View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6046_low_40 (Length: 273)

Name: NF6046_low_40
Description: NF6046
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6046_low_40
NF6046_low_40
[»] chr2 (11 HSPs)
chr2 (16-249)||(130345-130582)
chr2 (146-238)||(9732872-9732963)
chr2 (146-238)||(35114842-35114933)
chr2 (208-238)||(41366113-41366143)
chr2 (210-238)||(12672479-12672507)
chr2 (210-238)||(27462807-27462835)
chr2 (210-238)||(32766509-32766537)
chr2 (210-238)||(37003873-37003901)
chr2 (210-238)||(37308712-37308740)
chr2 (210-238)||(40832474-40832502)
chr2 (210-238)||(42706416-42706444)
[»] chr4 (15 HSPs)
chr4 (146-238)||(47361349-47361439)
chr4 (193-238)||(22318364-22318410)
chr4 (208-238)||(7001912-7001942)
chr4 (208-238)||(39078721-39078751)
chr4 (201-238)||(28115312-28115349)
chr4 (210-238)||(6776638-6776666)
chr4 (210-238)||(16320579-16320607)
chr4 (210-238)||(23521940-23521968)
chr4 (210-238)||(29785535-29785563)
chr4 (210-238)||(33177030-33177058)
chr4 (210-238)||(37931980-37932008)
chr4 (210-238)||(38812580-38812608)
chr4 (210-238)||(49152098-49152126)
chr4 (210-238)||(50186588-50186616)
chr4 (210-238)||(55065331-55065359)
[»] scaffold0650 (1 HSPs)
scaffold0650 (146-238)||(1591-1682)
[»] chr6 (8 HSPs)
chr6 (146-238)||(18597139-18597230)
chr6 (201-238)||(14808036-14808073)
chr6 (210-238)||(166967-166995)
chr6 (210-238)||(3259740-3259768)
chr6 (210-238)||(10324155-10324183)
chr6 (210-238)||(11279185-11279213)
chr6 (210-238)||(31870144-31870172)
chr6 (210-238)||(34684027-34684055)
[»] chr8 (9 HSPs)
chr8 (208-238)||(15001523-15001553)
chr8 (146-238)||(29563183-29563274)
chr8 (210-238)||(6386633-6386661)
chr8 (210-238)||(8673075-8673103)
chr8 (210-238)||(29672343-29672371)
chr8 (210-238)||(30543042-30543070)
chr8 (210-238)||(32303605-32303633)
chr8 (210-238)||(37618412-37618440)
chr8 (210-238)||(39642940-39642968)
[»] chr3 (8 HSPs)
chr3 (146-238)||(21373988-21374079)
chr3 (210-238)||(21221359-21221387)
chr3 (210-238)||(28675848-28675876)
chr3 (210-238)||(29584933-29584961)
chr3 (210-238)||(34026725-34026753)
chr3 (210-238)||(49748910-49748938)
chr3 (210-238)||(51296639-51296667)
chr3 (210-238)||(51925207-51925235)
[»] chr1 (11 HSPs)
chr1 (208-238)||(6029379-6029409)
chr1 (146-238)||(6711063-6711154)
chr1 (208-238)||(13994153-13994183)
chr1 (146-238)||(32289361-32289452)
chr1 (146-238)||(45490892-45490983)
chr1 (146-238)||(51264561-51264652)
chr1 (210-238)||(1351515-1351543)
chr1 (210-238)||(1601239-1601267)
chr1 (210-238)||(16437428-16437456)
chr1 (210-238)||(25539921-25539949)
chr1 (210-238)||(42705318-42705346)
[»] chr5 (6 HSPs)
chr5 (201-238)||(5571646-5571683)
chr5 (210-238)||(4689709-4689737)
chr5 (210-238)||(5673196-5673224)
chr5 (210-238)||(8136894-8136922)
chr5 (210-238)||(32528772-32528800)
chr5 (210-238)||(41790473-41790501)
[»] scaffold0729 (1 HSPs)
scaffold0729 (210-238)||(4590-4618)
[»] scaffold0360 (1 HSPs)
scaffold0360 (210-238)||(15392-15420)
[»] scaffold0169 (2 HSPs)
scaffold0169 (210-238)||(12547-12575)
scaffold0169 (210-238)||(18065-18093)
[»] scaffold0155 (1 HSPs)
scaffold0155 (190-238)||(33535-33583)
[»] chr7 (9 HSPs)
chr7 (210-238)||(1870196-1870224)
chr7 (210-238)||(11250678-11250706)
chr7 (190-238)||(18386586-18386634)
chr7 (210-238)||(21784932-21784960)
chr7 (210-238)||(23349297-23349325)
chr7 (210-238)||(30849252-30849280)
chr7 (210-238)||(43189248-43189276)
chr7 (190-238)||(46408950-46408998)
chr7 (210-238)||(47316704-47316732)


Alignment Details
Target: chr2 (Bit Score: 143; Significance: 3e-75; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 16 - 249
Target Start/End: Complemental strand, 130582 - 130345
Alignment:
Q  16 acatcatcgtactcgtgtaaccgcaacatgccaaaaacata--ataaacggtttaacttgtaaaaaatttgggtgc-tttgatttgataaaaaacaagg- 111  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||     
T  130582 acatcatcgtactcgtgtaaccgcaacatgccaaaaacatataataaacggtttaacttgtaaagaatttgggtgcctttgatttgataaaaaataagga 130483  T
Q  112 gatgacataagaagttcagttcttcggtatttgatgatttgtaaaactgtttcaaagacaggacacaaatcagaggttagggacaagacaaaatttaaat 211  Q
    |||||||||||||||||||  |||| | ||||||| |||||||| |||| |||||| ||| ||||||||  ||||||||||||||  |||||| ||||||    
T  130482 gatgacataagaagttcagcacttcagaatttgataatttgtaatactgcttcaaaaacatgacacaaactagaggttagggacagaacaaaacttaaat 130383  T
Q  212 ttttgtccctcaccaaaccacaacacatttaatatttt 249  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  130382 ttttgtccctcaccaaaccacaacacaattaatatttt 130345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 238
Target Start/End: Original strand, 9732872 - 9732963
Alignment:
Q  146 tgatttgtaaaactgtttcaaagacaggacacaaatcagaggttagggacaagacaaaatttaa-atttttgtccctcaccaaaccacaacaca 238  Q
    ||||||||||||||||||||   ||||||||  ||   ||||  |||||||||||||||  | | |||||||||||||||||||||||||||||    
