View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6059_low_9 (Length: 334)

Name: NF6059_low_9
Description: NF6059
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6059_low_9
NF6059_low_9
[»] chr3 (22 HSPs)
chr3 (14-111)||(33592855-33592952)
chr3 (14-111)||(33599986-33600083)
chr3 (16-111)||(33585864-33585960)
chr3 (193-252)||(33592786-33592845)
chr3 (193-252)||(33599917-33599976)
chr3 (144-192)||(52246582-52246630)
chr3 (143-192)||(4168183-4168232)
chr3 (143-194)||(18014670-18014721)
chr3 (143-194)||(46352632-46352683)
chr3 (143-193)||(272219-272269)
chr3 (143-193)||(41304004-41304054)
chr3 (143-193)||(49893330-49893380)
chr3 (143-200)||(43786863-43786920)
chr3 (144-192)||(28139309-28139357)
chr3 (144-191)||(42964387-42964434)
chr3 (143-194)||(52520679-52520730)
chr3 (144-194)||(40362718-40362768)
chr3 (143-197)||(48725266-48725320)
chr3 (143-192)||(20923992-20924041)
chr3 (143-192)||(23925280-23925329)
chr3 (143-192)||(39074419-39074468)
chr3 (142-186)||(50395698-50395742)
[»] chr6 (16 HSPs)
chr6 (143-195)||(23402135-23402187)
chr6 (143-198)||(20897942-20897997)
chr6 (143-193)||(29451252-29451301)
chr6 (143-192)||(28225221-28225270)
chr6 (151-192)||(34712271-34712312)
chr6 (142-194)||(7851295-7851347)
chr6 (143-199)||(12525712-12525768)
chr6 (143-195)||(34396664-34396716)
chr6 (144-192)||(35043890-35043938)
chr6 (143-202)||(3515756-3515815)
chr6 (143-197)||(392091-392145)
chr6 (143-201)||(2350643-2350701)
chr6 (143-193)||(13529454-13529504)
chr6 (143-193)||(27433491-27433541)
chr6 (143-192)||(21878484-21878533)
chr6 (143-192)||(29978233-29978281)
[»] chr1 (15 HSPs)
chr1 (145-200)||(5694313-5694368)
chr1 (143-194)||(18043160-18043211)
chr1 (143-193)||(29657770-29657820)
chr1 (143-194)||(51065885-51065936)
chr1 (143-196)||(28726042-28726096)
chr1 (143-193)||(29210412-29210462)
chr1 (144-194)||(29683193-29683243)
chr1 (144-193)||(13961211-13961260)
chr1 (142-198)||(38162844-38162900)
chr1 (143-197)||(42770127-42770181)
chr1 (153-186)||(12377219-12377252)
chr1 (143-196)||(15227735-15227788)
chr1 (143-192)||(17333419-17333467)
chr1 (143-192)||(24178600-24178649)
chr1 (151-192)||(38595898-38595939)
[»] chr8 (20 HSPs)
chr8 (146-196)||(4537884-4537934)
chr8 (143-193)||(11112638-11112688)
chr8 (143-194)||(27988636-27988687)
chr8 (143-194)||(28045938-28045989)
chr8 (151-203)||(2490334-2490386)
chr8 (143-195)||(9278209-9278261)
chr8 (143-195)||(33357266-33357318)
chr8 (143-194)||(168464-168515)
chr8 (143-190)||(20831690-20831737)
chr8 (143-200)||(30675709-30675766)
chr8 (144-199)||(16785080-16785134)
chr8 (142-192)||(16394197-16394247)
chr8 (151-201)||(39751617-39751667)
chr8 (143-192)||(2805397-2805446)
chr8 (151-200)||(13643004-13643053)
chr8 (151-200)||(13743429-13743478)
chr8 (143-192)||(34228682-34228731)
chr8 (143-192)||(37373206-37373254)
chr8 (154-190)||(7261954-7261990)
chr8 (142-198)||(10618012-10618068)
[»] chr4 (20 HSPs)
chr4 (143-197)||(32217040-32217094)
chr4 (143-195)||(43944504-43944556)
chr4 (144-200)||(46688348-46688404)
chr4 (151-193)||(10110147-10110189)
chr4 (141-197)||(16572623-16572679)
chr4 (150-194)||(29591187-29591231)
chr4 (143-194)||(15186241-15186292)
chr4 (151-190)||(22225891-22225930)
chr4 (143-198)||(43202520-43202575)
chr4 (143-194)||(52533922-52533973)
chr4 (143-193)||(4268959-4269009)
chr4 (143-193)||(18068016-18068066)
chr4 (150-192)||(54897308-54897350)
chr4 (153-194)||(12701917-12701958)
chr4 (143-200)||(16536040-16536097)
chr4 (143-200)||(32202617-32202674)
chr4 (144-193)||(55882683-55882732)
chr4 (142-194)||(8133732-8133783)
chr4 (143-195)||(12356241-12356293)
chr4 (155-195)||(33108821-33108861)
[»] chr7 (23 HSPs)
chr7 (143-192)||(34606261-34606310)
chr7 (143-189)||(11686461-11686507)
chr7 (16-100)||(18830407-18830493)
chr7 (143-192)||(47118101-47118150)
chr7 (150-198)||(18485955-18486003)
chr7 (19-104)||(8071437-8071524)
chr7 (144-190)||(22973600-22973646)
chr7 (143-200)||(7689337-7689394)
chr7 (143-192)||(43594173-43594222)
chr7 (150-198)||(27456257-27456304)
chr7 (143-195)||(34333281-34333333)
chr7 (151-199)||(34557036-34557083)
chr7 (143-194)||(29993624-29993675)
chr7 (144-203)||(38128430-38128489)
chr7 (143-197)||(12218573-12218627)
chr7 (143-189)||(28262034-28262080)
chr7 (143-193)||(37631679-37631729)
chr7 (153-186)||(21869406-21869439)
chr7 (142-191)||(47656981-47657030)
chr7 (144-192)||(1736980-1737028)
chr7 (151-195)||(6097333-6097377)
chr7 (151-195)||(20402386-20402430)
chr7 (143-191)||(28587911-28587958)
[»] scaffold0014 (1 HSPs)
scaffold0014 (144-196)||(68428-68480)
[»] chr2 (16 HSPs)
chr2 (143-195)||(30486207-30486259)
