View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6054_high_1 (Length: 459)
Name: NF6054_high_1
Description: NF6054
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6054_high_1 |
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Alignment Details
Target: chr7 (Bit Score: 407; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 407; E-Value: 0
Query Start/End: Original strand, 13 - 444
Target Start/End: Complemental strand, 32295950 - 32295519
Alignment:
| Q |
13 |
aaaatctatctaaaagtgaaagaggacactgaacagtaccggcacactacaccagctttggtttagtttaggtaatttgttagggttcagccgttgaagg |
112 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32295950 |
aaaatctatctaaaagtgaaagaggacactgaacagtaccggcacactacaccagcgttggtttagtttaggtaatttgttagggttcagccgttgaagg |
32295851 |
T |
|
| Q |
113 |
tgaaatagggttttcgatctatatataaaaccctacaaacgactccttcactctgcaaacaccttcttcttcttcgtcaacgatgaatggttggagaagc |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32295850 |
tgaaatagggttttcgatctatatataaaaccctacaaacgactccttcactctgcaaacaccttcttcttcttcgtcaacgatgaatggttggagaagc |
32295751 |
T |
|
| Q |
213 |
ctcattctacggatcggtgataagagtcccgaatatggaacttcctccgacttcaaagatcacattgttcgctttcttcttctctctttcgccttttccg |
312 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32295750 |
ctcattctacggatcggtgataagagtcccgaatatggaacttcctccgacttcaaagatcacattgttcgctttcttcttctctctttcgccttttccg |
32295651 |
T |
|
| Q |
313 |
ctcaacttattcttcaattcgattatttgattctcctaacgcgnnnnnnncataatttttcaggaaacctgttttggtgtccttcgtcgtgagctcgaca |
412 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32295650 |
ctcaacttattcttcaattcgattatttgattctcctaacgcgtttttttcataatttttcaggaaacctgttttggtgtccttcgtcgtgagctcgaca |
32295551 |
T |
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| Q |
413 |
actctcaaactgagattttggaggtaagtact |
444 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
32295550 |
actctcaaactgagattttggaggtaagtact |
32295519 |
T |
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