View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6042_low_3 (Length: 571)

Name: NF6042_low_3
Description: NF6042
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6042_low_3
NF6042_low_3
[»] chr2 (56 HSPs)
chr2 (178-358)||(2766935-2767115)
chr2 (180-358)||(17696209-17696387)
chr2 (178-358)||(14389047-14389227)
chr2 (178-358)||(39664711-39664891)
chr2 (178-358)||(44709708-44709888)
chr2 (181-358)||(42519168-42519346)
chr2 (178-358)||(16763077-16763256)
chr2 (178-358)||(19908209-19908390)
chr2 (178-358)||(40560224-40560404)
chr2 (178-358)||(39455170-39455350)
chr2 (178-358)||(6797508-6797688)
chr2 (213-344)||(16377174-16377305)
chr2 (180-358)||(37645490-37645668)
chr2 (178-327)||(37020509-37020658)
chr2 (178-266)||(16376737-16376825)
chr2 (178-266)||(39663155-39663243)
chr2 (180-259)||(19906685-19906764)
chr2 (178-283)||(19581415-19581520)
chr2 (178-266)||(14387350-14387438)
chr2 (178-266)||(16764611-16764699)
chr2 (178-302)||(24208061-24208185)
chr2 (178-266)||(34400315-34400403)
chr2 (178-302)||(6786000-6786124)
chr2 (178-266)||(39456780-39456868)
chr2 (180-267)||(37646477-37646564)
chr2 (180-266)||(6799408-6799494)
chr2 (392-549)||(27739085-27739242)
chr2 (178-266)||(24205599-24205687)
chr2 (187-314)||(17946104-17946231)
chr2 (401-475)||(31902961-31903035)
chr2 (180-296)||(31475049-31475166)
chr2 (191-360)||(37417287-37417456)
chr2 (178-266)||(6783365-6783453)
chr2 (178-266)||(37022185-37022273)
chr2 (178-266)||(40561878-40561966)
chr2 (233-360)||(29909601-29909728)
chr2 (233-314)||(7744099-7744180)
chr2 (178-266)||(2577480-2577568)
chr2 (405-469)||(29486399-29486463)
chr2 (233-360)||(39338-39465)
chr2 (255-358)||(62763-62866)
chr2 (214-293)||(41706576-41706655)
chr2 (252-358)||(15807862-15807968)
chr2 (187-360)||(25619670-25619843)
chr2 (252-358)||(32608010-32608116)
chr2 (233-353)||(92295-92415)
chr2 (187-355)||(361455-361623)
chr2 (180-283)||(162058-162160)
chr2 (178-217)||(42517559-42517598)
chr2 (187-358)||(42879366-42879536)
chr2 (214-360)||(15432365-15432511)
chr2 (423-476)||(2062251-2062304)
chr2 (259-358)||(862255-862354)
chr2 (187-301)||(11315335-11315449)
chr2 (260-314)||(13999890-13999944)
chr2 (233-293)||(15372555-15372615)
[»] chr3 (75 HSPs)
chr3 (178-358)||(27899044-27899224)
chr3 (178-358)||(21348724-21348904)
chr3 (178-358)||(53190723-53190902)
chr3 (178-358)||(51684611-51684791)
chr3 (179-358)||(43765139-43765318)
chr3 (178-358)||(23293133-23293313)
chr3 (178-355)||(17515311-17515488)
chr3 (178-358)||(46112488-46112668)
chr3 (178-358)||(54898438-54898617)
chr3 (178-355)||(30599884-30600061)
chr3 (178-358)||(2226116-2226295)
chr3 (180-358)||(42279510-42279688)
chr3 (190-358)||(35905676-35905843)
chr3 (178-358)||(41977751-41977930)
chr3 (180-358)||(2377032-2377210)
chr3 (231-358)||(48830769-48830896)
chr3 (178-358)||(44794209-44794388)
chr3 (209-346)||(46197752-46197889)
chr3 (178-358)||(3152181-3152361)
chr3 (183-358)||(2660218-2660393)
chr3 (251-358)||(44276159-44276266)
chr3 (178-358)||(600726-600890)
chr3 (255-358)||(7884837-7884939)
chr3 (178-266)||(3150253-3150341)
chr3 (178-266)||(23291571-23291659)
chr3 (178-266)||(30598338-30598426)
chr3 (180-266)||(42282473-42282559)
chr3 (178-266)||(2378983-2379071)
chr3 (178-266)||(38193510-38193598)
chr3 (178-266)||(41979352-41979440)
chr3 (178-266)||(46308808-46308896)
chr3 (178-266)||(46310436-46310524)
chr3 (178-266)||(53094273-53094361)
chr3 (178-266)||(53187743-53187831)
chr3 (180-266)||(54412547-54412633)
chr3 (187-360)||(31887393-31887566)
chr3 (187-312)||(48633887-48634012)
chr3 (178-266)||(611222-611310)
chr3 (178-266)||(44267982-44268070)
chr3 (178-266)||(46611303-46611391)
chr3 (178-266)||(54900074-54900162)
chr3 (224-343)||(19987572-19987691)
chr3 (187-358)||(40508854-40509025)
chr3 (187-360)||(23774162-23774334)
chr3 (187-360)||(23888713-23888886)
chr3 (178-266)||(38191896-38191984)
chr3 (178-258)||(51686402-51686482)
chr3 (187-266)||(17516973-17517052)
chr3 (188-358)||(5133007-5133177)
chr3 (182-266)||(2661908-2661992)
chr3 (178-266)||(44795890-44795978)
chr3 (178-266)||(46609150-46609238)
chr3 (178-258)||(48829357-48829437)
chr3 (178-266)||(46114105-46114194)
chr3 (178-266)||(28626412-28626500)
chr3 (178-266)||(35903826-35903914)
chr3 (178-266)||(53092624-53092712)
chr3 (233-360)||(33852611-33852738)
chr3 (260-358)||(5125884-5125982)
chr3 (187-312)||(2977318-2977443)
chr3 (178-266)||(7883329-7883417)
chr3 (178-238)||(7884927-7884987)
chr3 (178-266)||(21350605-21350693)
chr3 (178-266)||(27897152-27897239)
chr3 (187-266)||(48635375-48635454)
chr3 (187-360)||(18430212-18430385)
chr3 (187-300)||(45898349-45898462)
chr3 (187-300)||(51454251-51454364)
chr3 (255-312)||(54092764-54092821)
chr3 (187-293)||(33113188-33113294)
chr3 (187-293)||(41021011-41021117)
chr3 (260-314)||(41623735-41623789)
chr3 (241-314)||(23876965-23877038)
chr3 (187-300)||(24382894-24383007)
chr3 (180-265)||(35572525-35572610)
[»] chr8 (69 HSPs)
chr8 (178-367)||(13282479-13282667)
chr8 (178-358)||(8609751-8609930)
chr8 (178-358)||(13486062-13486242)
chr8 (180-358)||(26242277-26242455)
chr8 (180-355)||(41825610-41825785)
chr8 (178-354)||(22272335-22272513)
chr8 (178-358)||(7745075-7745255)
chr8 (178-350)||(41042555-41042727)
chr8 (180-358)||(42941777-42941955)
chr8 (178-358)||(38547229-38547408)
chr8 (178-358)||(13108300-13108479)
chr8 (178-358)||(5036446-5036630)
chr8 (190-358)||(9673128-9673296)
chr8 (178-358)||(27691155-27691335)
chr8 (178-356)||(33708769-33708946)
chr8 (231-355)||(40339646-40339770)
chr8 (178-266)||(42943426-42943514)
chr8 (178-258)||(34681074-34681154)
chr8 (178-283)||(26238727-26238832)
chr8 (178-266)||(5038062-5038149)
chr8 (178-266)||(35510819-35510907)
chr8 (178-266)||(29237152-29237240)
chr8 (178-266)||(33707207-33707295)
chr8 (178-266)||(35509215-35509303)
chr8 (187-360)||(37525964-37526137)
chr8 (178-266)||(601704-601792)
chr8 (178-266)||(22273891-22273979)
chr8 (178-266)||(27692837-27692925)
chr8 (178-266)||(33762713-33762801)
chr8 (178-266)||(38548831-38548919)
chr8 (178-258)||(41823891-41823971)
chr8 (180-266)||(9671980-9672066)
chr8 (178-266)||(8608238-8608327)
chr8 (187-360)||(38882738-38882911)
chr8 (178-266)||(13106805-13106893)
chr8 (178-266)||(29239187-29239275)
chr8 (178-266)||(33761070-33761158)
chr8 (187-352)||(31821428-31821593)
chr8 (178-266)||(13484546-13484634)
chr8 (224-360)||(33750325-33750461)
chr8 (178-258)||(43262145-43262225)
chr8 (180-266)||(13283995-13284081)
chr8 (178-283)||(27406935-27407040)
chr8 (187-360)||(42897715-42897888)
chr8 (195-311)||(15305815-15305931)
chr8 (178-266)||(15308261-15308349)
chr8 (195-311)||(15486184-15486300)
chr8 (178-266)||(15488630-15488718)
chr8 (423-553)||(37987530-37987660)
chr8 (187-360)||(462311-462484)
chr8 (396-469)||(9519057-9519130)
chr8 (239-354)||(9184445-9184560)
chr8 (178-236)||(600761-600819)
chr8 (240-358)||(11722752-11722870)
chr8 (252-358)||(37801541-37801647)
chr8 (214-293)||(31201151-31201230)
chr8 (240-358)||(11788384-11788502)
chr8 (180-266)||(27404213-27404299)
chr8 (187-293)||(33160156-33160262)
chr8 (252-358)||(44526694-44526800)
chr8 (187-288)||(5075378-5075479)
chr8 (178-266)||(41040721-41040809)
chr8 (255-314)||(15145749-15145808)
chr8 (187-266)||(44620671-44620750)
chr8 (214-312)||(8654537-8654634)
chr8 (399-469)||(34866632-34866702)
chr8 (384-465)||(10551748-10551829)
chr8 (196-260)||(10267857-10267921)
chr8 (399-475)||(34389588-34389664)
[»] chr5 (48 HSPs)
chr5 (178-358)||(36057556-36057736)
chr5 (178-358)||(17574319-17574498)
chr5 (178-358)||(8539676-8539856)
chr5 (178-358)||(34327636-34327816)
chr5 (178-358)||(2179788-2179968)
chr5 (182-358)||(30468223-30468399)
chr5 (178-358)||(7267844-7268023)
chr5 (29-169)||(38111096-38111236)
chr5 (180-358)||(18624951-18625129)
chr5 (178-358)||(24541154-24541335)
chr5 (178-358)||(2854271-2854449)
chr5 (178-266)||(30463901-30463989)
chr5 (178-266)||(12738736-12738824)
chr5 (178-266)||(12801559-12801647)
chr5 (178-266)||(8541271-8541359)
chr5 (178-266)||(34328827-34328915)
chr5 (180-311)||(40780553-40780684)
chr5 (178-327)||(29621755-29621904)
chr5 (178-266)||(2852887-2852975)
chr5 (178-266)||(21842992-21843080)
chr5 (178-266)||(28813765-28813855)
chr5 (180-266)||(28822090-28822176)
chr5 (187-360)||(18728543-18728716)
chr5 (178-283)||(42473625-42473730)
chr5 (178-266)||(7269446-7269534)
chr5 (178-266)||(32134232-32134320)
chr5 (180-264)||(41493847-41493931)
chr5 (281-358)||(28819391-28819468)
chr5 (187-268)||(43492131-43492212)
chr5 (178-266)||(40782211-40782299)
chr5 (187-357)||(38178037-38178207)
chr5 (187-357)||(38205261-38205431)
chr5 (187-360)||(32087524-32087697)
chr5 (178-266)||(29620139-29620227)
chr5 (187-306)||(15459184-15459303)
chr5 (436-553)||(697638-697755)
chr5 (252-360)||(38597020-38597128)
chr5 (179-266)||(17577935-17578022)
chr5 (187-360)||(35395343-35395514)
chr5 (227-312)||(35292371-35292456)
chr5 (187-300)||(38596878-38596991)
chr5 (187-300)||(43318061-43318174)
chr5 (187-302)||(27349166-27349281)
chr5 (178-248)||(42471549-42471619)
chr5 (187-266)||(32835886-32835965)
chr5 (407-509)||(22687217-22687319)
chr5 (187-353)||(33256410-33256576)
chr5 (178-218)||(28819349-28819389)
[»] chr1 (60 HSPs)
chr1 (178-358)||(2869580-2869760)
chr1 (178-358)||(6818621-6818801)
chr1 (178-358)||(25278311-25278491)
chr1 (178-358)||(37344343-37344523)
chr1 (178-358)||(27087284-27087463)
chr1 (178-358)||(31238438-31238618)
chr1 (178-358)||(4855910-4856089)
chr1 (178-358)||(34778082-34778261)
chr1 (178-358)||(50556040-50556220)
chr1 (178-358)||(3013413-3013599)
chr1 (182-337)||(51896116-51896271)
chr1 (180-358)||(33602587-33602765)
chr1 (178-358)||(46583499-46583679)
chr1 (231-358)||(15104495-15104622)
chr1 (180-355)||(52643566-52643736)
chr1 (178-279)||(25278975-25279076)
chr1 (178-266)||(31236820-31236908)
chr1 (178-311)||(47013072-47013205)
chr1 (178-266)||(26223588-26223676)
chr1 (178-327)||(9121642-9121791)
chr1 (178-266)||(25276743-25276831)
chr1 (178-266)||(50554164-50554252)
chr1 (178-258)||(52641889-52641969)
chr1 (178-257)||(25278855-25278934)
chr1 (180-266)||(3011858-3011944)
chr1 (187-360)||(36895451-36895624)
chr1 (178-266)||(34776570-34776658)
chr1 (178-266)||(46582011-46582099)
chr1 (178-264)||(8167943-8168029)
chr1 (187-360)||(31801643-31801816)
chr1 (178-266)||(4854411-4854499)
chr1 (178-266)||(8169568-8169656)
chr1 (178-266)||(9120040-9120128)
chr1 (178-266)||(27089279-27089367)
chr1 (178-266)||(37345962-37346050)
chr1 (178-245)||(6816866-6816933)
chr1 (188-266)||(33599229-33599307)
chr1 (180-266)||(51894570-51894656)
chr1 (178-239)||(33599188-33599249)
chr1 (187-360)||(42134492-42134665)
chr1 (233-358)||(51121961-51122086)
chr1 (178-266)||(2871076-2871164)
chr1 (178-258)||(37088144-37088224)
chr1 (178-266)||(47011457-47011545)
chr1 (233-360)||(46638748-46638875)
chr1 (178-237)||(45044950-45045009)
chr1 (260-358)||(43868697-43868795)
chr1 (178-266)||(1444181-1444269)
chr1 (216-360)||(45380925-45381069)
chr1 (407-545)||(19597878-19598016)
chr1 (195-293)||(27940626-27940724)
chr1 (396-474)||(31586273-31586351)
chr1 (187-360)||(18183885-18184057)
chr1 (399-475)||(41919892-41919968)
chr1 (178-240)||(1442551-1442613)
chr1 (407-509)||(24450450-24450551)
chr1 (187-293)||(47269464-47269570)
chr1 (252-358)||(51544210-51544316)
chr1 (213-266)||(42136246-42136299)
chr1 (178-266)||(23577637-23577725)
[»] chr6 (36 HSPs)
chr6 (178-358)||(20523367-20523547)
chr6 (181-358)||(10568403-10568580)
chr6 (178-358)||(6899486-6899666)
chr6 (178-358)||(11355223-11355403)
chr6 (178-358)||(32439035-32439214)
chr6 (178-358)||(32516878-32517058)
chr6 (178-358)||(13613525-13613705)
chr6 (180-346)||(7372913-7373079)
chr6 (231-358)||(9398714-9398841)
chr6 (192-358)||(14338418-14338584)
chr6 (255-358)||(7049835-7049938)
chr6 (178-266)||(9400035-9400123)
chr6 (178-311)||(32455881-32456014)
chr6 (178-283)||(6902881-6902985)
chr6 (178-283)||(10569902-10570007)
chr6 (178-266)||(11357194-11357282)
chr6 (178-266)||(32518497-32518585)
chr6 (195-311)||(3456766-3456882)
chr6 (178-266)||(7371176-7371264)
chr6 (178-266)||(32454249-32454337)
chr6 (180-258)||(21068628-21068706)
chr6 (178-258)||(13610691-13610771)
chr6 (178-266)||(18645104-18645191)
chr6 (178-266)||(20525334-20525422)
chr6 (224-360)||(3018373-3018509)
chr6 (178-266)||(3480657-3480745)
chr6 (178-256)||(7051255-7051333)
chr6 (178-240)||(8605351-8605413)
chr6 (178-245)||(32437141-32437208)
chr6 (252-358)||(11163875-11163981)
chr6 (181-255)||(33276805-33276879)
chr6 (180-215)||(21091109-21091144)
chr6 (219-360)||(2968181-2968322)
chr6 (181-238)||(7049790-7049847)
chr6 (256-358)||(25172052-25172154)
chr6 (187-293)||(29077338-29077444)
[»] chr4 (54 HSPs)
chr4 (180-358)||(41761689-41761867)
chr4 (178-358)||(49523125-49523305)
chr4 (178-358)||(51011927-51012106)
chr4 (178-353)||(41781540-41781715)
chr4 (178-354)||(48813788-48813964)
chr4 (178-354)||(35404392-35404568)
chr4 (196-358)||(48646690-48646852)
chr4 (226-358)||(42980684-42980816)
chr4 (180-358)||(11601674-11601851)
chr4 (178-358)||(43519425-43519605)
chr4 (196-358)||(52868092-52868254)
chr4 (180-358)||(2693196-2693373)
chr4 (178-258)||(48645256-48645336)
chr4 (178-266)||(49524733-49524821)
chr4 (178-266)||(35401750-35401838)
chr4 (178-266)||(319274-319362)
chr4 (178-266)||(4173740-4173828)
chr4 (178-266)||(20493828-20493916)
chr4 (178-266)||(43507168-43507256)
chr4 (178-266)||(43508653-43508741)
chr4 (187-266)||(39345574-39345653)
chr4 (178-266)||(33264383-33264471)
chr4 (178-266)||(51013886-51013974)
chr4 (178-263)||(320903-320988)
chr4 (178-266)||(4169687-4169775)
chr4 (180-358)||(7149542-7149720)
chr4 (214-360)||(35996100-35996246)
chr4 (178-267)||(20819986-20820075)
chr4 (178-266)||(33266010-33266098)
chr4 (182-266)||(43521109-43521193)
chr4 (180-267)||(2691377-2691463)
chr4 (195-293)||(44794768-44794866)
chr4 (181-266)||(11254123-11254208)
chr4 (178-266)||(833224-833312)
chr4 (178-266)||(5439647-5439735)
chr4 (178-266)||(42982452-42982540)
chr4 (241-360)||(2827468-2827587)
chr4 (187-300)||(44558494-44558607)
chr4 (178-266)||(5437812-5437900)
chr4 (178-293)||(835015-835130)
chr4 (233-312)||(2350496-2350575)
chr4 (255-314)||(44972489-44972548)
chr4 (214-293)||(47941848-47941927)
chr4 (187-293)||(10372714-10372820)
chr4 (423-477)||(38929123-38929177)
chr4 (396-469)||(31051223-31051296)
chr4 (277-360)||(4519476-4519559)
chr4 (255-358)||(26296837-26296940)
chr4 (494-553)||(46699597-46699656)
chr4 (187-293)||(10762591-10762697)
chr4 (189-283)||(54387865-54387958)
chr4 (216-289)||(27624845-27624918)
chr4 (314-358)||(11255883-11255927)
chr4 (255-307)||(50131240-50131292)
[»] chr7 (70 HSPs)
chr7 (178-358)||(39859172-39859352)
chr7 (178-358)||(38474086-38474266)
chr7 (178-357)||(45359337-45359516)
chr7 (178-354)||(47386156-47386332)
chr7 (180-358)||(24228352-24228530)
chr7 (178-358)||(6602336-6602516)
chr7 (180-358)||(34776858-34777036)
chr7 (180-358)||(37796124-37796302)
chr7 (178-355)||(30940371-30940548)
chr7 (178-337)||(37115490-37115649)
chr7 (199-358)||(13168142-13168304)
chr7 (178-358)||(27666008-27666188)
chr7 (178-358)||(56331-56511)
chr7 (178-358)||(29996457-29996637)
chr7 (218-358)||(35693313-35693455)
chr7 (233-354)||(48852294-48852415)
chr7 (178-266)||(13169683-13169771)
chr7 (180-266)||(39857648-39857734)
chr7 (178-266)||(24226582-24226670)
chr7 (255-358)||(23906204-23906307)
chr7 (180-266)||(48227941-48228027)
chr7 (178-266)||(37113942-37114030)
chr7 (178-327)||(20478043-20478192)
chr7 (178-266)||(23904584-23904672)
chr7 (178-266)||(35403619-35403707)
chr7 (178-266)||(46437108-46437196)
chr7 (178-266)||(47384295-47384383)
chr7 (187-358)||(33038740-33038911)
chr7 (180-266)||(6605397-6605483)
chr7 (180-314)||(13018036-13018172)
chr7 (181-266)||(35691431-35691516)
chr7 (178-266)||(22155847-22155935)
chr7 (178-266)||(22211762-22211850)
chr7 (287-358)||(46439473-46439544)
chr7 (178-260)||(46439539-46439621)
chr7 (186-267)||(13039641-13039722)
chr7 (187-360)||(46996643-46996816)
chr7 (178-266)||(34774999-34775087)
chr7 (178-266)||(35401970-35402058)
chr7 (187-360)||(23953815-23953988)
chr7 (178-283)||(38549548-38549653)
chr7 (178-266)||(78014-78102)
chr7 (178-266)||(20479719-20479807)
chr7 (180-266)||(27664433-27664519)
chr7 (399-475)||(3420234-3420310)
chr7 (405-469)||(38484991-38485055)
chr7 (192-347)||(1546302-1546457)
chr7 (214-360)||(2167516-2167662)
chr7 (187-360)||(27955380-27955553)
chr7 (255-358)||(6056844-6056947)
chr7 (178-237)||(29994907-29994966)
chr7 (227-360)||(40784396-40784529)
chr7 (178-263)||(45361279-45361364)
chr7 (178-238)||(23906295-23906355)
chr7 (250-358)||(23962377-23962485)
chr7 (196-266)||(48311733-48311803)
chr7 (400-469)||(38305676-38305745)
chr7 (187-312)||(47341675-47341800)
chr7 (255-314)||(31913547-31913606)
chr7 (180-267)||(37791657-37791744)
chr7 (240-287)||(43009347-43009394)
chr7 (219-293)||(35344298-35344372)
chr7 (407-476)||(1320133-1320202)
chr7 (255-292)||(31915047-31915084)
chr7 (178-207)||(35693435-35693464)
chr7 (187-284)||(38613498-38613595)
chr7 (187-283)||(7401903-7401999)
chr7 (233-293)||(8423289-8423349)
chr7 (436-476)||(10243541-10243581)
chr7 (214-266)||(33775445-33775497)
[»] scaffold1454 (1 HSPs)
scaffold1454 (180-358)||(1266-1443)
[»] scaffold0564 (1 HSPs)
scaffold0564 (179-358)||(8264-8441)
[»] scaffold0058 (3 HSPs)
scaffold0058 (178-354)||(3295-3471)
scaffold0058 (178-354)||(4467-4643)
scaffold0058 (178-266)||(14343-14431)
[»] scaffold0345 (1 HSPs)
scaffold0345 (178-266)||(1555-1643)
[»] scaffold0081 (1 HSPs)
scaffold0081 (178-266)||(54258-54346)
[»] scaffold0024 (1 HSPs)
scaffold0024 (255-358)||(37282-37385)
[»] scaffold0002 (1 HSPs)
scaffold0002 (184-253)||(436272-436341)
[»] scaffold0092 (1 HSPs)
scaffold0092 (252-358)||(36793-36899)
[»] scaffold1712 (1 HSPs)
scaffold1712 (178-266)||(983-1071)
[»] scaffold0204 (1 HSPs)
scaffold0204 (255-314)||(30458-30517)
[»] scaffold0129 (1 HSPs)
scaffold0129 (255-358)||(4537-4640)


Alignment Details
Target: chr2 (Bit Score: 157; Significance: 3e-83; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 178 - 358
Target Start/End: Original strand, 2766935 - 2767115
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  2766935 actaatagctcaaattcgtccttgaatttttaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtct 2767034  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  2767035 atcaaaatggtccctctgtccaaaagctccgttagtggtgatgatgtgtcctcttgtatgttgtgttgtcctgtacacgtg 2767115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 180 - 358
Target Start/End: Original strand, 17696209 - 17696387
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccat 279  Q
    |||||||||||||||||||||||||||||||||||||| |||| || ||| |||||||||  ||||||||||||||||||||||||||||||||||| ||    
T  17696209 taatacctcaaattcgtccttgaattttcaaaaatcggccaaattcatccctgaattttggaaaatatctatttagtccctgaattttacaaacgtcaat 17696308  T
Q  280 caaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||| ||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  17696309 caaaatggtcactccgtccaaaagctccgttagtggtgatgatgtgtcatcttgcatgttgtgttgtcctgtacacgtg 17696387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 178 - 358
Target Start/End: Complemental strand, 14389227 - 14389047
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||| ||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  14389227 actaatacctcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttccaaatgtcc 14389128  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||||||| ||||||||| | ||||||| ||| ||||||||||||||||||||||||||||| ||||||||||    
T  14389127 atcaaaatggtccctccgtccaaaagtttcgttagtagtgatgatgtgtcctcttgcatgttgtgttgtcttgtacacgtg 14389047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 178 - 358
Target Start/End: Complemental strand, 39664891 - 39664711
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||||||||||||| ||||||||| |||| ||||||  ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  39664891 actaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccccgaattttacgaaatatctatttagtccctgaattttacagacgtcc 39664792  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||  | ||||||||| ||||||||||    
T  39664791 atcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgtgtcctcttgctagctgtgttgtcatgtacacgtg 39664711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 178 - 358
Target Start/End: Complemental strand, 44709888 - 44709708
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||||||||||||| ||||| ||| |||| ||| || |||||||||||||||| ||||||||||||||||||||||| ||||||    
T  44709888 actaatacctcaaattcgtccttgaattttaaaaaaccggccaaattcggccctgaattttgcgaaataactatttagtccctgaattttacagacgtcc 44709789  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||||||| ||||||||||| ||||||||||| |||| |||||||||||||||||||||||| ||||||||||    
T  44709788 atcaaaatggtccctccgtccaaaagcttcgttagtggtgatgatatgtcctcttgcatgttgtgttgtcttgtacacgtg 44709708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 181 - 358
Target Start/End: Complemental strand, 42519346 - 42519168
Alignment:
Q  181 aatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaatttt-gcgaaatatctatttagtccctgaattttacaaacgtccat 279  Q
    ||||||||||||||||||||||||||| |||||| | ||||| | ||||||||||||| || ||||||||||||||||||||||||||||| ||||||||    
T  42519346 aatacctcaaattcgtccttgaattttaaaaaattgatcaaattagtccttgaatttttgcaaaatatctatttagtccctgaattttacagacgtccat 42519247  T
Q  280 caaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    ||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  42519246 caaaatggtccctccatccaaaagctccgttagtggtgatgatgtgtcctcttgcatgctgtgttgtcctgtacacgtg 42519168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 178 - 358
Target Start/End: Original strand, 16763077 - 16763256
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  16763077 actaatacctcaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtcc 16763176  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||||||| |||||||| ||| |||||||| | ||| |||||| |||||||||||| ||||| ||||||||||    
T  16763177 atcaaaatggtccctccgtccaaaatctctgttagtggcgatgacgtgtcc-cttgcatgttgttttgtcttgtacacgtg 16763256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 178 - 358
Target Start/End: Complemental strand, 19908390 - 19908209
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaa-tcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtc 276  Q
    |||||||||||||||||||||||||||||| ||||| |||| |||| | |||| |||||||||||||||||||||||||||| ||||||||||| |||||    
T  19908390 actaatacctcaaattcgtccttgaattttaaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacgtc 19908291  T
Q  277 catcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    | ||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||| ||||||||| ||||||||||    
T  19908290 cgtcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtcctcttgcatgctgtgttgtcatgtacacgtg 19908209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 178 - 358
Target Start/End: Original strand, 40560224 - 40560404
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||| ||||||||||| ||||||||| ||||||| | |||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  40560224 actaatacttcaaattcgtctttgaattttaaaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtcc 40560323  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||| ||||||| ||||||||| || |||||||||| ||||||||||||||||||| ||||||||| ||||| ||||    
T  40560324 atcaaaatagtccctccgtccaaaagttctgttagtggtgatgatgtgtcctcttgcatgctgtgttgtcatgtacgcgtg 40560404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 178 - 358
Target Start/End: Original strand, 39455170 - 39455350
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactc-gtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtc 276  Q
    ||||||| |||||||| ||||||||||||| |||||||||| ||| || ||||| ||||||||| ||||||||||||||||| ||||||||||| |||||    
T  39455170 actaatatctcaaatttgtccttgaattttaaaaaatcggttaaattcagtcct-gaattttgcaaaatatctatttagtccatgaattttacagacgtc 39455268  T
Q  277 catcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    ||||||||||||| ||| || |||||||||||||||||| | ||||||| ||||||||||||||||||||| ||||||||||    
T  39455269 catcaaaatggtctctccgttcaaaagctccgttagtggcgatgatgtgccctcttgcatgttgtgttgtcatgtacacgtg 39455350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 178 - 358
Target Start/End: Original strand, 6797508 - 6797688
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||| |||||| |  ||||||||| |||||| ||  ||| |||| | |||||||||||||||||||||||||||||| ||||||||| |||||     
T  6797508 actaataccttaaattcatatttgaattttaaaaaattggctaaattcgttcctgaattttgcgaaatatctatttagtcccttaattttacagacgtct 6797607  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    ||||||||||| |||| |||||||||||| ||||  |||| |||||| |||||||||||| ||||||||| ||||||||||    
T  6797608 atcaaaatggttcctccgtccaaaagctctgttacgggtgatgatgtatcctcttgcatgatgtgttgtcttgtacacgtg 6797688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 213 - 344
Target Start/End: Complemental strand, 16377305 - 16377174
Alignment:
Q  213 atcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttag 312  Q
    |||||||||| | |||| |||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  16377305 atcggtcaaatttgtccctgaattttgcaaaatatctatttagtccttgaattttacatacgtccatcaaaatggtccctccgtccaaaagctccgttag 16377206  T
Q  313 tggtggtgatgtgtcctcttgcatgttgtgtt 344  Q
    ||||| ||| |||| |||||||||| ||||||    
T  16377205 tggtgatgacgtgttctcttgcatgctgtgtt 16377174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 180 - 358
Target Start/End: Original strand, 37645490 - 37645668
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccat 279  Q
    ||||||| ||| |||||||||||||||| ||||||| ||| || |||||||| ||||||  |||||||||||||||||| |||||||| || | ||  ||    
T  37645490 taataccccaacttcgtccttgaatttttaaaaatcagtcgaattcgtccttaaattttaggaaatatctatttagtccttgaattttgcagatgtttat 37645589  T
Q  280 caaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||| ||||||| ||||| |||||| |||| || || ||||||||| ||||| ||| ||||||||||||||||||||    
T  37645590 caaaattgtccctccgtccataagctctgttattgatgatgatgtgtcatcttgtatgctgtgttgtcctgtacacgtg 37645668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 178 - 327
Target Start/End: Original strand, 37020509 - 37020658
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||| | ||||||||||||| |||||||||||||  | |||||||||||||  |||||||| | |||||||||||||||| || ||||||    
T  37020509 actaatacctcaaaatagtccttgaattttgaaaaatcggtcaattttgtccttgaattttttgaaatatcaaattagtccctgaattttgcagacgtcc 37020608  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtc 327  Q
    ||||||   ||||||| ||||||||  ||||||| | ||| |||||||||    
T  37020609 atcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 37020658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 16376737 - 16376825
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||| ||||||||| |||||||||||||| |||||| |||||||| ||||||| |||||||||||||||||||    
T  16376737 actaatacctcaaattcgtctttgaattttaaaaaatcggtcaaattcgtccctgaattttacgaaatagctatttagtccctgaattt 16376825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 39663155 - 39663243
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||| ||||||||||||||||||| |||||||||||||| |||||| |||||||||| ||||| |||||||||||||||||||    
T  39663155 actaatacctaaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaattt 39663243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 180 - 259
Target Start/End: Original strand, 19906685 - 19906764
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccc 259  Q
    |||||||| ||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  19906685 taataccttaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccc 19906764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 178 - 283
Target Start/End: Original strand, 19581415 - 19581520
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    ||||||||||||||||||||||| |||||| ||||||| | |||| | |||| ||||||||||||||||||||||||||||  ||||||  |||| ||||    
T  19581415 actaatacctcaaattcgtccttaaatttttaaaaatcagccaaatttgtccctgaattttgcgaaatatctatttagtcctcgaatttaccaaatgtcc 19581514  T
Q  278 atcaaa 283  Q
    ||||||    
T  19581515 atcaaa 19581520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 14387350 - 14387438
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| ||||||||| |||  |||||| |||||||| ||||||||| | |||||||||||||||    
T  14387350 actaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 14387438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 16764699 - 16764611
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| | ||||||| |||  |||||| |||||||||||||||||| | |||||||||||||||    
T  16764699 actaatacctcaaattcgtccttgaattttgagaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 16764611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 178 - 302
Target Start/End: Complemental strand, 24208185 - 24208061
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||| |  |||||||||||| ||||||||| |||  |||||| |||||| | ||||||||| | ||||||||||||||||||| ||||||    
T  24208185 actaatacctcaaaatactccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattttacagacgtcc 24208086  T
Q  278 atcaaaatggtccctctgtccaaaa 302  Q
    ||||||   ||||||| ||||||||    
T  24208085 atcaaatcagtccctccgtccaaaa 24208061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 34400315 - 34400403
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    ||||||||||||||||| |||||||||||||||||||||| |||| || ||| |||||||||||||||| |||||| |||| |||||||    
T  34400315 actaatacctcaaattcatccttgaattttcaaaaatcggccaaattcatccctgaattttgcgaaatagctattttgtccttgaattt 34400403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 178 - 302
Target Start/End: Complemental strand, 6786124 - 6786000
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||| | ||||||||||||| ||||||||| |||  |||||| | |||| |  |||||||| | ||||||||||||||||||| ||||||    
T  6786124 actaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtcccttaattatttgaaatatcaaattagtccctgaattttacagacgtcc 6786025  T
Q  278 atcaaaatggtccctctgtccaaaa 302  Q
    ||||||   ||||||| ||||||||    
T  6786024 atcaaatcagtccctccgtccaaaa 6786000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 39456868 - 39456780