chr2 (143-195)||(31390009-31390061)
chr2 (143-193)||(26891800-26891850)
chr2 (156-196)||(20252736-20252776)
chr2 (143-194)||(561655-561706)
chr2 (144-193)||(1859161-1859210)
chr2 (154-199)||(35851917-35851962)
chr2 (143-192)||(44587902-44587951)
chr2 (143-195)||(22068456-22068508)
chr2 (153-196)||(20363910-20363953)
chr2 (142-193)||(32361005-32361056)
chr2 (153-199)||(35470367-35470413)
chr2 (143-192)||(20552931-20552980)
chr2 (144-193)||(22887749-22887798)
chr2 (143-192)||(31438646-31438695)
chr2 (143-195)||(26387201-26387253)
[»] chr5 (15 HSPs)
chr5 (143-194)||(35132520-35132571)
chr5 (142-191)||(2619693-2619742)
chr5 (143-202)||(10054489-10054548)
chr5 (151-194)||(21945006-21945049)
chr5 (143-192)||(10069969-10070018)
chr5 (143-192)||(35504377-35504426)
chr5 (143-194)||(13470149-13470200)
chr5 (143-194)||(13661806-13661857)
chr5 (142-192)||(6283562-6283612)
chr5 (155-193)||(10955950-10955988)
chr5 (143-192)||(11958104-11958153)
chr5 (151-192)||(40608681-40608722)
chr5 (153-201)||(8950180-8950228)
chr5 (144-196)||(20175223-20175275)
chr5 (145-197)||(39069376-39069428)
[»] scaffold0038 (1 HSPs)
scaffold0038 (143-192)||(25719-25768)
[»] scaffold0264 (1 HSPs)
scaffold0264 (143-194)||(22959-23010)
[»] scaffold0206 (1 HSPs)
scaffold0206 (143-193)||(11107-11155)
[»] scaffold0003 (1 HSPs)
scaffold0003 (143-193)||(53822-53872)
[»] scaffold0045 (1 HSPs)
scaffold0045 (143-192)||(50548-50597)
[»] scaffold0190 (1 HSPs)
scaffold0190 (144-192)||(14896-14944)
[»] scaffold0188 (1 HSPs)
scaffold0188 (143-191)||(6247-6295)


Alignment Details
Target: chr3 (Bit Score: 90; Significance: 2e-43; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 14 - 111
Target Start/End: Complemental strand, 33592952 - 33592855
Alignment:
Q  14 agtataagctagcatttgaagcttttgcgttaacgtgtgagttgtgtgattttatggaaaacgtggtttgtataacacagaagcaaacatgtacttag 111  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  33592952 agtataagctagcatttgaagcttttgcgttaacatgtgagttgtgtgattttatggaaaacgtggtttgtataacgcagaagcaaacatgtacttag 33592855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 14 - 111
Target Start/End: Complemental strand, 33600083 - 33599986
Alignment:
Q  14 agtataagctagcatttgaagcttttgcgttaacgtgtgagttgtgtgattttatggaaaacgtggtttgtataacacagaagcaaacatgtacttag 111  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  33600083 agtataagctagcatttgaagcttttgcgttaacatgtgagttgtgtgattttatggaaaacgtggtttgtataacgcagaagcaaacatgtacttag 33599986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 33585960 - 33585864
Alignment:
Q  16 tataagctagcatttgaagcttttgcgttaacgtg-tgagttgtgtgattttatggaaaacgtggtttgtataacacagaagcaaacatgtacttag 111  Q
    ||||||||||| |||||||||||||||||||| || ||||||||||| | ||||||||||||||||||||| |||  ||||||||||||||||||||    
T  33585960 tataagctagcgtttgaagcttttgcgttaacttggtgagttgtgtggtattatggaaaacgtggtttgtaaaacgtagaagcaaacatgtacttag 33585864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 193 - 252
Target Start/End: Complemental strand, 33592845 - 33592786
Alignment:
Q  193 ttaaaatataattccaagaatgtgtgttatgacaatgacgaagagagagaattagtcatt 252  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  33592845 ttaaaatataattccaagaatgtatgttatgacactgacgaagagagagaattagtcatt 33592786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 193 - 252
Target Start/End: Complemental strand, 33599976 - 33599917
Alignment:
Q  193 ttaaaatataattccaagaatgtgtgttatgacaatgacgaagagagagaattagtcatt 252  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  33599976 ttaaaatataattccaagaatgtatgttatgacactgacgaagagagagaattagtcatt 33599917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 52246630 - 52246582
Alignment:
Q  144 ttttttatatccttaaccagtgtcccggaggcaccagttagcatttccc 192  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  52246630 tttttcatatccttaaccagtgccccggaggcaccagttagcatttccc 52246582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 4168232 - 4168183
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccc 192  Q
    ||||||||||||||||||||||  |||||||||||| |||||||||||||    
T  4168232 cttttttatatccttaaccagttccccggaggcaccggttagcatttccc 4168183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 194
Target Start/End: Complemental strand, 18014721 - 18014670
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccctt 194  Q
    |||||| |||||||||| ||||| ||||| ||||||||||||||||||||||    
T  18014721 ctttttcatatccttaatcagtgccccgggggcaccagttagcatttccctt 18014670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 194
Target Start/End: Complemental strand, 46352683 - 46352632
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccctt 194  Q
