctgcagctattgcatatggccttgaca |
27830808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 6789977 - 6789742
Alignment:
| Q |
9 |
aggagaagcagctatgtgctgaagaagtatcatctatggtactaacgaagatgcgagaaattgctgaggcatatttagaatcaccagtaaagaatgttgt |
108 |
Q |
| |
|
|||||||||| ||||||| ||| ||||| || |||||| | || || |||||||| || ||||||||| |||||| | ||| |||| |||| || |
|
|
| T |
6789977 |
aggagaagcaactatgtgttgaggaagtttcgtctatgatcctcaccaagatgcgggagattgctgagaaatatttgcagtcagagataaaaaatgcagt |
6789878 |
T |
|
| Q |
109 |
tgttactgtaccagcttattttagtgattctcaacgaaaagccactatagatgccggtgcaattgctggcatcaatgttataagggtaatgaatgaaccc |
208 |
Q |
| |
|
| ||||||| || |||||||| | |||||||||||| ||||||||| ||||||| ||||| |||||||| | ||||||||| | |||| |||||||| |
|
|
| T |
6789877 |
tattactgtgcctgcttatttcaatgattctcaacggaaagccactttagatgctggtgccattgctggtcttaatgttatacgaataatcaatgaacca |
6789778 |
T |
|
| Q |
209 |
actgctgcagctgttgcatatggccttgacaagaga |
244 |
Q |
| |
|
|| ||||| ||| |||||||||||||||| |||||| |
|
|
| T |
6789777 |
acagctgctgctcttgcatatggccttgataagaga |
6789742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 89 - 244
Target Start/End: Original strand, 7877516 - 7877671
Alignment:
| Q |
89 |
tcaccagtaaagaatgttgttgttactgtaccagcttattttagtgattctcaacgaaaagccactatagatgccggtgcaattgctggcatcaatgtta |
188 |
Q |
| |
|
||||| || ||||||| ||||||||||| || |||||||| | ||||||||||||||||||||| | |||||| |||||| |||| ||| ||||||||| |
|
|
| T |
7877516 |
tcacctgtcaagaatgcagttgttactgtgccggcttatttcaatgattctcaacgaaaagccacaaaagatgctggtgcagttgccggcctcaatgtta |
7877615 |
T |
|
| Q |
189 |
taagggtaatgaatgaacccactgctgcagctgttgcatatggccttgacaagaga |
244 |
Q |
| |
|
| || |||| |||||||| |||||||| || |||||||||||||| | |||||| |
|
|
| T |
7877616 |
tgcggataattaatgaaccaactgctgctgcccttgcatatggccttcaaaagaga |
7877671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 23 - 247
Target Start/End: Complemental strand, 8602425 - 8602201
Alignment:
| Q |
23 |
tgtgctgaagaagtatcatctatggtactaacgaagatgcgagaaattgctgaggcatatttagaatcaccagtaaagaatgttgttgttactgtaccag |
122 |
Q |
| |
|
|||||||| ||| | ||||| ||||| || || |||||||| |||||||| ||| | | | || ||||| || ||||||| ||||||||||| || | |
|
|
| T |
8602425 |
tgtgctgaggaaatctcatcaatggtccttacaaagatgcgtgaaattgcagagaagtttctggagtcacctgtcaagaatgcagttgttactgtgccgg |
8602326 |
T |
|
| Q |
123 |
cttattttagtgattctcaacgaaaagccactatagatgccggtgcaattgctggcatcaatgttataagggtaatgaatgaacccactgctgcagctgt |
222 |
Q |
| |
|
||||||||| ||||||||| ||||||||||| | |||||| ||||| |||||||| ||||||| || || |||| ||||| || ||||| || ||| | |
|
|
| T |
8602325 |
cttattttaatgattctcagcgaaaagccacaaaagatgctggtgccattgctggtctcaatgtaatgcggataatcaatgagccaactgcagctgctct |
8602226 |
T |
|
| Q |
223 |
tgcatatggccttgacaagagagct |
247 |
Q |
| |
|
||||||||||||| | ||||||||| |
|
|
| T |
8602225 |
tgcatatggccttcaaaagagagct |
8602201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 245
Target Start/End: Original strand, 8636064 - 8636282
Alignment:
| Q |
27 |
ctgaagaagtatcatctatggtactaacgaagatgcgagaaattgctgaggcatatttagaatcaccagtaaagaatgttgttgttactgtaccagctta |
126 |
Q |
| |
|
|||| ||| |||| |||||||| || || ||||||||||| ||||||||||||||| | |||||| | || ||||||| || ||||||| || ||||| |
|
|
| T |
8636064 |
