View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6054_low_6 (Length: 277)
Name: NF6054_low_6
Description: NF6054
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6054_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 20 - 266
Target Start/End: Complemental strand, 44650113 - 44649868
Alignment:
| Q |
20 |
gatcaaacaatcacctggtctttgttaattgttagatttcttattatttttccgttaaatggaaattgtcatattcaaatcgtgtgtatcctctnnnnnn |
119 |
Q |
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| T |
44650113 |
gatcaaacaatcacctggtctttgttaattgttagatttcttattatttttccgttaaatggaaattgtcatattcaaatcgtgtgtatcctctaaaaaa |
44650014 |
T |
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| Q |
120 |
nnntcatgtgaatatgtagcaaactttttgataaagaaatccttaatttacaaaccccatgtagcttatgcaagaggatagtcaatagaacctaactcca |
219 |
Q |
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| T |
44650013 |
aa-tcatgtgaatatgtagcaaactttttgataaagaaatccttaatttacaaaccccatgtagcttatgcaagaggatagtcaatagaacctaacacca |
44649915 |
T |
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| Q |
220 |
aaccaaaacaagcaaattaataagacaaaaacttgtttacggttcat |
266 |
Q |
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| T |
44649914 |
aaccaaaacaagcaaattaataagacaaaaacttgtttacggttcat |
44649868 |
T |
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