View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6058_low_3 (Length: 294)
Name: NF6058_low_3
Description: NF6058
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6058_low_3 |
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Alignment Details
Target: chr6 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 13 - 277
Target Start/End: Complemental strand, 1672492 - 1672228
Alignment:
| Q |
13 |
aatatcgatatcatttgtggaaatataaccattactatcatgcgggcccaatgtgatgttatcttatctagagtatcaagatgaatggatgaagacattc |
112 |
Q |
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| T |
1672492 |
aatatcgatatcatttgtggaaatataaccattattatcatgcgggcccaatgtcatgttatcttatctagagtatcaagatgaatggatgaagacattc |
1672393 |
T |
|
| Q |
113 |
ccaccaatgttgtttgttacatgacatcctcttttacaaaacaaaacataaacctcaaactttgttcaacaaaaccttatctatctatctatgtctatgt |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1672392 |
ccaccaatgttgtttgttacatgacatcctcttttacaaaacaaaacataaacctcaaactttgttcaacaaaaccttatctatctatctatgtctatgt |
1672293 |
T |
|
| Q |
213 |
tctaacatcttacacttccaccgtctctttctctctaccttcaatggcatcatccatcattcctc |
277 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1672292 |
tctaacatcttacacttccaccgtctctttctctctaccttcaatggcatcatccatcattcctc |
1672228 |
T |
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