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||| |||||||| |||||||||||| |||||| ||| ||| |||||| |||||||||| ||||| |||||||||||||||||||    
T  39456868 actaatacttcaaattcatccttgaattttaaaaaattggttaaattcgtccatgaattttgcaaaatagctatttagtccctgaattt 39456780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 180 - 267
Target Start/End: Complemental strand, 37646564 - 37646477
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaatttt 267  Q
    ||||||| ||| ||||| |||||| ||||||||||| |||||| |||||||  |||| ||||||||||||||||||||||||||||||    
T  37646564 taataccccaacttcgttcttgaactttcaaaaatcagtcaaattcgtcctcaaattctgcgaaatatctatttagtccctgaatttt 37646477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 180 - 266
Target Start/End: Complemental strand, 6799494 - 6799408
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    ||||| |||||||||||||||||||||| ||||||||| |||| |||||| |||||||||| ||||| |||||| |||| |||||||    
T  6799494 taatatctcaaattcgtccttgaatttttaaaaatcggacaaattcgtccatgaattttgccaaatagctattttgtccttgaattt 6799408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 392 - 549
Target Start/End: Complemental strand, 27739242 - 27739085
Alignment:
Q  392 aaatcacaaatctagaggaagacgaaaccagacaacaaaacataggcagcgacgctggtccgaagcggaaacacaacctagatcgataaaaggcatctgt 491  Q
    |||||||||||| ||||||||| ||||||| ||||||||||| |||||||||||  |  | ||||||||||||||||  ||||||| ||||||   |       
T  27739242 aaatcacaaatcaagaggaagatgaaaccaaacaacaaaacacaggcagcgacgtcgccctgaagcggaaacacaacgcagatcgaaaaaaggtggccac 27739143  T
Q  492 tggtgacaaggagaaggctgtcgtcgccgaagtaaatatcaactaaaccaaaaagcga 549  Q
    | |||||||| |||||||  | ||||||  |||||| |||||| ||||||||||||||    
T  27739142 tagtgacaagaagaaggcgtttgtcgccagagtaaacatcaaccaaaccaaaaagcga 27739085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 24205599 - 24205687
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||| | ||||||||||||| ||||||||| |||  |||||| |||||||| ||||||||| | |||||||||||||||    
T  24205599 actaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 24205687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 187 - 314
Target Start/End: Original strand, 17946104 - 17946231
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    |||| ||||||| ||||||| |||  ||| |  ||| |||||||| |||||||| ||||||| |||| ||||||||||||  |  | |||||||||||||    
T  17946104 tcaacttcgtccctgaatttgcaagcatcagctaaaatcgtccttaaattttgcaaaatatcaattttgtccctgaatttctctcatgtccatcaaaatg 17946203  T
Q  287 gtccctctgtccaaaagctccgttagtg 314  Q
    ||||||| ||||||||| ||||||||||    
T  17946204 gtccctccgtccaaaaggtccgttagtg 17946231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 401 - 475
Target Start/End: Original strand, 31902961 - 31903035
Alignment:
Q  401 atctagaggaagacgaaaccagacaacaaaacataggcagcgacgctggtccgaagcggaaacacaacctagatc 475  Q
    ||||||||||||||||||||  |||||||||||  ||||||||||| |||  |||||||||||||||||||||||    
T  31902961 atctagaggaagacgaaacccaacaacaaaacacgggcagcgacgccggtttgaagcggaaacacaacctagatc 31903035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 180 - 296
Target Start/End: Complemental strand, 31475166 - 31475049
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaatttt-acaaacgtcca 278  Q
    ||||||||||| ||||| ||| |||||||||||||| |||||| |||||    ||||||| |||||||||||||| |||||||||||| | ||| ||| |    
T  31475166 taatacctcaacttcgttctttaattttcaaaaatcagtcaaattcgtcaccaaattttgagaaatatctatttaatccctgaattttcaaaaatgtcaa 31475067  T
Q  279 tcaaaatggtccctctgt 296  Q
    |||||  |||||||||||    
T  31475066 tcaaatcggtccctctgt 31475049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 191 - 360
Target Start/End: Original strand, 37417287 - 37417456
Alignment:
Q  191 attcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtcc 290  Q
    |||||||||||||||||||    |||| |||| || ||| | |||| ||||||||||| | |||||||||||||||  || ||||||||||||| |||||    
T  37417287 attcgtccttgaattttcatgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtcc 37417386  T
Q  291 ctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtggc 360  Q
    ||  ||||||  ||||||||||   || |||| |||   | |||||| ||||||||| ||||||||||||    
T  37417387 cttcgtccaagtgctccgttagccatgctgatctgttgccctgcatgctgtgttgtcttgtacacgtggc 37417456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 6783365 - 6783453
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||| | ||||||||||||| |||||||||||||  |||||| |||||| | | ||||||| | |||||||||||||||    
T  6783365 actaatacctcaaaatagtccttgaattttaaaaaatcggtcaatttcgtccctgaattattcaaaatatcaaattagtccctgaattt 6783453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 37022273 - 37022185
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||| | ||||||||||||| ||||||||  |||  |||||| |||||||| ||||||||| | |||||||||||||||    
T  37022273 actaatacctcaaaatagtccttgaattttgaaaaatcgaccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 37022185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 40561966 - 40561878
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||| ||||||||| ||||||||| |||  |||||  ||||||||| |||||| | | |||||||||||||||    
T  40561966 actaatacctcaaattcgtctttgaattttgaaaaatcggccaatttcgtctctgaattttgtgaaatagcaaattagtccctgaattt 40561878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 233 - 360
Target Start/End: Complemental strand, 29909728 - 29909601
Alignment:
Q  233 aattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctctt 332  Q
    |||| ||||||||||| ||||||||||| |||||  || ||||||||||||| |||||||| ||||||  |||| |||||   || |||| ||||   ||    
T  29909728 aattatgcgaaatatcaatttagtcccttaatttgtcagacgtccatcaaaaaggtccctccgtccaagtgctctgttagccatgttgatctgtcgcgtt 29909629  T
Q  333 gcatgttgtgttgtcctgtacacgtggc 360  Q
    ||||||||||||||| ||||| ||||||    
T  29909628 gcatgttgtgttgtcttgtacgcgtggc 29909601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 233 - 314
Target Start/End: Original strand, 7744099 - 7744180
Alignment:
Q  233 aattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtg 314  Q
    |||||||||||||||| |||| ||||||||||||  |  | ||||||||||||||||||||  |||||||| ||||||||||    
T  7744099 aattttgcgaaatatcaatttcgtccctgaatttctctcatgtccatcaaaatggtccctccatccaaaaggtccgttagtg 7744180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 2577568 - 2577480
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||| | ||||||||||||| ||||||||  |||  |||||| ||||||||  |||||||| | |||||||||||||||    
T  2577568 actaatacctcaaaatagtccttgaattttgaaaaatcgtccaatttcgtccctgaattttttgaaatatcaaattagtccctgaattt 2577480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 405 - 469
Target Start/End: Complemental strand, 29486463 - 29486399
Alignment:
Q  405 agaggaagacgaaaccagacaacaaaacataggcagcgacgctggtccgaagcggaaacacaacc 469  Q
    ||||| ||||||||||| |||||||||| | ||||||||||| |||| |||||||||||||||||    
T  29486463 agagggagacgaaaccaaacaacaaaacttgggcagcgacgccggtctgaagcggaaacacaacc 29486399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 233 - 360
Target Start/End: Complemental strand, 39465 - 39338
Alignment:
Q  233 aattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctctt 332  Q
    |||| ||||||||||| | |||||||||||||||  || |||| |||||||| |||||| | ||||||  | ||||||||   || |||| |||| ||||    
T  39465 aattatgcgaaatatcaacttagtccctgaatttgtcagacgttcatcaaaaaggtccccccgtccaagtgttccgttagccatgctgatatgtcgtctt 39366  T
Q  333 gcatgttgtgttgtcctgtacacgtggc 360  Q
    ||||| ||||||||| ||||| ||||||    
T  39365 gcatgctgtgttgtcttgtacgcgtggc 39338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 255 - 358
Target Start/End: Complemental strand, 62866 - 62763
Alignment:
Q  255 gtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtaca 354  Q
    |||||||||||| |||||||||||||||||| |||| || ||||||| |||||| ||||| || |||  |||| || |||||||  ||||| | ||||||    
T  62866 gtccctgaatttaacaaacgtccatcaaaatagtccttccgtccaaatgctccgctagtgctgctgagttgtcgtcatgcatgtcatgttgccttgtaca 62767  T
Q  355 cgtg 358  Q
    ||||    
T  62766 cgtg 62763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 214 - 293
Target Start/End: Original strand, 41706576 - 41706655
Alignment:
Q  214 tcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctc 293  Q
    ||||||||| |||||| | |||| ||||||||||| ||||| |||||||||||  | |||||||||||||| ||||||||    
T  41706576 tcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcgaacgtccatcaaaaaggtccctc 41706655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 252 - 358
Target Start/End: Complemental strand, 15807968 - 15807862
Alignment:
Q  252 ttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgt 351  Q
    ||||||||||||||| ||||||||| |||||| | |||| || ||||||| || |||||||||||| |||  |||| || ||||||   ||||||| |||    
T  15807968 ttagtccctgaatttaacaaacgtcaatcaaattagtccttccgtccaaatgcaccgttagtggtgctgagttgtcttcctgcatgacttgttgtcttgt 15807869  T
Q  352 acacgtg 358  Q
    |||||||    
T  15807868 acacgtg 15807862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 187 - 360
Target Start/End: Original strand, 25619670 - 25619843
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    ||||||||||||||||||||| |    ||||||||| || ||| | |||| ||| ||||||| | |||||||||||||||  || | ||||||||||| |    
T  25619670 tcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgtcatatgtccatcaaaaag 25619769  T
Q  287 gtccctctgtccaaaagctccgttagtggtggtgatgtgtc-ctcttgcatgttgtgttgtcctgtacacgtggc 360  Q
    |||||||  |||||  ||||||||||   || |||| |||| ||| ||||||||| |||||| | ||||||||||    
T  25619770 gtccctccatccaagtgctccgttagccatgttgatctgtcgctc-tgcatgttgcgttgtcttatacacgtggc 25619843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 252 - 358
Target Start/End: Complemental strand, 32608116 - 32608010
Alignment:
Q  252 ttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgt 351  Q
    ||||||||||||||| ||||||||| |||||| | |||| || ||||||| || |||||||||||| |||  |||| || ||||||   ||||||| |||    
T  32608116 ttagtccctgaatttaacaaacgtcaatcaaattagtccttccgtccaaatgcaccgttagtggtgctgagttgtcttcctgcatggcttgttgtcttgt 32608017  T
Q  352 acacgtg 358  Q
    |||||||    
T  32608016 acacgtg 32608010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 233 - 353
Target Start/End: Complemental strand, 92415 - 92295
Alignment:
Q  233 aattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctctt 332  Q
    |||| ||||||||||| | ||||||  |||||||  || |||| |||||||| |||||||| ||||||  ||||||||||   || |||| |||| ||||    
T  92415 aattatgcgaaatatcaacttagtctttgaatttgtcagacgttcatcaaaaaggtccctcagtccaagtgctccgttagccatgctgatatgtcgtctt 92316  T
Q  333 gcatgttgtgttgtcctgtac 353  Q
    ||||| ||||||||| |||||    
T  92315 gcatgctgtgttgtcttgtac 92295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 187 - 355
Target Start/End: Original strand, 361455 - 361623
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    |||| ||||||||||||||||||  |||||| |||| || ||| | |||| || |||||||| | ||||||  ||||||   || |||||||||||  |     
T  361455 tcaacttcgtccttgaattttcatgaatcggccaaaatcatccctcaattatgtgaaatatcaaattagtcattgaattcgtcagacgtccatcaattta 361554  T
Q  287 gtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacac 355  Q
    |||||||||||||| |  || |||| ||||| ||| ||||| || ||||||||||| |||  |||||||    
T  361555 gtccctctgtccaatatatctgttaatggtgatgaggtgtcttcctgcatgttgtgatgtgttgtacac 361623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 180 - 283
Target Start/End: Complemental strand, 162160 - 162058
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccat 279  Q
    |||||| |||| |||||| ||||||||||||||||| |||||| ||| ||   |||||| | ||||||||||||||| | ||||||||  ||||||| ||    
T  162160 taatacttcaatttcgtc-ttgaattttcaaaaatcagtcaaattcgaccccaaattttacaaaatatctatttagttcttgaattttcaaaacgtcaat 162062  T
Q  280 caaa 283  Q
    ||||    
T  162061 caaa 162058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 178 - 217
Target Start/End: Original strand, 42517559 - 42517598
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcgg 217  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  42517559 actaatacctcaaattcgtccttgaatttttaaaaatcgg 42517598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 358
Target Start/End: Original strand, 42879366 - 42879536
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    |||||||||||||| |||||| |    ||||||||| || ||| | |||| ||||||| ||| | ||||||  |||||||  || ||||||||||||| |    
T  42879366 tcaaattcgtccttaaatttttacgggtcggtcaaattcatcccttaattatgcgaaa-atcaacttagtctatgaatttgtcagacgtccatcaaaaag 42879464  T
Q  287 gtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    ||||||| ||||||  | |||||||||  || |||| ||||  | |||||| ||||||||| ||||||||||    
T  42879465 gtccctccgtccaagtgttccgttagtcatgctgatatgtcgccctgcatgctgtgttgtcttgtacacgtg 42879536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 214 - 360
Target Start/End: Original strand, 15432365 - 15432511
Alignment:
Q  214 tcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagt 313  Q
    ||||||||| || ||| | |||| ||||||||||| |||||||| ||||||||  || ||||||||||||| ||| | |  ||||||  ||||  |||||    
T  15432365 tcggtcaaattcatccctcaattatgcgaaatatcaatttagtctctgaatttgtcagacgtccatcaaaaaggttcattcgtccaagtgctctattagt 15432464  T
Q  314 ggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtggc 360  Q
      || |||  ||||  | |||||||||||||||| ||||||||||||    
T  15432465 catgctgacatgtcgccctgcatgttgtgttgtcttgtacacgtggc 15432511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 423 - 476
Target Start/End: Complemental strand, 2062304 - 2062251
Alignment:
Q  423 acaacaaaacataggcagcgacgctggtccgaagcggaaacacaacctagatcg 476  Q
    |||||||||||  ||||||||||| |||| ||||||||||||||||| ||||||    
T  2062304 acaacaaaacacgggcagcgacgccggtctgaagcggaaacacaacccagatcg 2062251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 358
Target Start/End: Complemental strand, 862354 - 862255
Alignment:
Q  259 ctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||| | ||||||| |||||||| |||| || ||||||| |||||||||||| || |||  |||| || ||||||   ||||||| ||||||||||    
T  862354 ctgaatttaataaacgtcaatcaaaatagtccttccgtccaaatgctccgttagtgctgttgagttgtcttcctgcatggcttgttgtcttgtacacgtg 862255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 301
Target Start/End: Complemental strand, 11315449 - 11315335
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    |||| ||||||||| |||||| |  |||||| |||| |||| |   |||||  ||||||||| |  |||| |||||||||  || |||||||||||||||    
T  11315449 tcaacttcgtccttaaatttttatgaatcggccaaattcgttccctaatttaacgaaatatcaaaatagttcctgaatttgtcagacgtccatcaaaatg 11315350  T
Q  287 gtccctctgtccaaa 301  Q
    ||||||| |||||||    
T  11315349 gtccctccgtccaaa 11315335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 260 - 314
Target Start/End: Original strand, 13999890 - 13999944
Alignment:
Q  260 tgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtg 314  Q
    ||||||| |||||||||||||||||| |||| || ||||||| ||||| ||||||    
T  13999890 tgaatttaacaaacgtccatcaaaatagtccttccgtccaaatgctccattagtg 13999944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 233 - 293
Target Start/End: Original strand, 15372555 - 15372615
Alignment:
Q  233 aattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctc 293  Q
    |||| ||| ||||||| ||||| |||||||||||  || ||||||||||||| ||||||||    
T  15372555 aattatgcaaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctc 15372615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 145; Significance: 5e-76; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 178 - 358
Target Start/End: Complemental strand, 27899224 - 27899044
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27899224 actaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtcc 27899125  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    || ||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||    
T  27899124 ataaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtcctcttgcatgttgtgttgtcatgtacacgtg 27899044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 178 - 358
Target Start/End: Original strand, 21348724 - 21348904
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||| ||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21348724 actaatacctcaaatttgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtcc 21348823  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||||||| |||||||||||| |||||||||| | ||||||||||||||||||||||||||| ||||||||||    
T  21348824 atcaaaatggtccctccgtccaaaagctctgttagtggtgataatgtgtcctcttgcatgttgtgttgtcatgtacacgtg 21348904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 178 - 358
Target Start/End: Complemental strand, 53190902 - 53190723
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||||||||||||| ||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  53190902 actaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtcc 53190803  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||||||| ||||||||||||||||||||||| ||| |||||| |||||||||||||||||| ||||||||||    
T  53190802 atcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtcc-cttgcatgttgtgttgtcttgtacacgtg 53190723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 178 - 358
Target Start/End: Original strand, 51684611 - 51684791
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    ||||||| |||||||||||||||||||||||||||||| | |||| || ||| |||||||||| ||||||||||||||||| ||||||||||| ||||||    
T  51684611 actaatatctcaaattcgtccttgaattttcaaaaatcagccaaattcatccctgaattttgcaaaatatctatttagtccttgaattttacagacgtcc 51684710  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  51684711 atcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgtgtcctcttgcgtgttgtgttgtcctgtacacgtg 51684791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 179 - 358
Target Start/End: Original strand, 43765139 - 43765318
Alignment:
Q  179 ctaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcca 278  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |  |||||||||||||||||||||||||  |||||||||||| |||||||    
T  43765139 ctaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgttccggaattttgcgaaatatctatttagtttctgaattttacagacgtcca 43765238  T
Q  279 tcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||||||  |||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||    
T  43765239 tcaaaatggtccctccatccaaaagctccgttagtggtgatgatgtgtcctcttacatgttgtgttgtcatgtacacgtg 43765318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 178 - 358
Target Start/End: Complemental strand, 23293313 - 23293133
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||| || |||||||||  ||||||| | |||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23293313 actaatacctcaaatttgttcttgaatttcgaaaaatcagccaaattcgcccttgaattttgcgaaatatctatttagtccatgaattttacaaacgtcc 23293214  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  23293213 atcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgtgtcctcttgcatgttgtgttgtcatgtacacgtg 23293133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 178 - 355
Target Start/End: Original strand, 17515311 - 17515488
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    ||||||||||||||||| |||||||||||| |||||| || |||| || ||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  17515311 actaatacctcaaattcttccttgaatttttaaaaattggccaaattcatcgctgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 17515410  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacac 355  Q
    ||||||||||||||||||||||||| | |||||||||||| ||||||||||| ||||||||||||||||| |||||||    
T  17515411 atcaaaatggtccctctgtccaaaatcaccgttagtggtgatgatgtgtccttttgcatgttgtgttgtcttgtacac 17515488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 178 - 358
Target Start/End: Original strand, 46112488 - 46112668
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||||||||||||| ||||||||| |||| ||||  ||||||||||| ||||||||||||||||| ||||||||||| ||||||    
T  46112488 actaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgttattgaattttgcaaaatatctatttagtccatgaattttacagacgtcc 46112587  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||||||| || ||||||||  |||||||||| ||| ||||||||||||||||||||||||| ||||||||||    
T  46112588 atcaaaatggtccctccgttcaaaagctatgttagtggtgatgacgtgtcctcttgcatgttgtgttgtcatgtacacgtg 46112668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 178 - 358
Target Start/End: Original strand, 54898438 - 54898617
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||| |    
T  54898438 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgttc 54898537  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||| ||| ||||||||||||||||||||  | ||| |||||| ||||||||||| |||||| ||||||||||    
T  54898538 atcaaaatggtctctccgtccaaaagctccgttagtgacgatgacgtgtcc-cttgcatgttgcgttgtcttgtacacgtg 54898617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 178 - 355
Target Start/End: Complemental strand, 30600061 - 30599884
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    ||||||||||||||||||||||| |||||| | ||||||| |||| | |||| |||||||||||||||||||||||||||||||||||||| | |||||     
T  30600061 actaatacctcaaattcgtccttaaatttttacaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttagagacgtcg 30599962  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacac 355  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||| ||||||||| |||||||    
T  30599961 atcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgtgtcctcttgcatgctgtgttgtcttgtacac 30599884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 178 - 358
Target Start/End: Complemental strand, 2226295 - 2226116
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||||||||||||| ||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||| |||| |    
T  2226295 actaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgttc 2226196  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    ||||||||| |||||| |||||||| ||| |||||||||| ||| |||||| |||||||| ||||||||| ||||||||||    
T  2226195 atcaaaatgttccctccgtccaaaaactctgttagtggtgatgacgtgtcc-cttgcatgctgtgttgtcttgtacacgtg 2226116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 180 - 358
Target Start/End: Original strand, 42279510 - 42279688
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccat 279  Q
    |||||||||||||||||| ||||||||||||||||| |   || |||||   ||||||||| ||||||||||||||||||||||||||||| ||||| ||    
T  42279510 taatacctcaaattcgtcattgaattttcaaaaatcagctcaattcgtctcagaattttgcaaaatatctatttagtccctgaattttacagacgtctat 42279609  T
Q  280 caaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||| | ||||||||    
T  42279610 caaaatggtccctccgtccaaaagctctgttagtggtgatgatgtgtcctcttgcatgttgtgttgtcttatacacgtg 42279688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 190 - 358
Target Start/End: Complemental strand, 35905843 - 35905676
Alignment:
Q  190 aattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtc 289  Q
    ||||| |||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  35905843 aattcatccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatggtc 35905744  T
Q  290 cctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||| |||||||||||||| |||||||| ||| |||||| |||||||| || |||||| ||||||||||    
T  35905743 cctccgtccaaaagctccggtagtggtgatgacgtgtcc-cttgcatgatgggttgtcttgtacacgtg 35905676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 178 - 358
Target Start/End: Original strand, 41977751 - 41977930
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||  ||||| ||||||| |||||||||| | ||||||||||||||||||| ||||||    
T  41977751 actaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaatttggcgaaatatcaaattagtccctgaattttacagacgtcc 41977850  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
     ||||||||||||||| ||||||||||| ||||| ||||| ||| |||||| |||||||||||||||||| ||||||||||    
T  41977851 gtcaaaatggtccctccgtccaaaagcttcgttaatggtgatgacgtgtcc-cttgcatgttgtgttgtcttgtacacgtg 41977930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 180 - 358
Target Start/End: Original strand, 2377032 - 2377210
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccat 279  Q
    |||||||||||||||||  |||||||||||||||| |  |||| |||||| |||||||||| ||| || ||||||||| |||||||||||| ||||||||    
T  2377032 taatacctcaaattcgtttttgaattttcaaaaattgaccaaattcgtccctgaattttgcaaaaaatatatttagtctctgaattttacagacgtccat 2377131  T
Q  280 caaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    ||||||||| |||| ||| ||||||||||||||||||| ||| ||||||||||||||| ||||||||| ||||||||||    
T  2377132 caaaatggttcctccgtctaaaagctccgttagtggtgatgacgtgtcctcttgcatgatgtgttgtcatgtacacgtg 2377210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 231 - 358
Target Start/End: Complemental strand, 48830896 - 48830769
Alignment:
Q  231 tgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctc 330  Q
    |||||||  ||||||||||||||||||  ||||||||||  |||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||    
T  48830896 tgaatttaacgaaatatctatttagtctttgaattttacggacgtccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgtgtcctc 48830797  T
Q  331 ttgcatgttgtgttgtcctgtacacgtg 358  Q
    ||||||||||||||||| ||||||||||    
T  48830796 ttgcatgttgtgttgtcatgtacacgtg 48830769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 178 - 358
Target Start/End: Original strand, 44794209 - 44794388
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||||||||||||| |||| |||| |||  || ||| |||||||||||||||||| | |||||||||||||||| || | ||||    
T  44794209 actaatacctcaaattcgtccttgaattttgaaaa-tcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattttgcagaagtcc 44794307  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||| | ||||||| ||||||||| ||||||| | ||| ||||||| | ||||||||| | ||||||||||||||||||    
T  44794308 atcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgtggcttcttgcatgctttgttgtcctgtacacgtg 44794388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 209 - 346
Target Start/End: Original strand, 46197752 - 46197889
Alignment:
Q  209 aaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccg 308  Q
    |||| ||||||||| |||||  |||||||||| ||||||||||||||| ||||||||||||| |||||||| ||||||||||||  ||||||||| ||||    
T  46197752 aaaactcggtcaaattcgtctctgaattttgcaaaatatctatttagttcctgaattttacagacgtccattaaaatggtcccttcgtccaaaagttccg 46197851  T
Q  309 ttagtggtggtgatgtgtcctcttgcatgttgtgttgt 346  Q
    |||||| || |||||| |||||||||||||||||||||    
T  46197852 ttagtgatgatgatgtttcctcttgcatgttgtgttgt 46197889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 178 - 358
Target Start/End: Complemental strand, 3152361 - 3152181
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    ||||||||||||||||  ||||| |||||| ||||||||| |||  || ||| |||||||||||||||||| | ||||||||||||||||||| ||||||    
T  3152361 actaatacctcaaatttatccttaaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtcc 3152262  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    ||||||   ||||||| ||||||||| ||||||| | ||| ||||||| | |||| |||| | ||||||| ||||||||||    
T  3152261 atcaaatccgtccctccgtccaaaaggtccgttaatagtgatgatgtggcttcttacatgctttgttgtcatgtacacgtg 3152181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 183 - 358
Target Start/End: Original strand, 2660218 - 2660393
Alignment:
Q  183 tacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaa 282  Q
    ||||||||||||||||||||||||| ||||||||  |||  |||||| |||||||||||||||||| | ||||||| ||||||||||| |||||||||||    
T  2660218 tacctcaaattcgtccttgaattttgaaaaatcgaccaatttcgtccctgaattttgcgaaatatcaaattagtccttgaattttacagacgtccatcaa 2660317  T
Q  283 aatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    | | ||||||| ||||||||| || |||| |   | ||||||| | ||||||||| | ||||||||| ||||||||    
T  2660318 attcgtccctccgtccaaaaggtctgttaataacgatgatgtggcttcttgcatgctttgttgtcctctacacgtg 2660393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 251 - 358
Target Start/End: Complemental strand, 44276266 - 44276159
Alignment:
Q  251 tttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctg 350  Q
    |||||||| ||||||||||| ||| |||||||||||||||||| |||||||||||| |||||||||| |||||||||||||| |||||||||| ||| ||    
T  44276266 tttagtccttgaattttacagacgcccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgtgtcctcttacatgttgtgtcgtcatg 44276167  T
Q  351 tacacgtg 358  Q
    ||||||||    
T  44276166 tacacgtg 44276159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 178 - 358
Target Start/End: Original strand, 600726 - 600890
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    ||||||||||||||||| |||||||||||| ||||||||  |||| | || | |||||||| | ||||||||||||||||                ||||    
T  600726 actaatacctcaaattcatccttgaattttaaaaaatcgaccaaatttgttcatgaattttacaaaatatctatttagtc----------------gtcc 600809  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||||||| ||| ||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||    
T  600810 atcaaaatggtccctccgtctaaaagctccgttagtggtgatgacgtgtcctcttgcatgttgtgttgtcatgtacacgtg 600890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 255 - 358
Target Start/End: Complemental strand, 7884939 - 7884837
Alignment:
Q  255 gtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtaca 354  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||| |||  ||||| |||||||||||||||||| ||||||    
T  7884939 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagttccgttagtggtgatgacatgtcc-cttgcatgttgtgttgtcttgtaca 7884841  T
Q  355 cgtg 358  Q
    ||||    
T  7884840 cgtg 7884837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 3150253 - 3150341
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| |||||||||||||  |||||| |||||||||||||||||| | |||||||||||||||    
T  3150253 actaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 3150341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 23291571 - 23291659
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||| ||||||||||||||||||| ||||||||| |||| |||||| ||||||||||||||||||||||||||| ||||||||    
T  23291571 actaataccttaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaattt 23291659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 30598338 - 30598426
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||| |||||| |||| |||||||    
T  30598338 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaatttgtccctgaattttgcgaaatagctattttgtccttgaattt 30598426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 180 - 266
Target Start/End: Complemental strand, 42282559 - 42282473
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||   |||||||||||||||||||||||||||| |||||||    
