View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6051_low_10 (Length: 365)

Name: NF6051_low_10
Description: NF6051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6051_low_10
NF6051_low_10
[»] chr1 (19 HSPs)
chr1 (1-365)||(29099531-29099894)
chr1 (3-174)||(15495877-15496048)
chr1 (1-174)||(14351048-14351220)
chr1 (1-82)||(11814698-11814779)
chr1 (1-113)||(2077418-2077529)
chr1 (1-82)||(26842049-26842129)
chr1 (74-166)||(26842000-26842092)
chr1 (291-365)||(2509028-2509102)
chr1 (291-365)||(34307251-34307325)
chr1 (291-365)||(39249976-39250050)
chr1 (1-66)||(8039195-8039259)
chr1 (293-365)||(19258785-19258857)
chr1 (118-177)||(10494882-10494941)
chr1 (102-173)||(26236753-26236824)
chr1 (291-365)||(46901848-46901922)
chr1 (1-85)||(615639-615723)
chr1 (292-364)||(10146971-10147043)
chr1 (1-84)||(34654837-34654920)
chr1 (1-47)||(39709190-39709236)
[»] chr2 (22 HSPs)
chr2 (3-176)||(6705509-6705682)
chr2 (34-177)||(40900224-40900367)
chr2 (1-129)||(14950753-14950881)
chr2 (22-177)||(38531278-38531433)
chr2 (1-113)||(9910629-9910740)
chr2 (23-124)||(28164837-28164938)
chr2 (291-365)||(33732573-33732647)
chr2 (291-365)||(36315565-36315639)
chr2 (291-365)||(44958117-44958191)
chr2 (1-85)||(4869514-4869598)
chr2 (293-365)||(37914349-37914421)
chr2 (291-365)||(37498978-37499052)
chr2 (1-174)||(1551698-1551861)
chr2 (291-365)||(16089826-16089900)
chr2 (96-172)||(3921536-3921612)
chr2 (293-357)||(6376354-6376418)
chr2 (3-173)||(17282046-17282206)
chr2 (292-365)||(3831010-3831081)
chr2 (291-365)||(14572999-14573073)
chr2 (20-66)||(27888778-27888824)
chr2 (96-169)||(34660230-34660303)
chr2 (93-173)||(1895351-1895431)
[»] chr5 (29 HSPs)
chr5 (3-173)||(40680874-40681044)
chr5 (1-174)||(26331090-26331263)
chr5 (1-124)||(12156361-12156484)
chr5 (1-152)||(24867100-24867251)
chr5 (1-114)||(34574162-34574274)
chr5 (1-85)||(27170243-27170327)
chr5 (12-113)||(42268836-42268936)
chr5 (291-365)||(40888055-40888129)
chr5 (1-66)||(40599972-40600037)
chr5 (291-365)||(1815729-1815803)
chr5 (291-365)||(9408152-9408226)
chr5 (291-365)||(33404549-33404623)
chr5 (291-365)||(39370931-39371005)
chr5 (1-165)||(26656637-26656790)
chr5 (1-165)||(26928224-26928377)
chr5 (293-365)||(2237282-2237354)
chr5 (293-365)||(13347134-13347206)
chr5 (291-365)||(4300656-4300730)
chr5 (4-78)||(7271718-7271792)
chr5 (291-365)||(12164255-12164329)
chr5 (291-365)||(27553486-27553560)
chr5 (1-165)||(41355620-41355774)
chr5 (21-85)||(6030500-6030564)
chr5 (293-365)||(19596180-19596252)
chr5 (1-57)||(42221394-42221450)
chr5 (106-169)||(7271788-7271851)
chr5 (302-365)||(14831559-14831622)
chr5 (322-365)||(17225352-17225395)
chr5 (296-362)||(41003965-41004031)
[»] chr4 (22 HSPs)
chr4 (1-173)||(45873108-45873280)
chr4 (7-174)||(55728704-55728871)
chr4 (9-124)||(42677627-42677742)
chr4 (1-114)||(12130520-12130633)
chr4 (1-172)||(38093221-38093393)
chr4 (291-362)||(21391071-21391142)
chr4 (291-365)||(28093209-28093283)
chr4 (291-365)||(45829370-45829444)
chr4 (291-365)||(46192363-46192437)
chr4 (291-365)||(49243819-49243893)
chr4 (1-54)||(14441121-14441174)
chr4 (1-173)||(47518552-47518714)
chr4 (291-365)||(3672278-3672352)
chr4 (291-365)||(6112634-6112708)
chr4 (291-365)||(7217769-7217843)
chr4 (1-85)||(34227172-34227256)
chr4 (291-362)||(44275710-44275781)
chr4 (96-169)||(23054338-23054411)
chr4 (22-166)||(24957685-24957819)
chr4 (291-331)||(43245522-43245562)
chr4 (1-128)||(53202125-53202241)
chr4 (1-75)||(12489182-12489256)
[»] chr7 (23 HSPs)
chr7 (1-178)||(21590510-21590688)
chr7 (1-124)||(31039006-31039129)
chr7 (12-118)||(24718022-24718127)
chr7 (291-365)||(7699996-7700070)
chr7 (291-365)||(7700194-7700268)
chr7 (291-365)||(7700392-7700466)
chr7 (291-365)||(7700590-7700664)
chr7 (291-365)||(36346677-36346751)
chr7 (1-85)||(3302434-3302518)
chr7 (293-365)||(23980137-23980209)
chr7 (1-113)||(43047689-43047800)
chr7 (293-363)||(13108154-13108224)
chr7 (291-365)||(42221076-42221150)
chr7 (293-365)||(31148296-31148368)
chr7 (291-365)||(26972316-26972390)
chr7 (291-365)||(28307608-28307682)
chr7 (291-365)||(34108430-34108504)
chr7 (293-365)||(5811276-5811348)
chr7 (291-362)||(21807438-21807509)
chr7 (291-365)||(30887704-30887778)
chr7 (292-365)||(38321014-38321087)
chr7 (1-66)||(10365746-10365810)
chr7 (5-61)||(36582839-36582894)
[»] chr6 (10 HSPs)
chr6 (1-122)||(32747641-32747762)
chr6 (293-365)||(14022940-14023012)
chr6 (291-365)||(3118160-3118234)
chr6 (291-365)||(3987018-3987092)
chr6 (293-365)||(24208450-24208522)
chr6 (291-365)||(13697573-13697646)
chr6 (32-111)||(30845463-30845542)
chr6 (1-61)||(9566802-9566861)
chr6 (1-59)||(11366698-11366755)
chr6 (96-164)||(21881411-21881479)
[»] chr8 (18 HSPs)
chr8 (1-85)||(15050124-15050208)
chr8 (1-124)||(25142908-25143031)
chr8 (291-365)||(12665348-12665422)
chr8 (5-75)||(23635861-23635931)
chr8 (74-174)||(15050070-15050170)
chr8 (291-365)||(30432343-30432417)
chr8 (12-81)||(5515298-5515367)
chr8 (291-362)||(36189220-36189291)
chr8 (291-365)||(44081784-44081858)
chr8 (1-85)||(5994491-5994575)
chr8 (5-85)||(10408713-10408793)
chr8 (293-365)||(33726017-33726089)
chr8 (291-365)||(42162602-42162676)
chr8 (31-174)||(6443925-6444057)
chr8 (8-56)||(23635816-23635864)
chr8 (1-44)||(3763043-3763086)
chr8 (291-362)||(10203668-10203739)
chr8 (291-365)||(43186031-43186105)
[»] chr3 (21 HSPs)
chr3 (1-111)||(31699224-31699333)
chr3 (237-290)||(37067076-37067129)
chr3 (291-362)||(21559565-21559636)
chr3 (291-365)||(38231297-38231371)
chr3 (291-365)||(46112057-46112131)
chr3 (291-365)||(22894684-22894758)
chr3 (291-365)||(29460664-29460738)
chr3 (291-365)||(29471516-29471590)
chr3 (291-365)||(36749410-36749484)
chr3 (1-85)||(18269875-18269959)
chr3 (293-365)||(39072386-39072458)
chr3 (291-365)||(30735608-30735682)
chr3 (291-365)||(34750011-34750085)
chr3 (291-365)||(36370451-36370525)
chr3 (291-365)||(43999993-44000067)
chr3 (293-362)||(39467217-39467286)
chr3 (295-365)||(20856264-20856334)
chr3 (1-167)||(43275837-43275994)
chr3 (291-365)||(51339896-51339968)
chr3 (118-176)||(31699315-31699373)
chr3 (117-173)||(18269807-18269863)
[»] scaffold0092 (1 HSPs)
scaffold0092 (101-177)||(23272-23348)
[»] scaffold0062 (1 HSPs)
scaffold0062 (291-365)||(6722-6796)
[»] scaffold0027 (1 HSPs)
scaffold0027 (1-79)||(2944-3021)
[»] scaffold0043 (1 HSPs)
scaffold0043 (291-365)||(87277-87350)
[»] scaffold0157 (1 HSPs)
scaffold0157 (1-75)||(31221-31295)
[»] scaffold0044 (1 HSPs)
scaffold0044 (66-152)||(42826-42912)
[»] scaffold0725 (1 HSPs)
scaffold0725 (20-61)||(1080-1121)
[»] scaffold0088 (1 HSPs)
scaffold0088 (20-61)||(26996-27037)


Alignment Details
Target: chr1 (Bit Score: 301; Significance: 1e-169; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 1 - 365
Target Start/End: Original strand, 29099531 - 29099894
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccaca 100  Q
    |||| |||||||||||| ||||||||| ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29099531 aacttccattaaccaccacaaaaaccatcgttaatactcaccaaaaactagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccaca 29099630  T
Q  101 agcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccaccacaaaagacccagtgtcagaaaataact 200  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  29099631 agcatcaccaccaagaaccaccacgagcaccaccacagaagacccagtatcagcaccaccatggaaaccaccacaaaagacccagtgtcagaaaataact 29099730  T
Q  201 cttgaggagagttacgttataactccaagctggcggaccccaaccataattcttgcaaagtaacccatgttttgtagctcgagctggcggtcttatacat 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29099731 cttgaggagagttacgttataactccaagctggcggaccccaaccataattcttgcaaagtaactcatgttttgtagctcgagctggcggtcttatacat 29099830  T
Q  301 aaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||| |||||||| ||||||||| ||||||  ||||||||||||||||||||| |||||||||    
T  29099831 aaaccaccttagatggcatacactc-tttacgtccacacacatttgtgacatgtgacaaaaacat 29099894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 3 - 174
Target Start/End: Original strand, 15495877 - 15496048
Alignment:
Q  3 ctaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaag 102  Q
    |||| ||||||||||   ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| || |||| ||    
T  15495877 ctactattaaccaccaagaaaaccaccattaatcctcaccaaaaaccagcaccagccaccacgagcatcaccaccaaaaaacaacatcagccaccacgag 15495976  T
Q  103 catcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccaccac 174  Q
    |||||||||||| |||||||||||||| || |||| |||||| |||||||||||||||||||||||||||||    
T  15495977 catcaccaccaaaaaccaccacgagcaccaccacaaaagaccaagtatcagcaccaccatgaaaaccaccac 15496048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 14351220 - 14351048
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccaca 100  Q
    |||||||| |||||||| ||||||||||| ||||| |||||||||||||||||||| |||| || |||||||||||||||||| |||| || || ||||     
T  14351220 aactaccactaaccaccacaaaaaccaccattaattctcaccaaaaaccagcaccaaccaccactagcatcaccaccaaaaactaacaccagccaccacg 14351121  T
Q  101 agcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccaccac 174  Q
    ||||||||||  || |||||||||||| | || |||| || | ||| ||||| ||||| |||||||||||||||    
T  14351120 agcatcaccataaaaaaccaccacgagaaccaccacaaaaaatccaatatcaacacca-catgaaaaccaccac 14351048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 11814698 - 11814779
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaa 82  Q