    |||||| |||||||||||||||| ||||| |||||| |||||||||||||||    
T  46352683 ctttttcatatccttaaccagtgccccgggggcaccggttagcatttccctt 46352632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 272269 - 272219
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccct 193  Q
    |||||| |||||||||||||||| ||||| |||||| ||||||||||||||    
T  272269 ctttttcatatccttaaccagtgccccgggggcaccggttagcatttccct 272219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 41304054 - 41304004
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccct 193  Q
    |||||| ||||||||||||| || |||||||||||| ||||||||||||||    
T  41304054 ctttttcatatccttaaccactgccccggaggcaccggttagcatttccct 41304004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 49893380 - 49893330
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccct 193  Q
    |||||| |||||||||||||||| ||||| |||||| ||||||||||||||    
T  49893380 ctttttcatatccttaaccagtgccccgggggcaccggttagcatttccct 49893330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 43786920 - 43786863
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttcccttaaaata 200  Q
    |||||| ||| | |||||||||| |||||||||||| ||||||||||||| |||||||    
T  43786920 ctttttcataccattaaccagtgccccggaggcaccggttagcatttcccataaaata 43786863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 28139357 - 28139309
Alignment:
Q  144 ttttttatatccttaaccagtgtcccggaggcaccagttagcatttccc 192  Q
    ||||| ||||||||||||||||||  || ||||||||||||||||||||    
T  28139357 tttttcatatccttaaccagtgtcttgggggcaccagttagcatttccc 28139309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 191
Target Start/End: Original strand, 42964387 - 42964434
Alignment:
Q  144 ttttttatatccttaaccagtgtcccggaggcaccagttagcatttcc 191  Q
    ||||| |||||||||||||||| |||||| |||||||||| |||||||    
T  42964387 tttttcatatccttaaccagtgccccggaagcaccagttaacatttcc 42964434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 143 - 194
Target Start/End: Complemental strand, 52520730 - 52520679
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccctt 194  Q
    |||||| ||| |||||||||||| ||||| |||||| |||||||||||||||    
T  52520730 ctttttcatacccttaaccagtgccccgggggcaccggttagcatttccctt 52520679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 40362718 - 40362768
Alignment:
Q  144 ttttttatatccttaaccagtgtcccggaggcaccagttagcatttccctt 194  Q
    ||||| |||||||||| ||||| |||||||||||  |||||||||||||||    
T  40362718 tttttcatatccttaatcagtgccccggaggcacgggttagcatttccctt 40362768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 48725320 - 48725266
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttcccttaaa 197  Q
    |||||| |||||||||||||||| ||| | |||||| ||||||||||||| ||||    
T  48725320 ctttttcatatccttaaccagtgcccccggggcaccggttagcatttcccataaa 48725266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 20924041 - 20923992
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccc 192  Q
    |||||| ||| |||||||||||| |||||| ||||| |||||||||||||    
T  20924041 ctttttcatacccttaaccagtgccccggaagcaccggttagcatttccc 20923992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 23925329 - 23925280
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccc 192  Q
    ||||||||||| ||||||||||  ||||| || |||||||||||||||||    
T  23925329 cttttttatattcttaaccagttccccgggggtaccagttagcatttccc 23925280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 39074468 - 39074419
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccc 192  Q
    |||||| ||| |||||||||||| ||||| |||||| |||||||||||||    
T  39074468 ctttttcatacccttaaccagtgccccgggggcaccggttagcatttccc 39074419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 50395698 - 50395742
Alignment:
Q  142 tcttttttatatccttaaccagtgtcccggaggcaccagttagca 186  Q
    ||||||| |||||| ||||||||||||||| |||||| |||||||    
T  50395698 tctttttcatatccctaaccagtgtcccgggggcaccggttagca 50395742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 23402187 - 23402135
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccctta 195  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  23402187 ctttttcatatccttaaccagtgccccggaggcaccagttagcatttccctta 23402135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 198
Target Start/End: Complemental strand, 20897997 - 20897942
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttcccttaaaa 198  Q
    |||||| |||||||||||||||| || || |||||| |||||||||||||||||||    
T  20897997 ctttttcatatccttaaccagtgccctgggggcaccggttagcatttcccttaaaa 20897942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 29451252 - 29451301
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccct 193  Q