T  42282559 taatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtttctgaattttgcgaaatatctatttagtccttgaattt 42282473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 2379071 - 2378983
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| |||||||||||||  |||||| |||||||||| ||||| ||||||||||| |||||||    
T  2379071 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaatttcgtccctgaattttgcaaaatagctatttagtccttgaattt 2378983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 38193598 - 38193510
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| ||||||||| |||  |||||| |||||||||||||||||| | |||||||||||||||    
T  38193598 actaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 38193510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 41979440 - 41979352
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| ||||||||| |||  |||||| |||||||||||||||||| | |||||||||||||||    
T  41979440 actaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 41979352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 46308808 - 46308896
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| ||||||||| |||  |||||| |||||||||||||||||| | |||||||||||||||    
T  46308808 actaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46308896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 46310524 - 46310436
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||| ||||||||| |||||||||||||  |||||| |||||||||||||||||| | |||||||||||||||    
T  46310524 actaatacctcaaattcgtctttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46310436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 53094361 - 53094273
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| ||||||||| |||  |||||| |||||||||||||||||| | |||||||||||||||    
T  53094361 actaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 53094273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 53187743 - 53187831
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||| ||||||||||||| |||||||||||||  |||||| |||||||||||||||||| | |||||||||||||||    
T  53187743 actaatacctcaaatttgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 53187831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 180 - 266
Target Start/End: Complemental strand, 54412633 - 54412547
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    ||||| ||||||||||||| |||||||| |||||| ||||||| ||||||||||||||||||| ||||||||||||| |||||||||    
T  54412633 taatatctcaaattcgtccgtgaattttaaaaaattggtcaaattcgtccttgaattttgcgagatatctatttagttcctgaattt 54412547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 187 - 360
Target Start/End: Complemental strand, 31887566 - 31887393
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    |||||||||||||||||||||||   |||||||||| ||  || | |||| ||||||||||| | |||||||||||||||  || | ||| ||||||| |    
T  31887566 tcaaattcgtccttgaattttcacggatcggtcaaattcaaccatcaattatgcgaaatatcaacttagtccctgaatttgtcagatgtctatcaaaaag 31887467  T
Q  287 gtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtggc 360  Q
    ||||||| ||||||  ||||||||||   || |||| ||||  |||||||| ||||||||| ||||||||||||    
T  31887466 gtccctccgtccaagtgctccgttagccatgctgatttgtcgccttgcatgctgtgttgtcttgtacacgtggc 31887393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 187 - 312
Target Start/End: Original strand, 48633887 - 48634012
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    |||||||||||||||||||||||    ||||||||| |||||| | |||| ||||||||||| | |||||||||||||||  || ||||||||||||| |    
T  48633887 tcaaattcgtccttgaattttcacgggtcggtcaaattcgtccatcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 48633986  T
Q  287 gtccctctgtccaaaagctccgttag 312  Q
    ||||||| ||||||  ||||||||||    
T  48633987 gtccctccgtccaagtgctccgttag 48634012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 611310 - 611222
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| ||||||| | |||| |||||| |||||||| ||||||| |||||||| ||||||||||    
T  611310 actaatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccctgaatttttcgaaatagctatttagcccctgaattt 611222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 44267982 - 44268070
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||||||||||||| |||| || ||  |||||||||||||||| |||||| |||| |||||||    
T  44267982 actaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcatctctgaattttgcgaaatagctattttgtccttgaattt 44268070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 46611391 - 46611303
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| ||||||  |||||  |||||| |||||||||||||||||| | |||||||||||||||    
T  46611391 actaatacctcaaattcgtccttgaattttgaaaaatttgtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46611303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 54900162 - 54900074
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| ||||||||| |||  |||||| |||||||||||||||||| | || ||||||||||||    
T  54900162 actaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaatttgtccctgaattt 54900074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 224 - 343
Target Start/End: Complemental strand, 19987691 - 19987572
Alignment:
Q  224 tcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatg 323  Q
    |||||| |||||||||||||||||| | ||||||||| ||||||||| ||||||||||||   ||||||| ||||||||| || |||||| ||| |||||    
T  19987691 tcgtccctgaattttgcgaaatatcaaattagtccctaaattttacacacgtccatcaaatcagtccctccgtccaaaaggtctgttagtagtgatgatg 19987592  T
Q  324 tgtcctcttgcatgttgtgt 343  Q
    || | ||||||||| |||||    
T  19987591 tggcttcttgcatgctgtgt 19987572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 187 - 358
Target Start/End: Complemental strand, 40509025 - 40508854
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    |||||||||||||||||||||||    |||| |||| |||||| | |||| ||||||||||| | ||| ||| |||||||  || |||||||||||||      
T  40509025 tcaaattcgtccttgaattttcacgggtcggccaaattcgtccctcaattatgcgaaatatcaacttaatccttgaatttgtcagacgtccatcaaaaat 40508926  T
Q  287 gtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    ||||||| ||||||  | ||||||||| ||| |||| ||||  | |||||||||||||||| ||||||||||    
T  40508925 gtccctccgtccaagtgttccgttagtcgtgctgatctgtcgccctgcatgttgtgttgtcatgtacacgtg 40508854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 187 - 360
Target Start/End: Original strand, 23774162 - 23774334
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    |||||||||||||||||||||||  | |||| |||| |||||| | |||| ||||||||||| |||||||||||||||||  || |||||||||||||      
T  23774162 tcaaattcgtccttgaattttcacgagtcggccaaattcgtccctcaattatgcgaaatatcaatttagtccctgaatttgtcagacgtccatcaaaaaa 23774261  T
Q  287 gtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtggc 360  Q
    ||||||| ||| ||  |||| |||||   || |||| ||||  | |||||| ||||||||| ||||||||||||    
T  23774262 gtccctc-gtctaagtgctctgttagccatgttgatctgtcgccctgcatgatgtgttgtcttgtacacgtggc 23774334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 187 - 360
Target Start/End: Complemental strand, 23888886 - 23888713
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    |||||||||||| |||||||||| |  |||| |||  |||||| | |||| |||||||||||   |||||||||||||||  |||||||||||||||| |    
T  23888886 tcaaattcgtccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcagcttagtccctgaatttgtcaaacgtccatcaaaaag 23888787  T
Q  287 gtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtggc 360  Q
    ||||||| |||||||  |||||||||   || |||| ||||  |||||||  ||||||||| ||||| ||||||    
T  23888786 gtccctccgtccaaatcctccgttagccttgctgatctgtcgccttgcatactgtgttgtcttgtacgcgtggc 23888713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 38191896 - 38191984
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    ||||||||||||||||||||||| |||||| |||||| || |||  |||||| |||||||||||||||||| | |||||||||||||||    
T  38191896 actaatacctcaaattcgtccttaaattttgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 38191984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 178 - 258
Target Start/End: Complemental strand, 51686482 - 51686402
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtcc 258  Q
    ||||||||||||||||||||||| |||||||||||||| | |||| |||||| | ||||||||||||||| ||||||||||    
T  51686482 actaatacctcaaattcgtccttaaattttcaaaaatcagccaaattcgtccctaaattttgcgaaatatttatttagtcc 51686402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 187 - 266
Target Start/End: Complemental strand, 17517052 - 17516973
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||  ||||| |||| |||||||    
T  17517052 tcaaattcgtccttgaattttcaaaaatcggtcaaattcgttcatgaattttgcgaaatagttattttgtccttgaattt 17516973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 188 - 358
Target Start/End: Original strand, 5133007 - 5133177
Alignment:
Q  188 caaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatgg 287  Q
    |||||| |||||||||||| ||  |||||| ||||  ||||||  |||||  ||||||   ||||| |||| ||||||| |||||||||||||||||| |    
T  5133007 caaattagtccttgaatttgcacgaatcggacaaaaacgtcctccaatttatcgaaatgcatattttgtccttgaatttaacaaacgtccatcaaaatag 5133106  T
Q  288 tccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    ||| || ||||||| |||||||||||| || |||  |||| || |||||||  ||||||| ||||||||||    
T  5133107 tccttccgtccaaatgctccgttagtgctgctgagctgtcgtcatgcatgtcctgttgtcttgtacacgtg 5133177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 182 - 266
Target Start/End: Complemental strand, 2661992 - 2661908
Alignment:
Q  182 atacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||| ||||||||  |||  |||||| |||||||||||||||||| | ||||||| |||||||    
T  2661992 atacctcaaattcgtccttgaattttgaaaaatcgaccaatttcgtccgtgaattttgcgaaatatcaaattagtccatgaattt 2661908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 44795978 - 44795890
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| |||||||||  ||  |||| | |||||||||||||||||| | ||||||| |||||||    
T  44795978 actaatacctcaaattcgtccttgaattttgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccatgaattt 44795890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 46609150 - 46609238
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    ||||||| ||||||||||| |||||||||| ||||||||| |||  |||||| ||||||||| |||||||| | |||||||||||||||    
T  46609150 actaatatctcaaattcgttcttgaattttgaaaaatcggccaatttcgtccctgaattttgtgaaatatcaaattagtccctgaattt 46609238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 178 - 258
Target Start/End: Original strand, 48829357 - 48829437
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtcc 258  Q
    ||||||||||||||||||||||||||||||||||| || | |||| |  | | ||||||||||||||||||||||||||||    
T  48829357 actaatacctcaaattcgtccttgaattttcaaaattcagccaaatttattcctgaattttgcgaaatatctatttagtcc 48829437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 46114194 - 46114105
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaa-tcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||| |||||||||||  |||||||||||| ||||| |||| |||| | ||||||||||||||||||||||||||||||||  |||||||    
T  46114194 actactacctcaaatttatccttgaattttaaaaaaatcggccaaatttgtccttgaattttgcgaaatatctatttagtcattgaattt 46114105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 28626412 - 28626500
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||| | ||||||||||||| |||||||||||||  |||||| |||||| | ||||||||| |  ||||||||||||||    
T  28626412 actaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattt 28626500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 35903826 - 35903914
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||| ||||||||||||| ||||||| | |||  || ||| |||||||||| ||||||| | |||||||||||||||    
T  35903826 actaatacctcaaatttgtccttgaattttgaaaaatcagccaatttcatccctgaattttgcaaaatatcaaattagtccctgaattt 35903914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 53092624 - 53092712
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||| || |||||| |||||| || |||  |||||| |||||||||||||||||| | ||| |||||||||||    
T  53092624 actaatacctcaaattcgtctttaaattttgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaattt 53092712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 233 - 360
Target Start/End: Complemental strand, 33852738 - 33852611
Alignment:
Q  233 aattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctctt 332  Q
    |||| ||||||||||| ||||| |  ||||||||  || ||||||||||||| |||||||||||||||  ||||||||||   ||||||  ||||  | |    
T  33852738 aattatgcgaaatatcaatttaatttctgaatttatcagacgtccatcaaaaaggtccctctgtccaagtgctccgttagccatggtgacatgtcgccct 33852639  T
Q  333 gcatgttgtgttgtcctgtacacgtggc 360  Q
    ||||||||||||||| |||| |||||||    
T  33852638 gcatgttgtgttgtcttgtagacgtggc 33852611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 260 - 358
Target Start/End: Original strand, 5125884 - 5125982
Alignment:
Q  260 tgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    ||||||| |||||||||||||||||| |||| || ||||||| |||||||||||| || |||  |||| || |||||||  ||||||| ||||||||||    
T  5125884 tgaatttaacaaacgtccatcaaaatagtccttcggtccaaatgctccgttagtgctgctgagttgtcgtcctgcatgtcctgttgtcttgtacacgtg 5125982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 187 - 312
Target Start/End: Complemental strand, 2977443 - 2977318
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    ||||||||||||||||||||| |  |||||| |||| || ||| | |||| ||||||||||| ||| ||||||| |||||  || ||||||||||||| |    
T  2977443 tcaaattcgtccttgaatttttacgaatcggccaaattcatcccttaattatgcgaaatatcaattcagtccctaaatttgtcatacgtccatcaaaaag 2977344  T
Q  287 gtccctctgtccaaaagctccgttag 312  Q
    |||| || | ||||  ||||||||||    
T  2977343 gtccatccgcccaagtgctccgttag 2977318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 7883329 - 7883417
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    ||||||||||||| |||||| ||||||||| ||||||||| |||  |||||| | ||||||| |||||||| | ||||| |||||||||    
T  7883329 actaatacctcaatttcgtctttgaattttgaaaaatcggccaatttcgtccctaaattttgtgaaatatcaaattagttcctgaattt 7883417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 7884987 - 7884927
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaatttt 238  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||  ||||| ||||||||    
T  7884987 actaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaatttt 7884927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 21350693 - 21350605
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    ||||||||||||||||| ||| ||| ||||  |||||||| |||| ||||   |||||||||||||||| |||||| |||| |||||||    
T  21350693 actaatacctcaaattcatccgtgatttttttaaaatcggccaaattcgttactgaattttgcgaaatagctattttgtccttgaattt 21350605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 27897152 - 27897239
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    ||||||||||||||||| | ||| |||||| |||||| | ||||| |||||| |||||||||| || || |||||||||| ||||||||    
T  27897152 actaatacctcaaattctttcttaaattttaaaaaatggatcaaattcgtccatgaattttgc-aattagctatttagtctctgaattt 27897239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 266
Target Start/End: Complemental strand, 48635454 - 48635375
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||| ||||||| ||||||||||   |||||||||| |||||| | |||| ||||||||||| ||||| |||||||||||    
T  48635454 tcaatttcgtccctgaattttcacggatcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccctgaattt 48635375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 187 - 360
Target Start/End: Complemental strand, 18430385 - 18430212
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    ||||||||||||||||||||| |    || | |||| || ||| | |||| ||||||||||| | ||||||||||||| |  || |||||||  |||| |    
T  18430385 tcaaattcgtccttgaattttaacgggtcagccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatatgtcagacgtccaataaaaag 18430286  T
Q  287 gtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtggc 360  Q
    ||||||| ||||||  ||||||||||   ||||||  ||||  | ||||||  |||||||| ||||||||||||    
T  18430285 gtccctccgtccaagtgctccgttagccatggtgacatgtcgccctgcatgccgtgttgtcttgtacacgtggc 18430212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 187 - 300
Target Start/End: Complemental strand, 45898462 - 45898349
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    |||||||||||| |||||||||| |  |||  |||  | |||| |||||| ||||||||||| | ||||||| |||||||  || ||||| ||||||| |    
T  45898462 tcaaattcgtccctgaattttcacacgtcgaccaactttgtccctgaattatgcgaaatatcaacttagtccttgaatttgtcagacgtctatcaaaaag 45898363  T
Q  287 gtccctctgtccaa 300  Q
    ||||||| ||||||    
T  45898362 gtccctccgtccaa 45898349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 187 - 300
Target Start/End: Complemental strand, 51454364 - 51454251
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    |||||||||||||||||||||||   ||||| |||| || | | | |||| ||||||||||| | ||||||  |||||||  ||||| ||||| ||||      
T  51454364 tcaaattcgtccttgaattttcacggatcggccaaattcattcctcaattatgcgaaatatcaaattagtctttgaatttgtcaaacatccataaaaaat 51454265  T
Q  287 gtccctctgtccaa 300  Q
    ||||||||||||||    
T  51454264 gtccctctgtccaa 51454251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 255 - 312
Target Start/End: Original strand, 54092764 - 54092821
Alignment:
Q  255 gtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttag 312  Q
    |||||||||||| |||||||||||||||||| |||| || ||||||| |||| |||||    
T  54092764 gtccctgaatttaacaaacgtccatcaaaatagtccttccgtccaaatgctctgttag 54092821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 293
Target Start/End: Complemental strand, 33113294 - 33113188
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    ||||||| ||||||||||||| |    |||| |||| || ||| | |||| ||||||||||| | ||||||||| |||||  || ||||||||||||| |    
T  33113294 tcaaattagtccttgaatttttacgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctaaatttgtcagacgtccatcaaaaag 33113195  T
Q  287 gtccctc 293  Q
    |||||||    
T  33113194 gtccctc 33113188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 293
Target Start/End: Complemental strand, 41021117 - 41021011
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    |||||||||||| ||||||||||    |||| |||| | |||| | |||| |||||||| || ||||  |||||||||||  || ||||||||||||| |    
T  41021117 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccatcaaaaag 41021018  T
Q  287 gtccctc 293  Q
    |||||||    
T  41021017 gtccctc 41021011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 260 - 314
Target Start/End: Original strand, 41623735 - 41623789
Alignment:
Q  260 tgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtg 314  Q
    ||||||| |||||||||||||||||| |||| || || |||| ||||||||||||    
T  41623735 tgaatttaacaaacgtccatcaaaatagtccttccgttcaaatgctccgttagtg 41623789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 314
Target Start/End: Complemental strand, 23877038 - 23876965
Alignment:
Q  241 gaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtg 314  Q
    |||||||| | |||||| |||||||| |||||||||||||||| |  |||||| ||||||   |||||||||||    
T  23877038 gaaatatcaaattagtctctgaatttaacaaacgtccatcaaattcatccctccgtccaatccctccgttagtg 23876965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 300
Target Start/End: Complemental strand, 24383007 - 24382894
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    ||||||| ||||||||||||| |    |||| |||| || ||||| |||| || |||||||| | ||||||| || ||||  || ||||||||||||| |    
T  24383007 tcaaattggtccttgaatttttacgggtcggccaaattcatccttcaattatgagaaatatcaacttagtccatggatttgtcagacgtccatcaaaaag 24382908  T
Q  287 gtccctctgtccaa 300  Q
    ||||||| ||||||    
T  24382907 gtccctccgtccaa 24382894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 265
Target Start/End: Complemental strand, 35572610 - 35572525
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaatt 265  Q
    |||||| | ||||||||||||||||||| |||||| | | ||| | || | |||||||||  ||||| ||||||||||| ||||||    
T  35572610 taatactttaaattcgtccttgaattttaaaaaattgattaaatttgttcctgaattttgaaaaatagctatttagtccttgaatt 35572525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 142; Significance: 3e-74; HSPs: 69)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 178 - 367
Target Start/End: Original strand, 13282479 - 13282667
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||||||||||||| ||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  13282479 actaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 13282578  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtggctgcctac 367  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||| | ||||||| ||||||||||||| |||||    
T  13282579 atcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgtgtcc-cttgcatgctctgttgtcttgtacacgtggctacctac 13282667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 178 - 358
Target Start/End: Complemental strand, 8609930 - 8609751
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    ||||||||||||||||||| |||||||||| ||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  8609930 actaatacctcaaattcgttcttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtcc 8609831  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||||||| ||||||||||||||||||||||| ||| |||||| |||||||| ||||||||| ||||||||||    
T  8609830 atcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtcc-cttgcatgctgtgttgtcttgtacacgtg 8609751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 178 - 358
Target Start/End: Complemental strand, 13486242 - 13486062
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||| || |||||||||| |||||||||||| | |||||  || ||||||||||||||||||||||||||||||||||||| ||||||    
T  13486242 actaatacctcaaatttgtgcttgaatttttaaaaatcggtcagattcgtctctggattttgcgaaatatctatttagtccctgaattttacagacgtcc 13486143  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||| ||||||||||||    
T  13486142 atcaaaatggtccctctgtccaaaagctccattagtagtgatgatgtgtcctcttgcatgttgtgttgccctgtacacgtg 13486062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 180 - 358
Target Start/End: Complemental strand, 26242455 - 26242277
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccat 279  Q
    ||||||||||| ||||| |||||||||||||||||| | |||| |||||| | ||||||||||||||||||||||||| |||||||||||| ||||||||    
T  26242455 taatacctcaatttcgttcttgaattttcaaaaatcagccaaattcgtccctaaattttgcgaaatatctatttagtctctgaattttacagacgtccat 26242356  T
Q  280 caaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||    
T  26242355 caaaatggtccctccgtccaaaagctccgttagtggcgatgatgtgtcctcttgcatgttgtgttgtcttgtacacgtg 26242277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 180 - 355
Target Start/End: Complemental strand, 41825785 - 41825610
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccat 279  Q
    ||||||||||||||||||||||||||||||||||||    ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41825785 taatacctcaaattcgtccttgaattttcaaaaatcaaataaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 41825686  T
Q  280 caaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacac 355  Q
    |||||||||| ||| |||||||||||| |||||| ||| ||||||||| ||||||||| |||||||||||||||||    
T  41825685 caaaatggtcactccgtccaaaagctctgttagtagtgatgatgtgtcttcttgcatgctgtgttgtcctgtacac 41825610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 178 - 354
Target Start/End: Original strand, 22272335 - 22272513
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaa--tcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgt 275  Q
    |||||||||||||||||||| ||||||||| |||||  || |||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  22272335 actaatacctcaaattcgtctttgaattttaaaaaaaatcagtcaaattcgtccctgaattttgcgtaatatctatttagtccctgaattttacaaacgt 22272434  T
Q  276 ccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtaca 354  Q
    |||||||||| |||||||  |||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||    
T  22272435 ccatcaaaatagtccctccatccaaaagctccgttagtggtgatgatgtgttctcttgcatgttgtgttgtcatgtaca 22272513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 178 - 358
Target Start/End: Complemental strand, 7745255 - 7745075
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    ||||||| |||||||||||| ||||||||||||||||| | |||| |||||  ||||||||||||||||| ||||||||||||| |||||||| || |||    
T  7745255 actaatatctcaaattcgtctttgaattttcaaaaatcagccaaattcgtctctgaattttgcgaaatatttatttagtccctgtattttacagacatcc 7745156  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    ||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  7745155 atcaaaatggtccctccatccaaaagctccgttagtggtgatgatgtgtcctcttgcatgatgtgttgtcttgtacacgtg 7745075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 178 - 350
Target Start/End: Complemental strand, 41042727 - 41042555
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||| |||| |||||||||||||| |||||| || |||| | |||| ||||||||| ||||||||||||||||||||||||||||||  |||||    
T  41042727 actaataccttaaatccgtccttgaattttaaaaaattggccaaatttgtccctgaattttgtgaaatatctatttagtccctgaattttacaggcgtcc 41042628  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctg 350  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  41042627 atcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgtgtcctcttgcatgctgtgttgtcctg 41042555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 180 - 358
Target Start/End: Original strand, 42941777 - 42941955
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccat 279  Q
    |||||||||||||||||||||||||||| ||||||| | |||| |||||| ||||||||| ||||||| |||||||||||||||||||||| | ||||||    
T  42941777 taatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccctgaattttgagaaatatttatttagtccctgaattttacagatgtccat 42941876  T
Q  280 caaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||| ||||||| |||||||| |||||||||||| | |||||||||||||||||||||||||||||  |||||||||    
T  42941877 caaaatagtccctccgtccaaaatctccgttagtggagatgatgtgtcctcttgcatgttgtgttgtcaggtacacgtg 42941955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 178 - 358
Target Start/End: Original strand, 38547229 - 38547408
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    ||||||||||||| |||||||||||||||| ||||||||| ||||  ||||| |||||||||||||||||| | ||||||||||||||||||| ||||||    
T  38547229 actaatacctcaagttcgtccttgaattttaaaaaatcggccaaatacgtccatgaattttgcgaaatatcaaattagtccctgaattttacagacgtcc 38547328  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    ||||||||||||||||  |||||||||||||||||||||| ||| |||||| |||||||| ||||||||| ||||||||||    
T  38547329 atcaaaatggtccctccatccaaaagctccgttagtggtgatgacgtgtcc-cttgcatgctgtgttgtcttgtacacgtg 38547408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 178 - 358
Target Start/End: Complemental strand, 13108479 - 13108300
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    ||||||| |||||||||||||||||||||| |||||||||  |||  ||||| |||||||||||||||||| | ||||||||||||||||||| ||||||    
T  13108479 actaataactcaaattcgtccttgaattttaaaaaatcggctaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtcc 13108380  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||||||| ||||||||||| ||||||||||| ||| |||||| |||||||| ||||||||| ||||||||||    
T  13108379 atcaaaatggtccctccgtccaaaagcttcgttagtggtgatgacgtgtcc-cttgcatgctgtgttgtcttgtacacgtg 13108300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 178 - 358
Target Start/End: Original strand, 5036446 - 5036630
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    ||||||||||||||||||||||| |||||| ||||||| |||||| |||||| ||||||||| |||||||||||||||||| ||||||||||| |||||     
T  5036446 actaatacctcaaattcgtccttaaattttaaaaaatccgtcaaattcgtccctgaattttgtgaaatatctatttagtccttgaattttacagacgtct 5036545  T
Q  278 atcaaaatggtccctctgtcca----aaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||| ||| |||||    ||||||| ||||||| || ||||||||||||||||||||||||||||| ||||||||||    
T  5036546 atcaaaatggtctctccgtccaaattaaagctctgttagtgatgatgatgtgtcctcttgcatgttgtgttgtcttgtacacgtg 5036630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 190 - 358
Target Start/End: Complemental strand, 9673296 - 9673128
Alignment:
Q  190 aattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtc 289  Q
    ||||||||||||||| ||||  |||  |  ||| |||||| ||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  9673296 aattcgtccttgaatcttcatcaattagctaaattcgtccctgaattttgtgaaatatctatttaatccctgaattttacagacgtccatcaaaatggtc 9673197  T
Q  290 cctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||| ||| ||||||| ||||||||||| ||||||||| ||||||||||||||||||| ||||||||||    
T  9673196 cctccgtctaaaagcttcgttagtggtgatgatgtgtcttcttgcatgttgtgttgtcatgtacacgtg 9673128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 178 - 358
Target Start/End: Original strand, 27691155 - 27691335
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||||||||||||| ||||||||| |||  |||||| |||||||||||||||||| | ||||||||||||||||||| ||||||    
T  27691155 actaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtcc 27691254  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    ||||||   ||||||| ||||||||| ||||| | | ||| ||||||| | ||||||||| | ||||||||||||||||||    
T  27691255 atcaaatccgtccctccgtccaaaaggtccgtcaatagtgatgatgtggcttcttgcatgctttgttgtcctgtacacgtg 27691335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 178 - 356
Target Start/End: Complemental strand, 33708946 - 33708769
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    ||||||||||||||||| |||||||||||| ||||| |||||||  |||||| |||||||||||||||||  | ||||||||||||||||||||||||||    
T  33708946 actaatacctcaaattcatccttgaattttaaaaaa-cggtcaatttcgtccctgaattttgcgaaatattaaattagtccctgaattttacaaacgtcc 33708848  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacg 356  Q
    ||||||   ||||||| ||||||||| ||||||| | ||| ||||||| | ||||||||| | ||||||| || |||||    
T  33708847 atcaaatctgtccctccgtccaaaaggtccgttaatagtgatgatgtggcttcttgcatgctttgttgtcatgcacacg 33708769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 231 - 355
Target Start/End: Complemental strand, 40339770 - 40339646
Alignment:
Q  231 tgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctc 330  Q
    |||||| || |||||||||||||||||| ||||||||||| | |||||||||||||||||||   |||||||||||||||||| ||| |||||| ||||     
T  40339770 tgaattatgtgaaatatctatttagtccatgaattttacagatgtccatcaaaatggtcccttcatccaaaagctccgttagtagtgatgatgtatcctt 40339671  T
Q  331 ttgcatgttgtgttgtcctgtacac 355  Q
    ||||||||||||||||| |||||||    
T  40339670 ttgcatgttgtgttgtcatgtacac 40339646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 42943514 - 42943426