T  9732872 tgatttgtaaaactgtttcaggtacaggaca--aactggaggcaagggacaagacaaaaactcatatttttgtccctcaccaaaccacaacaca 9732963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 238
Target Start/End: Complemental strand, 35114933 - 35114842
Alignment:
Q  146 tgatttgtaaaactgtttcaaagacaggacacaaatcagaggttagggacaagacaaaatttaa-atttttgtccctcaccaaaccacaacaca 238  Q
    ||||||||||||||||||||   ||||||||  ||  |||||  ||||||| |||||||  | | |||||||||||||||||||||||||||||    
T  35114933 tgatttgtaaaactgtttcaggtacaggaca--aactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacaca 35114842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 238
Target Start/End: Original strand, 41366113 - 41366143
Alignment:
Q  208 aaatttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||||    
T  41366113 aaatttttgtccctcaccaaaccacaacaca 41366143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 12672479 - 12672507
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  12672479 atttttgtccctcaccaaaccacaacaca 12672507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 27462807 - 27462835
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  27462807 atttttgtccctcaccaaaccacaacaca 27462835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 32766509 - 32766537
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  32766509 atttttgtccctcaccaaaccacaacaca 32766537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 37003873 - 37003901
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  37003873 atttttgtccctcaccaaaccacaacaca 37003901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 37308740 - 37308712
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  37308740 atttttgtccctcaccaaaccacaacaca 37308712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 40832474 - 40832502
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  40832474 atttttgtccctcaccaaaccacaacaca 40832502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 42706444 - 42706416
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  42706444 atttttgtccctcaccaaaccacaacaca 42706416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 3e-17; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 146 - 238
Target Start/End: Original strand, 47361349 - 47361439
Alignment:
Q  146 tgatttgtaaaactgtttcaaagacaggacacaaatcagaggttagggacaagacaaaatttaaatttttgtccctcaccaaaccacaacaca 238  Q
    ||||||||||||||||||||   ||||||||  || | ||||  ||||||||||||||||| | |||||||||||||||||||||||||||||    
T  47361349 tgatttgtaaaactgtttcaggtacaggaca--aaccggaggcaagggacaagacaaaattcatatttttgtccctcaccaaaccacaacaca 47361439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 22318364 - 22318410
Alignment:
Q  193 gacaagacaaaattt-aaatttttgtccctcaccaaaccacaacaca 238  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||    
T  22318364 gacaggacaaaatttgaaatttttgtccctcaccaaaccacaacaca 22318410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 238
Target Start/End: Complemental strand, 7001942 - 7001912
Alignment:
Q  208 aaatttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||||    
T  7001942 aaatttttgtccctcaccaaaccacaacaca 7001912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 238
Target Start/End: Complemental strand, 39078751 - 39078721
Alignment:
Q  208 aaatttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||||    
T  39078751 aaatttttgtccctcaccaaaccacaacaca 39078721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 238
Target Start/End: Complemental strand, 28115349 - 28115312
Alignment:
Q  201 aaaatttaaatttttgtccctcaccaaaccacaacaca 238  Q
    |||||| | |||||||||||||||||||||||||||||    
T  28115349 aaaattgatatttttgtccctcaccaaaccacaacaca 28115312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 6776666 - 6776638
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  6776666 atttttgtccctcaccaaaccacaacaca 6776638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 16320607 - 16320579
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  16320607 atttttgtccctcaccaaaccacaacaca 16320579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 23521968 - 23521940
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  23521968 atttttgtccctcaccaaaccacaacaca 23521940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 29785535 - 29785563
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  29785535 atttttgtccctcaccaaaccacaacaca 29785563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 33177030 - 33177058
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  33177030 atttttgtccctcaccaaaccacaacaca 33177058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 37932008 - 37931980
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  37932008 atttttgtccctcaccaaaccacaacaca 37931980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 38812608 - 38812580