    |||||| |||||||||||| ||| |||||||||||||||||||||||||||    
T  29451252 ctttttcatatccttaaccggtg-cccggaggcaccagttagcatttccct 29451301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 28225270 - 28225221
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccc 192  Q
    |||||| |||||||||||| || |||| ||||||||||||||||||||||    
T  28225270 ctttttcatatccttaacccgtatcccagaggcaccagttagcatttccc 28225221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 34712271 - 34712312
Alignment:
Q  151 tatccttaaccagtgtcccggaggcaccagttagcatttccc 192  Q
    ||||||||||||||| |||||||||||| |||||||||||||    
T  34712271 tatccttaaccagtgccccggaggcaccggttagcatttccc 34712312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 7851295 - 7851347
Alignment:
Q  142 tcttttttatatccttaaccagtgtcccggaggcaccagttagcatttccctt 194  Q
    ||||||| |||||||||||||||| || || |||||| |||||||||||||||    
T  7851295 tctttttcatatccttaaccagtgccctgggggcaccggttagcatttccctt 7851347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 12525768 - 12525712
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttcccttaaaat 199  Q
    |||||| ||| |||||||||||  |||||||||||| ||||||||||||||| ||||    
T  12525768 ctttttcatacccttaaccagtaccccggaggcaccggttagcatttccctttaaat 12525712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 34396664 - 34396716
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccctta 195  Q
    |||||| |||||||||||| |||||| || |||||| ||||||||||||||||    
T  34396664 ctttttcatatccttaacctgtgtcctgggggcaccggttagcatttccctta 34396716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 35043938 - 35043890
Alignment:
Q  144 ttttttatatccttaaccagtgtcccggaggcaccagttagcatttccc 192  Q
    ||||| |||||||||||||||||||||  | ||||||||||||||||||    
T  35043938 tttttcatatccttaaccagtgtcccgtggacaccagttagcatttccc 35043890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 3515815 - 3515756
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttcccttaaaatata 202  Q
    |||||| ||| |||||||||||| || || |||||| ||||||||||||||| |||||||    
T  3515815 ctttttcatacccttaaccagtgccctgggggcaccggttagcatttccctttaaatata 3515756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 392145 - 392091
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttcccttaaa 197  Q
    |||||| ||| |||||||||||| ||||| |||||| ||||||||||||| ||||    
T  392145 ctttttcatacccttaaccagtgccccgggggcaccggttagcatttcccataaa 392091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 2350701 - 2350643
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttcccttaaaatat 201  Q
    |||||| |||||||||||||||| |||||  ||||| ||||||||||| | ||||||||    
T  2350701 ctttttcatatccttaaccagtgccccgggagcaccggttagcatttcacataaaatat 2350643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 13529504 - 13529454
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccct 193  Q
    |||||| | |||||||||||||| |||| |||||| |||||||||||||||    
T  13529504 ctttttcacatccttaaccagtgccccgaaggcacaagttagcatttccct 13529454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 27433541 - 27433491
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccct 193  Q
    |||||| ||| |||||||||||| ||||| |||||| ||||||||||||||    
T  27433541 ctttttcatacccttaaccagtgccccgggggcaccggttagcatttccct 27433491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 192
Target Start/End: Original strand, 21878484 - 21878533
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccc 192  Q
    |||||| |||||||||||| ||| || ||||||||| |||||||||||||    
T  21878484 ctttttcatatccttaacccgtgcccgggaggcaccggttagcatttccc 21878533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 29978281 - 29978233
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccc 192  Q
    |||||| ||||||||||| ||||||| ||||||||| |||||||||||||    
T  29978281 ctttttcatatccttaactagtgtcc-ggaggcaccggttagcatttccc 29978233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 5e-16; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 5694368 - 5694313
Alignment:
Q  145 tttttatatccttaaccagtgtcccggaggcaccagttagcatttcccttaaaata 200  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||    
T  5694368 tttttatatccttaaccagtgccccggaggcaccggttagcatttcccataaaata 5694313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 194
Target Start/End: Complemental strand, 18043211 - 18043160
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccctt 194  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||||||||    
T  18043211 cttttttatacccttaaccagtgccccggaggcaccggttagcatttccctt 18043160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 29657820 - 29657770
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccct 193  Q