ctgaggaaatatcgtctatggtcctgacaaagatgcgagagattgctgaggcatatctggaatcatctgtcaagaatgcagtcattactgtgcccgctta |
8636163 |
T |
|
| Q |
127 |
ttttagtgattctcaacgaaaagccactatagatgccggtgcaattgctggcatcaatgttataagggtaatgaatgaacccactgctgcagctgttgca |
226 |
Q |
| |
|
||| | ||||||||| || ||| |||| | |||||| ||||| ||||| ||| | ||||| || || |||| |||||||| |||||||||||| |||| |
|
|
| T |
8636164 |
tttcaatgattctcagcgtaaatccaccaaagatgctggtgccattgccggccttaatgtaattcggataatcaatgaaccaactgctgcagcttttgcg |
8636263 |
T |
|
| Q |
227 |
tatggccttgacaagagag |
245 |
Q |
| |
|
||||| ||| | ||||||| |
|
|
| T |
8636264 |
tatggacttcaaaagagag |
8636282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 244
Target Start/End: Complemental strand, 8647328 - 8647107
Alignment:
| Q |
23 |
tgtgctgaagaagtatcatctatggtactaacgaagatgcgagaaattgctgaggcatatttagaatcaccagtaaagaatgttgttgttactgtaccag |
122 |
Q |
| |
|
|||||||| ||| ||||||| ||| | || || ||||||||||| |||| ||| ||||||| || || |||||||||| ||||||||||| || | |
|
|
| T |
8647328 |
tgtgctgaggaaatatcatcgatgatcctcacaaagatgcgagaggttgcagagaaatatttaatgtcccctgtaaagaatgcagttgttactgtgcctg |
8647229 |
T |
|
| Q |
123 |
cttattttagtgattctcaacgaaaagccactatagatgccggtgcaattgctggcatcaatgttataagggtaatgaatgaacccactgctgcagctgt |
222 |
Q |
| |
|
| || || | ||||| ||| ||||||||||||||||||||||| || ||||||||| | ||| | || || |||| |||||||| || ||||| ||| | |
|
|
| T |
8647228 |
catacttcaatgattatcagcgaaaagccactatagatgccggggccattgctggccttaatatcatccggataatcaatgaaccaacagctgctgctct |
8647129 |
T |
|
| Q |
223 |
tgcatatggccttgacaagaga |
244 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
8647128 |
cgcatatggccttgacaagaga |
8647107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 8654923 - 8654683
Alignment:
| Q |
1 |
caaaggccaggagaagcagctatgtgctgaagaagtatcatctatggtactaacgaagatgcgagaaattgctgaggcatatttagaatcaccagtaaag |
100 |
Q |
| |
|
|||||| || |||||||| | |||||||| ||| |||||||| ||| || || ||||||||||| ||||| |||||||| | | |||||| || || |
|
|
| T |
8654923 |
caaaggtcaagagaagcaattttgtgctgaggaaatatcatctgcggttcttacaaagatgcgagagattgcagaggcataccttggatcacccgtcaaa |
8654824 |
T |
|
| Q |
101 |
aatgttgttgttactgtaccagcttattttagtgattctcaacgaaaagccactatagatgccggtgcaattgctggcatcaatgttataagggtaatga |
200 |
Q |
| |
|
||||| ||||||||||| || || || || | ||| ||||| |||||||| || |||||||| ||||| |||||||| | || || || || || | | |
|
|
| T |
8654823 |
aatgtcgttgttactgtgccggcatacttcaatgactctcagcgaaaagcaaccatagatgctggtgccattgctggacttaacgtcattcggatactca |
8654724 |
T |
|
| Q |
201 |
atgaacccactgctgcagctgttgcatatggccttgacaag |
241 |
Q |
| |
|
||||||| ||||| |||||| |||||||||||||||||||| |
|
|
| T |
8654723 |
atgaacctactgccgcagctattgcatatggccttgacaag |
8654683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 247
Target Start/End: Complemental strand, 8576678 - 8576553
Alignment:
| Q |
122 |
gcttattttagtgattctcaacgaaaagccactatagatgccggtgcaattgctggcatcaatgttataagggtaatgaatgaacccactgctgcagctg |
221 |
Q |
| |
|
|||||||||| |||||| ||||||| |||||||| |||||| |||||||||||||| ||||||| || | |||| |||||||| ||||| |||||| |
|
|
| T |
8576678 |
gcttattttaatgattcccaacgaagagccactaaagatgcaggtgcaattgctggtctcaatgtcatgcagataatcaatgaaccgactgcggcagctc |
8576579 |
T |
|
| Q |
222 |