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| ||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||    
T  42943514 actaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 42943426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 178 - 258
Target Start/End: Complemental strand, 34681154 - 34681074
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtcc 258  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||    
T  34681154 actaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtcc 34681074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 178 - 283
Target Start/End: Original strand, 26238727 - 26238832
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||||||||||||||||||||| | |||| |||||| ||||||||||||||||||||||||||||  ||||||   ||| ||||    
T  26238727 actaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagtcctcgaatttacaaaatgtcc 26238826  T
Q  278 atcaaa 283  Q
    ||||||    
T  26238827 atcaaa 26238832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 5038149 - 5038062
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||| ||||||||| |||||||||||||| |||| |||||||||||||||||| |||||||||||||||||||    
T  5038149 actaatacctcaaattcgtc-ttgaattttaaaaaatcggtcaaattcgttcttgaattttgcgaaatagctatttagtccctgaattt 5038062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 35510907 - 35510819
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||| |||||||| | |||||||||||||||    
T  35510907 actaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccttgaattttgtgaaatatcaaattagtccctgaattt 35510819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 29237152 - 29237240
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| |||||||||||||  |||||| |||||||| ||||||||| | |||||||||||||||    
T  29237152 actaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 29237240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 33707207 - 33707295
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| |||||||||||||  |||||| |||||||| ||||||||| | |||||||||||||||    
T  33707207 actaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 33707295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 35509215 - 35509303
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||| ||||||||||||| |||||||||||||  |||||| |||||||||||||||||| | |||||||||||||||    
T  35509215 actaatacctcaaattagtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 35509303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 187 - 360
Target Start/End: Complemental strand, 37526137 - 37525964
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    |||||||||||||||||||||||    ||||||||| || | ||| |||| ||||||||||| | |||||||||||||||| || || |||||||||| |    
T  37526137 tcaaattcgtccttgaattttcacgcgtcggtcaaattcattcttcaattatgcgaaatatcaacttagtccctgaatttttcagacatccatcaaaaag 37526038  T
Q  287 gtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtggc 360  Q
    ||||||| ||||||  || | ||||||  || |||| |||| || || ||||||||||||| | ||||||||||    
T  37526037 gtccctccgtccaagtgcgctgttagtcatgttgatctgtcgtcctgtatgttgtgttgtcttatacacgtggc 37525964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 601792 - 601704
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| ||||||||| |||  |||||| |||||||| ||||||||| | |||||||||||||||    
T  601792 actaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 601704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 22273979 - 22273891
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||| ||||||||||||| ||||||||| |||| | |||  |||||||||| |||||||||||||||||||||||||    
T  22273979 actaatacctcaaatttgtccttgaattttaaaaaatcggccaaatttgtctctgaattttgcaaaatatctatttagtccctgaattt 22273891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 27692925 - 27692837
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| ||||||||| |||  |||||| |||||||||| ||||||| | |||||||||||||||    
T  27692925 actaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaattagtccctgaattt 27692837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 33762801 - 33762713
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| ||||||||| |||  |||||| |||||||| ||||||||| | |||||||||||||||    
T  33762801 actaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 33762713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 38548919 - 38548831
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| ||||||||| |||  |||||| |||||||||||||||||| | ||| |||||||||||    
T  38548919 actaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaattt 38548831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 178 - 258
Target Start/End: Original strand, 41823891 - 41823971
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtcc 258  Q
    |||||||||| ||||||||||||||||||||||||||| |  ||  |||||||||||||||||||||||||||||||||||    
T  41823891 actaataccttaaattcgtccttgaattttcaaaaatcagctaatttcgtccttgaattttgcgaaatatctatttagtcc 41823971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 180 - 266
Target Start/End: Original strand, 9671980 - 9672066
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||| |||||||||||||||||||||  ||||  ||||| |||||| ||||||||||||||||||||||||||||| ||||||    
T  9671980 taataccttaaattcgtccttgaattttcaccaatcaatcaaattcgtccatgaattttgcgaaatatctatttagtccccgaattt 9672066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 8608238 - 8608327
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttg-aattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||| ||||||||||||||||||| |||||||||||||  |||||| || |||||||||||||||| | |||||||||||||||    
T  8608238 actaataccttaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaaattttgcgaaatatcaaattagtccctgaattt 8608327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 187 - 360
Target Start/End: Complemental strand, 38882911 - 38882738
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    |||||||||||||||||||||||   |||||||||| || ||||| || | ||||| ||||| ||||| |||||||||||  || |||||||| ||||      
T  38882911 tcaaattcgtccttgaattttcacggatcggtcaaattcatccttcaactatgcgagatatcaatttaatccctgaatttgtcagacgtccataaaaaat 38882812  T
Q  287 gtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtggc 360  Q
    ||||||| ||||||  ||||||||||   || |||| |||| || |||||| ||||||||| ||||| ||||||    
T  38882811 gtccctccgtccaagtgctccgttagccatgttgatctgtcgtcctgcatgctgtgttgtcttgtactcgtggc 38882738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 13106805 - 13106893
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||| ||||||||||||||||||| ||||||||| |||  || ||| |||||||||||||||||| | |||||||||||||||    
T  13106805 actaataccttaaattcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 13106893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 29239275 - 29239187
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| ||||||||| |||  |||||| | |||||| ||||||||| | |||||||||||||||    
T  29239275 actaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattt 29239187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 33761070 - 33761158
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||| ||||||||| ||||||| | |||  |||||| |||||||||||||||||| | |||||||||||||||    
T  33761070 actaatacctcaaattcgtctttgaattttgaaaaatcagccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 33761158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 187 - 352
Target Start/End: Original strand, 31821428 - 31821593
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    |||||||||||| |||||||||| |  ||||||||  |||||| | |||| ||||||||||| | |||||||| ||||||  || ||||||||||||| |    
T  31821428 tcaaattcgtccctgaattttcacacgtcggtcaacttcgtccctcaattatgcgaaatatcaacttagtcccagaatttatcagacgtccatcaaaaag 31821527  T
Q  287 gtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgta 352  Q
    ||||||| ||||||   ||| |||||   || |||| |||| ||||||||| ||||||||| ||||    
T  31821528 gtccctccgtccaagtcctctgttagccttgctgatctgtcgtcttgcatgatgtgttgtcttgta 31821593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 13484546 - 13484634
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||| ||||||||||||| ||||||||||||||||||| |||| |||||| |||||||||||||||   ||||| |||| |||||||    
T  13484546 actaatgcctcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaattgttattttgtccttgaattt 13484634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 224 - 360
Target Start/End: Complemental strand, 33750461 - 33750325
Alignment:
Q  224 tcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatg 323  Q
    |||||| | |||| ||||||||||| | |||||||||||||||  || || | |||||||| |||||||| ||||||  |||| ||||| | || ||||     
T  33750461 tcgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacattcatcaaaaaggtccctccgtccaagtgctctgttagcgatgttgatc 33750362  T
Q  324 tgtcctcttgcatgttgtgttgtcctgtacacgtggc 360  Q
    |||| ||||||||||||||||||| ||||| ||||||    
T  33750361 tgtcgtcttgcatgttgtgttgtcttgtacgcgtggc 33750325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 178 - 258
Target Start/End: Complemental strand, 43262225 - 43262145
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtcc 258  Q
    ||||||||||||||||||||||| |||||||||||||| |  ||| ||| || | ||||||||||||||||||||||||||    
T  43262225 actaatacctcaaattcgtccttaaattttcaaaaatcagctaaattcgaccctaaattttgcgaaatatctatttagtcc 43262145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 266
Target Start/End: Complemental strand, 13284081 - 13283995
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    ||||||| |||||||||||||||||||| ||||||||| |||  | |||| |||||||||||||||||| | ||||||| |||||||    
T  13284081 taataccacaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccatgaattt 13283995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 178 - 283
Target Start/End: Complemental strand, 27407040 - 27406935
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||| | ||||||||||||| |||||| || |||  |||||| |||||| | ||||||||  |  |||||||||||||||||| ||||||    
T  27407040 actaatacctcaaaatagtccttgaattttgaaaaattggccaatttcgtccatgaattattcgaaatattaaaatagtccctgaattttacagacgtcc 27406941  T
Q  278 atcaaa 283  Q
    ||||||    
T  27406940 atcaaa 27406935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 187 - 360
Target Start/End: Complemental strand, 42897888 - 42897715
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    |||||| |||||||||||||| |    |||| |||| |||||| | |||| || |||||||| | ||||||| |||||||  || ||||||||||||| |    
T  42897888 tcaaatccgtccttgaatttttacgggtcggccaaattcgtccctcaattatgtgaaatatcaacttagtccttgaatttgtcagacgtccatcaaaaag 42897789  T
Q  287 gtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtggc 360  Q
    ||||||| ||||||  |||| |||||   || |||| |||| || |||||| ||||||||| ||||||||||||    
T  42897788 gtccctccgtccaagtgctctgttagccatgctgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggc 42897715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 311
Target Start/End: Original strand, 15305815 - 15305931
Alignment:
Q  195 gtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctct 294  Q
    ||||||||||||| |||||| ||||||  | |||| |||||| |  |||||||| | ||||||||||||||||||| ||||||||||||   |||||||     
T  15305815 gtccttgaattttgaaaaattggtcaattttgtccctgaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctcc 15305914  T
Q  295 gtccaaaagctccgtta 311  Q
    ||||||||  |||||||    
T  15305915 gtccaaaatatccgtta 15305931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 15308349 - 15308261
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||| | ||||||||||||| ||||||||| |||  |||||| |||||| | ||||||||| | |||||||||||||||    
T  15308349 actaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattt 15308261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 311
Target Start/End: Original strand, 15486184 - 15486300
Alignment:
Q  195 gtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctct 294  Q
    ||||||||||||| |||||| ||||||  | |||| |||||| |  |||||||| | ||||||||||||||||||| ||||||||||||   |||||||     
T  15486184 gtccttgaattttgaaaaattggtcaattttgtccctgaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctcc 15486283  T
Q  295 gtccaaaagctccgtta 311  Q
    ||||||||  |||||||    
T  15486284 gtccaaaatatccgtta 15486300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 15488718 - 15488630
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||| | ||||||||||||| ||||||||| |||  |||||| |||||| | ||||||||| | |||||||||||||||    
T  15488718 actaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattt 15488630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 423 - 553
Target Start/End: Original strand, 37987530 - 37987660
Alignment:
Q  423 acaacaaaacataggcagcgacgctggtccgaagcggaaacacaacctagatcgataaaaggcatctgttggtgacaaggagaaggctgtcgtcgccgaa 522  Q
    |||||| ||||  ||||||||||| |||| ||||||||||| ||||||||||||  || | ||| | |  ||||||||||||||||||  || | |||||    
T  37987530 acaacataacacgggcagcgacgccggtctgaagcggaaactcaacctagatcgtaaacacgcacccgccggtgacaaggagaaggcttccggcaccgaa 37987629  T
Q  523 gtaaatatcaactaaaccaaaaagcgacaag 553  Q
    ||||| | |||| ||||||| ||||||||||    
T  37987630 gtaaacaacaaccaaaccaacaagcgacaag 37987660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 187 - 360
Target Start/End: Complemental strand, 462484 - 462311
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    ||||||||||| ||||||||| | | ||||| |||| || ||| | |||| ||||||||||| | ||||||| |||||||  |||||||||||||||| |    
T  462484 tcaaattcgtcattgaatttttacagatcggccaaattcatccgtcaattatgcgaaatatcaacttagtccttgaatttgtcaaacgtccatcaaaaag 462385  T
Q  287 gtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtggc 360  Q
     ||||||  |||||  |||| |||||   || |||| ||||  | ||||||||||||| || | ||||||||||    
T  462384 atccctccatccaagtgctctgttagccatgctgatttgtcgccgtgcatgttgtgttatcttatacacgtggc 462311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 9519130 - 9519057
Alignment:
Q  396 cacaaatctagaggaagacgaaaccagacaacaaaacataggcagcgacgctggtccgaagcggaaacacaacc 469  Q
    ||||||||||||| |||||||||||  |||||||||||  |||||||||||||||  ||||||| |||||||||    
T  9519130 cacaaatctagagaaagacgaaacccaacaacaaaacacgggcagcgacgctggtttgaagcgggaacacaacc 9519057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 354
Target Start/End: Original strand, 9184445 - 9184560
Alignment:
Q  239 gcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgt 338  Q
    |||||||||| | |||||||||||||||  || ||||| ||| |||||||||||| ||||||| ||| | |||||| || |||| ||||  | ||||||     
T  9184445 gcgaaatatcaaattagtccctgaatttgtcagacgtcgatcgaaatggtccctccgtccaaatgcttcattagtgctgctgatctgtcgccctgcatga 9184544  T
Q  339 tgtgttgtcctgtaca 354  Q
    ||||||||| ||||||    
T  9184545 tgtgttgtcttgtaca 9184560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 178 - 236
Target Start/End: Original strand, 600761 - 600819
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaatt 236  Q
    |||||||||||||||||||||||||||||| ||||||| | |||  |||||||||||||    
T  600761 actaatacctcaaattcgtccttgaattttgaaaaatcagccaatttcgtccttgaatt 600819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 240 - 358
Target Start/End: Complemental strand, 11722870 - 11722752
Alignment:
Q  240 cgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgtt 339  Q
    |||||| ||||||| |||  ||||||| ||||||||| |||||| |  |||||| ||||| | ||||| ||| || || |||| |||| |||||||||||    
T  11722870 cgaaatgtctatttcgtctttgaatttaacaaacgtcaatcaaattcatccctccgtccagatgctccattactgatgctgatatgtcgtcttgcatgtt 11722771  T
Q  340 gtgttgtcctgtacacgtg 358  Q
    |||||||  ||||||||||    
T  11722770 gtgttgtgttgtacacgtg 11722752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 252 - 358
Target Start/End: Original strand, 37801541 - 37801647
Alignment:
Q  252 ttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgt 351  Q
    ||||||||||||||| ||||||||| |||||| |||||| || ||||||| | | ||||||||||| |||  |||| || ||||||   ||||||| |||    
T  37801541 ttagtccctgaatttaacaaacgtcaatcaaattggtccttccgtccaaatggttcgttagtggtgctgagttgtcttcctgcatggcttgttgtcttgt 37801640  T
Q  352 acacgtg 358  Q
    |||||||    
T  37801641 acacgtg 37801647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 214 - 293
Target Start/End: Complemental strand, 31201230 - 31201151
Alignment:
Q  214 tcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctc 293  Q
    |||| |||| |||||| | |||| ||||||||||| ||||| |||||||||||  || ||||||||||||| ||||||||    
T  31201230 tcggccaaattcgtccatcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctc 31201151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 358
Target Start/End: Original strand, 11788384 - 11788502
Alignment:
Q  240 cgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgtt 339  Q
    ||||||||| | || ||||  |||||| ||| |||||||||||| |  |||||| |||||| | ||| ||||||| || ||| ||||| ||||| |||||    
T  11788384 cgaaatatcaaatttgtcctcgaatttaacagacgtccatcaaattcatccctccgtccaatatctctgttagtgatgctgaggtgtcttcttgtatgtt 11788483  T
Q  340 gtgttgtcctgtacacgtg 358  Q
    |||||||  ||||||||||    
T  11788484 gtgttgttttgtacacgtg 11788502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 266
Target Start/End: Original strand, 27404213 - 27404299
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||| | ||||||||||||| ||||||||| |||  |||||| |||||| | ||||||||| |  |||||||| |||||    
T  27404213 taatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctaaattt 27404299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 293
Target Start/End: Complemental strand, 33160262 - 33160156
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    ||||||||||||||||||||||| |  |||| |||| || ||| | |||| || |||||||| | |||||| ||||||||  || ||| ||||||||| |    
T  33160262 tcaaattcgtccttgaattttcacaggtcggccaaattcatccctcaattatgtgaaatatcaacttagtctctgaatttgtcagacgcccatcaaaaag 33160163  T
Q  287 gtccctc 293  Q
    |||||||    
T  33160162 gtccctc 33160156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 252 - 358
Target Start/End: Original strand, 44526694 - 44526800
Alignment:
Q  252 ttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgt 351  Q
    ||||||||||||||| ||||||| | |||||| | |||| || || |||| |||| |||||||||| |||  |||| |||||||||   ||||||| |||    
T  44526694 ttagtccctgaatttaacaaacgccaatcaaattagtccttccgttcaaatgctctgttagtggtgctgagttgtcgtcttgcatggcttgttgtcttgt 44526793  T
Q  352 acacgtg 358  Q
    |||||||    
T  44526794 acacgtg 44526800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 187 - 288
Target Start/End: Original strand, 5075378 - 5075479
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    |||| ||||||||||||||| |||  ||| | |||| ||||||   |||||||||||||||| |||| |||| |||||||  |  |||||||||||||||    
T  5075378 tcaacttcgtccttgaatttgcaagcatcagccaaaatcgtccccaaattttgcgaaatatcaattttgtccttgaatttctctcacgtccatcaaaatg 5075477  T
Q  287 gt 288  Q
    ||    
T  5075478 gt 5075479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 41040721 - 41040809
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||| ||| ||||||||| |||||||||  ||| ||||   |||||||| | ||||| |||||| |||| |||||||    
T  41040721 actaatacctcaaatttgtctttgaatttttaaaaatcggctaaattcgtttctgaattttccaaaatagctattttgtccttgaattt 41040809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 314
Target Start/End: Complemental strand, 15145808 - 15145749
Alignment:
Q  255 gtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtg 314  Q
    |||||||||||| ||||||||| |||||||| |||| || ||||||| |||| |||||||    
T  15145808 gtccctgaatttaacaaacgtcgatcaaaatagtccttccgtccaaatgctctgttagtg 15145749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 266
Target Start/End: Complemental strand, 44620750 - 44620671
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||| ||||||| ||||||| |||  |||||||||| ||||||   |||||||| ||||||| |||| ||||||||||||    
T  44620750 tcaacttcgtccctgaatttgcaagcatcggtcaaaatcgtccccaaattttgcaaaatatcaatttcgtccctgaattt 44620671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 214 - 312
Target Start/End: Original strand, 8654537 - 8654634
Alignment:
Q  214 tcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttag 312  Q
    ||||||||| |||| | | |||| ||||||||||| ||||| | | |||||||  || ||||||||||||| |||||||| ||||||  ||||||||||    
T  8654537 tcggtcaaattcgttcctcaattatgcgaaatatc-atttaattcttgaatttatcagacgtccatcaaaagggtccctccgtccaagtgctccgttag 8654634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 399 - 469
Target Start/End: Original strand, 34866632 - 34866702
Alignment:
Q  399 aaatctagaggaagacgaaaccagacaacaaaacataggcagcgacgctggtccgaagcggaaacacaacc 469  Q
    |||| ||||||||||||||| |  |||||||||||  ||||||||||| |||  ||||||||| |||||||    
T  34866632 aaatttagaggaagacgaaatccaacaacaaaacacgggcagcgacgccggtttgaagcggaaccacaacc 34866702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 465
Target Start/End: Complemental strand, 10551829 - 10551748
Alignment:
Q  384 cagcaacaaaatcacaaatctagaggaagacgaaaccagacaacaaaacataggcagcgacgctggtccgaagcggaaacac 465  Q
    |||||||| || || | ||||||||||||||||||||  |||||||| ||  ||||||||||| | |  |||||||||||||    
T  10551829 cagcaacacaaacatagatctagaggaagacgaaacccaacaacaaagcacgggcagcgacgccgatttgaagcggaaacac 10551748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 196 - 260
Target Start/End: Original strand, 10267857 - 10267921
Alignment:
Q  196 tccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccct 260  Q
    |||||||||||| |  ||||||||||| |||||||| |||| ||||||||||  ||||| |||||    
T  10267857 tccttgaatttttacgaatcggtcaaaatcgtcctttaattatgcgaaatattaatttaatccct 10267921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 399 - 475
Target Start/End: Original strand, 34389588 - 34389664
Alignment:
Q  399 aaatctagaggaagacgaaaccagacaacaaaacataggcagcgacgctggtccgaagcggaaacacaacctagatc 475  Q
    |||||||||||| |||||||    |||||||||||  ||||||||||| |||  ||||||||| ||||||| |||||    
T  34389588 aaatctagaggaggacgaaattccacaacaaaacacgggcagcgacgccggtttgaagcggaagcacaacccagatc 34389664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 141; Significance: 1e-73; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 178 - 358
Target Start/End: Complemental strand, 36057736 - 36057556
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||| |||||||||||||| ||||||    
T  36057736 actaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagaccctgaattttacagacgtcc 36057637  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||||||| ||||||||||||||||| ||||| ||||||||| ||||||||||||||||||| ||||||||||    
T  36057636 atcaaaatggtccctccgtccaaaagctccgttaatggtgatgatgtgtcatcttgcatgttgtgttgtcatgtacacgtg 36057556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 178 - 358
Target Start/End: Original strand, 17574319 - 17574498
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||||||||||||| ||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  17574319 actaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtcc 17574418  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||||||| ||||||||||||||||||||||| ||| |||||| |||||||| ||||||||| ||||||||||    
T  17574419 atcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtcc-cttgcatgctgtgttgtcttgtacacgtg 17574498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 178 - 358
Target Start/End: Original strand, 8539676 - 8539856
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||||||||||||| |||||||  ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  8539676 actaatacctcaaattcgtccttgaattttgaaaaatcaatcaaattcgttcttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 8539775  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||| ||| |||  ||||||||||||||||||| || || |||||||||||||||||||||||||| ||||||||||    
T  8539776 atcaaaatagtcgctccatccaaaagctccgttagtgttgatggtgtgtcctcttgcatgttgtgttgtcatgtacacgtg 8539856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 178 - 358
Target Start/End: Original strand, 34327636 - 34327816
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    ||||||||||||||||||||||||||||||| ||||| || |||| |||||  |||||||||||||||||||||||||||||||||||||||| ||||||    
T  34327636 actaatacctcaaattcgtccttgaattttctaaaattggccaaattcgtcgctgaattttgcgaaatatctatttagtccctgaattttacagacgtcc 34327735  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||| ||| |||||||||||| |||||||||| |||||||||||||||||||||| |||||| ||||||||||    
T  34327736 atcaaaatggtctctccgtccaaaagctctgttagtggtgatgatgtgtcctcttgcatgttgcgttgtcatgtacacgtg 34327816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 178 - 358
Target Start/End: Original strand, 2179788 - 2179968
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||| ||||||||||||| |||||||||||||| |||||| ||||||||| |||||||||||||| ||||||||||||||| || |||    
T  2179788 actaatacctcaaatttgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgtgaaatatctatttaatccctgaattttacagacatcc 2179887  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||||||| ||||||||||||| ||||||||| |||  |||||||||||||||||||||||| ||||||||||    
T  2179888 atcaaaatggtccctccgtccaaaagctccattagtggtgatgacatgtcctcttgcatgttgtgttgtcatgtacacgtg 2179968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 182 - 358
Target Start/End: Complemental strand, 30468399 - 30468223
Alignment:
Q  182 atacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatca 281  Q
    ||||||||| |||||||||||||||| |||||| ||||||| |||||  | |||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  30468399 atacctcaatttcgtccttgaattttaaaaaattggtcaaattcgtctctcaattttgcgaaatatctatttagtccttgaattttacagacgtccatca 30468300  T
Q  282 aaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||    
T  30468299 aaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtcctcttgcatgttgtgttgtcatgtacacgtg 30468223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 178 - 358
Target Start/End: Original strand, 7267844 - 7268023
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||||||||||||| ||||||||  |||| |||||  |||||||||||||||||||||||||||||||||||||||| ||||||    
T  7267844 actaatacctcaaattcgtccttgaattttaaaaaatcgtccaaattcgtcactgaattttgcgaaatatctatttagtccctgaattttacagacgtcc 7267943  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    ||||||||| |||||| ||||||||||||||||||||||| ||| |||||| || ||||| ||||||||| ||||||||||    
T  7267944 atcaaaatgatccctccgtccaaaagctccgttagtggtgatgacgtgtcc-ctcgcatgatgtgttgtcttgtacacgtg 7268023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 29 - 169
Target Start/End: Original strand, 38111096 - 38111236
Alignment:
Q  29 ttgatattttgaatttgactttaaatattaaaaaaggtctatcgtttattttattaccacggaaattaatcttcgaagttatgcgcaaatgataaacata 128  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||  |||||| ||||||||||||||||||    
T  38111096 ttgatattttgaatttgactttaaatattaaaaaaggtctgtcgtctattttattaccacggaaattaatcttgaaagttacgcgcaaatgataaacata 38111195  T
Q  129 tgaaaatttaatgctttagtcatttttgagaaaatgctacc 169  Q
     |||||||||||||||||||||||||||| |||||||||||    
T  38111196 ggaaaatttaatgctttagtcatttttgaaaaaatgctacc 38111236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 180 - 358
Target Start/End: Complemental strand, 18625129 - 18624951
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccat 279  Q
    ||||||||||||||||||||||||||||||   ||| |  ||| |||||| ||||||||| ||||||||||||||||||||||||||||||  |||||||    
T  18625129 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 18625030  T
Q  280 caaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    ||||||||||| || ||||||||||||||||||| ||| ||||||||| ||||||||||||||||||| | ||||||||    
T  18625029 caaaatggtccttccgtccaaaagctccgttagtagtgatgatgtgtcttcttgcatgttgtgttgtcttatacacgtg 18624951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 178 - 358
Target Start/End: Complemental strand, 24541335 - 24541154
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||| ||||||||| ||||||||| |||  |||||| |||||||||||||||||| | ||||||||||||||||||| ||||||    
T  24541335 actaatacctcaaattcgtcattgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtcc 24541236  T
Q  278 atcaaaatggtc-cctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||| |  || |||| ||||||||| ||  ||| | ||| ||||||| | ||||||||| | ||||||||||||||||||    
T  24541235 atcaaattcatctcctccgtccaaaaggtctattaatagtgatgatgtggcttcttgcatgctttgttgtcctgtacacgtg 24541154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 178 - 358
Target Start/End: Complemental strand, 2854449 - 2854271
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||||||||||||| |||||||||||||  |||||| |||||||| ||||| ||| | ||||||||||||||||||| ||||||    
T  2854449 actaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaa-atcaaattagtccctgaattttacagacgtcc 2854351  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    | |||| | ||||||| ||||||||| ||| ||| | ||| ||||||| | ||||||||| | ||||||| ||||||||||    
T  2854350 aacaaattcgtccctccgtccaaaaggtccattaatagtgatgatgtggcttcttgcatgct-tgttgtcttgtacacgtg 2854271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 30463901 - 30463989
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  30463901 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 30463989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 12738824 - 12738736
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| ||||||||| |||| |||| | ||||||||||||||||||||||||||||||||||||    
T  12738824 actaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaattt 12738736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 12801647 - 12801559
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| ||||||||| |||| |||| | ||||||||||||||||||||||||||||||||||||    
T  12801647 actaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaattt 12801559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 8541359 - 8541271
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||| ||||||||| ||||||||| |||| |||||| |||||||||||||||||||||||||||| |||||||    
T  8541359 actaatacctcaaattcgtcattgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccttgaattt 8541271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 34328915 - 34328827
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||| |||||| |||| |||||||    
T  34328915 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccatgaattttgcaaaatagctattttgtccttgaattt 34328827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 180 - 311
Target Start/End: Original strand, 40780553 - 40780684
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccat 279  Q
    |||||||||||| | ||||||||||||| ||||||||| |||  |||||| |||||||| ||||||||| | |||||||||||||||| |||||||||||    