    ||||||||||||||||||||||| ||||| |||||| ||||||||||||||    
T  29657820 cttttttatatccttaaccagtgccccgggggcaccggttagcatttccct 29657770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 194
Target Start/End: Original strand, 51065885 - 51065936
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccctt 194  Q
    |||||| |||||||||||||||||||||| | |||| |||||||||||||||    
T  51065885 ctttttcatatccttaaccagtgtcccggggacaccggttagcatttccctt 51065936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 28726042 - 28726096
Alignment:
Q  143 cttttttat-atccttaaccagtgtcccggaggcaccagttagcatttcccttaa 196  Q
    ||||||||| |||||||||||||| ||||| |||||| |||||||||||||||||    
T  28726042 cttttttattatccttaaccagtgccccgggggcaccggttagcatttcccttaa 28726096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 29210462 - 29210412
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccct 193  Q
    |||||| ||| |||||||||||| |||||||||||| ||||||||||||||    
T  29210462 ctttttcatacccttaaccagtgccccggaggcaccggttagcatttccct 29210412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 194
Target Start/End: Complemental strand, 29683243 - 29683193
Alignment:
Q  144 ttttttatatccttaaccagtgtcccggaggcaccagttagcatttccctt 194  Q
    ||||||||||| |||||||||| ||||| |||||| |||||||||||||||    
T  29683243 ttttttatatctttaaccagtgccccgggggcaccggttagcatttccctt 29683193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 13961260 - 13961211
Alignment:
Q  144 ttttttatatccttaaccagtgtcccggaggcaccagttagcatttccct 193  Q
    |||||||||||||||||| ||| ||||| |||||| ||||||||||||||    
T  13961260 ttttttatatccttaacccgtgccccgggggcaccggttagcatttccct 13961211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 38162900 - 38162844
Alignment:
Q  142 tcttttttatatccttaaccagtgtcccggaggcaccagttagcatttcccttaaaa 198  Q
    ||||||| ||| |||||||||||| |||||||||||| |||| |||||||| |||||    
T  38162900 tctttttcatacccttaaccagtgccccggaggcaccggttaacatttcccataaaa 38162844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 197
Target Start/End: Original strand, 42770127 - 42770181
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttcccttaaa 197  Q
    |||||| ||| | |||||||||| ||||| |||||| ||||||||||||||||||    
T  42770127 ctttttcataccattaaccagtgccccgggggcaccggttagcatttcccttaaa 42770181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 186
Target Start/End: Complemental strand, 12377252 - 12377219
Alignment:
Q  153 tccttaaccagtgtcccggaggcaccagttagca 186  Q
    |||||||||||||||||||||||||| |||||||    
T  12377252 tccttaaccagtgtcccggaggcaccggttagca 12377219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 15227788 - 15227735
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttcccttaa 196  Q
    |||||| |||||||||||||||| ||| | || ||| |||||||||||||||||    
T  15227788 ctttttcatatccttaaccagtgcccccggggtaccggttagcatttcccttaa 15227735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 192
Target Start/End: Original strand, 17333419 - 17333467
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccc 192  Q
    |||||| |||||||||||||||| ||||| |||||| |||||||||||||    
T  17333419 ctttttcatatccttaaccagtg-cccgggggcaccggttagcatttccc 17333467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 192
Target Start/End: Original strand, 24178600 - 24178649
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccc 192  Q
    |||||| |||||||||||||||| ||||| |||| | |||||||||||||    
T  24178600 ctttttcatatccttaaccagtgccccgggggcatcggttagcatttccc 24178649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 38595898 - 38595939
Alignment:
Q  151 tatccttaaccagtgtcccggaggcaccagttagcatttccc 192  Q
    ||||||||||||||| ||||| |||||| |||||||||||||    
T  38595898 tatccttaaccagtgccccgggggcaccggttagcatttccc 38595939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 196
Target Start/End: Original strand, 4537884 - 4537934
Alignment:
Q  146 ttttatatccttaaccagtgtcccggaggcaccagttagcatttcccttaa 196  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  4537884 ttttatatccttaaccagtgccccggaggcaccggttagcatttcccttaa 4537934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 11112688 - 11112638
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccct 193  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  11112688 ctttttcatatccttaaccagtgtcccggatgcaccagttagcatttccct 11112638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 194
Target Start/End: Original strand, 27988636 - 27988687
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccctt 194  Q
    |||||| |||||||||||||||| |||||||||||| |||||||||||||||    