    ||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  11814698 aactaccattaaccatcacaaaaaccaccattaatcctcaccaaaaaccagcaccagccaccatgagcatcaccaccaaaaa 11814779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 2077529 - 2077418
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccaca 100  Q
    ||||| ||||||||||| ||||||||||| ||||||||||||||||| | | ||||||||| ||||||||||||| |||||| ||||| || || |||      
T  2077529 aactatcattaaccaccacaaaaaccaccattaatcctcaccaaaaatcggtaccagccaccacgagcatcacca-caaaaatcaacaccagccaccatg 2077431  T
Q  101 agcatcaccacca 113  Q
    |||||||||||||    
T  2077430 agcatcaccacca 2077418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 26842129 - 26842049
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaa 82  Q
    ||||||||||||||||| ||||| | ||| |||||||||||||||||||| |||||||||| |||||||||| |||||||||    
T  26842129 aactaccattaaccaccacaaaa-caaccattaatcctcaccaaaaaccaacaccagccaccacgagcatcaacaccaaaaa 26842049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 74 - 166
Target Start/End: Complemental strand, 26842092 - 26842000
Alignment:
Q  74 caccaaaaaccaacatcatccgccacaagcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaa 166  Q
    ||||||||||||||| || || |||| ||||||| |||||| || ||||||||||| || |||| |||||||||||||| |||||||||||||    
T  26842092 caccaaaaaccaacaccagccaccacgagcatcaacaccaaaaatcaccacgagcaccaccacaaaagacccagtatcaacaccaccatgaaa 26842000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 2509028 - 2509102
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| ||||| ||||| |||||||||  ||||||| | ||||||||||||||||| |||||||||||||    
T  2509028 tcttatacatgaaccaccttaggtgacatacatccttttacacccacacacatttgtgacacgtggcaaaaacat 2509102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 291 - 365
Target Start/End: Complemental strand, 34307325 - 34307251
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||||||||| ||||| || ||||||| |||||||   ||||||||||||||||| |||||||||||||    
T  34307325 tcttatacataaaccaccttaggtggcatacacccttttacatccacacacatttgtgacacgtggcaaaaacat 34307251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 291 - 365
Target Start/End: Complemental strand, 39250050 - 39249976
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| ||||||||||| || ||||||| ||||||| | || |||||||||||||| |||||||||||||    
T  39250050 tcttatacatgaaccatcttaggtggcatacacccttttacacccatacacatttgtgacacgtggcaaaaacat 39249976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 8039195 - 8039259
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacga 66  Q
    |||||||||||||||||  ||||||||||  |||||||||||||||||||||| ||||||| ||||    
T  8039195 aactaccattaaccacca-aaaaaccaccagtaatcctcaccaaaaaccagcatcagccaccacga 8039259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 293 - 365
Target Start/End: Complemental strand, 19258857 - 19258785
Alignment:
Q  293 ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    ||||||||||||||||| || || |||||||  |||||| | |||| | ||||||||||||||||||||||||    
T  19258857 ttatacataaaccatctaaggtggcatacacctttttacacccacatatatttgtgacatgtggcaaaaacat 19258785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 10494882 - 10494941
Alignment:
Q  118 ccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccaccacaaa 177  Q
    |||||||||||| || |||| |||||||| ||||| ||||||||||||||||| ||||||    
T  10494882 ccaccacgagcaccaacacaaaagacccaatatcaacaccaccatgaaaaccatcacaaa 10494941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 173
Target Start/End: Complemental strand, 26236824 - 26236753
Alignment:
Q  102 gcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccacca 173  Q
    |||||||||| || |||||||||||||| || |||| ||||| ||  |||||||||| ||||||||||||||    
T  26236824 gcatcaccactaaaaaccaccacgagcaccaccacaaaagactcaaaatcagcaccatcatgaaaaccacca 26236753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 365
Target Start/End: Complemental strand, 46901922 - 46901848
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| ||||| ||||| ||||||||||  |||||| |  ||||| |||||||||| |||||||||||||    
T  46901922 tcttatacatgaaccaccttaggtgacatacaccattttacaccaacacatatttgtgacacgtggcaaaaacat 46901848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 615639 - 615723
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaacca 85  Q
    |||||||||| ||| || |||||  |||| |||| | |||| ||||| || |||||||||| ||| |||||||||||||||||||    
T  615639 aactaccattgaccgccacaaaaggcaccattaaccatcactaaaaagcaacaccagccaccacgcgcatcaccaccaaaaacca 615723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 364
Target Start/End: Original strand, 10146971 - 10147043
Alignment:
Q  292 cttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaaca 364  Q
    |||||||||  |||| ||||| || ||||||| |||| || | |||||||| |||||||||||||||||||||    
T  10146971 cttatacatggaccaccttaggtggcatacaccctttgacccccacacacaattgtgacatgtggcaaaaaca 10147043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 34654837 - 34654920
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaacc 84  Q
    |||||||||| |||||| |||||| |||| |||| ||||||| |||| || ||| |||||| ||  ||| ||||||||||||||    
T  34654837 aactaccattgaccaccacaaaaatcaccattaaccctcacctaaaagcaacacaagccaccacacgcagcaccaccaaaaacc 34654920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 39709236 - 39709190
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaa 47  Q
    ||||||||||||||||| |||||| |||| |||| ||||||||||||    
T  39709236 aactaccattaaccaccacaaaaatcaccattaaccctcaccaaaaa 39709190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 6e-53; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 3 - 176
Target Start/End: Original strand, 6705509 - 6705682
Alignment:
Q  3 ctaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaag 102  Q
    ||||||||||||| | | ||||||||| |||||||||||||||||||| ||||| |||| |||||||||||||||||||| ||||| || || |||| ||    
T  6705509 ctaccattaaccaacacgaaaaccaccattaatcctcaccaaaaaccaacaccaaccaccacgagcatcaccaccaaaaaacaacaccagccaccacgag 6705608  T
Q  103 catcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccaccacaa 176  Q
    |||||||||||| |||||||||||||| || |||| |||||| |||||||||||||||||||||||||||||||    
T  6705609 catcaccaccaaaaaccaccacgagcaccaccacaaaagaccaagtatcagcaccaccatgaaaaccaccacaa 6705682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 34 - 177
Target Start/End: Original strand, 40900224 - 40900367
Alignment:
Q  34 atcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccaccaagaaccaccacgagcatcat 133  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||  || |||  || ||||||||||| | |||||||||||| ||     
T  40900224 atcctcaccaaaaaccagcaccagccaccacgagcatcaccacaaaaaaccagcatctgccaccatgagtatcaccaccaaaagccaccacgagcaccac 40900323  T
Q  134 cacagaagacccagtatcagcaccaccatgaaaaccaccacaaa 177  Q
    |||| ||||||||||||||||||||||||  |||||||||||||    
T  40900324 cacaaaagacccagtatcagcaccaccatagaaaccaccacaaa 40900367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 14950881 - 14950753
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccaca 100  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||| ||  ||||||||| || |||||||||||||||||  |||| || |||||||     
T  14950881 aactaccattaaccaccacaaaaaccaccattaatcctcaccaaaaatcaataccagccaccactagcatcaccaccaaaaaataacaccagccgccacg 14950782  T
Q  101 agcatcaccaccaagaaccaccacgagca 129  Q
    |||||||||||||| || |||||| ||||    
T  14950781 agcatcaccaccaaaaatcaccacaagca 14950753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 22 - 177
Target Start/End: Complemental strand, 38531433 - 38531278
Alignment:
Q  22 aaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccaccaagaaccac 121  Q
    |||||| | ||||||||||| |||||||||||||| |||| || |||||||| ||||||||| |||| || || |||| || |||||| |||| || |||    
T  38531433 aaaccatcattaatcctcacaaaaaaccagcaccatccaccactagcatcacaaccaaaaactaacaccagccaccacgagtatcaccgccaaaaatcac 38531334  T
Q  122 cacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccaccacaaa 177  Q
    |||||||| || |||| || |||||||||||||||||||||| ||| |||||||||    
T  38531333 cacgagcaccaccacaaaaaacccagtatcagcaccaccatggaaaacaccacaaa 38531278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 9910629 - 9910740
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccaca 100  Q
    ||||||||||||||||| ||||||||||  |||||||| |||||||| || |||||||||| ||||| ||||||| |||||||||||| || || ||||     
T  9910629 aactaccattaaccaccacaaaaaccacaattaatccttaccaaaaatcaacaccagccaccacgagtatcacca-caaaaaccaacaccaaccaccacg 9910727  T
Q  101 agcatcaccacca 113  Q
    |||||||||||||    
T  9910728 agcatcaccacca 9910740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 23 - 124
Target Start/End: Complemental strand, 28164938 - 28164837
Alignment:
Q  23 aaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccaccaagaaccacc 122  Q
    ||||||| ||| |||||||| |||| ||||||||||||| ||||| |||||||||||||||||||| || || |||  |||||||||||||| |||||||    
T  28164938 aaccaccattactcctcaccgaaaatcagcaccagccaccacgagtatcaccaccaaaaaccaacaccaaccaccatgagcatcaccaccaaaaaccacc 28164839  T
Q  123 ac 124  Q
    ||    
T  28164838 ac 28164837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 33732573 - 33732647
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| ||||| ||||| || ||||||| ||||||| | |||||||||||||||||||||||||||||||    
T  33732573 tcttatacatgaaccaccttaggtggcatacacccttttacacccacacacatttgtgacatgtggcaaaaacat 33732647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 36315565 - 36315639