T  40780553 taatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcaaacgtccat 40780652  T
Q  280 caaaatggtccctctgtccaaaagctccgtta 311  Q
    ||||   ||||||| ||||||||  |||||||    
T  40780653 caaatcagtccctccgtccaaaatgtccgtta 40780684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 178 - 327
Target Start/End: Complemental strand, 29621904 - 29621755
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||| | ||| ||||||||| ||||||||| |||  |||||| |||||||| ||||||||| | |||||||||||||||| || ||||||    
T  29621904 actaatacctcaaaatagtcattgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtcc 29621805  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtc 327  Q
    ||||||   ||||||| ||||||||  ||||||| | ||| |||||||||    
T  29621804 atcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 29621755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 2852887 - 2852975
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| |||||||||||||  |||||| |||||||||||||||||| | ||||| |||||||||    
T  2852887 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaattt 2852975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 21843080 - 21842992
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| |||||||||||||  | |||| |||||||||||||||||| | |||||||||||||||    
T  21843080 actaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccatgaattttgcgaaatatcaaattagtccctgaattt 21842992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 28813855 - 28813765
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaa--tcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||  |||||  | || |||| |||||||||||||||||||||||||||||||||||||||||||    
T  28813855 actaatacctcaaattcgtccttgaatttaaaaaaaaattggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattt 28813765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 180 - 266
Target Start/End: Complemental strand, 28822176 - 28822090
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||| |||||| ||||||| |||||| |||||||||||||||  |||||| |||| |||||||    
T  28822176 taatacctcaaattcgtccttgaatttttaaaaataggtcaaattcgtccctgaattttgcgaaattgctattttgtccttgaattt 28822090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 187 - 360
Target Start/End: Complemental strand, 18728716 - 18728543
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    |||||||||||| ||||||||||    |||| |||  |||||| | |||| ||||||||||| | |||||||||||||||  || ||||||||||||| |    
T  18728716 tcaaattcgtccctgaattttcacttgtcggccaacttcgtcccttaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 18728617  T
Q  287 gtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtggc 360  Q
    ||||||| ||||||  |||| |||||   || |||| ||||  |||||||| ||||||||| ||||||||||||    
T  18728616 gtccctccgtccaagtgctctgttagccttgctgatctgtcaccttgcatgctgtgttgtcttgtacacgtggc 18728543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 178 - 283
Target Start/End: Complemental strand, 42473730 - 42473625
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||| | ||||||||||||| ||||||||| |||  |||||| |||||| | ||||||||| |  |||||||||||||||||| ||||||    
T  42473730 actaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattttacagacgtcc 42473631  T
Q  278 atcaaa 283  Q
    ||||||    
T  42473630 atcaaa 42473625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 7269534 - 7269446
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||| ||||||||| |||||||||  ||  |||||| |||||||||||||||||| | |||||||||||||||    
T  7269534 actaatacctcaaattcgtctttgaattttaaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 7269446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 32134232 - 32134320
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||| ||| |||||||||||||||||   |||| ||||| ||||||||||  |||||||||||||||||||||||||    
T  32134232 actaatacctcaaatttgtcattgaattttcaaaaatcaaccaaattcgtctttgaattttgtaaaatatctatttagtccctgaattt 32134320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 180 - 264
Target Start/End: Original strand, 41493847 - 41493931
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaat 264  Q
    ||||||||||| |||||||||||||||||||||||| | |||| |||||||  ||||||| |||||||||||||||||| |||||    
T  41493847 taatacctcaacttcgtccttgaattttcaaaaatcagccaaattcgtcctcaaattttgtgaaatatctatttagtccatgaat 41493931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 281 - 358
Target Start/End: Original strand, 28819391 - 28819468
Alignment:
Q  281 aaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    ||||||||||||| |||||||||||||||||||| || |||||||||||||| |||| |||| |||| ||||||||||    
T  28819391 aaaatggtccctccgtccaaaagctccgttagtgatgatgatgtgtcctcttacatgatgtgatgtcatgtacacgtg 28819468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 187 - 268
Target Start/End: Complemental strand, 43492212 - 43492131
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaatttta 268  Q
    |||||||||| ||| |||||||||||||| | |||  || ||| ||||||||||||||||||||||||||||||||||||||    
T  43492212 tcaaattcgtacttaaattttcaaaaatcagccaagttcatccctgaattttgcgaaatatctatttagtccctgaatttta 43492131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 40782299 - 40782211
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||| | ||||||||||||| ||||||||| |||  |||||| |||||||| ||||||||| | |||||||||||||||    
T  40782299 actaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 40782211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 187 - 357
Target Start/End: Complemental strand, 38178207 - 38178037
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    |||||||||||||| ||||||||    ||||||||| || ||| | |||| ||||||||||| |||||||  ||||||||  || ||||||||||||| |    
T  38178207 tcaaattcgtccttaaattttcacgggtcggtcaaattcatccctcaattatgcgaaatatcaatttagtatctgaatttgtcagacgtccatcaaaaag 38178108  T
Q  287 gtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgt 357  Q
    ||||||  |||||   ||||||||||   || |||| |||| || |||||| ||||||||| |||||||||    
T  38178107 gtcccttcgtccatgtgctccgttagccatgctgatatgtcgtcctgcatgctgtgttgtcttgtacacgt 38178037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 187 - 357
Target Start/End: Complemental strand, 38205431 - 38205261
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    |||||||||||||| ||||||||    ||||||||| || ||| | |||| ||||||||||| |||||||  ||||||||  || ||||||||||||| |    
T  38205431 tcaaattcgtccttaaattttcacgggtcggtcaaattcatccctcaattatgcgaaatatcaatttagtatctgaatttgtcagacgtccatcaaaaag 38205332  T
Q  287 gtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgt 357  Q
    ||||||  |||||   ||||||||||   || |||| |||| || |||||| ||||||||| |||||||||    
T  38205331 gtcccttcgtccatgtgctccgttagccatgctgatatgtcgtcctgcatgctgtgttgtcttgtacacgt 38205261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 187 - 360
Target Start/End: Original strand, 32087524 - 32087697
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    |||||||||||| ||||||||||    ||| ||||  |||||| | |||| ||||||||||| | ||||||||| |||||| || ||||||||||||| |    
T  32087524 tcaaattcgtccctgaattttcacgcgtcgatcaacttcgtcccttaattatgcgaaatatcaacttagtcccttaatttttcagacgtccatcaaaaag 32087623  T
Q  287 gtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtggc 360  Q
    ||||||| ||||||  |||| |||||   || |||| | ||  |||||||| ||||||||| ||||| ||||||    
T  32087624 gtccctccgtccaagtgctctgttagccttgctgatctatcgccttgcatgctgtgttgtcttgtacgcgtggc 32087697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 29620139 - 29620227
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||| | ||||||||||||| ||||||||| |||  |||||| |||||||| ||||||||| | |||||| ||||||||    
T  29620139 actaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtctctgaattt 29620227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 187 - 306
Target Start/End: Complemental strand, 15459303 - 15459184
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    |||||||||||||||||||| |||  ||||| |||| ||||||   |||||  ||||||  |||||| || ||||||||| ||| |||||||||||||||    
T  15459303 tcaaattcgtccttgaatttgcaaggatcggacaaaatcgtcccccaatttatcgaaatggctattttgttcctgaatttaacagacgtccatcaaaatg 15459204  T
Q  287 gtccctctgtccaaaagctc 306  Q
    ||||||  ||||||| ||||    
T  15459203 gtcccttcgtccaaatgctc 15459184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 436 - 553
Target Start/End: Complemental strand, 697755 - 697638
Alignment:
Q  436 ggcagcgacgctggtccgaagcggaaacacaacctagatcgataaaaggcatctgttggtgacaaggagaaggctgtcgtcgccgaagtaaatatcaact 535  Q
    ||||||||||| |||| ||||||||||| ||||||||||||  || |||||  ||   |||||||||||||||||  || | |||||||||| | ||||     
T  697755 ggcagcgacgccggtctgaagcggaaactcaacctagatcgtaaacaggcacatgccagtgacaaggagaaggcttccggcaccgaagtaaacaacaacc 697656  T
Q  536 aaaccaaaaagcgacaag 553  Q
    |||| |||||||||||||    
T  697655 aaacaaaaaagcgacaag 697638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 252 - 360
Target Start/End: Original strand, 38597020 - 38597128
Alignment:
Q  252 ttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgt 351  Q
    ||||||||| |||||  || ||||||||||||| |||||||||||||||  | ||||||||  ||| |||| ||||  | |||||| ||||||||| |||    
T  38597020 ttagtcccttaatttgtcagacgtccatcaaaaaggtccctctgtccaagtgttccgttagccgtgctgatctgtcgccctgcatgctgtgttgtcttgt 38597119  T
Q  352 acacgtggc 360  Q
    |||||||||    
T  38597120 acacgtggc 38597128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 266
Target Start/End: Complemental strand, 17578022 - 17577935
Alignment:
Q  179 ctaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    ||||||||||||||||||||||||||||| ||||||||| | |  || ||| |||||||||| ||||||| | ||||| | |||||||    
T  17578022 ctaatacctcaaattcgtccttgaattttgaaaaatcggcccatttcttccctgaattttgcaaaatatcaaattagttcatgaattt 17577935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 187 - 360
Target Start/End: Original strand, 35395343 - 35395514
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    |||||||| ||| |||||||||| |  |||| |||  |||||| | |||| ||||||||||| ||||||| |||||||||   | ||||||||||||| |    
T  35395343 tcaaattcatccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcaatttagttcctgaatttgttagacgtccatcaaaaag 35395442  T
Q  287 gtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtggc 360  Q
    ||||||| ||||||  |||| |||||   || |||| ||||  ||||||||  |||||||| ||||| ||||||    
T  35395443 gtccctccgtccaagtgctctgttagccatgctgatatgtcgccttgcatg--gtgttgtcttgtacgcgtggc 35395514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 312
Target Start/End: Complemental strand, 35292456 - 35292371
Alignment:
Q  227 tccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttag 312  Q
    ||||| |||| ||||||||||| | |||||||||||||||  || |||||||| |||| ||| |||| ||||||| ||||||||||    
T  35292456 tccttcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccataaaaaaggttcctccgtccaaatgctccgttag 35292371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 187 - 300
Target Start/End: Original strand, 38596878 - 38596991
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    ||||||||||||||||||||| |    |||| |||| |||||| | |||| ||||||||||| | |||||||||||||||   | ||||||||||||| |    
T  38596878 tcaaattcgtccttgaatttttatgggtcggccaaattcgtccctcaattatgcgaaatatcaacttagtccctgaatttgttagacgtccatcaaaaag 38596977  T
Q  287 gtccctctgtccaa 300  Q
    |||  |||||||||    
T  38596978 gtctttctgtccaa 38596991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 187 - 300
Target Start/End: Complemental strand, 43318174 - 43318061
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    ||||||||||||||||||||| |    |||| |||| || ||| | |||| ||||||||||| | |||||||||||||||  || |||||||| |||| |    
T  43318174 tcaaattcgtccttgaatttttatgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccataaaaaag 43318075  T
Q  287 gtccctctgtccaa 300  Q
    ||||||| ||||||    
T  43318074 gtccctccgtccaa 43318061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 302
Target Start/End: Original strand, 27349166 - 27349281
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    |||| |||||||||||| || |||| |||   |||| ||| |||  |||||||||||||||| |||| |||| |||||||  |  ||||| |||||||||    
T  27349166 tcaacttcgtccttgaagttgcaaacatcaaccaaaatcgacctcaaattttgcgaaatatcgattttgtccttgaatttctctcacgtctatcaaaatg 27349265  T
Q  287 gtccctctgtccaaaa 302  Q
    ||||||| ||||||||    
T  27349266 gtccctccgtccaaaa 27349281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 178 - 248
Target Start/End: Original strand, 42471549 - 42471619
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatc 248  Q
    |||||||||||||| | ||||||||||||| ||||||||| |||  |||||| |||||| | |||||||||    
T  42471549 actaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatc 42471619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 266
Target Start/End: Original strand, 32835886 - 32835965
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||| ||||||| ||||||||||    ||||||||| |||||| | |||| ||||||||||| ||||| |||||||||||    
T  32835886 tcaacttcgtccctgaattttcacgggtcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccctgaattt 32835965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 407 - 509
Target Start/End: Original strand, 22687217 - 22687319
Alignment:
Q  407 aggaagacgaaaccagacaacaaaacataggcagcgacgctggtccgaagcggaaacacaacctagatcgataaaaggcatctgttggtgacaaggagaa 506  Q
    ||||||| ||||||  |||||||||||   |||||||| |  ||| |||||||||||||||||| |||||  || ||||||| |   |||||||||||||    
T  22687217 aggaagatgaaacctaacaacaaaacacgagcagcgacacaagtctgaagcggaaacacaacctggatcgtaaacaggcatccgccagtgacaaggagaa 22687316  T
Q  507 ggc 509  Q
    |||    
T  22687317 ggc 22687319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 353
Target Start/End: Original strand, 33256410 - 33256576
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    |||||||||||| |||||||| | |  |||| |||  || ||||| |||| ||||||||||| | ||| ||  |||||||  || |||||||||||||      
T  33256410 tcaaattcgtccctgaatttttacacgtcggccaacttcatccttcaattatgcgaaatatcaacttaatctttgaatttgtcagacgtccatcaaaaaa 33256509  T
Q  287 gtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtac 353  Q
    ||||||| ||||||   |||||||||   || |||| ||||  |||||||| ||||||||| |||||    
T  33256510 gtccctccgtccaagtcctccgttagccttgctgatctgtcaccttgcatgctgtgttgtcttgtac 33256576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 28819349 - 28819389
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggt 218  Q
    |||||||| |||||||| |||||||||||| ||||||||||    
T  28819349 actaatacatcaaattcctccttgaatttttaaaaatcggt 28819389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 141; Significance: 1e-73; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 178 - 358
Target Start/End: Original strand, 2869580 - 2869760
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| || ||||||||| ||||||    
T  2869580 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtctctaaattttacagacgtcc 2869679  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  2869680 atcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgtgtcatcttgcatgatgtgttgtcctgtacacgtg 2869760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 178 - 358
Target Start/End: Complemental strand, 6818801 - 6818621
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||| || |||| || ||||||||||||||||||||||||||||| ||||||    
T  6818801 actaatacctcaaattcgtccttgaattttaaaaaatcggccaaactcgtccctggatttagcaaaatatctatttagtccctgaattttacagacgtcc 6818702  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||||||| ||||||||||||||||||||||| |||  |||||||||||||||||||||||| ||||||||||    
T  6818701 atcaaaatggtccctccgtccaaaagctccgttagtggtgatgacatgtcctcttgcatgttgtgttgtcatgtacacgtg 6818621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 178 - 358
Target Start/End: Complemental strand, 25278491 - 25278311
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||| ||||||||||| ||||||||||| ||||||    
T  25278491 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtccttgaattttacatacgtcc 25278392  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||| |||| |||| ||||||||||    
T  25278391 atcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtcctcttgcatgatgtgctgtcatgtacacgtg 25278311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 178 - 358
Target Start/End: Original strand, 37344343 - 37344523
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||| ||||||||||  ||||||||||| ||||||    
T  37344343 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtctttgaattttacatacgtcc 37344442  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||| ||||||||| ||||||||||    
T  37344443 atcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtcctcttgcatgatgtgttgtcatgtacacgtg 37344523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 178 - 358
Target Start/End: Original strand, 27087284 - 27087463
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  27087284 actaatacctcaaattcgtccttaaattttaaaaaatcggtcaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 27087383  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||| || || ||||||||||||||||||||||| |||||||||| |||||||| ||||||||| ||||||||||    
T  27087384 atcaaaatggcccatccgtccaaaagctccgttagtggtgatgatgtgtcc-cttgcatgctgtgttgtcttgtacacgtg 27087463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 178 - 358
Target Start/End: Complemental strand, 31238618 - 31238438
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||| ||||||||||||| ||||||||| |||| | |||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  31238618 actaatacctcaaatttgtccttgaattttaaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtcc 31238519  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    ||||||||||||| |||||||||||||||||||||||||| ||| |||||||||| |||| ||||||||| ||||||||||    
T  31238518 atcaaaatggtccatctgtccaaaagctccgttagtggtgatgacgtgtcctcttccatgctgtgttgtcatgtacacgtg 31238438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 178 - 358
Target Start/End: Complemental strand, 4856089 - 4855910
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||  ||||| |||||||||||||||||| | ||||||||||||||||||| ||||||    
T  4856089 actaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtcc 4855990  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||||||| ||||||||||||||||| ||||| ||| |||||| |||||||||||||||||| ||||||||||    
T  4855989 atcaaaatggtccctccgtccaaaagctccgttaatggtgatgacgtgtcc-cttgcatgttgtgttgtcttgtacacgtg 4855910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 178 - 358
Target Start/End: Complemental strand, 34778261 - 34778082
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||  ||||| |||||||||||||||||| | ||||||||||||||||||| | ||||    
T  34778261 actaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagatgtcc 34778162  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||||||| ||||||||||||||||||||||| ||| |||||| ||||||| |||||||||| ||||||||||    
T  34778161 atcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtcc-cttgcatattgtgttgtcttgtacacgtg 34778082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 178 - 358
Target Start/End: Complemental strand, 50556220 - 50556040
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    ||||||| |||||||||||| ||||||||| ||||||| |||||| |||||  |||||||||||||||||||||||||||||| ||||||||| |||||     
T  50556220 actaatatctcaaattcgtctttgaattttaaaaaatcagtcaaattcgtctctgaattttgcgaaatatctatttagtccctaaattttacagacgtct 50556121  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||||||| ||||||||||||||||||||||| ||  ||||| ||||||||| ||||||||| ||||||||||    
T  50556120 atcaaaatggtccctccgtccaaaagctccgttagtggtgatggcgtgtcatcttgcatgctgtgttgtcatgtacacgtg 50556040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 178 - 358
Target Start/End: Complemental strand, 3013599 - 3013413
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtc- 276  Q
    |||||||||||||||||||||||||||||| ||| ||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||     
T  3013599 actaatacctcaaattcgtccttgaattttaaaacatcagtcaaattcgtccatgaattttgcgaaatatctatttagtccctgaattttacagacgtcc 3013500  T
Q  277 -----catcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
         ||||||||| ||||||| ||||||||||||||||||||||| |||||| ||||||||||||  |||||||| ||||||||||    
T  3013499 atggacatcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgtatcctcttgcatgccgtgttgtcatgtacacgtg 3013413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 182 - 337
Target Start/End: Complemental strand, 51896271 - 51896116
Alignment:
Q  182 atacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatca 281  Q
    ||||||||||| ||||||| |||||| ||||||| |||||| | |||| |||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  51896271 atacctcaaatccgtccttaaattttaaaaaatcagtcaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacagatgtccatca 51896172  T
Q  282 aaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatg 337  Q
    |||| ||||||| |||||||||||| |||||||||| |||||||||||||||||||    
T  51896171 aaatagtccctccgtccaaaagctctgttagtggtgatgatgtgtcctcttgcatg 51896116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 180 - 358
Target Start/End: Complemental strand, 33602765 - 33602587
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccat 279  Q
    |||||||||||||||||||||||||||| |||||||||||||  |||||| ||||||||| |||||||| | ||||||||||||||||||| |||||| |    
T  33602765 taatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgtgaaatatcaaattagtccctgaattttacagacgtccgt 33602666  T
Q  280 caaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||| | ||||||| ||||||||| |||||||||  || ||||||| | ||||||||||||||||||| ||||||||||    
T  33602665 caaattagtccctccgtccaaaaggtccgttagtaatgatgatgtggcttcttgcatgttgtgttgtcttgtacacgtg 33602587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 178 - 358
Target Start/End: Complemental strand, 46583679 - 46583499
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||||||||||||| |||||||||||||  | |||| |||||||||||||||||| | ||||||||||||||||||| ||||||    
T  46583679 actaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtcc 46583580  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||| | ||||||| ||||||||| ||||||| ||||| ||||||| | ||||||||| | | ||||| ||||||||||    
T  46583579 atcaaatttgtccctccgtccaaaaggtccgttaatggtgatgatgtggcttcttgcatgctttcttgtcatgtacacgtg 46583499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 231 - 358
Target Start/End: Original strand, 15104495 - 15104622
Alignment:
Q  231 tgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctc 330  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||| ||||||||| ||||||||| ||    
T  15104495 tgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccttccgtccaaaagctccattagtggtgatgatgtgtcttc 15104594  T
Q  331 ttgcatgttgtgttgtcctgtacacgtg 358  Q
    ||||||| ||||||||| ||||||||||    
T  15104595 ttgcatgctgtgttgtcttgtacacgtg 15104622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 180 - 355
Target Start/End: Complemental strand, 52643736 - 52643566
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccat 279  Q
    ||||||||||||||||||||| |||||| ||||||| || ||| |||||| ||||||||||||||||| |||||||||||||||||||| |||||||       
T  52643736 taatacctcaaattcgtccttaaatttttaaaaatcagttaaattcgtccctgaattttgcgaaatatttatttagtccctgaattttataaacgtc--- 52643640  T
Q  280 caaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacac 355  Q
      | |||||| ||| ||||||||||||||||||||||| |||||||| ||||||| | ||||||||||||||||||    
T  52643639 --agatggtctctccgtccaaaagctccgttagtggtgatgatgtgttctcttgcgtattgtgttgtcctgtacac 52643566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 178 - 279
Target Start/End: Complemental strand, 25279076 - 25278975
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||||||||||||||||||||| | |||| |||| | | |||||||||||||||||||||||||||||||||||||| ||||||    
T  25279076 actaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgttcctaaattttgcgaaatatctatttagtccctgaattttacagacgtcc 25278977  T
Q  278 at 279  Q
    ||    
T  25278976 at 25278975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 31236820 - 31236908
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| |||||||||||||| | |||| |||||||||||||||||||||||||| |||||||||    
T  31236820 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaatttgtccctgaattttgcgaaatatctatttagttcctgaattt 31236908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 178 - 311
Target Start/End: Complemental strand, 47013205 - 47013072
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||| | ||||||||||||| ||||||||| |||  |||||| |||||||| ||||||||| | |||||||||||||||| |||||||||    
T  47013205 actaatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcaaacgtcc 47013106  T
Q  278 atcaaaatggtccctctgtccaaaagctccgtta 311  Q
    ||||||   ||||||| ||||||||  |||||||    
T  47013105 atcaaatcagtccctccgtccaaaatgtccgtta 47013072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 26223588 - 26223676
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| |||||||||||||  |||||| |||||||||||||||||| | |||||||||||||||    
T  26223588 actaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 26223676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 178 - 327
Target Start/End: Complemental strand, 9121791 - 9121642
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||| | ||||||||||||| ||||||||| |||  |||||| | |||||| ||||||||| | |||||||||||||||| || ||||||    
T  9121791 actaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattttgcagacgtcc 9121692  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtc 327  Q
    ||||||   ||||||| ||||||||  ||||||| | ||| |||||||||    
T  9121691 atcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 9121642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 25276743 - 25276831
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| ||||||||| |||  || |||||||||||||||||||||| | |||||||||||||||    
T  25276743 actaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtccctgaattt 25276831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 50554164 - 50554252
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||  ||||| ||||||||| |||||||||    
T  50554164 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgtaaaatagctatttagttcctgaattt 50554252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 178 - 258
Target Start/End: Original strand, 52641889 - 52641969
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtcc 258  Q
    |||||||||||||||||||||||||||||||||||||| | |||| |||||| ||||||||||||||||| ||||||||||    
T  52641889 actaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctgaattttgcgaaatatatatttagtcc 52641969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 178 - 257
Target Start/End: Original strand, 25278855 - 25278934
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtc 257  Q
    ||||||||||||||||| |||||||||||||||||||| |||||| | |||| |||||||||||||||||||||||||||    
T  25278855 actaatacctcaaattcatccttgaattttcaaaaatcagtcaaatttgtccctgaattttgcgaaatatctatttagtc 25278934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 180 - 266
Target Start/End: Original strand, 3011858 - 3011944
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    ||||||||||||||||||||| |||||| ||||||| |||||| |||| | ||||||||||||||||||||||||||| ||||||||    
T  3011858 taatacctcaaattcgtccttaaattttaaaaaatcagtcaaattcgttcctgaattttgcgaaatatctatttagtctctgaattt 3011944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 187 - 360
Target Start/End: Complemental strand, 36895624 - 36895451
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    ||||||| |||| ||||||||||    ||||||||  |||||| | |||| ||||||||||| | |||||||||||||||  || ||||||||||||| |    
T  36895624 tcaaatttgtccctgaattttcacgcgtcggtcaacttcgtccatcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 36895525  T
Q  287 gtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtggc 360  Q
    ||||||  ||||||  ||||||||||   || |||| |||| ||||||||||||||||||| ||||| ||||||    
T  36895524 gtcccttcgtccaagtgctccgttagccatgctgatctgtcgtcttgcatgttgtgttgtcttgtacgcgtggc 36895451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 34776570 - 34776658
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| ||||||||| |||  |||||| |||||||| ||||||||| | |||||||||||||||    
T  34776570 actaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 34776658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 46582011 - 46582099
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||| ||||||||||||| ||||||||| |||  |||||| |||||||||||||||||| | |||||||||||||||    
T  46582011 actaatacctcaaatttgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46582099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 8167943 - 8168029
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaat 264  Q
    |||||||||||||||||||||||||||||| ||||||||| |||  |||||  |||||||||||||||||| | |||||||||||||    
T  8167943 actaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtctctgaattttgcgaaatatcaaattagtccctgaat 8168029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 187 - 360
Target Start/End: Original strand, 31801643 - 31801816
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    |||||||||||| | |||||||| |  ||||||||  |||||| | |||| ||||||||||| | ||||||| | |||||   | ||||||||||||| |    
T  31801643 tcaaattcgtccctaaattttcacacgtcggtcaacttcgtccctcaattatgcgaaatatcaacttagtccttaaatttgtgagacgtccatcaaaaag 31801742  T
Q  287 gtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtggc 360  Q
    ||||||| ||||||  ||||||||||   || |||| |||| ||||||||||||||||||| ||||| ||||||    
T  31801743 gtccctccgtccaagtgctccgttagccatgctgatttgtcgtcttgcatgttgtgttgtcttgtacgcgtggc 31801816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 4854411 - 4854499
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||| ||||||||||||||||||||| |||||||| ||||  |||||| |||||||||||||| ||| | |||||||||||||||    
T  4854411 actaatacttcaaattcgtccttgaattttgaaaaatcgttcaatttcgtccctgaattttgcgaaagatcaaattagtccctgaattt 4854499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 8169656 - 8169568
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| ||||||||| |||  |||||| |||||||| | ||||||| | |||||||||||||||    
T  8169656 actaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacaaaatatcaaattagtccctgaattt 8169568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 9120040 - 9120128