T  27988636 ctttttcatatccttaaccagtgccccggaggcaccggttagcatttccctt 27988687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 194
Target Start/End: Original strand, 28045938 - 28045989
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccctt 194  Q
    |||||| |||||||||||||||| |||||||||||| |||||||||||||||    
T  28045938 ctttttcatatccttaaccagtgccccggaggcaccggttagcatttccctt 28045989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 2490334 - 2490386
Alignment:
Q  151 tatccttaaccagtgtcccggaggcaccagttagcatttcccttaaaatataa 203  Q
    ||||||||||| ||| |||||||||||| ||||||||||||||||||| ||||    
T  2490334 tatccttaacctgtgccccggaggcaccggttagcatttcccttaaaaaataa 2490386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 9278261 - 9278209
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccctta 195  Q
    |||||| ||||| ||||| |||||||| |||||||||||||||||||||||||    
T  9278261 ctttttcatatctttaacgagtgtccctgaggcaccagttagcatttccctta 9278209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 33357266 - 33357318
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccctta 195  Q
    |||||| ||||||||||||||||  |||| |||||||||||||||||||||||    
T  33357266 ctttttcatatccttaaccagtgctccgggggcaccagttagcatttccctta 33357318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 194
Target Start/End: Complemental strand, 168515 - 168464
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccctt 194  Q
    |||||| ||| |||||||||||| |||||||||||| |||||||||||||||    
T  168515 ctttttcatacccttaaccagtgccccggaggcaccggttagcatttccctt 168464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 190
Target Start/End: Original strand, 20831690 - 20831737
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttc 190  Q
    |||||| |||||||||||||||||||||| |||||| |||||||||||    
T  20831690 ctttttcatatccttaaccagtgtcccgggggcaccggttagcatttc 20831737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 30675709 - 30675766
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttcccttaaaata 200  Q
    |||||| ||| |||||||||||| ||||| |||||| ||||||||||||| |||||||    
T  30675709 ctttttcatacccttaaccagtgccccgggggcaccggttagcatttcccataaaata 30675766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 199
Target Start/End: Complemental strand, 16785134 - 16785080
Alignment:
Q  144 ttttttatatccttaaccagtgtcccggaggcaccagttagcatttcccttaaaat 199  Q
    ||||| |||||||||||||||| || |||| |||| ||||||||||||||||||||    
T  16785134 tttttcatatccttaaccagtgccctggag-caccggttagcatttcccttaaaat 16785080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 16394197 - 16394247
Alignment:
Q  142 tcttttttatatccttaaccagtgtcccggaggcaccagttagcatttccc 192  Q
    ||||||| | |||||||||||||| ||||| |||||| |||||||||||||    
T  16394197 tctttttcacatccttaaccagtgccccgggggcaccggttagcatttccc 16394247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 39751617 - 39751667
Alignment:
Q  151 tatccttaaccagtgtcccggaggcaccagttagcatttcccttaaaatat 201  Q
    ||||||||||||||| ||||| |||||| ||||||||||||| ||| ||||    
T  39751617 tatccttaaccagtgccccgggggcaccggttagcatttcccataatatat 39751667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 192
Target Start/End: Original strand, 2805397 - 2805446
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccc 192  Q
    |||||| |||||||||||||||||||||| |||||  |||| ||||||||    
T  2805397 ctttttcatatccttaaccagtgtcccgggggcactggttaacatttccc 2805446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 200
Target Start/End: Complemental strand, 13643053 - 13643004
Alignment:
Q  151 tatccttaaccagtgtcccggaggcaccagttagcatttcccttaaaata 200  Q
    ||||||||||||||| ||||| |||||| |||||||||| |||| |||||    
T  13643053 tatccttaaccagtgccccgggggcaccggttagcattttcctttaaata 13643004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 200
Target Start/End: Complemental strand, 13743478 - 13743429
Alignment:
Q  151 tatccttaaccagtgtcccggaggcaccagttagcatttcccttaaaata 200  Q
    ||||||||||||||| ||||| |||||| |||||||||| |||| |||||    
T  13743478 tatccttaaccagtgccccgggggcaccggttagcattttcctttaaata 13743429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 34228731 - 34228682
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccc 192  Q
    |||||| |||||||||||||||| ||| | |||||| |||||||||||||    
T  34228731 ctttttcatatccttaaccagtgcccccggggcaccggttagcatttccc 34228682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 37373254 - 37373206
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccc 192  Q
    |||||| ||||||||||||||||| |||| |||||| |||||||||||||    
T  37373254 ctttttcatatccttaaccagtgt-ccgggggcaccggttagcatttccc 37373206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 7261990 - 7261954
Alignment:
