View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6046_low_36 (Length: 292)
Name: NF6046_low_36
Description: NF6046
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6046_low_36 |
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Alignment Details
Target: chr3 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 34258115 - 34258395
Alignment:
| Q |
1 |
ttcactttcttgttcattggatgtctgttgtattctgcgcgaacagctaaagatgttgaaagataacctctttggtgaattagaagtactaagaggaaca |
100 |
Q |
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| T |
34258115 |
ttcactttcttgttcattggatgtctgttgtattctgcgcgaacagctaaagatgttgaaagatgacctctttggtgaattagaagtactgagaggaaca |
34258214 |
T |
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| Q |
101 |
taaacgatcctcaactcaatgttgcaacccaacaagcactgcaaggaacttgctatcaatttccatgatttctcagccttggatacatggtggcgacgac |
200 |
Q |
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| T |
34258215 |
tcaatgatcctcaactcaatgttgcaacccaacaagcactgcaaggaacttgctatcaatttccatgatttctcagccttggatacatggtggcgacgac |
34258314 |
T |
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| Q |
201 |
cgaactccaactccacaatagcaagagctgaaaagtatagcattagtaccaagaattcaaactacagaatagatacttcat |
281 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
34258315 |
cgaactccaactccacaatagcaagagctgaaaagtatagcattagtaccaacaattcaaactacagaatagatacttcat |
34258395 |
T |
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