View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6059_high_14 (Length: 256)
Name: NF6059_high_14
Description: NF6059
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6059_high_14 |
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Alignment Details
Target: chr7 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 21831237 - 21831309
Alignment:
| Q |
170 |
gtgttgtgttt-ggtagagaagtggaagagaggaaattgagggaagaaggagaggtcggttacggttatggat |
241 |
Q |
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| T |
21831237 |
gtgttgtgttttggtagagaagtggaagagaggaaattgagggaagaaggagaggtcggttacagttatggat |
21831309 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 21831085 - 21831125
Alignment:
| Q |
19 |
atggaaaacgctatgacaaatatgaaatgtaatggaaaacg |
59 |
Q |
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| T |
21831085 |
atggaaaacgctatgacaaatatgaaatgtaatggaaaacg |
21831125 |
T |
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