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| ||||| ||||| || ||||||| ||||||| | |||||||||||||||||||||||||||||||    
T  36315565 tcttatacatgaaccaccttaggtggcatacacccttttacacccacacacatttgtgacatgtggcaaaaacat 36315639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 44958117 - 44958191
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| ||||| ||||| || ||||||| ||||||| | |||||||||||||||||||||||||||||||    
T  44958117 tcttatacatgaaccaccttaggtggcatacacccttttacacccacacacatttgtgacatgtggcaaaaacat 44958191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 4869514 - 4869598
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaacca 85  Q
    |||||||||| |||||| ||||||||||| |||| | |||| ||||| || |||||||||| ||| |||||||||||||||||||    
T  4869514 aactaccattgaccaccacaaaaaccaccattaaccatcactaaaaagcaacaccagccaccacgcgcatcaccaccaaaaacca 4869598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 293 - 365
Target Start/End: Complemental strand, 37914421 - 37914349
Alignment:
Q  293 ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||||||| ||||| || ||||||| |||||||   |||||||||||||||||||||||||||||||    
T  37914421 ttatacataaaccaccttaggtggcatacacccttttacatccacacacatttgtgacatgtggcaaaaacat 37914349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 291 - 365
Target Start/End: Complemental strand, 37499052 - 37498978
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    ||||||| || ||||||||||  || ||||||  ||||||| |||||||||||||||||||||||||||||||||    
T  37499052 tcttatatatcaaccatcttaactggcatacatccttttacactcacacacatttgtgacatgtggcaaaaacat 37498978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 1551861 - 1551698
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccaca 100  Q
    |||||||||| |||||| |||||| |||| |||| ||||||| |||| || |||||||||| ||| ||| ||||| | |||||||          |||||    
T  1551861 aactaccattgaccacctcaaaaatcaccattaaccctcacctaaaagcaacaccagccaccacgcgcagcaccatccaaaacca----------ccaca 1551772  T
Q  101 agcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccaccac 174  Q
    |||||||||||| | |||||||||||||  |  |||  ||||||||  |||||||| |||| ||||||||||||    
T  1551771 agcatcaccacccaaaaccaccacgagccccgccactaaagacccaaaatcagcactaccaagaaaaccaccac 1551698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 16089826 - 16089900
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| ||||| ||||  || ||||||| ||||||| | ||||||||||||||||| |||||||||||||    
T  16089826 tcttatacatgaaccaccttaagtggcatacacccttttacacccacacacatttgtgacacgtggcaaaaacat 16089900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 96 - 172
Target Start/End: Original strand, 3921536 - 3921612
Alignment:
Q  96 ccacaagcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccacc 172  Q
    ||||||||||||||||||| |||||||||||||  |  |||| | ||||||  ||||||||||||| ||||||||||    
T  3921536 ccacaagcatcaccaccaaaaaccaccacgagccccgccacaaatgacccaaaatcagcaccaccaagaaaaccacc 3921612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 293 - 357
Target Start/End: Complemental strand, 6376418 - 6376354
Alignment:
Q  293 ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggc 357  Q
    |||||||||||||| | ||| || ||||||| ||||||| | |||||||||||||||||||||||    
T  6376418 ttatacataaaccaccataggtggcatacacccttttacacccacacacatttgtgacatgtggc 6376354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 173
Target Start/End: Complemental strand, 17282206 - 17282046
Alignment:
Q  3 ctaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaag 102  Q
    |||||||| |||||| |||||| |||| |||| ||||||| |||| ||  |||| |||| ||| ||| ||||||| |||||||          ||||||     
T  17282206 ctaccattgaccaccacaaaaatcaccattaaccctcacctaaaagcaaaaccaaccaccacgcgcagcaccacccaaaacca----------ccacaaa 17282117  T
Q  103 catcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccacca 173  Q
    |||||||||||| ||||||||||||   |  |||| ||||||||  ||||||||||||| |||||||||||    
T  17282116 catcaccaccaaaaaccaccacgagtcccgccacaaaagacccaaaatcagcaccaccaagaaaaccacca 17282046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 365
Target Start/End: Complemental strand, 3831081 - 3831010
Alignment:
Q  292 cttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    ||||||||| ||||| ||||| |||||||||| ||||||| | ||||||  ||||||||| |||||||||||||    
T  3831081 cttatacatgaaccaccttaggtgacatacacccttttacacccacaca--tttgtgacacgtggcaaaaacat 3831010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 14572999 - 14573073
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||||||||| ||||| || ||| ||| |||||||   ||||||||||||||||| || ||||||||||    
T  14572999 tcttatacataaaccaccttaggtggcatccacccttttacatccacacacatttgtgacacgtagcaaaaacat 14573073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 27888778 - 27888824
Alignment:
Q  20 aaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacga 66  Q
    |||||||||| ||||||||||||||||| ||||||||||||| ||||    
T  27888778 aaaaaccaccattaatcctcaccaaaaatcagcaccagccaccacga 27888824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 96 - 169
Target Start/End: Original strand, 34660230 - 34660303
Alignment:
Q  96 ccacaagcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaacc 169  Q
    ||||||| | ||||||||| ||||||||||||| ||  |||| || |||||  |||||||||||||||||||||    
T  34660230 ccacaagaaccaccaccaaaaaccaccacgagcctcgccacaaaacacccaaaatcagcaccaccatgaaaacc 34660303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 173
Target Start/End: Original strand, 1895351 - 1895431
Alignment:
Q  93 ccgccacaagcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccacca 173  Q
    |||||| ||||||||||||||| |||||||||||||  |  |||| ||||||||  ||||  ||||||| |||||||||||    
T  1895351 ccgccataagcatcaccaccaaaaaccaccacgagccccgccacaaaagacccaaaatcaataccaccaagaaaaccacca 1895431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 8e-49; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 3 - 173
Target Start/End: Original strand, 40680874 - 40681044
Alignment:
Q  3 ctaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaag 102  Q
    ||||||||||||||| | ||||||||| |||||||||||||||||||||||||| |||| | |||||||||||||||||| |||||||| || |||| ||    
T  40680874 ctaccattaaccaccacgaaaaccaccattaatcctcaccaaaaaccagcaccaaccaccatgagcatcaccaccaaaaaacaacatcagccaccacgag 40680973  T
Q  103 catcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccacca 173  Q
    |||||||||||| |||||||| ||||| || |||| |||||| ||||||| ||||||||| ||||||||||    
T  40680974 catcaccaccaaaaaccaccatgagcaccaccacaaaagaccaagtatcaacaccaccataaaaaccacca 40681044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 26331263 - 26331090
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccaca 100  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||| ||| ||||||||||||||| ||||||||||||| || ||||     
T  26331263 aactaccattaaccaccacaaaaaccaccattaatcctcaccaaaaacaagcaccagacaccacgagcatcaccacctaaaaccaacatcagccaccacg 26331164  T
Q  101 agcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccaccac 174  Q
    |||||||||||||| ||| |  |||  || || |||| ||||| || ||||| |||||||||  ||||||||||    
T  26331163 agcatcaccaccaaaaactattacggacaccaccacaaaagactcaatatcaacaccaccatagaaaccaccac 26331090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 12156361 - 12156484
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccaca 100  Q
    ||||| || |||||||| ||||||||| | ||||| ||||||||||||||||||||||||| || |||||||||||||||||| |||| || || |||||    
T  12156361 aactatcactaaccaccacaaaaaccatcattaattctcaccaaaaaccagcaccagccaccactagcatcaccaccaaaaactaacaccagccaccaca 12156460  T
Q  101 agcatcaccaccaagaaccaccac 124  Q
    |||||||||| ||| |||||||||    
T  12156461 agcatcaccatcaaaaaccaccac 12156484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 24867251 - 24867100
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccaca 100  Q
    ||||||||||||||| | ||||||||||| |||||||||||||||||  |||||||||||| |||||||||  ||||||||| |  ||  | || ||||     
T  24867251 aactaccattaaccaacacaaaaaccaccattaatcctcaccaaaaattagcaccagccaccacgagcatcctcaccaaaaatcggcactagccaccacg 24867152  T
Q  101 agcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatca 152  Q
    ||  |||||||||| |||||||||||||| || || | ||||||||||||||    
T  24867151 agtctcaccaccaaaaaccaccacgagcaccaccataaaagacccagtatca 24867100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 34574274 - 34574162
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccaca 100  Q
    ||||||||||||||||| ||||| ||||| ||| |||||||||||||||| ||| |||||| |||||||||||||||||||| ||||| || || | ||     
T  34574274 aactaccattaaccaccacaaaa-ccaccattactcctcaccaaaaaccaacactagccaccacgagcatcaccaccaaaaatcaacaccagccactacg 34574176  T
Q  101 agcatcaccaccaa 114  Q
    ||||||||||||||    
T  34574175 agcatcaccaccaa 34574162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 27170327 - 27170243
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaacca 85  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||| || |||||||||| ||| ||| |||||||||||||||    
T  27170327 aactaccattaaccaccacaaaaaccaccattaatcctcaccaaaaagcaacaccagccaccacgcgcagcaccaccaaaaacca 27170243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 12 - 113
Target Start/End: Complemental strand, 42268936 - 42268836
Alignment:
Q  12 accaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccac 111  Q
    |||||| ||||||||||| ||||||||||||||||| ||| ||||||||| ||||||||||||| | |||||||||| || || |||| |||||||||||    
T  42268936 accaccacaaaaaccaccattaatcctcaccaaaaatcagaaccagccaccacgagcatcacca-cgaaaaccaacaccagccaccacgagcatcaccac 42268838  T
