View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6051_high_11 (Length: 353)
Name: NF6051_high_11
Description: NF6051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6051_high_11 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 322; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 8 - 353
Target Start/End: Original strand, 32684166 - 32684511
Alignment:
| Q |
8 |
ccaagaaaatatagatccaaaatatgacaaaatttgcagaagttgatggatacgaagtttgggtgtccatcaagtgcataataaaaatacaacaacaata |
107 |
Q |
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| T |
32684166 |
ccaaaaaaatatagatccaaaatatgacaaagtttgcacaagttgatggatacgaagtttgggtgtccatcaagtgcataataaaaatacaacaacaata |
32684265 |
T |
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| Q |
108 |
tatgaattatgtccaaaataaaattattcaggaaggaaacaggcacgaataaaatgatatgcatgcatgaagaaatcatagattccaagggatttattct |
207 |
Q |
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| T |
32684266 |
tatgaattatgtccaaaataaaattattcaggaaggaaacaggcacgaataaaatgatatgcatgcatgaagaaatcatagattccatgggatttattct |
32684365 |
T |
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| Q |
208 |
tctctccatccgttaaagcttctactttgcaaatagggcaaatattttttatcatcagccattttattatgcagtcaacgtgatatccatgcttgcatcg |
307 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
32684366 |
tctctccatccgttaaagcttctaatttgcaaatagggcaaatattttttatcatcagccattttattatgcagtcaacgtgatatccatgcttgcattg |
32684465 |
T |
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| Q |
308 |
aagaattccaatcttctcttgaatcttaaattcttcctattcaagc |
353 |
Q |
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| T |
32684466 |
aagaattccaatcttctcttgaatcttaaattcttcctattcaagc |
32684511 |
T |
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