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  38812608 atttttgtccctcaccaaaccacaacaca 38812580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 49152098 - 49152126
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  49152098 atttttgtccctcaccaaaccacaacaca 49152126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 50186616 - 50186588
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  50186616 atttttgtccctcaccaaaccacaacaca 50186588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 55065331 - 55065359
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  55065331 atttttgtccctcaccaaaccacaacaca 55065359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 238
Target Start/End: Original strand, 1591 - 1682
Alignment:
Q  146 tgatttgtaaaactgtttcaaagacaggacacaaatcagaggttagggacaagacaaaattt-aaatttttgtccctcaccaaaccacaacaca 238  Q
    ||||||||||||||||||||| || ||||||  ||   ||||  |||||||||||||||  | |||||||||||||||||||||||||||||||    
T  1591 tgatttgtaaaactgtttcaaggataggaca--aactggaggcaagggacaagacaaaaactgaaatttttgtccctcaccaaaccacaacaca 1682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000001; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 238
Target Start/End: Original strand, 18597139 - 18597230
Alignment:
Q  146 tgatttgtaaaactgtttcaaagacaggacacaaatcagaggttagggacaagacaaaattt-aaatttttgtccctcaccaaaccacaacaca 238  Q
    ||||||||||||||||||||  || | ||||  || | ||||  ||||||| |||||||| | |||||||||||||||||||||||||||||||    
T  18597139 tgatttgtaaaactgtttcagggatatgaca--aaccggaggcaagggacatgacaaaatctgaaatttttgtccctcaccaaaccacaacaca 18597230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 238
Target Start/End: Original strand, 14808036 - 14808073
Alignment:
Q  201 aaaatttaaatttttgtccctcaccaaaccacaacaca 238  Q
    |||||| | |||||||||||||||||||||||||||||    
T  14808036 aaaattgatatttttgtccctcaccaaaccacaacaca 14808073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 166967 - 166995
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  166967 atttttgtccctcaccaaaccacaacaca 166995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 3259768 - 3259740
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  3259768 atttttgtccctcaccaaaccacaacaca 3259740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 10324155 - 10324183
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  10324155 atttttgtccctcaccaaaccacaacaca 10324183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 11279213 - 11279185
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  11279213 atttttgtccctcaccaaaccacaacaca 11279185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 31870144 - 31870172
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  31870144 atttttgtccctcaccaaaccacaacaca 31870172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 34684027 - 34684055
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  34684027 atttttgtccctcaccaaaccacaacaca 34684055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 31; Significance: 0.00000002; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 238
Target Start/End: Complemental strand, 15001553 - 15001523
Alignment:
Q  208 aaatttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||||    
T  15001553 aaatttttgtccctcaccaaaccacaacaca 15001523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 238
Target Start/End: Original strand, 29563183 - 29563274
Alignment:
Q  146 tgatttgtaaaactgtttcaaagacaggacacaaatcagaggttagggacaagacaaaatttaa-atttttgtccctcaccaaaccacaacaca 238  Q
    ||||||||||||||||||||   |||||||| || || ||||  ||||||| |||||||  | | |||||||||||||||||||||||||||||    
T  29563183 tgatttgtaaaactgtttcaggtacaggaca-aactc-gaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacaca 29563274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 6386661 - 6386633
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  6386661 atttttgtccctcaccaaaccacaacaca 6386633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 8673075 - 8673103
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  8673075 atttttgtccctcaccaaaccacaacaca 8673103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 29672343 - 29672371
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  29672343 atttttgtccctcaccaaaccacaacaca 29672371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 30543042 - 30543070
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  30543042 atttttgtccctcaccaaaccacaacaca 30543070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 32303605 - 32303633
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  32303605 atttttgtccctcaccaaaccacaacaca 32303633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 37618412 - 37618440