Q  112 ca 113  Q
    ||    
T  42268837 ca 42268836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 291 - 365
Target Start/End: Complemental strand, 40888129 - 40888055
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||||||||| ||||| || ||||||||||||||| | ||||||||||||||||| |||||||||||||    
T  40888129 tcttatacataaaccaccttaggtggcatacactcttttacacccacacacatttgtgacacgtggcaaaaacat 40888055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 40600037 - 40599972
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacga 66  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||| || |||||||||| ||||    
T  40600037 aactaccattaaccaccacaaaaaccaccattaatcctcaccaaaaatcaacaccagccaccacga 40599972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 291 - 365
Target Start/End: Complemental strand, 1815803 - 1815729
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| ||||||||||| |||||||||| |||||||   |||||| |||||||||| |||||||||||||    
T  1815803 tcttatacatgaaccatcttaggtgacatacacccttttacatccacacatatttgtgacacgtggcaaaaacat 1815729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 291 - 365
Target Start/End: Complemental strand, 9408226 - 9408152
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| ||||| || || |||||||| | ||||||| ||||||||||||||||||| |||||||||||||    
T  9408226 tcttatacatgaaccacctcaggtgacatacgcccttttacactcacacacatttgtgacacgtggcaaaaacat 9408152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 291 - 365
Target Start/End: Complemental strand, 33404623 - 33404549
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| ||||| ||||| || ||||||| ||||||| | ||||||||||||||||| |||||||||||||    
T  33404623 tcttatacatgaaccaccttaggtgccatacacacttttacacccacacacatttgtgacacgtggcaaaaacat 33404549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 39370931 - 39371005
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| ||||| |||||||| ||||||| ||||||| | ||||||||||||||||| ||| |||||||||    
T  39370931 tcttatacatgaaccaccttagatggcatacacccttttacacccacacacatttgtgacacgtgccaaaaacat 39371005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 26656637 - 26656790
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccaca 100  Q
    |||||||||| |||||| ||||| ||||| |||| | |||| ||||| || |||||||||| ||| |||||||||||||||||||          |||||    
T  26656637 aactaccattgaccaccacaaaa-ccaccattaaccatcactaaaaagcaacaccagccaccacgcgcatcaccaccaaaaacca----------ccaca 26656725  T
Q  101 agcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaa 165  Q
    |||| ||||||||| ||||||||||||| ||  |||| || | |||  |||||||||||||||||    
T  26656726 agcaccaccaccaaaaaccaccacgagcctcgccacaaaacaaccaaaatcagcaccaccatgaa 26656790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 26928224 - 26928377
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccaca 100  Q
    |||||||||| |||||| ||||| ||||| |||| | |||| ||||| || |||||||||| ||| |||||||||||||||||||          |||||    
T  26928224 aactaccattgaccaccacaaaa-ccaccattaaccatcactaaaaagcaacaccagccaccacgcgcatcaccaccaaaaacca----------ccaca 26928312  T
Q  101 agcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaa 165  Q
    |||| ||||||||| ||||||||||||| ||  |||| || | |||  |||||||||||||||||    
T  26928313 agcaccaccaccaaaaaccaccacgagcctcgccacaaaacaaccaaaatcagcaccaccatgaa 26928377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 293 - 365
Target Start/End: Original strand, 2237282 - 2237354
Alignment:
Q  293 ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||| ||||| ||||| |||||||||| ||||||| | |||||| |||||||||| |||||||||||||    
T  2237282 ttatacatgaaccaccttaggtgacatacacccttttacacccacacatatttgtgacacgtggcaaaaacat 2237354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 293 - 365
Target Start/End: Original strand, 13347134 - 13347206
Alignment:
Q  293 ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||| ||||| ||||| || ||||||| ||||||| | ||||||||||||||||| |||||||||||||    
T  13347134 ttatacatgaaccaccttaggtggcatacacccttttacacccacacacatttgtgacacgtggcaaaaacat 13347206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 365
Target Start/End: Complemental strand, 4300730 - 4300656
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| |||||| |||| ||||||| |  ||||||| | |||||| ||||||||||| ||||||||||||    
T  4300730 tcttatacatgaaccattttaggtgacatatatccttttacacccacacatatttgtgacatatggcaaaaacat 4300656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 7271718 - 7271792
Alignment:
Q  4 taccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccacca 78  Q
    ||||||| |||||| ||||||||||| |||| | |||| ||||| || |||||||||| ||| ||||||||||||    
T  7271718 taccattgaccaccacaaaaaccaccattaaccatcactaaaaagcaacaccagccaccacgcgcatcaccacca 7271792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 12164255 - 12164329
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| ||||||||||| || || ||| ||||| |  |||||||||| ||||| ||||||||||||||||    
T  12164255 tcttatacatgaaccatcttaggtggcacacattctttaatactcacacacagttgtggcatgtggcaaaaacat 12164329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 365
Target Start/End: Complemental strand, 27553560 - 27553486
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| |||||| |||| || |||| ||  |||||| | ||||||||||||||||| |||||||||||||    
T  27553560 tcttatacatgaaccattttaggtggcatataccattttacacccacacacatttgtgacacgtggcaaaaacat 27553486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 41355774 - 41355620
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccaca 100  Q
    |||||||||| |||||| |||||| |||| |||| ||||||| |||| || |||||||||| ||   || ||||||| |||||||          |||||    
T  41355774 aactaccattgaccaccacaaaaatcaccattaaccctcacctaaaagcaacaccagccaccacacacaacaccacccaaaacca----------ccaca 41355685  T
Q  101 agcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaa 165  Q
    ||||| |||||||| |||||| ||||||  |  |||| ||||||||  |||||||||||||||||    
T  41355684 agcataaccaccaaaaaccactacgagccccgccacaaaagacccaaaatcagcaccaccatgaa 41355620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 6030564 - 6030500
Alignment:
Q  21 aaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaacca 85  Q
    ||||||||| |||| | |||| ||||| || |||||||||| ||| |||||||||||||||||||    
T  6030564 aaaaccaccattaaccatcactaaaaagcaacaccagccaccacgcgcatcaccaccaaaaacca 6030500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 365
Target Start/End: Complemental strand, 19596252 - 19596180
Alignment:
Q  293 ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||| ||||| ||||| || |||||||  ||||||   ||| |||||||||||||||||||||||||||    
T  19596252 ttatacatgaaccaccttaggtggcatacacctttttacatccacgcacatttgtgacatgtggcaaaaacat 19596180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 42221394 - 42221450
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccag 57  Q
    ||||||||||||||||| |||||| |||| ||| || |||||||| |||||||||||    
T  42221394 aactaccattaaccaccacaaaaatcaccattactcgtcaccaaagaccagcaccag 42221450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 106 - 169
Target Start/End: Original strand, 7271788 - 7271851
Alignment:
Q  106 caccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaacc 169  Q
    ||||||||| ||||||||||||| ||  |||| || |||||  |||||||||||||||||||||    
T  7271788 caccaccaaaaaccaccacgagcctcgccacaaaacacccaaaatcagcaccaccatgaaaacc 7271851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 365
Target Start/End: Original strand, 14831559 - 14831622
Alignment:
Q  302 aaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    ||||| ||||| || ||||||| ||||||| | ||||||||||||||| | |||||||||||||    
T  14831559 aaccaccttaggtggcatacacccttttacacccacacacatttgtgatacgtggcaaaaacat 14831622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 322 - 365
Target Start/End: Original strand, 17225352 - 17225395
Alignment:
Q  322 actcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| | ||||||||||||||||||||| |||||||||    
T  17225352 actcttttacacccacacacatttgtgacatgtgacaaaaacat 17225395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 362
Target Start/End: Complemental strand, 41004031 - 41003965
Alignment:
Q  296 tacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaa 362  Q
    ||||| |||||  |||| || ||||||| ||||||| |||| |||||||| ||||||||||||||||    
T  41004031 tacatgaaccactttaggtggcatacacccttttacactcatacacatttatgacatgtggcaaaaa 41003965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 93; Significance: 3e-45; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 45873108 - 45873280
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccaca 100  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||  ||| |||||||||||||  ||||||||||| || || ||||     
T  45873108 aactaccattaaccaccacaaaaaccaccattaatcctcaccaaaaacaagcaccaaacaccacgagcatcaccataaaaaaccaacaccagccaccacg 45873207  T
Q  101 agcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccacca 173  Q
    |||||||||||||| ||||||||||| || || |||| |||||||| ||| | ||||||||||||||||||||    
T  45873208 agcatcaccaccaaaaaccaccacgaacaccaccacaaaagacccaatattaacaccaccatgaaaaccacca 45873280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 7 - 174
Target Start/End: Original strand, 55728704 - 55728871
Alignment:
Q  7 cattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatc 106  Q
    ||||||||||| ||||||||||| |||||||||||||||||| || ||||||||| || |||||||||||||||||| |||| |  || |||| ||||||    