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||| | ||||||||||||| |||||||||||||  |||||| |||||||| ||||||||| | |||||||||||||||    
T  9120040 actaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 9120128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 27089367 - 27089279
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| |||||||||  ||  |||||||||||||||| |||||||| | ||| |||||||||||    
T  27089367 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccttgaattttgtgaaatatcaaattaatccctgaattt 27089279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 37346050 - 37345962
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| ||||||||  |||  || ||| |||||||||||||||||| | |||||||||||||||    
T  37346050 actaatacctcaaattcgtccttgaattttgaaaaatcgaccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 37345962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 6816866 - 6816933
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaat 245  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||| ||||    
T  6816866 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaat 6816933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 188 - 266
Target Start/End: Original strand, 33599229 - 33599307
Alignment:
Q  188 caaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||| | ||| || ||||||||    
T  33599229 caaattcgtccttgaattttgaaaaatcggtcaaattcgtccatgaattttgcgaaatatcaaattaatctctgaattt 33599307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 180 - 266
Target Start/End: Original strand, 51894570 - 51894656
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||| |||||||||| |||||||||| |||||| ||||||| | |||  ||||||||||||||||| ||||||||||||||||||    
T  51894570 taatacatcaaattcgttcttgaattttaaaaaatgggtcaaatttgtctctgaattttgcgaaatatatatttagtccctgaattt 51894656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 178 - 239
Target Start/End: Original strand, 33599188 - 33599249
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttg 239  Q
    |||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||    
T  33599188 actaatacctcaaattcgtccttgaattttgaaaaatcgggcaaattcgtccttgaattttg 33599249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 187 - 360
Target Start/End: Original strand, 42134492 - 42134665
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    ||||||||||||||||||||| |    |||| |||| || ||| | |||| ||||||||||| | |||||||||||||||  || ||||||||||||| |    
T  42134492 tcaaattcgtccttgaatttttacgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 42134591  T
Q  287 gtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtggc 360  Q
    ||||||| ||||||  ||||||||||   || |||  ||||  | |||||| ||||||||| ||||||||||||    
T  42134592 gtccctccgtccaagtgctccgttagccatgttgacatgtcaccctgcatgctgtgttgtcttgtacacgtggc 42134665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 233 - 358
Target Start/End: Original strand, 51121961 - 51122086
Alignment:
Q  233 aattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctctt 332  Q
    |||||||| ||||||| |||| ||||||||||||  |  |||||||||||||||||||||| ||||||||| || ||||||| || |||  || |  | |    
T  51121961 aattttgcaaaatatcaatttcgtccctgaatttctctcacgtccatcaaaatggtccctccgtccaaaaggtctgttagtgatgttgagctggctccct 51122060  T
Q  333 gcatgttgtgttgtcctgtacacgtg 358  Q
    ||||||||||||||| ||||||||||    
T  51122061 gcatgttgtgttgtcatgtacacgtg 51122086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 2871164 - 2871076
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    ||||||| |||||||||||||||||||||| |||||||||  ||| |||||| |||||||||||||||| |||||| |||  |||||||    
T  2871164 actaatatctcaaattcgtccttgaatttttaaaaatcggctaaattcgtccctgaattttgcgaaatagctattttgtctttgaattt 2871076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 178 - 258
Target Start/End: Complemental strand, 37088224 - 37088144
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtcc 258  Q
    ||||||||||||||||| |||||||||||| ||||||||| |||| |||| | |||||||||||||||| |||||| ||||    
T  37088224 actaatacctcaaattcttccttgaattttaaaaaatcggccaaattcgttcctgaattttgcgaaatagctattttgtcc 37088144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 47011457 - 47011545
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||| | ||||||||||||| ||||||||| |||  |||||| |||||||| ||||||||| | |||||||||||||||    
T  47011457 actaatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccatgaatttttcgaaatatcaaattagtccctgaattt 47011545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 233 - 360
Target Start/End: Complemental strand, 46638875 - 46638748
Alignment:
Q  233 aattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctctt 332  Q
    |||| ||||||||||| | ||||||| |||||||  || ||||||| ||||| |||||||| ||||||  ||||||||||   || |||| ||||  |||    
T  46638875 aattatgcgaaatatcaacttagtccttgaatttgtcagacgtccaccaaaaaggtccctccgtccaagtgctccgttagccatgctgatctgtcgcctt 46638776  T
Q  333 gcatgttgtgttgtcctgtacacgtggc 360  Q
    ||||||||||||||| ||||| ||||||    
T  46638775 gcatgttgtgttgtcttgtacgcgtggc 46638748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 178 - 237
Target Start/End: Original strand, 45044950 - 45045009
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattt 237  Q
    |||||||||||||||||||||||||||||| |||||| |||| || |||||| |||||||    
T  45044950 actaatacctcaaattcgtccttgaattttaaaaaattggtccaattcgtccctgaattt 45045009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 260 - 358
Target Start/End: Original strand, 43868697 - 43868795
Alignment:
Q  260 tgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    ||||||| |||||| ||||||||||| |||| || ||||||| |||||||||||| || |||  |||| || |||||||  ||||||| ||||||||||    
T  43868697 tgaatttaacaaacatccatcaaaatagtccttccgtccaaatgctccgttagtgctgctgagttgtcgtcatgcatgtcatgttgtcttgtacacgtg 43868795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 1444269 - 1444181
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||| | |||||| |||||| ||||||||| |||  | |||| |||||||| | ||||||| | |||||||||||||||    
T  1444269 actaatacctcaaaatagtccttaaattttgaaaaatcggccaattttgtccctgaatttttcaaaatatcaaattagtccctgaattt 1444181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 360
Target Start/End: Complemental strand, 45381069 - 45380925
Alignment:
Q  216 ggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtgg 315  Q
    ||||||| || ||| | |||| ||||||||||| | ||||| | |||||||  || ||||||||||||| ||| |||| ||||||  ||||||||||       
T  45381069 ggtcaaattcatccctcaattatgcgaaatatcaacttagttcatgaatttgtcagacgtccatcaaaaaggttcctccgtccaagtgctccgttagcca 45380970  T
Q  316 tggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtggc 360  Q
    ||||||  ||||  | |||||| ||||||||| ||||||||||||    
T  45380969 tggtgacatgtcgccctgcatgctgtgttgtcttgtacacgtggc 45380925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 407 - 545
Target Start/End: Complemental strand, 19598016 - 19597878
Alignment:
Q  407 aggaagacgaaaccagacaacaaaacataggcagcgacgctggtccgaagcggaaacacaacctagatcgataaaaggcatctgttggtgacaaggagaa 506  Q
    ||||||| ||||||  |||||| ||||  |||| |||||| |||| |||| |||||||||||||||||||  || || |||| || ||| ||||||||||    
T  19598016 aggaagatgaaacccaacaacagaacacgggcaacgacgccggtctgaagtggaaacacaacctagatcgtaaacagacatccgtcggtaacaaggagaa 19597917  T
Q  507 ggc-tgtcgtcgccgaagtaaatatcaactaaaccaaaaa 545  Q
    ||| | |||| ||||||||||| | |||| || |||||||    
T  19597916 ggcgtctcgt-gccgaagtaaacaacaaccaagccaaaaa 19597878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 293
Target Start/End: Original strand, 27940626 - 27940724
Alignment:
Q  195 gtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctc 293  Q
    |||| |||||||||| |  | ||||||| |||||| | |||| ||||||||||| ||||| ||| |||||||  || ||||||||||||| ||||||||    
T  27940626 gtccctgaattttcacaggttggtcaaattcgtccctcaattatgcgaaatatcaatttaatccttgaatttatcagacgtccatcaaaaaggtccctc 27940724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 474
Target Start/End: Original strand, 31586273 - 31586351
Alignment:
Q  396 cacaaatctagaggaagacgaaaccagacaacaaaacataggcagcgacgctggtccgaagcggaaacacaacctagat 474  Q
    |||||||| |||| |||||||||||  |||||||||||  ||||||||||| |||| ||||||| ||||| ||| ||||    
T  31586273 cacaaatccagagaaagacgaaacccaacaacaaaacacgggcagcgacgccggtctgaagcgggaacacgacccagat 31586351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 187 - 360
Target Start/End: Complemental strand, 18184057 - 18183885
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    ||||||||||| ||||||||| |    |||| |||| || ||| | |||| ||||||||||| | |||||||||||||||  || |||||||||||||      
T  18184057 tcaaattcgtctttgaatttttacggttcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaat 18183958  T
Q  287 gtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtggc 360  Q
    |||||| |   |||  ||||||||||   || |||| |||| ||  ||||||||||||||| ||||||||||||    
T  18183957 gtccct-tcatcaagtgctccgttagccatgctgatttgtcgtccagcatgttgtgttgtcttgtacacgtggc 18183885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 475
Target Start/End: Complemental strand, 41919968 - 41919892
Alignment:
Q  399 aaatctagaggaagacgaaaccagacaacaaaacataggcagcgacgctggtccgaagcggaaacacaacctagatc 475  Q
    ||||||||||||||| |||| |  |||||||||||  |||| ||||||||||  ||||||||| ||||||| |||||    
T  41919968 aaatctagaggaagatgaaatcccacaacaaaacacgggcaacgacgctggtttgaagcggaaccacaacccagatc 41919892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 1442551 - 1442613
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgc 240  Q
    |||||||||||| | | ||||||||||||| ||||||||| |||  |||||| ||||||||||    
T  1442551 actaatacctcacaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattttgc 1442613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 407 - 509
Target Start/End: Original strand, 24450450 - 24450551
Alignment:
Q  407 aggaagacgaaaccagacaacaaaacataggcagcgacgctggtccgaagcggaaacacaacctagatcgataaaaggcatctgttggtgacaaggagaa 506  Q
    ||||||| ||||||  |||||||||||  ||||||||||| | |  ||||||| ||||| |||||| |||  || |||||||||  ||||||||||||||    
T  24450450 aggaagatgaaacccaacaacaaaacacgggcagcgacgcagttt-gaagcgggaacactacctaggtcgtaaacaggcatctgacggtgacaaggagaa 24450548  T
Q  507 ggc 509  Q
    |||    
T  24450549 ggc 24450551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 293
Target Start/End: Complemental strand, 47269570 - 47269464
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    |||||||||||| ||||||||||    |||| |||| | |||| | |||| | |||||| || ||||  |||||||||||  |||||||||||||||| |    
T  47269570 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatacgaaatttcaatttcatccctgaatttgtcaaacgtccatcaaaaag 47269471  T
Q  287 gtccctc 293  Q
    |||||||    
T  47269470 gtccctc 47269464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 252 - 358
Target Start/End: Original strand, 51544210 - 51544316
Alignment:
Q  252 ttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgt 351  Q
    ||||||||||||||| ||||| ||| |||||| |||||  || ||||||| | ||||||||||||| |||  |||| || | ||||   ||||||| |||    
T  51544210 ttagtccctgaatttaacaaatgtcaatcaaattggtcattccgtccaaatggtccgttagtggtgctgagttgtcttcctacatggcttgttgtcttgt 51544309  T
Q  352 acacgtg 358  Q
    |||||||    
T  51544310 acacgtg 51544316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 266
Target Start/End: Complemental strand, 42136299 - 42136246
Alignment:
Q  213 atcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||  |||||||| |||| ||||||||||| ||||| |||||||||||    
T  42136299 atcggtcaacttcgtcctttaattatgcgaaatatcaatttaatccctgaattt 42136246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 23577637 - 23577725
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||| |||||||| ||||| |||  | ||||||||| |||  ||| |||| |||||||||||||||| | ||||||  |||||||    
T  23577637 actaatacatcaaattcatccttcaatcctgaaaaatcgggcaatttcgaccttcaattttgcgaaatatcaaattagtcaatgaattt 23577725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 133; Significance: 7e-69; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 178 - 358
Target Start/End: Original strand, 20523367 - 20523547
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||| |||||||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20523367 actaatacatcaaattcttcctagaattttcaaaaatcggtcaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtcc 20523466  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||||||| ||||||||| || |||||||||| ||||||||| |||||||||  |||||||||||||||||||    
T  20523467 atcaaaatggtccctccgtccaaaagttctgttagtggtgatgatgtgtcttcttgcatgccgtgttgtcctgtacacgtg 20523547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 181 - 358
Target Start/End: Original strand, 10568403 - 10568580
Alignment:
Q  181 aatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatc 280  Q
    ||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||| |||||||||||||||||||||| ||||| |||    
T  10568403 aatacatcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccttgaatttagcgaaatatttatttagtccctgaattttacagacgtctatc 10568502  T
Q  281 aaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    ||||| ||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||    
T  10568503 aaaatagtccctccgtccaaaagctccgttagtggtgatgatgtgtccttttgcatgttgtgttgtcatgtacacgtg 10568580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 178 - 358
Target Start/End: Original strand, 6899486 - 6899666
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||| ||||||||||||||||||||| |||||| |||||  | ||||||| |||||||||||||||||||| ||||||||| || |||    
T  6899486 actaatacctcaaatttgtccttgaattttcaaaaatcagtcaaattcgtctctaaattttgtgaaatatctatttagtccctaaattttacagacatcc 6899585  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||||||  |||||||||||||||||||| || |||||||||||||||||||||||||| || ||||||||||    
T  6899586 atcaaaatggtcccttcgtccaaaagctccgttagtgttgatgatgtgtcctcttgcatgttgtgttatcatgtacacgtg 6899666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 178 - 358
Target Start/End: Original strand, 11355223 - 11355403
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||  ||||||||  |||||||||||| | ||||||||||||||| ||| ||    
T  11355223 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtcactgaattttatgaaatatctattaactccctgaattttacagacggcc 11355322  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    | |||||||||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||| ||||||||||    
T  11355323 accaaaatggtccctccgtccaaaagctccggtagtggtgatgacgtgtcctcttgcatgttgtgttgtcatgtacacgtg 11355403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 178 - 358
Target Start/End: Complemental strand, 32439214 - 32439035
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||| ||| ||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  32439214 actaatacctcaaattagtcattgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtcc 32439115  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||||||| ||||||||| || |||||| ||| ||| |||||| |||||||| ||||||||| ||||||||||    
T  32439114 atcaaaatggtccctccgtccaaaagatctgttagtagtgatgacgtgtcc-cttgcatgatgtgttgtcttgtacacgtg 32439035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 178 - 358
Target Start/End: Original strand, 32516878 - 32517058
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||| | ||||| |||||||| || ||||||||||| ||||||    
T  32516878 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttacaaaatacctatttagcccttgaattttacatacgtcc 32516977  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||| ||||||| ||||||||||||||||||||||| ||| |||| |||||||||| |||| |||| ||||||||||    
T  32516978 atcaaaattgtccctccgtccaaaagctccgttagtggtgatgacgtgttctcttgcatgatgtgctgtcatgtacacgtg 32517058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 178 - 358
Target Start/End: Complemental strand, 13613705 - 13613525
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||| ||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||| | ||||||||||||||||||| ||||||    
T  13613705 actaataccttaaattcgtccttgaattttgaaaaatcggtcaaattcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtcc 13613606  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||| | ||||||| ||||||||| ||| ||||||||| ||||||| | |||| |||| ||||||||||| ||||||||    
T  13613605 atcaaattagtccctccgtccaaaaggtccattagtggtgatgatgtggcttctttcatgctgtgttgtcctatacacgtg 13613525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 180 - 346
Target Start/End: Complemental strand, 7373079 - 7372913
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccat 279  Q
    |||||||||||||||||  ||||||||| |||||| ||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||  |||||||    
T  7373079 taatacctcaaattcgtgattgaatttttaaaaattggtcaaattcgtccctgaattttgcgaaatatttatttagtccctgaattttacaggcgtccat 7372980  T
Q  280 caaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgt 346  Q
    |||||||||||||| ||||||||||||| ||||||||| |||||||| |||||  ||| ||||||||    
T  7372979 caaaatggtccctccgtccaaaagctccattagtggtgatgatgtgtgctcttatatgctgtgttgt 7372913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 231 - 358
Target Start/End: Original strand, 9398714 - 9398841
Alignment:
Q  231 tgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctc 330  Q
    |||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||| ||||||||| ||||||||||||| ||||||||| |     
T  9398714 tgaattttgcgaaatatctatttagtccctgaattttatagacgttcatcaaaatggtccctccgtccaaaagttccgttagtggtgatgatgtgtcatt 9398813  T
Q  331 ttgcatgttgtgttgtcctgtacacgtg 358  Q
    ||||||||||||||||||||||||||||    
T  9398814 ttgcatgttgtgttgtcctgtacacgtg 9398841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 192 - 358
Target Start/End: Complemental strand, 14338584 - 14338418
Alignment:
Q  192 ttcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccc 291  Q
    |||||||||||||||| ||||||| | |||| |||||||  ||||||||||||| |||| ||  ||||||||||| ||| ||||||||||||||||||||    
T  14338584 ttcgtccttgaatttttaaaaatcagccaaattcgtcctcaaattttgcgaaatgtctaattcatccctgaatttcacagacgtccatcaaaatggtccc 14338485  T
Q  292 tctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    || || |||||||||||||| || || |||||| |||| ||||||| ||||||||||||||||||||    
T  14338484 tccgttcaaaagctccgttactgatgatgatgtatcctgttgcatgatgtgttgtcctgtacacgtg 14338418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 255 - 358
Target Start/End: Original strand, 7049835 - 7049938
Alignment:
Q  255 gtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtaca 354  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||    
T  7049835 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttcgtggtgatgatgtgtcctcttgcatgttgtgttgtcatgtaca 7049934  T
Q  355 cgtg 358  Q
    ||||    
T  7049935 cgtg 7049938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 9400123 - 9400035
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| ||||||| |||||| || |||||||||||||||||||||||| |||||||| ||||||    
T  9400123 actaatacctcaaattcgtccttgaattttgaaaaatcagtcaaattcatccttgaattttgcgaaatatctaattagtccccgaattt 9400035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 178 - 311
Target Start/End: Complemental strand, 32456014 - 32455881
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||| | ||||||||||||| |||||||||||||  |||||| |||||||| ||||||||| | |||||| ||||||||| || ||||||    
T  32456014 actaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtcactgaattttgcagacgtcc 32455915  T
Q  278 atcaaaatggtccctctgtccaaaagctccgtta 311  Q
    ||||||   ||||||| ||||||||  |||||||    
T  32455914 atcaaatcagtccctccgtccaaaatgtccgtta 32455881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 178 - 283
Target Start/End: Complemental strand, 6902985 - 6902881
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||| | ||||||||| ||||||||||||||||  ||||||   ||| ||||    
T  6902985 actaatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccctaaattttgcg-aatatctatttagtcctcgaatttacaaaatgtcc 6902887  T
Q  278 atcaaa 283  Q
    ||||||    
T  6902886 atcaaa 6902881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 178 - 283
Target Start/End: Complemental strand, 10570007 - 10569902
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||||||||||||| ||||||| | |||| |||||| |||||||||| |||||||||||||||||  ||||||   ||| ||||    
T  10570007 actaatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccatgaattttgcaaaatatctatttagtcctcgaatttacaaaatgtcc 10569908  T
Q  278 atcaaa 283  Q
    ||||||    
T  10569907 atcaaa 10569902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 11357282 - 11357194
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||| ||||||||||||||||||||| |||||||||||||| |||||| |||||||||  ||||| | |||||||||||||||||    
T  11357282 actaatacatcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgaaaaatagcaatttagtccctgaattt 11357194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 32518585 - 32518497
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| ||||||||| |||  || ||| |||||||||||||||||| | |||||||||||||||    
T  32518585 actaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 32518497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 195 - 311
Target Start/End: Original strand, 3456766 - 3456882
Alignment:
Q  195 gtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctct 294  Q
    ||||||||||||| ||||||||| |||  |||||| |||||||| ||||||||| | |||||||||||||||| || ||||||||||||   |||||||     
T  3456766 gtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctcc 3456865  T
Q  295 gtccaaaagctccgtta 311  Q
    ||||||||  |||||||    
T  3456866 gtccaaaatatccgtta 3456882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 7371176 - 7371264
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    ||||||||||||| |||||||||||||||||||||||||| |||| | |||| ||||||||||||||||  ||||| |||| |||||||    
T  7371176 actaatacctcaacttcgtccttgaattttcaaaaatcggccaaattggtccctgaattttgcgaaatagatattttgtccttgaattt 7371264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 32454249 - 32454337
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||| | ||||||||||||| ||||||||| |||  ||||||||||||||| ||||||||| | |||||||||||||||    
T  32454249 actaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccttgaatttttcgaaatatcaaattagtccctgaattt 32454337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 180 - 258
Target Start/End: Original strand, 21068628 - 21068706
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtcc 258  Q
    ||||||||||||||||||||||||||||||| |||| |||||| ||||||   |||||| |||||||||||||||||||    
T  21068628 taatacctcaaattcgtccttgaattttcaacaatcagtcaaattcgtccacaaattttacgaaatatctatttagtcc 21068706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 178 - 258
Target Start/End: Original strand, 13610691 - 13610771
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtcc 258  Q
    |||||||||| ||||||||||||||||||| |||||||| ||||| | |||| |||||||||||||||||| | |||||||    
T  13610691 actaataccttaaattcgtccttgaattttgaaaaatcgatcaaatttgtccctgaattttgcgaaatatcaaattagtcc 13610771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 18645191 - 18645104
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| ||||||||| | || |||||  |||||||||||||||||| | ||||||| |||||||    
T  18645191 actaatacctcaaattcgtccttgaattttgaaaaatcggac-aattcgtctctgaattttgcgaaatatcaaattagtccatgaattt 18645104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 20525422 - 20525334
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||| ||||||||| |||||| ||||||| || ||| |||||||||| ||||| |||||| |||| |||||||    
T  20525422 actaatacctcaaattcgtctttgaatttttaaaaataggtcaaattcatccctgaattttgcaaaatagctattttgtccttgaattt 20525334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 224 - 360
Target Start/End: Complemental strand, 3018509 - 3018373
Alignment:
Q  224 tcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatg 323  Q
    |||||| | |||| ||||||||||| | |||||||||||||||  || ||||||||||||| ||||||||  |||||  ||||||||||   || ||||     
T  3018509 tcgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccatccaagtgctccgttagccatgttgatc 3018410  T
Q  324 tgtcctcttgcatgttgtgttgtcctgtacacgtggc 360  Q
    | || ||||||||| ||||||||| ||||| ||||||    
T  3018409 tatcgtcttgcatgatgtgttgtcttgtacgcgtggc 3018373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 3480745 - 3480657
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||| | ||||||||||||| ||||||||| |||  |||||| |||||||| ||||||||| |  ||||||||||||||    
T  3480745 actaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaactagtccctgaattt 3480657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 178 - 256
Target Start/End: Complemental strand, 7051333 - 7051255
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagt 256  Q
    |||||||||| |||||||   ||||||||| ||||||| |||||| |||||  ||||||||||||||||||||||||||    
T  7051333 actaataccttaaattcgaatttgaattttaaaaaatcagtcaaattcgtctctgaattttgcgaaatatctatttagt 7051255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 8605413 - 8605351
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgc 240  Q
    |||||||||||||||||||||||||||||||||||||| | |||| |||||| | ||||||||    
T  8605413 actaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctaaattttgc 8605351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 32437141 - 32437208
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaat 245  Q
    |||||||||||||||| ||| ||||||||| ||||||||| |||  |||||| |||||||||||||||    
T  32437141 actaatacctcaaatttgtcattgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaat 32437208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 252 - 358
Target Start/End: Original strand, 11163875 - 11163981
Alignment:
Q  252 ttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgt 351  Q
    ||||||||||||||| ||||||||| |||||| | |||| || ||||||| || |||||||||||| |||  |||| || ||||||   ||||||| |||    
T  11163875 ttagtccctgaatttaacaaacgtcaatcaaattagtccttccgtccaaatgcaccgttagtggtgctgagttgtcttcctgcatggcttgttgtcttgt 11163974  T
Q  352 acacgtg 358  Q
    |||||||    
T  11163975 acacgtg 11163981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 181 - 255
Target Start/End: Original strand, 33276805 - 33276879
Alignment:
Q  181 aatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttag 255  Q
    |||| ||||| |||||||||||||||| ||||||| |||||| ||||   | |||||||||||||||||||||||    
T  33276805 aataactcaacttcgtccttgaattttaaaaaatcagtcaaattcgtttctaaattttgcgaaatatctatttag 33276879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 180 - 215
Target Start/End: Original strand, 21091109 - 21091144
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatc 215  Q
    ||||||||||||||||||||||||||||||||||||    
T  21091109 taatacctcaaattcgtccttgaattttcaaaaatc 21091144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 219 - 360
Target Start/End: Original strand, 2968181 - 2968322
Alignment:
Q  219 caaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtgg 318  Q
    |||| |||||| | |||| ||||||||||| ||||| |||||||||||  || ||||||||||||| ||||| || ||  |   ||||||||||  |||     
T  2968181 caaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccatccgttaacgggctccgttagccgtgc 2968280  T
Q  319 tgatgtgtcctcttgcatgttgtgttgtcctgtacacgtggc 360  Q
    |||  ||||  ||||||||||||| |||| ||||| ||||||    
T  2968281 tgacatgtcgccttgcatgttgtgctgtcttgtacgcgtggc 2968322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 181 - 238
Target Start/End: Original strand, 7049790 - 7049847
Alignment:
Q  181 aatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaatttt 238  Q
    |||| ||||||||| |||||||||||||||||||| | |||| |||||| ||||||||    
T  7049790 aatatctcaaattcttccttgaattttcaaaaatcagccaaattcgtccctgaatttt 7049847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 256 - 358
Target Start/End: Complemental strand, 25172154 - 25172052
Alignment:
Q  256 tccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacac 355  Q
    ||||||||||| |||||||||||| ||||| |||| || ||||||| ||||| |||||  || |||  |||  || |||||||  ||||||| |||||||    
T  25172154 tccctgaatttaacaaacgtccataaaaatagtccttccgtccaaatgctccattagtattgttgagttgttgtcctgcatgtcatgttgtcttgtacac 25172055  T
Q  356 gtg 358  Q
    |||    
T  25172054 gtg 25172052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 293
Target Start/End: Original strand, 29077338 - 29077444
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    |||||||||||| ||||||||||    |||| |||| | |||| | |||| |||||||| || ||||  |||||||||||  || ||||||||||||| |    
T  29077338 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccatcaaaaag 29077437  T
Q  287 gtccctc 293  Q
    |||||||    
T  29077438 gtccctc 29077444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 131; Significance: 1e-67; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 180 - 358
Target Start/End: Complemental strand, 41761867 - 41761689
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccat 279  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||||   |||||||||||||||||||||||||||||||||||||| ||||||||    
T  41761867 taatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtcccgaaattttgcgaaatatctatttagtccctgaattttacagacgtccat 41761768  T
Q  280 caaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||| |||||| || ||||||||||    
T  41761767 caaaatggtccctccgtccaaaagcttcgttagtggtgatgatgtgtcctcttgcatgctgtgttctcatgtacacgtg 41761689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 178 - 358
Target Start/End: Original strand, 49523125 - 49523305
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||| ||||||||| |||||||||  ||| |||||| |||||||||||||||||||||||||||||||||||||||| |||| |    
T  49523125 actaatacctcaaattcgtcattgaattttaaaaaatcggctaaattcgtccatgaattttgcgaaatatctatttagtccctgaattttacagacgttc 49523224  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||||||| ||||||||  ||||||||||||| ||||||| | ||||||||||||||||||| ||||||||||    
T  49523225 atcaaaatggtccctccgtccaaaaaatccgttagtggtgatgatgtgccttcttgcatgttgtgttgtcttgtacacgtg 49523305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 178 - 358
Target Start/End: Original strand, 51011927 - 51012106
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    ||||||| |||||||||||||||||||||| |||||||||||||| || | ||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  51011927 actaatatctcaaattcgtccttgaattttaaaaaatcggtcaaattctttcttgaattttgcgaaatatctatttagtctctgaattttacagacgtcc 51012026  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||||||| |||||||||||| |||||| ||| ||| |||||| |||||||| ||||||||| ||||||||||    