ttgcatatggccttgacaagagagct |
247 |
Q |
| |
|
|||| ||||||||| | ||||||||| |
|
|
| T |
8576578 |
ttgcgtatggccttcaaaagagagct |
8576553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 99 - 247
Target Start/End: Original strand, 8382669 - 8382817
Alignment:
| Q |
99 |
agaatgttgttgttactgtaccagcttattttagtgattctcaacgaaaagccactatagatgccggtgcaattgctggcatcaatgttataagggtaat |
198 |
Q |
| |
|
||||||| |||||||| || || || ||||| | |||||||||||| |||||||| | |||||| ||||| ||||||||| ||||||| || || |||| |
|
|
| T |
8382669 |
agaatgtagttgttaccgtgcctgcatatttcaatgattctcaacggaaagccacaaaagatgctggtgcgattgctggcctcaatgtaatgcggataat |
8382768 |
T |
|
| Q |
199 |
gaatgaacccactgctgcagctgttgcatatggccttgacaagagagct |
247 |
Q |
| |
|
||||| || ||||| || ||| |||||||||||||| | ||||||||| |
|
|
| T |
8382769 |
caatgagccaactgccgctgctcttgcatatggccttcagaagagagct |
8382817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 57 - 247
Target Start/End: Complemental strand, 8546049 - 8545859
Alignment:
| Q |
57 |
agatgcgagaaattgctgaggcatatttagaatcaccagtaaagaatgttgttgttactgtaccagcttattttagtgattctcaacgaaaagccactat |
156 |
Q |
| |
|
|||||||||| ||||| ||||||| ||| || ||||| || ||||||| || |||||||||| |||||||||| |||||| |||| || | |||| | |
|
|
| T |
8546049 |
agatgcgagagattgcagaggcatttttggagtcacctgttaagaatgcagtgattactgtacctgcttattttaatgattcacaacaaagatccacaaa |
8545950 |
T |
|
| Q |
157 |
agatgccggtgcaattgctggcatcaatgttataagggtaatgaatgaacccactgctgcagctgttgcatatggccttgacaagagagct |
247 |
Q |
| |
|
|||||| |||| |||||| || | ||||| || || |||| |||||||| ||||| || ||| |||||||||||||| | ||||||||| |
|
|
| T |
8545949 |
agatgcaggtgaaattgccggtctaaatgtcatgcggataatcaatgaaccgactgcggcggctcttgcatatggccttcaaaagagagct |
8545859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 245
Target Start/End: Complemental strand, 8591074 - 8590867
Alignment:
| Q |
38 |
tcatctatggtactaacgaagatgcgagaaattgctgaggcatatttagaatcaccagtaaagaatgttgttgttactgtaccagcttattttagtgatt |
137 |
Q |
| |
|
||||| ||||| || || ||||||||||| |||||||| | ||| || ||||| || ||||||| ||||||||||| ||||||||||||| ||||| |
|
|
| T |
8591074 |
tcatccatggttctcacaaagatgcgagagattgctgaaaagtttttggagtcacctgtcaagaatgcagttgttactgtgccagcttattttaatgatt |
8590975 |
T |
|
| Q |
138 |
ctcaacgaaaagccactatagatgccggtgcaattgctggcatcaatgttataagggtaatgaatgaacccactgctgcagctgttgcatatggccttga |
237 |
Q |
| |
|
|||| | ||||| || | |||||| |||| ||||||||| | ||||| || || |||| |||||||| ||||| || | |||||||||||||| | |
|
|
| T |
8590974 |
ctcagaggaaagctaccaaagatgctggtgtcattgctggcttgaatgtaatgcggataattaatgaaccaactgccgctggccttgcatatggccttca |
8590875 |
T |
|
| Q |
238 |
caagagag |
245 |
Q |
| |
|
||||||| |
|
|
| T |
8590874 |
aaagagag |
8590867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 119 - 231
Target Start/End: Original strand, 29577482 - 29577594
Alignment:
| Q |
119 |
ccagcttattttagtgattctcaacgaaaagccactatagatgccggtgcaattgctggcatcaatgttataagggtaatgaatgaacccactgctgcag |
218 |
Q |
| |
|
||||||||||| | ||||||||| ||||||||||| | ||||||||| ||||||||| ||||||| || || |||| |||||||| |||||||| | |
|
|
| T |
29577482 |
ccagcttatttcaatgattctcagcgaaaagccaccaaagatgccggcattattgctggcctcaatgtaatgcggataatcaatgaaccaactgctgctg |
29577581 |
T |
|
| Q |
219 |
ctgttgcatatgg |