T  55728704 cattaaccaccacaaaaaccaccattaatcctcaccaaaaactagtaccagccaccactagcatcaccaccaaaaactaacaccggccaccacgagcatc 55728803  T
Q  107 accaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccaccac 174  Q
    |||| ||| || ||||||||||| || |||| || |  |||||||| |||||||||| ||||||||||    
T  55728804 accatcaaaaatcaccacgagcaccaccacaaaaaattcagtatcaacaccaccatggaaaccaccac 55728871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 9 - 124
Target Start/End: Complemental strand, 42677742 - 42677627
Alignment:
Q  9 ttaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcac 108  Q
    ||||||||| ||||||||||| ||||||||||| |||||| |||||||| ||| |||||||||||||||||||| ||||| || || |||||||||||||    
T  42677742 ttaaccaccacaaaaaccaccattaatcctcactaaaaacaagcaccagacaccacgagcatcaccaccaaaaatcaacaccagccaccacaagcatcac 42677643  T
Q  109 caccaagaaccaccac 124  Q
    | |||| |||||||||    
T  42677642 cgccaaaaaccaccac 42677627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 12130520 - 12130633
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccaca 100  Q
    |||||||||| |||||| ||||||| | | ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||| || ||||     
T  12130520 aactaccattgaccaccacaaaaactatcattaatcctcaccaaaaaccagcaccagccaccacgagcatcaccaccaaaacccaaaatcagccaccacg 12130619  T
Q  101 agcatcaccaccaa 114  Q
    | ||||||||||||    
T  12130620 accatcaccaccaa 12130633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 38093221 - 38093393
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccaca 100  Q
    |||||||| |||||||| |||||| |||| | |||||||||||||||||| ||||| | || || |||||||||||||||||| |||| || || ||||     
T  38093221 aactaccaataaccaccacaaaaaacaccataaatcctcaccaaaaaccatcaccatctaccactagcatcaccaccaaaaactaacaccagccaccacg 38093320  T
Q  101 agcatcaccacc-aagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccacc 172  Q
    ||||||||| || || |||||||||||| | || |||| || ||||||||||| |||||||||  ||||||||    
T  38093321 agcatcaccgccaaaaaaccaccacgagtaccaccacaaaaaacccagtatcaacaccaccatagaaaccacc 38093393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 291 - 362
Target Start/End: Complemental strand, 21391142 - 21391071
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaa 362  Q
    |||||||||| ||||| |||||||| ||||||| ||||||| | ||||||||||||||||| ||||||||||    
T  21391142 tcttatacatgaaccaccttagatggcatacacccttttacacccacacacatttgtgacacgtggcaaaaa 21391071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 291 - 365
Target Start/End: Complemental strand, 28093283 - 28093209
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| ||||| ||||| || ||||||| ||||||| | ||||||||||||||||| |||||||||||||    
T  28093283 tcttatacatgaaccaccttaggtggcatacacccttttacacccacacacatttgtgacacgtggcaaaaacat 28093209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 291 - 365
Target Start/End: Complemental strand, 45829444 - 45829370
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| |||||  |||| ||||||||||  |||||| | |||||||||||||||||||||||||||||||    
T  45829444 tcttatacatgaaccactttaggtgacatacacctttttacacccacacacatttgtgacatgtggcaaaaacat 45829370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 46192363 - 46192437
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| || || ||||| || ||||||| ||||||| | |||||||||||||||||||||||||||||||    
T  46192363 tcttatacatgaatcaccttaggtggcatacacccttttacacccacacacatttgtgacatgtggcaaaaacat 46192437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 49243819 - 49243893
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| ||||| ||||| || ||||||| |||||||   |||||||||||||||||||||||||||||||    
T  49243819 tcttatacatgaaccaccttaggtggcatacacccttttacatccacacacatttgtgacatgtggcaaaaacat 49243893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 14441121 - 14441174
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcac 54  Q
    ||||||||||||||| | ||||||||||| ||||||||||||||||||||||||    
T  14441121 aactaccattaaccagcacaaaaaccaccattaatcctcaccaaaaaccagcac 14441174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 47518714 - 47518552
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccaca 100  Q
    |||||||||| |||||| |||||| |||  |||| ||||||| |||| || |||||||||| |||||||  |||||| |||||||          |||||    
T  47518714 aactaccattgaccaccacaaaaatcactattaaccctcacctaaaagcaacaccagccaccacgagcagtaccacccaaaacca----------ccaca 47518625  T
Q  101 agcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccacca 173  Q
    | |||||||||||| ||||||||||||| | | |||| |||| |||  ||||||| ||||| |||||||||||    
T  47518624 aacatcaccaccaaaaaccaccacgagccttaccacaaaagatccaaaatcagcaacaccaagaaaaccacca 47518552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 3672278 - 3672352
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| ||||| ||||| || ||||||| |||||||   ||||||||||||||||| |||||||||||||    
T  3672278 tcttatacatgaaccaccttaggtggcatacacccttttacatccacacacatttgtgacacgtggcaaaaacat 3672352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 6112634 - 6112708
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| ||||| |||||||| |||||||  |||||| | |||||| |||||||||| |||||||||||||    
T  6112634 tcttatacatgaaccaccttagatggcatacaccattttacacccacacatatttgtgacacgtggcaaaaacat 6112708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 7217769 - 7217843
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||||||||| ||||| || ||||||| |||| || |  |||||||||||||||| |||||||||||||    
T  7217769 tcttatacataaaccaccttaggtggcatacaccctttaacacctacacacatttgtgacacgtggcaaaaacat 7217843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 34227256 - 34227172
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaacca 85  Q
    |||||||||| |||| | | ||||||||| |||| ||||||| |||| || |||||||||| ||| ||||||||||| |||||||    
T  34227256 aactaccattgaccatcacgaaaaccaccattaaccctcacctaaaagcaacaccagccaccacgcgcatcaccacccaaaacca 34227172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 291 - 362
Target Start/End: Original strand, 44275710 - 44275781
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaa 362  Q
    |||||||||||||||| ||||| || |||| ||  |||||| ||||||||||||||||||| ||| ||||||    
T  44275710 tcttatacataaaccaccttaggtggcatataccattttacactcacacacatttgtgacacgtgccaaaaa 44275781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 96 - 169
Target Start/End: Complemental strand, 23054411 - 23054338
Alignment:
Q  96 ccacaagcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaacc 169  Q
    ||||||||| ||||||||| ||||| |||||||  |  |||| ||||||||  |||||||||||||||||||||    
T  23054411 ccacaagcaccaccaccaaaaaccatcacgagctccgccacaaaagacccaaaatcagcaccaccatgaaaacc 23054338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 166
Target Start/End: Complemental strand, 24957819 - 24957685
Alignment:
Q  22 aaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccaccaagaaccac 121  Q
    |||| ||| |||| |||||||||||| || |||||||||| ||  |||||||||||||||||||          |||| |||| ||||  ||| || |||    
T  24957819 aaactaccattaaccctcaccaaaaaacaacaccagccaccacatgcatcaccaccaaaaacca----------ccacgagcaccaccgtcaaaaatcac 24957730  T
Q  122 cacgagcatcatcacagaagacccagtatcagcaccaccatgaaa 166  Q
    |||||||| ||||||| |||| |||  ||||||||||||||||||    
T  24957729 cacgagcaccatcacaaaagaaccaaaatcagcaccaccatgaaa 24957685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 331
Target Start/End: Original strand, 43245522 - 43245562
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttac 331  Q
    |||||||||| |||||||||||||||||||||| |||||||    
T  43245522 tcttatacatgaaccatcttagatgacatacacccttttac 43245562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 53202125 - 53202241
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccaca 100  Q
    |||||||||| |||||| |||||| |||| |||| ||||||| |||| || |||||||||| ||| ||| ||| ||| |||||||          |||||    
T  53202125 aactaccattgaccaccacaaaaatcaccattaaccctcacctaaaagcaacaccagccaccacgcgcagcac-acctaaaacca----------ccaca 53202213  T
Q  101 agcatcaccaccaagaaccaccacgagc 128  Q
    |||||||||||||| |||||||||||||    
T  53202214 agcatcaccaccaaaaaccaccacgagc 53202241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 12489256 - 12489182
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcacca 75  Q
    ||||||||||||||||| |||||| |||| |||| | |||| |||  ||| ||||| |||| |||||||||||||    
T  12489256 aactaccattaaccaccacaaaaatcaccattaaccatcacaaaagtccaccaccacccaccacgagcatcacca 12489182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 2e-34; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 21590688 - 21590510
Alignment:
Q  1 aactaccattaaccaccccaaaaa-ccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccac 99  Q
    ||||| ||||||||||| |||||| ||||| ||| | ||||  |||||||| |||||| ||| |||||||||||||| |||||||||||||| || ||||    
T  21590688 aactatcattaaccaccacaaaaaaccaccattagttctcaaaaaaaaccaacaccagtcaccacgagcatcaccacaaaaaaccaacatcagccaccac 21590589  T
Q  100 aagcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccaccacaaaa 178  Q
    |||| |||||| ||| |||||||||||||  || |||| |||||||| |||||||||||||||  |||| |||||||||    
T  21590588 aagcgtcaccatcaaaaaccaccacgagccccaccacaaaagacccaatatcagcaccaccatagaaactaccacaaaa 21590510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 31039006 - 31039129
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccaca 100  Q
    ||||||||||||||||| ||||||||||| ||| |||||||| |||| ||||||||||||| ||||| |||||||||||||||||||| || || |||      