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  37618412 atttttgtccctcaccaaaccacaacaca 37618440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 39642968 - 39642940
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  39642968 atttttgtccctcaccaaaccacaacaca 39642940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 31; Significance: 0.00000002; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 238
Target Start/End: Complemental strand, 21374079 - 21373988
Alignment:
Q  146 tgatttgtaaaactgtttcaaagacaggacacaaatcagaggttagggacaagacaaaatttaa-atttttgtccctcaccaaaccacaacaca 238  Q
    ||||||||||||||||||||   |||||||| |  |  ||||  ||||||| |||||||| | | |||||||||||||||||||||||||||||    
T  21374079 tgatttgtaaaactgtttcaggtacaggacaaactt--gaggcaagggacaggacaaaatctcatatttttgtccctcaccaaaccacaacaca 21373988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 21221359 - 21221387
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  21221359 atttttgtccctcaccaaaccacaacaca 21221387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 28675876 - 28675848
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  28675876 atttttgtccctcaccaaaccacaacaca 28675848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 29584961 - 29584933
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  29584961 atttttgtccctcaccaaaccacaacaca 29584933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 34026753 - 34026725
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  34026753 atttttgtccctcaccaaaccacaacaca 34026725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 49748910 - 49748938
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  49748910 atttttgtccctcaccaaaccacaacaca 49748938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 51296667 - 51296639
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  51296667 atttttgtccctcaccaaaccacaacaca 51296639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 51925207 - 51925235
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  51925207 atttttgtccctcaccaaaccacaacaca 51925235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 31; Significance: 0.00000002; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 238
Target Start/End: Original strand, 6029379 - 6029409
Alignment:
Q  208 aaatttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||||    
T  6029379 aaatttttgtccctcaccaaaccacaacaca 6029409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 238
Target Start/End: Original strand, 6711063 - 6711154
Alignment:
Q  146 tgatttgtaaaactgtttcaaagacaggacacaaatcagaggttagggacaagacaaaatttaa-atttttgtccctcaccaaaccacaacaca 238  Q
    ||||||||||||||||||||   ||||||||  ||  |||||  ||||||| |||||||  | | |||||||||||||||||||||||||||||    
T  6711063 tgatttgtaaaactgtttcaggtacaggaca--aactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacaca 6711154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 238
Target Start/End: Original strand, 13994153 - 13994183
Alignment:
Q  208 aaatttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||||    
T  13994153 aaatttttgtccctcaccaaaccacaacaca 13994183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 238
Target Start/End: Original strand, 32289361 - 32289452
Alignment:
Q  146 tgatttgtaaaactgtttcaaagacaggacacaaatcagaggttagggacaagacaaaatttaa-atttttgtccctcaccaaaccacaacaca 238  Q
    ||||||||||||||||||||   ||||||||  |||  ||||  |||||||||||||||  | | |||||||||||||||||||||||| ||||    
T  32289361 tgatttgtaaaactgtttcaggtacaggaca--aattggaggcaagggacaagacaaaaactcatatttttgtccctcaccaaaccacagcaca 32289452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 238
Target Start/End: Original strand, 45490892 - 45490983
Alignment:
Q  146 tgatttgtaaaactgtttcaaagacaggacacaaatcagaggttagggacaagacaaaatttaa-atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||  ||||||||  ||   ||||  ||||||| |||||||  | | |||||||||||||||||||||||||||||    
T  45490892 tgatttgtaaaactgtttcaagtacaggaca--aactggaggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacaacaca 45490983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 238
Target Start/End: Complemental strand, 51264652 - 51264561
Alignment:
Q  146 tgatttgtaaaactgtttcaaagacaggacacaaatcagaggttagggacaagacaaaatttaa-atttttgtccctcaccaaaccacaacaca 238  Q
    ||||||||||||||||||||   ||||||||  ||   ||||  |||||||||||||||  | | |||||||||||||||||||||||||||||    
T  51264652 tgatttgtaaaactgtttcaggtacaggaca--aactggaggcaagggacaagacaaaaactcatatttttgtccctcaccaaaccacaacaca 51264561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 1351515 - 1351543
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  1351515 atttttgtccctcaccaaaccacaacaca 1351543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 1601267 - 1601239