231 |
Q |
| |
|
| |||||||||| |
|
|
| T |
29577582 |
cacttgcatatgg |
29577594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 70; Significance: 1e-31; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 8 - 249
Target Start/End: Original strand, 34466495 - 34466736
Alignment:
| Q |
8 |
caggagaagcagctatgtgctgaagaagtatcatctatggtactaacgaagatgcgagaaattgctgaggcatatttagaatcaccagtaaagaatgttg |
107 |
Q |
| |
|
||||||||||| ||||||||||| ||| | ||||||||| | || | |||||||| || | ||| |||| |||||| ||||||||| | ||||||| | |
|
|
| T |
34466495 |
caggagaagcacctatgtgctgaggaaatctcatctatgatcctttcaaagatgcgggatactgcagaggaatatttggaatcaccaattaagaatgcag |
34466594 |
T |
|
| Q |
108 |
ttgttactgtaccagcttattttagtgattctcaacgaaaagccactatagatgccggtgcaattgctggcatcaatgttataagggtaatgaatgaacc |
207 |
Q |
| |
|
|| | || || || |||||||||| ||||||||| |||||||| ||| | ||||| ||| | ||||||||| | |||||| | |||| |||||||| |
|
|
| T |
34466595 |
ttatcaccgtgcctgcttattttaatgattctcagcgaaaagctactgtggatgctggtactattgctggccttaatgttttgcaaataatcaatgaacc |
34466694 |
T |
|
| Q |
208 |
cactgctgcagctgttgcatatggccttgacaagagagctga |
249 |
Q |
| |
|
||||||||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
34466695 |
cactgctgcagctattgcatatggacttgacaagagagctga |
34466736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 15595408 - 15595265
Alignment:
| Q |
107 |
gttgttactgtaccagcttattttagtgattctcaacgaaaagccactatagatgccggtgcaattgctggcatcaatgttataagggtaatgaatgaac |
206 |
Q |
| |
|
|||||||| || || |||||| | | |||||||||||||||||||||||||||||| ||||| ||||||||| | ||||||||| ||||||| ||||||| |
|
|
| T |
15595408 |
gttgttaccgtgcctgcttatctcaatgattctcaacgaaaagccactatagatgcaggtgccattgctggccttaatgttatacgggtaatcaatgaac |
15595309 |
T |
|
| Q |
207 |
c-------cactgctgcagctgttgcatatggccttgacaagag |
243 |
Q |
| |
|
| || ||||||||| |||||||||||||||||||||| |
|
|
| T |
15595308 |
cgacagctgacagctgcagctattgcatatggccttgacaagag |
15595265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 244
Target Start/End: Original strand, 4678350 - 4678496
Alignment:
| Q |
98 |
aagaatgttgttgttactgtaccagcttattttagtgattctcaacgaaaagccactatagatgccggtgcaattgctggcatcaatgttataagggtaa |
197 |
Q |
| |
|
|||||||| ||||||||||| || || || || | |||||||||||||||||| || |||||||| ||||| |||||||| | ||||| || ||| |
|
|
| T |
4678350 |
aagaatgtcgttgttactgtgcctgcatacttcaatgattctcaacgaaaagctaccatagatgctggtgccattgctggacttaatgtcattcaaataa |
4678449 |
T |
|
| Q |
198 |
tgaatgaacccactgctgcagctgttgcatatggccttgacaagaga |
244 |
Q |
| |
|
| || ||||| |||| ||||||| |||||||||| ||||||||||| |
|
|
| T |
4678450 |
tcaacgaacctactgttgcagctattgcatatggttttgacaagaga |
4678496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 8 - 231
Target Start/End: Complemental strand, 28220417 - 28220194
Alignment:
| Q |
8 |
caggagaagcagctatgtgctgaagaagtatcatctatggtactaacgaagatgcgagaaattgctgaggcatatttagaatcaccagtaaagaatgttg |
107 |
Q |
| |
|
||||||||||| |||||||| |||||| | ||||||||||| ||||| |||||||| || ||||| ||||| | ||| |||| || || ||||||| | |
|
|
| T |
28220417 |
caggagaagcacctatgtgccgaagaaatctcatctatggttctaacaaagatgcgtgagattgcagaggcctttttggaatttcctgtcaagaatgcag |
28220318 |
T |
|
| Q |
108 |
ttgttactgtaccagcttattttagtgattctcaacgaaaagccactatagatgccggtgcaattgctggcatcaatgttataagggtaatgaatgaacc |