T  31039006 aactaccattaaccaccacaaaaaccaccattactcctcaccgaaaatcagcaccagccaccacgagtatcaccaccaaaaaccaacaccaaccaccatg 31039105  T
Q  101 agcatcaccaccaagaaccaccac 124  Q
    ||||||||||| || |||||||||    
T  31039106 agcatcaccactaaaaaccaccac 31039129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 24718022 - 24718127
Alignment:
Q  12 accaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccac 111  Q
    |||||| ||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||   |||||||||| || || |||| |||||||||||    
T  24718022 accaccacaaaaaccaccattaatcctcaccaaaaatcagcaccagccaccacgagcatcacca-tgaaaaccaacaccaaccaccacgagcatcaccac 24718120  T
Q  112 caagaac 118  Q
    || ||||    
T  24718121 catgaac 24718127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 291 - 365
Target Start/End: Complemental strand, 7700070 - 7699996
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||||||||| |||||||| ||||||| ||||||| | ||||||||||||||||| |||||||||||||    
T  7700070 tcttatacataaaccaccttagatggcatacacccttttacacccacacacatttgtgacacgtggcaaaaacat 7699996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 291 - 365
Target Start/End: Complemental strand, 7700268 - 7700194
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||||||||| |||||||| ||||||| ||||||| | ||||||||||||||||| |||||||||||||    
T  7700268 tcttatacataaaccaccttagatggcatacacccttttacacccacacacatttgtgacacgtggcaaaaacat 7700194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 291 - 365
Target Start/End: Complemental strand, 7700466 - 7700392
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||||||||| |||||||| ||||||| ||||||| | ||||||||||||||||| |||||||||||||    
T  7700466 tcttatacataaaccaccttagatggcatacacccttttacacccacacacatttgtgacacgtggcaaaaacat 7700392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 291 - 365
Target Start/End: Complemental strand, 7700664 - 7700590
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||||||||| |||||||| ||||||| ||||||| | ||||||||||||||||| |||||||||||||    
T  7700664 tcttatacataaaccaccttagatggcatacacccttttacacccacacacatttgtgacacgtggcaaaaacat 7700590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 291 - 365
Target Start/End: Complemental strand, 36346751 - 36346677
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||||||||||||||| || ||||||| ||||||| | || |||||||||||||| |||||||||||||    
T  36346751 tcttatacataaaccatcttaggtggcatacacccttttacacccagacacatttgtgacacgtggcaaaaacat 36346677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 3302434 - 3302518
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaacca 85  Q
    |||||||||| |||||| ||||||||||| ||||  ||||||||||| || |||||||||| ||| ||| |||||||||||||||    
T  3302434 aactaccattgaccaccacaaaaaccaccattaacactcaccaaaaagcaacaccagccaccacgcgcagcaccaccaaaaacca 3302518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 293 - 365
Target Start/End: Original strand, 23980137 - 23980209
Alignment:
Q  293 ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||||||| | ||| || ||||||| ||||||| | |||||||||||||||||||||||||||||||    
T  23980137 ttatacataaaccaccataggtggcatacacccttttacacccacacacatttgtgacatgtggcaaaaacat 23980209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 43047800 - 43047689
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccaca 100  Q
    ||||| ||||||||||| ||||||||||| ||||||||||| ||||| |||||||| |||| |||| ||| |||| | |||||||||| || || ||||     
T  43047800 aactatcattaaccaccacaaaaaccaccattaatcctcacaaaaaatcagcaccaaccaccacgaacattacca-cgaaaaccaacaccagccaccacg 43047702  T
Q  101 agcatcaccacca 113  Q
    ||||||| |||||    
T  43047701 agcatcatcacca 43047689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 293 - 363
Target Start/End: Original strand, 13108154 - 13108224
Alignment:
Q  293 ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaac 363  Q
    |||||||||||||| |||||  | ||||||| ||||||| | |||||||||||||||||||||||||||||    
T  13108154 ttatacataaaccaccttaggcggcatacacccttttacacccacacacatttgtgacatgtggcaaaaac 13108224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 291 - 365
Target Start/End: Complemental strand, 42221150 - 42221076
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| ||||| ||||| || |||||||| |||||| | ||||||||||||||||| |||||||||||||    
T  42221150 tcttatacatgaaccaccttaggtggcatacacttttttacacccacacacatttgtgacacgtggcaaaaacat 42221076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 293 - 365
Target Start/End: Original strand, 31148296 - 31148368
Alignment:
Q  293 ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||| ||||||||||| || ||||||| ||||||| | |||||||||||||||||  ||||||||||||    
T  31148296 ttatacatgaaccatcttaggtggcatacacccttttacacccacacacatttgtgacacatggcaaaaacat 31148368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 291 - 365
Target Start/End: Complemental strand, 26972390 - 26972316
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| ||||| ||||| || ||||||| ||||||| | ||||||||||| ||||| |||||||||||||    
T  26972390 tcttatacatgaaccaccttaggtggcatacacccttttacacccacacacatttatgacacgtggcaaaaacat 26972316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 291 - 365
Target Start/End: Complemental strand, 28307682 - 28307608
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||||||| | ||||| || ||||||| ||||||| | |||||||||||| |||| |||||||||||||    
T  28307682 tcttatacataaactaccttaggtggcatacacccttttacacccacacacatttgcgacacgtggcaaaaacat 28307608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 34108430 - 34108504
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| ||||| ||||| |||||||||| ||||||| | |||||| ||||||||||| || |||||||||    
T  34108430 tcttatacatgaaccaccttaggtgacatacacccttttacacccacacatatttgtgacatatgacaaaaacat 34108504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 293 - 365
Target Start/End: Complemental strand, 5811348 - 5811276
Alignment:
Q  293 ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||||||| | ||| || ||||||  ||||| | | |||||||||||||||||||||||||||||||    
T  5811348 ttatacataaaccaccataggtggcatacatcctttttcacccacacacatttgtgacatgtggcaaaaacat 5811276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 291 - 362
Target Start/End: Complemental strand, 21807509 - 21807438
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaa 362  Q
    |||||||||| ||||| |||||||| |||||||  |||||| | |||||| |||||||| ||||||||||||    
T  21807509 tcttatacatgaaccaccttagatggcatacaccattttacacccacacaaatttgtgatatgtggcaaaaa 21807438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 30887704 - 30887778
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| ||| ||||||| || ||||||| ||||||| | |||| |||||||||||| || ||||||||||    
T  30887704 tcttatacatgaacaatcttaggtggcatacacacttttacacccacatacatttgtgacacgtagcaaaaacat 30887778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 365
Target Start/End: Original strand, 38321014 - 38321087
Alignment:
Q  292 cttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    ||||||||| ||||||||||| || |||||||  ||| || | |||| ||| ||||||||||||||||||||||    
T  38321014 cttatacattaaccatcttaggtggcatacacattttaacacccacatacaattgtgacatgtggcaaaaacat 38321087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 10365746 - 10365810
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacga 66  Q
    |||||||||||||||||  ||||||  ||  |||||||||||||||||||||| ||||||| ||||    
T  10365746 aactaccattaaccacca-aaaaacttccagtaatcctcaccaaaaaccagcatcagccaccacga 10365810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 36582839 - 36582894
Alignment:
Q  5 accattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccac 61  Q
    |||||||||||||  ||||||||||  ||||||||||||||||||| |||| |||||    
T  36582839 accattaaccacca-aaaaaccaccagtaatcctcaccaaaaaccaacacccgccac 36582894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 4e-29; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 32747762 - 32747641
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccaca 100  Q
    ||||||||||||||||| ||||||||||| |||  |||||||||||| |||||| |||||| || ||||||||||||||||||||||| || || |||      
T  32747762 aactaccattaaccaccacaaaaaccaccattacacctcaccaaaaatcagcactagccaccaccagcatcaccaccaaaaaccaacaccagccaccatg 32747663  T
Q  101 agcatcaccaccaagaaccacc 122  Q
    |||||||||||||| |||||||    
T  32747662 agcatcaccaccaaaaaccacc 32747641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 293 - 365
Target Start/End: Original strand, 14022940 - 14023012
Alignment:
Q  293 ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||||||| ||||| || ||||||| ||||||| | |||||||||||||||||||||||||||||||    
T  14022940 ttatacataaaccaccttaggtggcatacacccttttacacccacacacatttgtgacatgtggcaaaaacat 14023012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 291 - 365
Target Start/End: Complemental strand, 3118234 - 3118160
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    ||||||| || ||||| ||||| || ||||||| ||||||| ||||||||||||||||||| |||||||||||||    
T  3118234 tcttatatatgaaccaccttaggtggcatacacccttttacactcacacacatttgtgacacgtggcaaaaacat 3118160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 291 - 365
Target Start/End: Complemental strand, 3987092 - 3987018
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| ||||| ||||| || ||||||| ||||||| | ||||||||||||||||| |||||||||||||    
T  3987092 tcttatacatgaaccaccttaggtggcatacacccttttacacccacacacatttgtgacacgtggcaaaaacat 3987018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 293 - 365
Target Start/End: Original strand, 24208450 - 24208522