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  1601267 atttttgtccctcaccaaaccacaacaca 1601239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 16437456 - 16437428
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  16437456 atttttgtccctcaccaaaccacaacaca 16437428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 25539949 - 25539921
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  25539949 atttttgtccctcaccaaaccacaacaca 25539921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 42705318 - 42705346
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  42705318 atttttgtccctcaccaaaccacaacaca 42705346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 30; Significance: 0.00000009; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 238
Target Start/End: Original strand, 5571646 - 5571683
Alignment:
Q  201 aaaatttaaatttttgtccctcaccaaaccacaacaca 238  Q
    |||||| | |||||||||||||||||||||||||||||    
T  5571646 aaaattcatatttttgtccctcaccaaaccacaacaca 5571683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 4689709 - 4689737
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  4689709 atttttgtccctcaccaaaccacaacaca 4689737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 5673224 - 5673196
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  5673224 atttttgtccctcaccaaaccacaacaca 5673196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 8136922 - 8136894
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  8136922 atttttgtccctcaccaaaccacaacaca 8136894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 32528800 - 32528772
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  32528800 atttttgtccctcaccaaaccacaacaca 32528772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 41790473 - 41790501
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  41790473 atttttgtccctcaccaaaccacaacaca 41790501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 4590 - 4618
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  4590 atttttgtccctcaccaaaccacaacaca 4618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 15392 - 15420
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  15392 atttttgtccctcaccaaaccacaacaca 15420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 12547 - 12575
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  12547 atttttgtccctcaccaaaccacaacaca 12575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 18065 - 18093
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  18065 atttttgtccctcaccaaaccacaacaca 18093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 238
Target Start/End: Original strand, 33535 - 33583
Alignment:
Q  190 agggacaagacaaaatttaaatttttgtccctcaccaaaccacaacaca 238  Q
    ||||||| ||||||| | ||||| |||||||||| ||||||||||||||    
T  33535 agggacatgacaaaaatgaaattcttgtccctcatcaaaccacaacaca 33583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 29; Significance: 0.0000004; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 1870224 - 1870196
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  1870224 atttttgtccctcaccaaaccacaacaca 1870196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 11250706 - 11250678
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  11250706 atttttgtccctcaccaaaccacaacaca 11250678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 18386634 - 18386586
Alignment:
Q  190 agggacaagacaaaatttaaatttttgtccctcaccaaaccacaacaca 238  Q
    ||||||| ||||||| | | |||||||||||||||||||||||| ||||    
T  18386634 agggacaggacaaaactcatatttttgtccctcaccaaaccacagcaca 18386586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 21784960 - 21784932
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  21784960 atttttgtccctcaccaaaccacaacaca 21784932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 23349297 - 23349325
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  23349297 atttttgtccctcaccaaaccacaacaca 23349325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 30849252 - 30849280
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  30849252 atttttgtccctcaccaaaccacaacaca 30849280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 43189248 - 43189276
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  43189248 atttttgtccctcaccaaaccacaacaca 43189276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 46408998 - 46408950
Alignment:
Q  190 agggacaagacaaaatttaaatttttgtccctcaccaaaccacaacaca 238  Q
    ||||||| ||||||| | | |||||||||||||||||||||||| ||||    
T  46408998 agggacaggacaaaactcatatttttgtccctcaccaaaccacagcaca 46408950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 47316704 - 47316732
Alignment:
Q  210 atttttgtccctcaccaaaccacaacaca 238  Q
    |||||||||||||||||||||||||||||    
T  47316704 atttttgtccctcaccaaaccacaacaca 47316732  T

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