207 |
Q |
| |
|
|| ||||||| || |||||||| | ||||| ||| || |||||||| |||||||| ||| | |||||||| | |||||| ||||| || | |||||||| |
|
|
| T |
28220317 |
ttattactgtgcctgcttatttcaatgattatcagcggaaagccaccatagatgcaggtaccattgctggtctaaatgttctaaggatagtcaatgaacc |
28220218 |
T |
|
| Q |
208 |
cactgctgcagctgttgcatatgg |
231 |
Q |
| |
|
||||||||| ||| |||||||||| |
|
|
| T |
28220217 |
cactgctgctgctattgcatatgg |
28220194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 8 - 244
Target Start/End: Complemental strand, 43745313 - 43745079
Alignment:
| Q |
8 |
caggagaagcagctatgtgctgaagaagtatcatctatggtactaacgaagatgcgagaaattgctgaggcatatttagaatcaccagtaaagaatgttg |
107 |
Q |
| |
|
||||||||||| |||||||| |||||| | ||||||||| | ||||| |||||||| || ||||| ||| ||| ||| ||| || || ||||||| | |
|
|
| T |
43745313 |
caggagaagcacctatgtgccgaagaaatctcatctatgattctaacaaagatgcgtgagattgcagagacatttttgcaattgcctgtcaagaatgcag |
43745214 |
T |
|
| Q |
108 |
ttgttactgtaccagcttattttagtgattctcaacgaaaagccactatagatgccggtgcaattgctggcatcaatgttataagggtaatgaatgaacc |
207 |
Q |
| |
|
|||||||||| || |||||||| | ||||| ||| || |||||||| ||||||| ||||| |||||||| | ||||||| | | |||| |||||||| |
|
|
| T |
43745213 |
ttgttactgtgccggcttatttcaatgattatcagcggaaagccac--tagatgctggtgccattgctgggcttgatgttatgaagataatcaatgaacc |
43745116 |
T |
|
| Q |
208 |
cactgctgcagctgttgcatatggccttgacaagaga |
244 |
Q |
| |
|
||||||||||||| |||||||||| || || |||||| |
|
|
| T |
43745115 |
cactgctgcagctattgcatatggtctggaaaagaga |
43745079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 247
Target Start/End: Complemental strand, 12528953 - 12528731
Alignment:
| Q |
25 |
tgctgaagaagtatcatctatggtactaacgaagatgcgagaaattgctgaggcatatttagaatcaccagtaaagaatgttgttgttactgtaccagct |
124 |
Q |
| |
|
|||||||||| |||| |||||| | ||| | |||||||||| ||||| || |||| | | || ||||| || ||||||| || |||| || ||||| |
|
|
| T |
12528953 |
tgctgaagaaatatcctctatgattctatcacagatgcgagagattgcagatgcatttcttgagtcacctgttaagaatgcagtgattacggtgccagcg |
12528854 |
T |
|
| Q |
125 |
tattttagtgattctcaacgaaaagccactatagatgccggtgcaattgctggcatcaatgttataagggtaatgaatgaacccactgctgcagctgttg |
224 |
Q |
| |
|
||||| | |||||| || ||| |||||| | ||||| |||| ||||||||| ||||||| ||| || |||| || ||||| ||||| || ||| ||| |
|
|
| T |
12528853 |
tatttcaatgattcgcagcgacgagccaccaaggatgctggtgtcattgctggcctcaatgtaatacggataatcaacgaaccaactgcagctgctcttg |
12528754 |
T |
|
| Q |
225 |
catatggccttgacaagagagct |
247 |
Q |
| |
|
|||||||| || | ||||||||| |
|
|
| T |
12528753 |
catatggcattcaaaagagagct |
12528731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 249
Target Start/End: Complemental strand, 28910910 - 28910807
Alignment:
| Q |
146 |
aaagccactatagatgccggtgcaattg-ctggcatcaatgttataagggtaatgaatgaacccactgctgcagctgttgcatatggccttgacaagaga |
244 |
Q |
| |
|
|||||||| |||||||| ||||| |||| | ||| | |||||||| || |||| ||||| | |||||||| |||| || |||||||||| ||||||||| |
|
|
| T |
28910910 |
aaagccaccatagatgctggtgccattgtcaggctt-aatgttatgcggataatcaatgagctcactgctgtagctatttcatatggcctcgacaagaga |
28910812 |
T |
|
| Q |
245 |
gctga |
249 |
Q |
| |
|
||||| |
|
|
| T |
28910811 |
gctga |
28910807 |
T |
|
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