Alignment:
Q  293 ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||||||||| ||| ||  ||||||| |||||| | ||||||||||||||| |||||||||||||||    
T  24208450 ttatacataaaccatcataggtggtatacactattttacacccacacacatttgtgatatgtggcaaaaacat 24208522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 13697573 - 13697646
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    ||||||||||||||||||||||||||||| ||| ||||||| | || |||||||||||| | |||| ||||||||    
T  13697573 tcttatacataaaccatcttagatgacatgcacccttttacac-catacacatttgtgatacgtggtaaaaacat 13697646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 111
Target Start/End: Original strand, 30845463 - 30845542
Alignment:
Q  32 taatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccac 111  Q
    ||||||||||| ||||| |||||||||||  ||||||||||||| ||||||| |||| || || |||| |||| ||||||    
T  30845463 taatcctcaccgaaaacaagcaccagccaacacgagcatcaccatcaaaaactaacaccagccaccacgagcaccaccac 30845542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 9566802 - 9566861
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccac 61  Q
    |||||||||||||||||  ||||||||||  ||||||||||||||||||| |||| |||||    
T  9566802 aactaccattaaccacca-aaaaaccaccaataatcctcaccaaaaaccaacacccgccac 9566861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 11366698 - 11366755
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagcc 59  Q
    |||||||||||||||||  ||||||||||  | |||||||||||||||||||| |||||    
T  11366698 aactaccattaaccacca-aaaaaccaccaatgatcctcaccaaaaaccagcatcagcc 11366755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 164
Target Start/End: Original strand, 21881411 - 21881479
Alignment:
Q  96 ccacaagcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatga 164  Q
    ||||||||| ||||||||| ||||||||||||   ||  ||| ||||||||  ||||||||||||||||    
T  21881411 ccacaagcaccaccaccaaaaaccaccacgagtcccacaacaaaagacccaaaatcagcaccaccatga 21881479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 2e-28; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 15050208 - 15050124
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaacca 85  Q
    ||||||||||||||||| ||||||||| | |||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  15050208 aactaccattaaccaccacaaaaaccatcattaatcctcaccaaaaactagcaccagccaccacgagcatcaccaccaaaaacca 15050124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 25142908 - 25143031
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccaca 100  Q
    ||||||||||||||||| |||||| ||||  || |||||||| |||| ||||||||||||| ||||| |||||||||||||| ||||| || || |||      
T  25142908 aactaccattaaccaccacaaaaatcaccactactcctcaccgaaaatcagcaccagccaccacgagtatcaccaccaaaaatcaacaccaaccaccatg 25143007  T
Q  101 agcatcaccaccaagaaccaccac 124  Q
    |||||||||||||| |||||||||    
T  25143008 agcatcaccaccaaaaaccaccac 25143031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 12665348 - 12665422
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| ||||| ||||| || ||||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  12665348 tcttatacatgaaccaccttaggtggcatacacccttttacactcacacacatttgtaacatgtggcaaaaacat 12665422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 23635861 - 23635931
Alignment:
Q  5 accattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcacca 75  Q
    |||||||||| || ||||||||||| ||||||||||||||||| ||||||||||| | |||||||||||||    
T  23635861 accattaacctccacaaaaaccaccattaatcctcaccaaaaatcagcaccagcctccacgagcatcacca 23635931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 15050170 - 15050070
Alignment:
Q  74 caccaaaaaccaacatcatccgccacaagcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccacca 173  Q
    |||||||||| | || || || |||| |||||||||||||| |||||||||||||| || |||| |||||| |||| ||||||||||||  |||||||||    
T  15050170 caccaaaaactagcaccagccaccacgagcatcaccaccaaaaaccaccacgagcaccaccacaaaagacctagtaccagcaccaccattgaaaccacca 15050071  T
Q  174 c 174  Q
    |    
T  15050070 c 15050070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 30432343 - 30432417
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| ||||| |||||||| ||||||| ||||||  | ||||||||||||||||| |||||||||||||    
T  30432343 tcttatacatgaaccaccttagatggcatacacccttttatacccacacacatttgtgacacgtggcaaaaacat 30432417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 5515298 - 5515367
Alignment:
Q  12 accaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaa 81  Q
    |||||| ||||||||||| ||||||||||||||||| |||||||| |||| |||||||||| ||| ||||    
T  5515298 accaccacaaaaaccaccattaatcctcaccaaaaatcagcaccaaccaccacgagcatcatcacgaaaa 5515367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 291 - 362
Target Start/End: Original strand, 36189220 - 36189291
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaa 362  Q
    |||||||||| ||||||||||| || ||||||| ||||||| | |||| |||||||||||| ||||||||||    
T  36189220 tcttatacatgaaccatcttaggtggcatacacccttttacacccacatacatttgtgacacgtggcaaaaa 36189291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 44081784 - 44081858
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| ||||||||||| || ||||||| ||||||| | ||||||||||||| ||| |||| ||||||||    
T  44081784 tcttatacatgaaccatcttaggtggcatacacccttttacacccacacacatttgtaacacgtggaaaaaacat 44081858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 5994491 - 5994575
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaacca 85  Q
    ||||||||||||||||| |||||| |||| |||| ||||||||||||  | ||||| |||| ||| ||| |||||| ||||||||    
T  5994491 aactaccattaaccaccacaaaaatcaccattaaccctcaccaaaaaataacaccaaccaccacgcgcagcaccacaaaaaacca 5994575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 10408713 - 10408793
Alignment:
Q  5 accattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaacca 85  Q
    |||||| |||||| ||||||||||| ||||  |||||| |||| || |||||||||| ||| ||| |||||||||||||||    
T  10408713 accattgaccaccacaaaaaccaccattaactctcacctaaaagcaacaccagccaccacgcgcagcaccaccaaaaacca 10408793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 293 - 365
Target Start/End: Original strand, 33726017 - 33726089
Alignment:
Q  293 ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    ||||||||||||||  |||| || |||||||  |||||| | |||| ||||||||||||||||||||||||||    
T  33726017 ttatacataaaccactttaggtggcatacacctttttacacccacaaacatttgtgacatgtggcaaaaacat 33726089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 42162602 - 42162676
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| ||||| ||||| || ||||||| ||||||| | || |||||||||||||| ||| |||||||||    
T  42162602 tcttatacatgaaccaccttaggtgtcatacacccttttacacccaaacacatttgtgacacgtgacaaaaacat 42162676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 174
Target Start/End: Original strand, 6443925 - 6444057
Alignment:
Q  31 ttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccacaagcatcaccaccaagaaccaccacgagcat 130  Q
    |||| ||||| |||||| || || ||||||| | |||||||||||||||||||||          |||| |||| ||||||||| ||||||  ||||||     
T  6443925 ttaaccctcatcaaaaaacaacaacagccaccatgagcatcaccaccaaaaacca----------ccacgagcaccaccaccaa-aaccacttcgagcac 6444013  T
Q  131 catcacagaagacccagtatcagcaccaccatgaaaaccaccac 174  Q
    || |||| ||||||||  |||||| |||||||||||||||||||    
T  6444014 caccacaaaagacccaaaatcagccccaccatgaaaaccaccac 6444057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 23635816 - 23635864
Alignment:
Q  8 attaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcacca 56  Q
    ||||||| || ||||||||||| ||||||||||||||||| ||||||||    
T  23635816 attaacctccacaaaaaccaccattaatcctcaccaaaaatcagcacca 23635864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 3763086 - 3763043
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaa 44  Q
    ||||||||||||||||| ||||||||| | ||||||||||||||    
T  3763086 aactaccattaaccaccacaaaaaccatcattaatcctcaccaa 3763043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 291 - 362
Target Start/End: Original strand, 10203668 - 10203739
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaa 362  Q
    |||||||||| ||||| ||||| |||||||||  |||||||   ||||||||||||||||| ||| ||||||    
T  10203668 tcttatacatgaaccaccttaggtgacatacatccttttacatccacacacatttgtgacacgtgacaaaaa 10203739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 43186031 - 43186105
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| |||||  |||| || |||| |||||||||| |   ||||||||||||| |||||||||||||||    
T  43186031 tcttatacatcaaccactttaggtggcatatactcttttacacctgcacacatttgtgatatgtggcaaaaacat 43186105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 6e-25; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 31699224 - 31699333
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccaca 100  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||| | | |||||||||| || || ||||     
T  31699224 aactaccattaaccaccacaaaaaccaccattaatcctcaccaaaaatcagcaccagccaccacgagcatcacta-cgaaaaccaacaccagccaccacg 31699322  T
Q  101 agcatcaccac 111  Q
    |||| ||||||    
T  31699323 agcaccaccac 31699333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 237 - 290
Target Start/End: Original strand, 37067076 - 37067129
Alignment:
Q  237 accccaaccataattcttgcaaagtaacccatgttttgtagctcgagctggcgg 290  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  37067076 accccaaccataattcttgcaaagtaacccatgttttgtagctccagctggcgg 37067129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 291 - 362
Target Start/End: Original strand, 21559565 - 21559636