T  51012027 atcaaaatggtccctccgtccaaaagctctgttagtagtgatgacgtgtcc-cttgcatgatgtgttgtcttgtacacgtg 51012106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 178 - 353
Target Start/End: Original strand, 41781540 - 41781715
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||| || |||||||||| |||||||||||||| | |||| |||||||||| |||||| |||||||||||||||||||||| || |||    
T  41781540 actaatacctcaaatttgttcttgaattttaaaaaatcggtcaaatttgtccctgaattttgcaaaatatttatttagtccctgaattttacagacatcc 41781639  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtac 353  Q
    |||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||| ||||||||| |||||    
T  41781640 atcaaaatggtccctccgtccaaaagctccgttagtgatgatgatgtgtcctcttgcatgatgtgttgtcatgtac 41781715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 178 - 354
Target Start/End: Original strand, 48813788 - 48813964
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||||||||||||||||||||| | |||| |  ||| |||||||||| |||||| |||||||| ||||||||||| | ||||||    
T  48813788 actaatacctcaaattcgtccttgaattttcaaaaatcagccaaatttatccctgaattttgcaaaatatatatttagttcctgaattttatagacgtcc 48813887  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtaca 354  Q
    |||||||||||||||  |||||||||||| ||| |||||| ||||||||||||||||||||||||||||| ||||||    
T  48813888 atcaaaatggtcccttcgtccaaaagctctgttggtggtgatgatgtgtcctcttgcatgttgtgttgtcatgtaca 48813964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 178 - 354
Target Start/End: Complemental strand, 35404568 - 35404392
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||| |||| | |||||||||| |||||||||  ||| |||||||| ||||||||||||||| |||||| ||||||||||||||| ||||||    
T  35404568 actaatacctcagattcatacttgaattttaaaaaatcggctaaattcgtccttcaattttgcgaaatatttatttaatccctgaattttacagacgtcc 35404469  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtaca 354  Q
    | ||||||||||| || ||||||||||||||||||||||| ||| |||||||||| |||||||||||||| ||||||    
T  35404468 aacaaaatggtccatccgtccaaaagctccgttagtggtgatgacgtgtcctcttccatgttgtgttgtcatgtaca 35404392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 196 - 358
Target Start/End: Complemental strand, 48646852 - 48646690
Alignment:
Q  196 tccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctctg 295  Q
    ||||||||||||||||| || |  ||| |||||||||||||| |||||||||||||||||||||||||||||||| || | |||||||||||||| || |    
T  48646852 tccttgaattttcaaaagtcagctaaattcgtccttgaatttagcgaaatatctatttagtccctgaattttacagaccttcatcaaaatggtccttccg 48646753  T
Q  296 tccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||| | ||||||||    
T  48646752 tccaaaagcttcgttagtggtgatgatgtgtcctcttgcatgttgtgttgtcatttacacgtg 48646690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 226 - 358
Target Start/End: Original strand, 42980684 - 42980816
Alignment:
Q  226 gtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtg 325  Q
    |||| |||||||| |||||| |||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  42980684 gtccatgaattttacgaaatttctatttagtcccttaattttacagacgtccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgtg 42980783  T
Q  326 tcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||||||||||||||||||||||||    
T  42980784 tcctcttgcatgttgtgttgtcctgtacacgtg 42980816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 180 - 358
Target Start/End: Original strand, 11601674 - 11601851
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccat 279  Q
    |||||||| |||||||| |||||||||||||||||| |||||| |  |||   |||||||| |||||| |||| ||||||||||||||||| ||||||||    
T  11601674 taatacctaaaattcgttcttgaattttcaaaaatcagtcaaatttatccccaaattttgcaaaatatatatt-agtccctgaattttacagacgtccat 11601772  T
Q  280 caaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||| ||||||||||||| ||||| |||||||| || |||||||||||||||| |||||||||||| ||||||||||    
T  11601773 caaaatagtccctctgtccacaagcttcgttagtgatgctgatgtgtcctcttgcgtgttgtgttgtcatgtacacgtg 11601851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 178 - 358
Target Start/End: Original strand, 43519425 - 43519605
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||||||||||||| ||||||||| |||  |||||| |||||||||||||||||| | ||||||||||||||||||||||||||    
T  43519425 actaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacgtcc 43519524  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    ||||||   ||||||| ||||||||| ||| ||| | ||| ||||||| | ||||||||| | ||||||| || |||||||    
T  43519525 atcaaatccgtccctccgtccaaaaggtccattaatagtgatgatgtggcttcttgcatgctttgttgtcatgcacacgtg 43519605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 196 - 358
Target Start/End: Complemental strand, 52868254 - 52868092
Alignment:
Q  196 tccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctctg 295  Q
    |||||||||||| |||||||||||||| |||||  | ||||||||||||||||||||||||| |||||||| ||| ||| | |||||||||||| ||  |    
T  52868254 tccttgaattttaaaaaatcggtcaaattcgtctataaattttgcgaaatatctatttagtctctgaatttaacagacgcctatcaaaatggtcacttcg 52868155  T
Q  296 tccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||||||||||| | ||| ||||||||||||||| ||||||||| ||||||||||    
T  52868154 tccaaaagctccgttagtggcgatgacgtgtcctcttgcatgctgtgttgtcatgtacacgtg 52868092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 180 - 358
Target Start/End: Complemental strand, 2693373 - 2693196
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccat 279  Q
    ||||||||||| |||||| ||||||||| ||||||| | |||| |  | | | |||||||||||||||||||||||||  ||||||||| ||| ||||||    
T  2693373 taatacctcaacttcgtctttgaattttaaaaaatcagccaaatttattcctaaattttgcgaaatatctatttagtctttgaatttta-aaatgtccat 2693275  T
Q  280 caaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    ||||||||||| || ||||| ||| ||| |||||| || ||||||||| ||||||||| ||||||||||||||||||||    
T  2693274 caaaatggtccatccgtccataagttccattagtgatgatgatgtgtcatcttgcatgctgtgttgtcctgtacacgtg 2693196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 178 - 258
Target Start/End: Original strand, 48645256 - 48645336
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtcc 258  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||    
T  48645256 actaatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccatgaattttgcgaaatatctatttagtcc 48645336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 49524821 - 49524733
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||| ||||| |||||||||||||||||||    
T  49524821 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaattt 49524733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 35401750 - 35401838
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| ||||||||| |||| |||||| ||||||||| |||||||||||||||||| |||||||    
T  35401750 actaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgtgaaatatctatttagtccttgaattt 35401838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 319274 - 319362
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| |||||||||||||  |||||| |||||||||||||||||| | ||||| |||||||||    
T  319274 actaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaattt 319362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 4173828 - 4173740
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| ||||||||| |||  |||||| |||||||||||||||||| | |||||||||||||||    
T  4173828 actaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 4173740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 20493828 - 20493916
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||| ||||||||| ||| ||||| |||| |||| |||||||||||||||||||||||||||| |||||||||    
T  20493828 actaatacctcaaattcgtcattgaattttaaaatatcggccaaattcgttcttgaattttgcgaaatatctatttagttcctgaattt 20493916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 43507168 - 43507256
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| ||||||||| |||  |||||| |||||||||||||||||| | |||||||||||||||    
T  43507168 actaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 43507256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 43508741 - 43508653
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| ||||||||| |||  |||||| |||||||||||||||||| | |||||||||||||||    
T  43508741 actaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 43508653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 187 - 266
Target Start/End: Original strand, 39345574 - 39345653
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    ||||||||||||||||||||| ||||||||| |||| |||||| |||||||||||||||| |||||||||||||||||||    
T  39345574 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatagctatttagtccctgaattt 39345653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 33264383 - 33264471
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| |||||||||||||  |||||| |||||||||| ||||||| | ||||| |||||||||    
T  33264383 actaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaattagttcctgaattt 33264471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 51013974 - 51013886
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| |||||||||||||  |||||| |||||||||| ||||||| | | |||||||||||||    
T  51013974 actaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaatgagtccctgaattt 51013886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 178 - 263
Target Start/End: Complemental strand, 320988 - 320903
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaa 263  Q
    |||||||||||||||||||||||||||||| ||||||||| |||  || |||||||||||||||||||||| | ||||||| ||||    
T  320988 actaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtccttgaa 320903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 4169687 - 4169775
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| |||||| | ||||  |||||  |||||||||||||||||| | |||||||||||||||    
T  4169687 actaatacctcaaattcgtccttgaattttgaaaaattgatcaatttcgtctctgaattttgcgaaatatcaaattagtccctgaattt 4169775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 180 - 358
Target Start/End: Original strand, 7149542 - 7149720
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccat 279  Q
    |||||| | |||||| |||||||||||||||||||| | | || || || || ||||||||||||||| |||||  ||| ||||||| ||| | ||| ||    
T  7149542 taatacataaaattcatccttgaattttcaaaaatcagccgaattcatctttaaattttgcgaaatatttatttcatccttgaatttaacataggtcaat 7149641  T
Q  280 caaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||||| ||||||   |||  ||||||  | |||  |||| |  |||||||||||||||||||||||||||    
T  7149642 caaaatggtccctccgtccaatcactctattagtgaggctgacatgtcgttctgcatgttgtgttgtcctgtacacgtg 7149720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 214 - 360
Target Start/End: Original strand, 35996100 - 35996246
Alignment:
Q  214 tcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagt 313  Q
    ||||||||| |||||| | |||| ||| ||||||| ||||| |||||||||||  || ||||||||||||| |||||||| ||||||  ||||||||||     
T  35996100 tcggtcaaattcgtccctcaattgtgcaaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgtccaagtgctccgttagc 35996199  T
Q  314 ggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtggc 360  Q
      || |||  ||||  | |||||||||||||||| ||||||||||||    
T  35996200 catgctgacatgtcgccatgcatgttgtgttgtcttgtacacgtggc 35996246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 178 - 267
Target Start/End: Original strand, 20819986 - 20820075
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaatttt 267  Q
    ||||||||||||| |||||||||||||||||||||||| |||||| |  | | | |||||||| |||||| |||||||||||||||||||    
T  20819986 actaatacctcaacttcgtccttgaattttcaaaaatcagtcaaatttattcctaaattttgcaaaatatttatttagtccctgaatttt 20820075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 33266098 - 33266010
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    ||||||| ||||||||||| |||||||||| |||||||||  ||  |||| | |||||||||||||||||| | |||||||||||||||    
T  33266098 actaatatctcaaattcgttcttgaattttgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccctgaattt 33266010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 266
Target Start/End: Complemental strand, 43521193 - 43521109
Alignment:
Q  182 atacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||| || |||||||||| ||||||| |||||  ||||  ||||||||||||||||||| | |||||||||||||||    
T  43521193 atacctcaaatttgttcttgaattttgaaaaatcagtcaatttcgtttttgaattttgcgaaatatcaaattagtccctgaattt 43521109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 180 - 267
Target Start/End: Original strand, 2691377 - 2691463
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaatttt 267  Q
    ||||||||||| ||| || ||||||||||||||||| | |||| ||||||   |||||||| ||||||||||||||||||||||||||    
T  2691377 taatacctcaacttcatc-ttgaattttcaaaaatcagccaaattcgtccacaaattttgcaaaatatctatttagtccctgaatttt 2691463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 195 - 293
Target Start/End: Complemental strand, 44794866 - 44794768
Alignment:
Q  195 gtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctc 293  Q
    |||| |||||||||| |  ||||||||| |||||| | |||| ||||||||||| ||||| |||||||||||  || ||||||||||||| ||||||||    
T  44794866 gtccctgaattttcacacgtcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctc 44794768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 181 - 266
Target Start/End: Original strand, 11254123 - 11254208
Alignment:
Q  181 aatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    ||||||||||||||||||||||||||| ||||||||| ||||  ||||  | |||||||||||||| || ||| |||| |||||||    
T  11254123 aatacctcaaattcgtccttgaatttttaaaaatcggccaaatccgtctctaaattttgcgaaatagctcttttgtccttgaattt 11254208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 833224 - 833312
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||| | ||||||||||||| ||||||||| |||  |||||| |||||| | ||||||||| |  ||||||||||||||    
T  833224 actaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattt 833312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 5439735 - 5439647
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||| | ||||||||||||| ||||||||| |||  |||||| |||||| | ||||||||| |  ||||||||||||||    
T  5439735 actaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattt 5439647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 42982540 - 42982452
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||| | |||||  |||||||||||| ||||||| |||||| |||||| ||||||||||||||||  ||||| |||| |||||||    
T  42982540 actaatacgttaaatttttccttgaatttttaaaaatctgtcaaattcgtccctgaattttgcgaaatagttattttgtccttgaattt 42982452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 241 - 360
Target Start/End: Original strand, 2827468 - 2827587
Alignment:
Q  241 gaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttg 340  Q
    |||||||| | ||||||| |||||||  || ||||||||||||| |||||||| ||||||   |||||||||   || |||| |||| ||||||||| ||    
T  2827468 gaaatatcaacttagtccttgaatttgtcagacgtccatcaaaaaggtccctccgtccaagtcctccgttagccttgctgatctgtcgtcttgcatgatg 2827567  T
Q  341 tgttgtcctgtacacgtggc 360  Q
    ||||||| ||||| ||||||    
T  2827568 tgttgtcttgtacgcgtggc 2827587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 187 - 300
Target Start/End: Complemental strand, 44558607 - 44558494
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    |||| ||||||||||||||||||    |||| |||| || ||| | |||| ||||||||||| | |||||||||||||||  || ||||||||||||| |    
T  44558607 tcaacttcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 44558508  T
Q  287 gtccctctgtccaa 300  Q
    |||| || ||||||    
T  44558507 gtccttccgtccaa 44558494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 5437812 - 5437900
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||| | ||||||||||||| |||||||||  ||  |||||| |||||| | ||||||||| |  ||||||||||||||    
T  5437812 actaatacctcaaaatagtccttgaattttgaaaaatcggcaaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattt 5437900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 835130 - 835015
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||| | ||||||||||||| ||||||||  |||  | |||| |||||| | ||||||||| |  ||||||||||||||   |||||||     
T  835130 actaatacctcaaaatagtccttgaattttgaaaaatcgaccaattttgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaacgtca 835031  T
Q  278 atcaaaatggtccctc 293  Q
    |||||| | |||||||    
T  835030 atcaaattagtccctc 835015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 233 - 312
Target Start/End: Complemental strand, 2350575 - 2350496
Alignment:
Q  233 aattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttag 312  Q
    |||| ||||||||||| ||||| || ||||||||  || |||| |||||||| |||||||||||||||  ||||||||||    
T  2350575 aattatgcgaaatatcaatttaatctctgaatttatcagacgttcatcaaaaaggtccctctgtccaagtgctccgttag 2350496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 255 - 314
Target Start/End: Original strand, 44972489 - 44972548
Alignment:
Q  255 gtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtg 314  Q
    |||||| ||||| |||||||||||||||||| |||| || ||||||| ||||||||||||    
T  44972489 gtccctaaatttaacaaacgtccatcaaaatagtccttccgtccaaatgctccgttagtg 44972548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 214 - 293
Target Start/End: Original strand, 47941848 - 47941927
Alignment:
Q  214 tcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctc 293  Q
    ||||||||| |||||  | |||| ||||||||||| ||||| |||||||||||  || ||||||||||||| ||||||||    
T  47941848 tcggtcaaattcgtctctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctc 47941927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 293
Target Start/End: Complemental strand, 10372820 - 10372714
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    |||||||||||| ||||||||||    |||| |||| | |||| | |||| ||||||||||| ||||  |||||||||||  || ||||||||||||| |    
T  10372820 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatatcaatttcatccctgaatttgtcagacgtccatcaaaaag 10372721  T
Q  287 gtccctc 293  Q
    |||||||    
T  10372720 gtccctc 10372714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 477
Target Start/End: Complemental strand, 38929177 - 38929123
Alignment:
Q  423 acaacaaaacataggcagcgacgctggtccgaagcggaaacacaacctagatcga 477  Q
    |||||||||||  ||||| ||||| |||| |||||||||||||||||||||||||    
T  38929177 acaacaaaacacgggcagtgacgccggtctgaagcggaaacacaacctagatcga 38929123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 31051223 - 31051296
Alignment:
Q  396 cacaaatctagaggaagacgaaaccagacaacaaaacataggcagcgacgctggtccgaagcggaaacacaacc 469  Q
    |||||||||| ||||||| | ||||  |||||||||||  ||||||||||| |||| |||||||| ||||||||    
T  31051223 cacaaatctaaaggaagatgtaacccaacaacaaaacacgggcagcgacgccggtctgaagcggacacacaacc 31051296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 360
Target Start/End: Original strand, 4519476 - 4519559
Alignment:
Q  277 catcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtggc 360  Q
    |||||||| |||||||| ||||||| ||||||||||   || |||| ||||  | |||||| ||||||||| ||||||||||||    
T  4519476 catcaaaaaggtccctccgtccaaatgctccgttagccatgctgatctgtcgccctgcatgctgtgttgtcttgtacacgtggc 4519559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 358
Target Start/End: Complemental strand, 26296940 - 26296837
Alignment:
Q  255 gtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtaca 354  Q
    ||||||||||||  ||||||||||||||||| |||  ||  |||||| | || ||||||| || |||  |||| ||||||||||  ||||||| ||||||    
T  26296940 gtccctgaatttgtcaaacgtccatcaaaatagtcattccatccaaatgatctgttagtgttgatgagctgtcgtcttgcatgtcatgttgtcttgtaca 26296841  T
Q  355 cgtg 358  Q
    ||||    
T  26296840 cgtg 26296837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 553
Target Start/End: Original strand, 46699597 - 46699656
Alignment:
Q  494 gtgacaaggagaaggctgtcgtcgccgaagtaaatatcaactaaaccaaaaagcgacaag 553  Q
    ||||||||||||||||   | ||||||||||||||| |||| |||||||||||| |||||    
T  46699597 gtgacaaggagaaggcgtccatcgccgaagtaaataacaaccaaaccaaaaagcaacaag 46699656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 293
Target Start/End: Original strand, 10762591 - 10762697
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    |||||||||||| ||||||||||    |||| |||| | |||| | |||| |||||||| || ||||  |||||||||||  || ||||||||||||| |    
T  10762591 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccatcaaaaag 10762690  T
Q  287 gtccctc 293  Q
    |||||||    
T  10762691 gtccctc 10762697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 189 - 283
Target Start/End: Complemental strand, 54387958 - 54387865
Alignment:
Q  189 aaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaa 283  Q
    |||||||||||| |||||| ||||||| | |||| | || | | ||||||||||||||||||||||||||  ||||||   ||| ||||||||||    
T  54387958 aaattcgtccttaaatttttaaaaatcagccaaattagttcct-aattttgcgaaatatctatttagtcctcgaatttacaaaatgtccatcaaa 54387865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 27624845 - 27624918
Alignment:
Q  216 ggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtc 289  Q
    ||||||| || || || |||| ||||||||||| | |||||||||||||||  || ||||||||||||| ||||    
T  27624845 ggtcaaattcatctttcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtc 27624918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 314 - 358
Target Start/End: Complemental strand, 11255927 - 11255883
Alignment:
Q  314 ggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||| |||||||||||||| |||| ||||||||| ||||||||||    
T  11255927 ggtgatgatgtgtcctcttacatgctgtgttgtcttgtacacgtg 11255883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 255 - 307
Target Start/End: Original strand, 50131240 - 50131292
Alignment:
Q  255 gtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctcc 307  Q
    |||||||||||| |||||||||||||||||| |||  || ||||||| |||||    
T  50131240 gtccctgaatttgacaaacgtccatcaaaatagtcattccgtccaaatgctcc 50131292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 129; Significance: 2e-66; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 178 - 358
Target Start/End: Complemental strand, 39859352 - 39859172
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||||||||||||| ||||||||| |||| | |||| |||||||||||||||||||||||||||| ||||||||||| ||||||    
T  39859352 actaatacctcaaattcgtccttgaattttaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacgtcc 39859253  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
     ||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||| ||||||||| ||||||||||    
T  39859252 gtcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtcctcttgcatgctgtgttgtcatgtacacgtg 39859172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 178 - 358
Target Start/End: Complemental strand, 38474266 - 38474086
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||| ||||| ||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||| ||| |     
T  38474266 actaatacctcaaattagtcctcgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccttgaattttacagacgcct 38474167  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    ||||||||||||| || ||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||    
T  38474166 atcaaaatggtccatccgtccaaaagctccgttagtggtgatgatgtgtcctcttgtatgctgtgttgtcctgtacacgtg 38474086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 178 - 357
Target Start/End: Original strand, 45359337 - 45359516
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||| ||||| |||| |||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  45359337 actaataccttaaatttgtccatgaattttaaaaaatcggtcaaatccgtccttgaattttgcgaaatatctatttagtccttgaattttacagacgtcc 45359436  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgt 357  Q
    ||||||||||||||||  |||||||||||||||||||||| ||| ||||||||||||||| ||||||||| |||||||||    
T  45359437 atcaaaatggtccctccatccaaaagctccgttagtggtgatgacgtgtcctcttgcatgctgtgttgtcatgtacacgt 45359516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 178 - 354
Target Start/End: Complemental strand, 47386332 - 47386156
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    ||||||||||||||||||||||| |||||| ||||||| |||||| |||||||||||||||||||||||| ||||||||| || ||||||||| ||||||    
T  47386332 actaatacctcaaattcgtcctttaattttaaaaaatcagtcaaattcgtccttgaattttgcgaaatatttatttagtctctaaattttacagacgtcc 47386233  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtaca 354  Q
    ||||||||||||  || ||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||    
T  47386232 atcaaaatggtcattccgtccaaaagctccgttagtggtgatgatgtgttctcttgcatgatgtgttgtcctgtaca 47386156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 180 - 358
Target Start/End: Complemental strand, 24228530 - 24228352
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccat 279  Q
    ||||||||||| ||||| |||||||||| |||||| || |||| |||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  24228530 taatacctcaatttcgttcttgaattttaaaaaattggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaattttacagacgtccat 24228431  T
Q  280 caaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||||  ||||||||||||| ||||||||| ||||||||||||||||||||||||||||| | ||||||||    
T  24228430 caaaatggtcccttcgtccaaaagctccattagtggtgatgatgtgtcctcttgcatgttgtgttgtcatatacacgtg 24228352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 178 - 358
Target Start/End: Original strand, 6602336 - 6602516
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    ||||||| |||||||||| ||||||||||| |||||||||  |||||  ||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  6602336 actaataactcaaattcgaccttgaattttaaaaaatcggctaaacttatccctgaattttgcgaaatatctatttagtccctgaattttacagacgtcc 6602435  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||||||| ||||||||||||||||||||||| |||  |||||| ||||||| ||||||||| ||||||||||    
T  6602436 atcaaaatggtccctccgtccaaaagctccgttagtggtgatgacatgtccttttgcatgctgtgttgtcatgtacacgtg 6602516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 180 - 358
Target Start/End: Complemental strand, 34777036 - 34776858
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccat 279  Q
    ||||||||||||||||| ||| |||||| |||||| || |||| || | | |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  34777036 taatacctcaaattcgttcttaaattttaaaaaattggccaaattcattcctgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 34776937  T
Q  280 caaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||||| |||||||| ||||||||||| || ||| ||||||||||||||||||||||||| ||||||||||    
T  34776936 caaaatggtccctccgtccaaaaactccgttagtgatgatgacgtgtcctcttgcatgttgtgttgtcatgtacacgtg 34776858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 180 - 358
Target Start/End: Complemental strand, 37796302 - 37796124
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccat 279  Q
    |||||||||||||| ||||||||||||||||||||| | |||| |||||||  |||||||||||||||||||||||||||||||||||||  ||||||||    
T  37796302 taatacctcaaatttgtccttgaattttcaaaaatcagccaaattcgtcctcaaattttgcgaaatatctatttagtccctgaattttacggacgtccat 37796203  T
Q  280 caaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||| ||||||| ||||| |||||||||||| | || ||||||||||||||||||||||||||||| | ||||||||    
T  37796202 caaaatagtccctccgtccataagctccgttagcgatgctgatgtgtcctcttgcatgttgtgttgtcttctacacgtg 37796124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 178 - 355
Target Start/End: Complemental strand, 30940548 - 30940371
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||| ||||| || |||||||||| ||||||||| |||| |||||  | |||||| |||||||||||||||||||||||||||||||||||| |    
T  30940548 actaataccttaaatttgttcttgaattttaaaaaatcggccaaattcgtctcttaattttacgaaatatctatttagtccctgaattttacaaacgttc 30940449  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacac 355  Q
    |||||||||||| ||| ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||    
T  30940448 atcaaaatggtctctccgtccaaaagctccgttagtggtgatgatgtgtcctattgcatgctgtgttgtcctgtacac 30940371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 178 - 337
Target Start/End: Complemental strand, 37115649 - 37115490
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||| ||||||||| ||||||| |||||| |||| | |||||||||| ||||||||||||||| ||||||||||||| ||||||    
T  37115649 actaatacctcaaattcgtcattgaattttaaaaaatcagtcaaattcgttcctgaattttgcaaaatatctatttagtacctgaattttacagacgtcc 37115550  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatg 337  Q
    |||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  37115549 atcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgtgtcctcttgcatg 37115490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 199 - 358
Target Start/End: Original strand, 13168142 - 13168304
Alignment:
Q  199 ttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccct---gaattttacaaacgtccatcaaaatggtccctctg 295  Q
    ||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||   |||||||||| ||||||||||||||||||| || |    
T  13168142 ttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctcctgaattttacagacgtccatcaaaatggtccatccg 13168241  T
Q  296 tccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||||||||||||| ||| ||||| ||||||||| ||||||||| ||||||||||    
T  13168242 tccaaaagctccgttagtggtgatgacgtgtcatcttgcatgctgtgttgtcatgtacacgtg 13168304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 178 - 358
Target Start/End: Complemental strand, 27666188 - 27666008
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||||||||||||| ||||||||| |||  |||||| |||||||||||||||||| | ||||||||||||||||||||||||||    
T  27666188 actaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacgtcc 27666089  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    ||||||   ||||||| |||||||||  |||||| | ||| ||||||| | ||||||||| | ||||||||||||||||||    
T  27666088 atcaaatccgtccctccgtccaaaaggcccgttaatagtgatgatgtggcttcttgcatgctttgttgtcctgtacacgtg 27666008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 178 - 358
Target Start/End: Original strand, 56331 - 56511
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||||||||||||| |||||||||  ||  |||||| |||||||||||||||||| | ||||||||||||||||||| ||||||    
T  56331 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtcc 56430  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||     |||||| ||||||||  || |||||| ||| ||||||| | ||||||||||||||||||| ||||||||||    
T  56431 atcaattcactccctccgtccaaaatgtctgttagtagtgatgatgtggcttcttgcatgttgtgttgtcttgtacacgtg 56511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 178 - 358
Target Start/End: Complemental strand, 29996637 - 29996457
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||||||||||||| |||||||||||||  | |||| |||||||||||||||||| | ||| ||||||||||||||| ||||||    