Q  154 ccttaaccagtgtcccggaggcaccagttagcatttc 190  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  7261990 ccttaaccagtgtcccggaggcaccggttaacatttc 7261954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 10618068 - 10618012
Alignment:
Q  142 tcttttttatatccttaaccagtgtcccggaggcaccagttagcatttcccttaaaa 198  Q
    ||||||| |||||||||||| ||| ||  |||||||| |||||||||| ||||||||    
T  10618068 tctttttcatatccttaacctgtgccctagaggcaccggttagcattttccttaaaa 10618012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 32217094 - 32217040
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttcccttaaa 197  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||    
T  32217094 cttttttatatccttaaccagtgccccgggggcaccagttagcatttcccataaa 32217040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 43944556 - 43944504
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccctta 195  Q
    |||||| ||| |||||||||||| |||||||||||| ||||||||||||||||    
T  43944556 ctttttcatacccttaaccagtgccccggaggcaccggttagcatttccctta 43944504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 144 - 200
Target Start/End: Original strand, 46688348 - 46688404
Alignment:
Q  144 ttttttatatccttaaccagtgtcccggaggcaccagttagcatttcccttaaaata 200  Q
    ||||| |||||||||||||||| | ||| ||||||||||||||||||||||| ||||    
T  46688348 tttttcatatccttaaccagtgcctcgggggcaccagttagcatttcccttataata 46688404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 193
Target Start/End: Original strand, 10110147 - 10110189
Alignment:
Q  151 tatccttaaccagtgtcccggaggcaccagttagcatttccct 193  Q
    ||||||||| |||||||||||||||||| ||||||||||||||    
T  10110147 tatccttaatcagtgtcccggaggcaccggttagcatttccct 10110189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 16572623 - 16572679
Alignment:
Q  141 ctcttttttatatccttaaccagtgtcccggaggcaccagttagcatttcccttaaa 197  Q
    ||||||||  ||||||||||||||| | |||||||||| |||||||||| |||||||    
T  16572623 ctctttttattatccttaaccagtgcctcggaggcaccggttagcattttccttaaa 16572679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 29591231 - 29591187
Alignment:
Q  150 atatccttaaccagtgtcccggaggcaccagttagcatttccctt 194  Q
    |||| ||||||||||| ||||| ||||||||||||||||||||||    
T  29591231 atattcttaaccagtgccccgggggcaccagttagcatttccctt 29591187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 143 - 194
Target Start/End: Complemental strand, 15186292 - 15186241
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccctt 194  Q
    |||||| ||| |||||||||||| ||||| |||||| |||||||||||||||    
T  15186292 ctttttcatacccttaaccagtgccccgggggcaccggttagcatttccctt 15186241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 151 - 190
Target Start/End: Original strand, 22225891 - 22225930
Alignment:
Q  151 tatccttaaccagtgtcccggaggcaccagttagcatttc 190  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  22225891 tatccttaaccagtgtcccgggggcaccggttagcatttc 22225930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 143 - 198
Target Start/End: Original strand, 43202520 - 43202575
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttcccttaaaa 198  Q
    |||||| ||| ||||||| |||| ||||| |||||| |||||||||||||||||||    
T  43202520 ctttttcatacccttaactagtgccccgggggcaccggttagcatttcccttaaaa 43202575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 143 - 194
Target Start/End: Original strand, 52533922 - 52533973
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccctt 194  Q
    |||||| |||| |||||||||||||| ||||||||| |||| ||||||||||    
T  52533922 ctttttcatattcttaaccagtgtcctggaggcaccggttaacatttccctt 52533973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 4268959 - 4269009
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccct 193  Q
    |||||| ||| |||||||||||| ||||| |||||| ||||||||||||||    
T  4268959 ctttttcatacccttaaccagtgccccgggggcaccggttagcatttccct 4269009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 18068016 - 18068066
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccct 193  Q
    |||||| ||| |||||||||||| ||||| |||||| ||||||||||||||    
T  18068016 ctttttcatacccttaaccagtgccccgggggcaccggttagcatttccct 18068066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 192
Target Start/End: Complemental strand, 54897350 - 54897308
Alignment:
Q  150 atatccttaaccagtgtcccggaggcaccagttagcatttccc 192  Q
    |||||||||||||||| ||||| |||||| |||||||||||||    
T  54897350 atatccttaaccagtgccccgggggcaccggttagcatttccc 54897308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 194
Target Start/End: Original strand, 12701917 - 12701958
Alignment:
Q  153 tccttaaccagtgtcccggaggcaccagttagcatttccctt 194  Q
    ||||||||||||| ||||| ||||||||||| ||||||||||    