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaa 362  Q
    |||||||||||||||||||||| || ||||||| ||||||| | ||||||||||||||||| ||||||||||    
T  21559565 tcttatacataaaccatcttaggtggcatacacccttttacacccacacacatttgtgacacgtggcaaaaa 21559636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 38231297 - 38231371
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| ||||| ||||| || ||||||| ||||||| | |||||||||||||||||||||||||||||||    
T  38231297 tcttatacatgaaccaccttaggtggcatacacccttttacacccacacacatttgtgacatgtggcaaaaacat 38231371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 291 - 365
Target Start/End: Complemental strand, 46112131 - 46112057
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| ||||||||||| ||||||||||  ||||||   |||||||||||||||||||||||||||||||    
T  46112131 tcttatacatgaaccatcttaggtgacatacaccattttacatccacacacatttgtgacatgtggcaaaaacat 46112057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 22894684 - 22894758
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| ||||| ||||| || ||||||| ||||||| | ||||||||||||||||| |||||||||||||    
T  22894684 tcttatacatgaaccaccttaggtggcatacacccttttacacccacacacatttgtgacacgtggcaaaaacat 22894758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 29460664 - 29460738
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| ||||| ||||| || ||||||| ||||||| | ||||||| |||||||||||||||||||||||    
T  29460664 tcttatacatgaaccaccttaggtggcatacacccttttacacccacacacttttgtgacatgtggcaaaaacat 29460738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 29471516 - 29471590
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| ||||| ||||| || ||||||| ||||||| | ||||||| |||||||||||||||||||||||    
T  29471516 tcttatacatgaaccaccttaggtggcatacacccttttacacccacacacttttgtgacatgtggcaaaaacat 29471590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 36749410 - 36749484
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| ||||| |||||||| |||||||  |||||| | ||||||||||||||||| |||||||||||||    
T  36749410 tcttatacatgaaccaccttagatgtcatacacctttttacacccacacacatttgtgacacgtggcaaaaacat 36749484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 18269959 - 18269875
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaacca 85  Q
    |||| ||||| |||||| ||||||||||| |||| | |||| ||||| || |||||||||| ||| |||||||||||||||||||    
T  18269959 aacttccattgaccaccacaaaaaccaccattaaccatcactaaaaaacaacaccagccaccacgcgcatcaccaccaaaaacca 18269875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 293 - 365
Target Start/End: Complemental strand, 39072458 - 39072386
Alignment:
Q  293 ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||| || || |||||||||||||||| ||||||| | |||| ||||||||||||||||||| ||||||    
T  39072458 ttatacatgaatcaccttagatgacatacacccttttacacccacatacatttgtgacatgtggcataaacat 39072386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 291 - 365
Target Start/End: Complemental strand, 30735682 - 30735608
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    ||||||| || ||||| |||||||| ||||||| ||||||| | ||||||||| ||||||| |||||||||||||    
T  30735682 tcttatatatgaaccaccttagatggcatacacccttttacacccacacacatctgtgacacgtggcaaaaacat 30735608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 291 - 365
Target Start/End: Complemental strand, 34750085 - 34750011
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| ||||| ||||| || ||||||| ||||||| | |||||| |||||||||| |||||||||||||    
T  34750085 tcttatacatgaaccaccttaggtggcatacacccttttacacccacacatatttgtgacacgtggcaaaaacat 34750011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 291 - 365
Target Start/End: Complemental strand, 36370525 - 36370451
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| ||||| ||||| || |||||||  |||||| | ||||||||||||||||||||| |||||||||    
T  36370525 tcttatacatgaaccaccttaggtgtcatacacctttttacacccacacacatttgtgacatgtgacaaaaacat 36370451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 43999993 - 44000067
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| ||||| ||||| || |||||||  |||||| | ||||||||||||||||| |||||||||||||    
T  43999993 tcttatacatgaaccaccttaggtgtcatacacctttttacacccacacacatttgtgacacgtggcaaaaacat 44000067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 362
Target Start/End: Complemental strand, 39467286 - 39467217
Alignment:
Q  293 ttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaa 362  Q
    |||| ||||||||| | |||||||||||||| ||||||| | |||||| |||||||||||||| ||||||    
T  39467286 ttatccataaaccaccatagatgacatacacccttttacacccacacatatttgtgacatgtgccaaaaa 39467217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 365
Target Start/End: Complemental strand, 20856334 - 20856264
Alignment:
Q  295 atacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||| |||||  |||| || ||||||| ||||||| | || ||||||||||||||||||||||||||||    
T  20856334 atacatgaaccactttaggtggcatacacccttttacacccatacacatttgtgacatgtggcaaaaacat 20856264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 43275837 - 43275994
Alignment:
Q  1 aactaccattaaccaccccaaaaa-ccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaaaaaccaacatcatccgccac 99  Q
    |||||||||| |||||| |||||| ||||| |||| |||||||||||| || ||||| |||| |||  || || ||||||||||||          ||||    
T  43275837 aactaccattgaccaccacaaaaaaccaccattaaccctcaccaaaaagcaacaccaaccaccacgcacagcaacaccaaaaacca----------ccac 43275926  T
Q  100 aagcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaa 167  Q
    ||||| |||||| || |||||||||||||  |  |||| ||||||||  |||||||||||||| ||||    
T  43275927 aagcaccaccactaaaaaccaccacgagctccgccacaaaagacccaaaatcagcaccaccataaaaa 43275994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 291 - 365
Target Start/End: Complemental strand, 51339968 - 51339896
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||||||||| ||||| || ||||||  ||||||| | ||||||  ||||||||| |||||||||||||    
T  51339968 tcttatacataaaccaccttaggtggcatacatccttttacacccacaca--tttgtgacacgtggcaaaaacat 51339896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 31699315 - 31699373
Alignment:
Q  118 ccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccaccacaa 176  Q
    |||||||||||| || |||| |||||||| || || |||||||||| ||||||||||||    
T  31699315 ccaccacgagcaccaccacaaaagacccaataccaacaccaccatggaaaccaccacaa 31699373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 173
Target Start/End: Complemental strand, 18269863 - 18269807
Alignment:
Q  117 accaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccacca 173  Q
    ||||||||||||  || |||| ||||||||  |||| ||||||||||||||||||||    
T  18269863 accaccacgagccccaccacaaaagacccaaaatcaacaccaccatgaaaaccacca 18269807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 23272 - 23348
Alignment:
Q  101 agcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatcagcaccaccatgaaaaccaccacaaa 177  Q
    |||||||| ||||| |||||||||||||| || |||| |||||| |||||||||||||||||| |||||||||||||    
T  23272 agcatcacaaccaaaaaccaccacgagcaccaccacaaaagacctagtatcagcaccaccatggaaaccaccacaaa 23348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 6722 - 6796
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| ||||| ||||| || ||||||| ||||||| | ||||||||||||||||| |||||||||||||    
T  6722 tcttatacatgaaccaccttaggtggcatacacccttttacacccacacacatttgtgacacgtggcaaaaacat 6796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 2944 - 3021
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcaccaccaa 79  Q
    ||||||||||||||||| ||||| | ||| ||| |||||||||||||||||||||| |||| |||||| ||||||||||    
T  2944 aactaccattaaccaccacaaaatc-accattactcctcaccaaaaaccagcaccaaccaccacgagcttcaccaccaa 3021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 365
Target Start/End: Complemental strand, 87350 - 87277
Alignment:
Q  291 tcttatacataaaccatcttagatgacatacactcttttacgctcacacacatttgtgacatgtggcaaaaacat 365  Q
    |||||||||| ||||| ||||| || ||||||| ||| ||| | ||||||||||||||||| |||||||||||||    
T  87350 tcttatacatgaaccaccttaggtggcatacacccttgtacac-cacacacatttgtgacacgtggcaaaaacat 87277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 31221 - 31295
Alignment:
Q  1 aactaccattaaccaccccaaaaaccaccgttaatcctcaccaaaaaccagcaccagccacaacgagcatcacca 75  Q
    ||||||||||||||||| |||||| |||| |||| | |||| |||  ||| ||||| |||| |||||||||||||    
T  31221 aactaccattaaccaccacaaaaatcaccattaaccatcacaaaagtccaccaccacccaccacgagcatcacca 31295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 152
Target Start/End: Complemental strand, 42912 - 42826
Alignment:
Q  66 agcatcaccaccaaaaaccaacatcatccgccacaagcatcaccaccaagaaccaccacgagcatcatcacagaagacccagtatca 152  Q
    |||||||||||||||||| |||| |||||  |||  |||||||| |||| |||||||||||| | || |||| || ||| |||||||    
T  42912 agcatcaccaccaaaaactaacaccatccatcacgcgcatcaccgccaaaaaccaccacgagtaccaccacaaaaaacctagtatca 42826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0725 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 1080 - 1121
Alignment:
Q  20 aaaaaccaccgttaatcctcaccaaaaaccagcaccagccac 61  Q
    ||||||||||  |||||||||||||||||||||||| |||||    
T  1080 aaaaaccaccagtaatcctcaccaaaaaccagcacccgccac 1121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 26996 - 27037
Alignment:
Q  20 aaaaaccaccgttaatcctcaccaaaaaccagcaccagccac 61  Q
    ||||||||||  |||||||||||||||||||||||| |||||    
T  26996 aaaaaccaccagtaatcctcaccaaaaaccagcacccgccac 27037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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