T  29996637 actaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattaatccctgaattttacagacgtcc 29996538  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||| | |||||||  |||||||| ||||||| | ||| ||| ||| | |||| |||||| ||||||| ||||||||||    
T  29996537 atcaaattcgtccctccatccaaaaggtccgttaatagtgatgacgtggcttcttacatgttttgttgtcatgtacacgtg 29996457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 218 - 358
Target Start/End: Complemental strand, 35693455 - 35693313
Alignment:
Q  218 tcaaactcgtccttgaattttgcgaaatatctat--ttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtgg 315  Q
    ||||| |||||||||||||||||| ||||||| |  ||||||||||||||||||| ||||||||||||||||||||||  |||||||| || ||||||||    
T  35693455 tcaaattcgtccttgaattttgcggaatatctctaattagtccctgaattttacagacgtccatcaaaatggtccctccatccaaaagttctgttagtgg 35693356  T
Q  316 tggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    || |||||||||||||||||||| |||||||| ||||||||||    
T  35693355 tgatgatgtgtcctcttgcatgtagtgttgtcttgtacacgtg 35693313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 233 - 354
Target Start/End: Complemental strand, 48852415 - 48852294
Alignment:
Q  233 aattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctctt 332  Q
    |||||||| ||||||||||||| ||| ||||||||||| |||||||||||||||||| ||| |||||||||||| |||||||||| ||||||||||||||    
T  48852415 aattttgcaaaatatctatttaatccttgaattttacagacgtccatcaaaatggtctctcggtccaaaagctctgttagtggtgatgatgtgtcctctt 48852316  T
Q  333 gcatgttgtgttgtcctgtaca 354  Q
     |||| ||||||||| ||||||    
T  48852315 acatgatgtgttgtcttgtaca 48852294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 13169771 - 13169683
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||||||||||||| |||| | |||| ||||||||||||||||||||||||||||||||||||    
T  13169771 actaatacctcaaattcgtccttgaattttcaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattt 13169683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 180 - 266
Target Start/End: Original strand, 39857648 - 39857734
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||    
T  39857648 taatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtcccagaattt 39857734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 24226582 - 24226670
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||| |||| |||||||    
T  24226582 actaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccttgaattttgcgaaatagctattttgtccttgaattt 24226670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 255 - 358
Target Start/End: Complemental strand, 23906307 - 23906204
Alignment:
Q  255 gtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtaca 354  Q
    |||||| |||||||||  ||||||||||||||||||||| ||||||||||||||||| ||| | ||| ||||||||||||||| ||||||||||||||||    
T  23906307 gtccctaaattttacagtcgtccatcaaaatggtccctccgtccaaaagctccgttaatggcgatgacgtgtcctcttgcatgctgtgttgtcctgtaca 23906208  T
Q  355 cgtg 358  Q
    ||||    
T  23906207 cgtg 23906204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 180 - 266
Target Start/End: Complemental strand, 48228027 - 48227941
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||| ||||||||| |||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||    
T  48228027 taatacctcaaattcgtctttgaattttaaaaaatcggtcaaattcgtctttgaattttgcgaaatatctattttgtccctgaattt 48227941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 37113942 - 37114030
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| |||||| ||||||| || ||| |||||||||||||||||||||||||||||| |||||    
T  37113942 actaatacctcaaattcgtccttgaattttaaaaaattggtcaaattcatccctgaattttgcgaaatatctatttagtccctaaattt 37114030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 178 - 327
Target Start/End: Original strand, 20478043 - 20478192
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||| | ||||||||||||| ||||||||| |||  |||| | |||||||| ||||||||| | |||||||||||||||| || ||||||    
T  20478043 actaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtacctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtcc 20478142  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtc 327  Q
    ||||||   ||||||| ||||||||  ||||||| | ||| |||||||||    
T  20478143 atcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 20478192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 23904584 - 23904672
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||  |||||||||| ||||| ||||||||||| |||||||    
T  23904584 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtctctgaattttgcaaaatagctatttagtccatgaattt 23904672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 35403707 - 35403619
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| ||||||||| |||  |||||| |||||||||||||||||| | |||||||||||||||    
T  35403707 actaatacctcaaattcgtccttgaattttaaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 35403619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 46437108 - 46437196
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||||||||||| | |||| ||||| ||||||||||||||||| |||||| |||| |||||||    
T  46437108 actaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtcgttgaattttgcgaaatagctattttgtccttgaattt 46437196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 47384295 - 47384383
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| ||||||  | |||| ||||||||||||||||||||||||||| |||||||| ||||||    
T  47384295 actaatacctcaaattcgtccttgaattttgaaaaatgagccaaattcgtccttgaattttgcgaaatatctaattagtccccgaattt 47384383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 187 - 358
Target Start/End: Complemental strand, 33038911 - 33038740
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    ||||||||||||||||||||| |    ||||||||| || ||| | |||| ||||||||||| | |||||||||||||||| || ||||||||||||| |    
T  33038911 tcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttttcagacgtccatcaaaaag 33038812  T
Q  287 gtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    ||||||| ||||||  |||| |||||   || |||| |||| || |||||||||||||||| | ||||||||    
T  33038811 gtccctccgtccaagtgctctgttaggcatgttgatctgtcgtcctgcatgttgtgttgtcttatacacgtg 33038740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 180 - 266
Target Start/End: Complemental strand, 6605483 - 6605397
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||| ||||||||||||| |||||||||||||| | || | |||||||||||||||| |||||||||||||||||||    
T  6605483 taatacctcaaatttgtccttgaattttaaaaaatcggtcaaatttgttcctgaattttgcgaaatagctatttagtccctgaattt 6605397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 314
Target Start/End: Original strand, 13018036 - 13018172
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaa--atatctatttagtccctgaattttacaaacgtcc 277  Q
    ||||||||||||||| |||||||||||| ||||||| | |||| |||||||  ||||| |||||  ||||||||||  || |||||||| ||| ||||||    
T  13018036 taatacctcaaattcatccttgaattttaaaaaatcagccaaattcgtcctcaaatttagcgaaatatatctatttcatctctgaatttaacatacgtcc 13018135  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtg 314  Q
    |||||||||||||||| ||||||   |||||||||||    
T  13018136 atcaaaatggtccctccgtccaatcactccgttagtg 13018172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 181 - 266
Target Start/End: Original strand, 35691431 - 35691516
Alignment:
Q  181 aatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||  | |||||||||||||| |||||| |||| |||||||    
T  35691431 aatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtctctaaattttgcgaaatagctattttgtccttgaattt 35691516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 22155935 - 22155847
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||| || |||||||||||||||||||||||||| |||| |||||| |||||||||| ||||| |||||| ||||||||||||    
T  22155935 actaatacctaaacttcgtccttgaattttcaaaaatcggccaaattcgtccatgaattttgcaaaatagctattttgtccctgaattt 22155847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 22211850 - 22211762
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||| || |||||||||||||||||||||||||| |||| |||||| |||||||||| ||||| |||||| ||||||||||||    
T  22211850 actaatacctaaacttcgtccttgaattttcaaaaatcggccaaattcgtccatgaattttgcaaaatagctattttgtccctgaattt 22211762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 287 - 358
Target Start/End: Complemental strand, 46439544 - 46439473
Alignment:
Q  287 gtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    ||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||    
T  46439544 gtccctccgtccaaaagctccgttagtggtgacgatgtgtcctcttgcatgttgtgttgtcttgtacacgtg 46439473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 178 - 260
Target Start/End: Complemental strand, 46439621 - 46439539
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccct 260  Q
    ||||||| |||||||||||| ||||||||| |||||||| ||||||| ||| || ||||||||||||||||||||||||||||    
T  46439621 actaatatctcaaattcgtcattgaatttttaaaaatcgatcaaacttgtctttaaattttgcgaaatatctatttagtccct 46439539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 186 - 267
Target Start/End: Complemental strand, 13039722 - 13039641
Alignment:
Q  186 ctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaatttt 267  Q
    ||||| ||||||||||||||||||||||||  ||||| |||||| | |||||||||||||| ||||||||||||||||||||    
T  13039722 ctcaagttcgtccttgaattttcaaaaatcaatcaaattcgtccctaaattttgcgaaataactatttagtccctgaatttt 13039641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 187 - 360
Target Start/End: Complemental strand, 46996816 - 46996643
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    |||||||||||| ||||||||||    |||| |||  |||||| | |||| ||||||||||| | |||||| ||||||||  || ||||||||||||| |    
T  46996816 tcaaattcgtccctgaattttcacgcgtcggccaacttcgtccctcaattatgcgaaatatcaacttagtcactgaatttgtcagacgtccatcaaaaag 46996717  T
Q  287 gtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtggc 360  Q
    ||||||| ||||||  |||||||||| | || |||| ||||  |||||||| ||||||||| ||||| ||||||    
T  46996716 gtccctccgtccaagtgctccgttagcgatgctgatctgtcgccttgcatgctgtgttgtcttgtacgcgtggc 46996643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 34774999 - 34775087
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    ||||||| |||||||||||| ||||||||| |||||||||||||| || | | |||||||||| ||||| |||||||||||||||||||    
T  34774999 actaatatctcaaattcgtctttgaattttaaaaaatcggtcaaattcattcatgaattttgcaaaatagctatttagtccctgaattt 34775087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 35401970 - 35402058
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    ||||||| |||||||||||||||||||||| |||||||||  ||  |||||| |||||||||||||||||| | |||||||||||||||    
T  35401970 actaatatctcaaattcgtccttgaattttgaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 35402058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 187 - 360
Target Start/End: Original strand, 23953815 - 23953988
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    |||||||||||||| |||||| |    ||||| ||| |||||| | |||| ||||||||||| | ||||||| |||||||  || ||||| ||||||| |    
T  23953815 tcaaattcgtccttaaatttttacgggtcggtaaaattcgtccatcaattatgcgaaatatcaacttagtccgtgaatttgtcagacgtcaatcaaaaag 23953914  T
Q  287 gtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtggc 360  Q
    ||||||| ||||||  ||||||||||   || |||| ||||  | |||||||||||||||| ||||||||||||    
T  23953915 gtccctccgtccaagtgctccgttagccatgctgatatgtcgccatgcatgttgtgttgtcttgtacacgtggc 23953988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 178 - 283
Target Start/End: Original strand, 38549548 - 38549653
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||| ||||||||||||||||||||||||||| | |||  |||||| ||||||||| |||||||||||||| |||  ||||||   ||| ||||    
T  38549548 actaataccttaaattcgtccttgaattttcaaaaatcagccaagttcgtccctgaattttgtgaaatatctatttaatcctcgaatttacaaaatgtcc 38549647  T
Q  278 atcaaa 283  Q
    ||||||    
T  38549648 atcaaa 38549653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 78102 - 78014
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||| ||||||||| ||||||||| |||  |||||| |||||||||| ||||||| | || ||||||||||||    
T  78102 actaatacctcaaattcgtctttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaatttgtccctgaattt 78014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 20479807 - 20479719
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||| | ||||||||||||| ||||||||| |||  |||||| |||||||| ||||||||| | |||||||||||||||    
T  20479807 actaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 20479719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 266
Target Start/End: Original strand, 27664433 - 27664519
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||| ||||||||||||| ||||||||| |||  | |||| |||||||||| ||||||| | |||||||||||||||    
T  27664433 taatacctcaaattagtccttgaattttgaaaaatcggccaattttgtccctgaattttgcaaaatatcaaattagtccctgaattt 27664519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 399 - 475
Target Start/End: Original strand, 3420234 - 3420310
Alignment:
Q  399 aaatctagaggaagacgaaaccagacaacaaaacataggcagcgacgctggtccgaagcggaaacacaacctagatc 475  Q
    |||| |||||||||||||||||| |||||||||||   |||||||||| ||| |||||||||| |||||||||||||    
T  3420234 aaatttagaggaagacgaaaccaaacaacaaaacacgagcagcgacgccggttcgaagcggaaccacaacctagatc 3420310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 405 - 469
Target Start/End: Complemental strand, 38485055 - 38484991
Alignment:
Q  405 agaggaagacgaaaccagacaacaaaacataggcagcgacgctggtccgaagcggaaacacaacc 469  Q
    |||||||||||||||| ||||||||||||| ||||||||||| |||  |||||||||||||||||    
T  38485055 agaggaagacgaaacctgacaacaaaacatgggcagcgacgccggtttgaagcggaaacacaacc 38484991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 192 - 347
Target Start/End: Original strand, 1546302 - 1546457
Alignment:
Q  192 ttcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccc 291  Q
    |||||| ||||||||  ||  ||| |||||| ||||| |  |||||||||||||||| |||  |||| |||||||  |  ||||||||||||||||||||    
T  1546302 ttcgtctttgaatttataagtatcagtcaaaatcgtcttcaaattttgcgaaatatcaattgcgtccttgaatttctctcacgtccatcaaaatggtccc 1546401  T
Q  292 tctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtc 347  Q
    || ||||||||| |||||||||| || |||  || |  | ||||||||||||||||    
T  1546402 tccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtc 1546457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 214 - 360
Target Start/End: Original strand, 2167516 - 2167662
Alignment:
Q  214 tcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagt 313  Q
    ||||||||| || ||| | |||| ||||||||||| | |||||||||||||||  || ||| ||||||||| |||||||| ||||||  ||||| ||||     
T  2167516 tcggtcaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgcccatcaaaaaggtccctccgtccaagtgctccattagc 2167615  T
Q  314 ggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtggc 360  Q
      || ||| |||||  | |||||| ||||||||| ||||||||||||    
T  2167616 catgctgacgtgtcaccctgcatgatgtgttgtcttgtacacgtggc 2167662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 187 - 360
Target Start/End: Original strand, 27955380 - 27955553
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    ||||||||||||||||||||| |   ||| |  ||| || ||| | |||||| ||||||||| | ||| |  ||||||||  || ||||||||||||  |    
T  27955380 tcaaattcgtccttgaatttttacggatcagctaaattcatccctcaattttacgaaatatcaacttaatttctgaatttgtcagacgtccatcaaagag 27955479  T
Q  287 gtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtggc 360  Q
    ||||||| ||||||  |||||||||||  || ||||||||| |  |||||||||||||||| ||||||| ||||    
T  27955480 gtccctccgtccaagtgctccgttagtcatgctgatgtgtcgtgctgcatgttgtgttgtcttgtacacttggc 27955553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 255 - 358
Target Start/End: Original strand, 6056844 - 6056947
Alignment:
Q  255 gtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtaca 354  Q
    |||| ||||||| |||||||||||||||||| |||| || ||||||| |||||||||||| || |||  |||| || |||||||  ||||||  ||||||    
T  6056844 gtccttgaatttaacaaacgtccatcaaaatagtccttccgtccaaatgctccgttagtgctgctgagctgtcgtcctgcatgtcctgttgtattgtaca 6056943  T
Q  355 cgtg 358  Q
    ||||    
T  6056944 cgtg 6056947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 178 - 237
Target Start/End: Original strand, 29994907 - 29994966
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattt 237  Q
    |||||||||||||||||||||||||||||| ||||||||| |||  |||||| |||||||    
T  29994907 actaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattt 29994966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 360
Target Start/End: Original strand, 40784396 - 40784529
Alignment:
Q  227 tccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgt 326  Q
    ||||| |||| ||||||||||| | ||||||  |||||||  || || |||||||||| |||||||| ||||||| || | |||| |  || |||| |||    
T  40784396 tccttcaattatgcgaaatatcaacttagtctttgaatttgtcagacatccatcaaaaaggtccctccgtccaaatgcgctgttaatcatgctgatctgt 40784495  T
Q  327 cctcttgcatgttgtgttgtcctgtacacgtggc 360  Q
    | || |||||||||||||||| | ||||||||||    
T  40784496 cgtcctgcatgttgtgttgtcttatacacgtggc 40784529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 178 - 263
Target Start/End: Complemental strand, 45361364 - 45361279
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaa 263  Q
    ||||||||||||||||| |||||||||||| |||||| ||||||  | || | |||||||||| |||||  |||||||||| ||||    
T  45361364 actaatacctcaaattcttccttgaattttaaaaaatgggtcaattttgttcctgaattttgcaaaatagttatttagtccttgaa 45361279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 23906355 - 23906295
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaatttt 238  Q
    ||||||||||||||||| |||||||||||| ||||||||| |||| |||||| | ||||||    
T  23906355 actaatacctcaaattcctccttgaattttaaaaaatcggccaaattcgtccctaaatttt 23906295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 358
Target Start/End: Original strand, 23962377 - 23962485
Alignment:
Q  250 atttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcct 349  Q
    |||| |||||||||||| ||||||||| |||||||| |||| || ||| ||| |||||||||||| || |||  |||| || ||||||   ||||||| |    
T  23962377 attttgtccctgaatttaacaaacgtcaatcaaaatagtccttccgtcaaaatgctccgttagtgctgctgagttgtcttcctgcatggcttgttgtctt 23962476  T
Q  350 gtacacgtg 358  Q
    |||||||||    
T  23962477 gtacacgtg 23962485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 266
Target Start/End: Complemental strand, 48311803 - 48311733
Alignment:
Q  196 tccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||| ||||||| |||||| || ||||| ||||||||||||| |||| ||  |||||||||||    
T  48311803 tccttgaattttaaaaaatcagtcaaattcatccttaaattttgcgaaatgtctaattcatccctgaattt 48311733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 400 - 469
Target Start/End: Complemental strand, 38305745 - 38305676
Alignment:
Q  400 aatctagaggaagacgaaaccagacaacaaaacataggcagcgacgctggtccgaagcggaaacacaacc 469  Q
    ||||||||||||||||||| |  ||||||||||| ||||||| |||| |||  ||||||||| |||||||    
T  38305745 aatctagaggaagacgaaatccaacaacaaaacacaggcagcaacgccggtttgaagcggaaccacaacc 38305676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 187 - 312
Target Start/End: Complemental strand, 47341800 - 47341675
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 286  Q
    |||||||||||||||||||||||    |||| |||| || ||| | |||| ||||||||||| | |||||||||||||||  || ||||  ||||||| |    
T  47341800 tcaaattcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgttaatcaaaaag 47341701  T
Q  287 gtccctctgtccaaaagctccgttag 312  Q
    ||  ||| ||||||  ||||||||||    
T  47341700 gtatctccgtccaagtgctccgttag 47341675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 314
Target Start/End: Original strand, 31913547 - 31913606
Alignment:
Q  255 gtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtg 314  Q
    |||||||||||  |||||||||||||||||| || | || ||||||| ||||||||||||    
T  31913547 gtccctgaattcaacaaacgtccatcaaaatagttcttccgtccaaatgctccgttagtg 31913606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 267
Target Start/End: Original strand, 37791657 - 37791744
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaatttt 267  Q
    |||||||| || |||||| || |||||| ||||||| | |||| || |||   |||||||| ||||||||||||||||||| ||||||    
T  37791657 taatacctaaacttcgtctttaaattttaaaaaatcagccaaattcatccccaaattttgccaaatatctatttagtccctaaatttt 37791744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 287
Target Start/End: Original strand, 43009347 - 43009394
Alignment:
Q  240 cgaaatatctatttagtccctgaattttacaaacgtccatcaaaatgg 287  Q
    ||||||| |||||| |||||||||||| ||||| ||||||||||||||    
T  43009347 cgaaatagctattttgtccctgaatttaacaaatgtccatcaaaatgg 43009394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 293
Target Start/End: Complemental strand, 35344372 - 35344298
Alignment:
Q  219 caaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctc 293  Q
    |||| |||||| | |||| ||||||||||| ||||| |||||||||||   | ||||||||||||| ||||||||    
T  35344372 caaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttataagacgtccatcaaaaaggtccctc 35344298  T

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Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 476
Target Start/End: Complemental strand, 1320202 - 1320133
Alignment:
Q  407 aggaagacgaaaccagacaacaaaacataggcagcgacgctggtccgaagcggaaacacaacctagatcg 476  Q
    |||||| |||||||  |||||||||||  | || |||||| ||||||||| || ||||||||||||||||    
T  1320202 aggaagccgaaacccaacaacaaaacacggacatcgacgccggtccgaagtgggaacacaacctagatcg 1320133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 292
Target Start/End: Complemental strand, 31915084 - 31915047
Alignment:
Q  255 gtccctgaattttacaaacgtccatcaaaatggtccct 292  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  31915084 gtccctgaatttaacaaacgtccatcaaaatagtccct 31915047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 207
Target Start/End: Complemental strand, 35693464 - 35693435
Alignment:
Q  178 actaatacctcaaattcgtccttgaatttt 207  Q
    ||||||||||||||||||||||||||||||    
T  35693464 actaatacctcaaattcgtccttgaatttt 35693435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 284
Target Start/End: Complemental strand, 38613595 - 38613498
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaa 284  Q
    |||||||||||||| ||||||||    |||| |||| || ||| | |||| ||||||||||| | |||||||||||||||  || |||||||| ||||    
T  38613595 tcaaattcgtccttcaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccataaaaa 38613498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 187 - 283
Target Start/End: Original strand, 7401903 - 7401999
Alignment:
Q  187 tcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaa 283  Q
    |||||||||||||||||||| || | |||   || | |||||||  |||||  ||||||||| | || |||||||||||| ||| ||||||||||||    
T  7401903 tcaaattcgtccttgaatttgcacagatcaaccataatcgtcctccaatttatcgaaatatcaaattcgtccctgaatttaacagacgtccatcaaa 7401999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 233 - 293
Target Start/End: Complemental strand, 8423349 - 8423289
Alignment:
Q  233 aattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctc 293  Q
    |||| ||||||||||| ||||| |||||||||||  || ||||| ||||||| ||||||||    
T  8423349 aattatgcgaaatatcaatttaatccctgaatttatcagacgtcaatcaaaaaggtccctc 8423289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 476
Target Start/End: Complemental strand, 10243581 - 10243541
Alignment:
Q  436 ggcagcgacgctggtccgaagcggaaacacaacctagatcg 476  Q
    ||||| |||||||||| ||||||||||| ||||||||||||    
T  10243581 ggcagtgacgctggtctgaagcggaaactcaacctagatcg 10243541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 214 - 266
Target Start/End: Original strand, 33775445 - 33775497
Alignment:
Q  214 tcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    ||||||||  |||||||| |||| ||||||||||| ||||| |||||||||||    
T  33775445 tcggtcaacttcgtccttcaattatgcgaaatatcaatttaatccctgaattt 33775497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 111; Significance: 9e-56; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 180 - 358
Target Start/End: Original strand, 1266 - 1443
Alignment:
Q  180 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccat 279  Q
    ||||||||||||| |||||||||||||| |||||| ||| ||| |||||| ||||||||  |||||||||||||||||||||||||||||| ||||||||    
T  1266 taatacctcaaatccgtccttgaattttaaaaaattggttaaattcgtccatgaattttatgaaatatctatttagtccctgaattttacagacgtccat 1365  T
Q  280 caaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||||||| ||||||||||||||||||||||| ||| || ||| |||||||| ||||||||| ||||||||||    
T  1366 caaaatggtccctccgtccaaaagctccgttagtggtgatgacgtatcc-cttgcatgctgtgttgtcttgtacacgtg 1443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 105; Significance: 4e-52; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 179 - 358
Target Start/End: Original strand, 8264 - 8441
Alignment:
Q  179 ctaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcca 278  Q
    ||||||||||||||||||||||||||||| |||||| || |||| |||| |||||||||||| ||||||||||||||||||||||||||  | |||||||    
T  8264 ctaatacctcaaattcgtccttgaattttaaaaaattggccaaattcgttcttgaattttgcaaaatatctatttagtccctgaatttt--atacgtcca 8361  T
Q  279 tcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtacacgtg 358  Q
    |||||||||| | || ||||||||||| ||||||||||| ||| ||||||||||||| | ||||||||| ||||||||||    
T  8362 tcaaaatggtacatccgtccaaaagcttcgttagtggtgatgacgtgtcctcttgcaagatgtgttgtcttgtacacgtg 8441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 97; Significance: 2e-47; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 178 - 354
Target Start/End: Original strand, 3295 - 3471
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||||||||||||| ||||||||| |||  | |||| |||||||||||||||||| | ||||||||||||||||||| ||||||    
T  3295 actaatacctcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtcc 3394  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtaca 354  Q
    |||||| | ||||||| ||||||||| ||||||| | ||| ||||||| | ||||||||| | ||||||||||||||    
T  3395 atcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgtggcttcttgcatgctttgttgtcctgtaca 3471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 178 - 354
Target Start/End: Original strand, 4467 - 4643
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacaaacgtcc 277  Q
    |||||||||||||||||||||||||||||| ||||||||| |||  | |||| |||||||||||||||||| | ||||||||||||||||||| ||||||    
T  4467 actaatacctcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtcc 4566  T
Q  278 atcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtaca 354  Q
    |||||| | ||||||| ||||||||| ||||||| | ||| ||||||| | ||||||||| | ||||||||||||||    
T  4567 atcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgtggcttcttgcatgctttgttgtcctgtaca 4643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 14431 - 14343
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||||||||||||||||||| |||||||||  ||  |||||| |||||||||||||||||| | |||||||||||||||    
T  14431 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 14343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 1643 - 1555
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||| ||||||||||||||||||||| |||||||||||||| |||||| |||||||||  ||||| | |||||||||||||||||    
T  1643 actaatacatcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgaaaaatagcaatttagtccctgaattt 1555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 54346 - 54258
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||| | ||||||||||||| |||||||||||||  |||||| |||||||| ||||||||| | |||||||||||||||    
T  54346 actaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 54258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 255 - 358
Target Start/End: Original strand, 37282 - 37385
Alignment:
Q  255 gtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtaca 354  Q
    |||| ||||||||||| ||||| |||||||||||  |||  ||||||| |||||||| ||||| |||| |||| ||||| ||||||||||||||| ||||    
T  37282 gtccatgaattttacagacgtctatcaaaatggtttctccatccaaaaactccgttaatggtgatgatatgtcttcttgtatgttgtgttgtcctttaca 37381  T
Q  355 cgtg 358  Q
    ||||    
T  37382 cgtg 37385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 436272 - 436341
Alignment:
Q  184 acctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctattt 253  Q
    ||||||||||||| |||||||||||||||||| | |||| || ||| | |||||||||||||||||||||    
T  436272 acctcaaattcgttcttgaattttcaaaaatcagccaaattcatccataaattttgcgaaatatctattt 436341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 252 - 358
Target Start/End: Complemental strand, 36899 - 36793
Alignment:
Q  252 ttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgt 351  Q
    ||||||||||||||| ||||||||| |||||| | |||| || ||||||| || |||||||||||| |||  |||| || ||||||   ||||||| |||    
T  36899 ttagtccctgaatttaacaaacgtcaatcaaattagtccttccgtccaaatgcaccgttagtggtgctgagttgtcttcctgcatggcttgttgtcttgt 36800  T
Q  352 acacgtg 358  Q
    |||||||    
T  36799 acacgtg 36793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1712 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold1712
Description:

Target: scaffold1712; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 983 - 1071
Alignment:
Q  178 actaatacctcaaattcgtccttgaattttcaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 266  Q
    |||||||||||||| | ||||||||||||| |||||||||  ||  |||||| |||||| | ||||||||| |  ||||||||||||||    
T  983 actaatacctcaaaatagtccttgaattttgaaaaatcggcaaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattt 1071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 314
Target Start/End: Complemental strand, 30517 - 30458
Alignment:
Q  255 gtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtg 314  Q
    |||||||||||| ||||||||| |||||||| || | || ||||||| ||||||||||||    
T  30517 gtccctgaatttaacaaacgtcaatcaaaatagttcttccgtccaaatgctccgttagtg 30458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 358
Target Start/End: Original strand, 4537 - 4640
Alignment:
Q  255 gtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaagctccgttagtggtggtgatgtgtcctcttgcatgttgtgttgtcctgtaca 354  Q
    |||||||||||  |||||||||||||||||| |||| || ||||||| | || ||||||| || |||  |||| || ||||||   ||||||| ||||||    
T  4537 gtccctgaattcaacaaacgtccatcaaaatagtccttccgtccaaatgttctgttagtgttgctgagttgtcgtcctgcatggcttgttgtcttgtaca 4636  T
Q  355 cgtg 358  Q
    ||||    
T  4637 cgtg 4640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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