T  12701917 tccttaaccagtgccccgggggcaccagttaacatttccctt 12701958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 16536097 - 16536040
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttcccttaaaata 200  Q
    |||||| ||| |||||| | ||| ||||| |||||| |||||||||||||||||||||    
T  16536097 ctttttcatacccttaatccgtgccccgggggcaccggttagcatttcccttaaaata 16536040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 32202617 - 32202674
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttcccttaaaata 200  Q
    ||||||||||||||||||| ||| ||||| | |||| |||| |||||||| |||||||    
T  32202617 cttttttatatccttaacccgtgccccggggacaccggttaacatttcccataaaata 32202674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 55882732 - 55882683
Alignment:
Q  144 ttttttatatccttaaccagtgtcccggaggcaccagttagcatttccct 193  Q
    ||||| ||||||||||| |||| ||||||| |||| ||||||||||||||    
T  55882732 tttttcatatccttaacgagtgccccggagacaccggttagcatttccct 55882683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 8133783 - 8133732
Alignment:
Q  142 tcttttttatatccttaaccagtgtcccggaggcaccagttagcatttccctt 194  Q
    ||||||| ||||||||||||||||||| ||| | ||| |||||||||||||||    
T  8133783 tctttttcatatccttaaccagtgtccgggaag-accggttagcatttccctt 8133732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 12356293 - 12356241
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccctta 195  Q
    |||||| ||||||||||||||| || | | |||||| ||||||||||||||||    
T  12356293 ctttttcatatccttaaccagtatctcaggggcaccggttagcatttccctta 12356241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 33108821 - 33108861
Alignment:
Q  155 cttaaccagtgtcccggaggcaccagttagcatttccctta 195  Q
    ||||||||||| |||||||||||| |||| |||||||||||    
T  33108821 cttaaccagtgccccggaggcaccggttaacatttccctta 33108861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 34606310 - 34606261
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccc 192  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  34606310 ctttttcatatccttaaccagtgccccggaggcaccagttagcatttccc 34606261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 143 - 189
Target Start/End: Original strand, 11686461 - 11686507
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcattt 189  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||    
T  11686461 cttttttatatccttaaccagtatcccggaagcaccagttagcattt 11686507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 18830493 - 18830407
Alignment:
Q  16 tataagctagcatttgaagcttttgcgttaacgt-gtgagttgt-gtgattttatggaaaacgtggtttgtataacacagaagcaaa 100  Q
    |||||| |||||||||||| |||||||||||||| ||||| ||| || |||||||||||||||||||||  | ||| ||||||||||    
T  18830493 tataagttagcatttgaagtttttgcgttaacgtggtgagctgtcgtaattttatggaaaacgtggtttacaaaacgcagaagcaaa 18830407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 192
Target Start/End: Original strand, 47118101 - 47118150
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccc 192  Q
    |||||| ||||| |||||||||| ||||||||||||||||||||||||||    
T  47118101 ctttttcatatctttaaccagtgccccggaggcaccagttagcatttccc 47118150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 18486003 - 18485955
Alignment:
Q  150 atatccttaaccagtgtcccggaggcaccagttagcatttcccttaaaa 198  Q
    |||||||||||||||| ||||| |||||| |||||||||||||||||||    
T  18486003 atatccttaaccagtgccccgggggcaccggttagcatttcccttaaaa 18485955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 8071437 - 8071524
Alignment:
Q  19 aagctagcatttgaagcttttgcgttaacgt-gtgagttg-tgtgattttatggaaaacgtggtttgtataacacagaagcaaacatg 104  Q
    |||||||||||||||||||||| |||||||| ||||||||   || ||||||||||||||||||||| | ||  || |||||||||||    
T  8071437 aagctagcatttgaagcttttgggttaacgtggtgagttgccatggttttatggaaaacgtggtttgcacaatgcaaaagcaaacatg 8071524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 190
Target Start/End: Complemental strand, 22973646 - 22973600
Alignment:
Q  144 ttttttatatccttaaccagtgtcccggaggcaccagttagcatttc 190  Q
    ||||||||||| |||||||||| ||||||||||| ||||||||||||    
T  22973646 ttttttatatcattaaccagtgccccggaggcactagttagcatttc 22973600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 7689337 - 7689394
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttcccttaaaata 200  Q
    ||||||||||||||||| ||||||||| ||| |||| |||| |||||||||| |||||    
T  7689337 cttttttatatccttaatcagtgtcccagagacaccggttaacatttccctttaaata 7689394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 192
Target Start/End: Original strand, 43594173 - 43594222
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccc 192  Q
    |||||||||||||||||||||||| |||| | |||| |||||||||||||    
T  43594173 cttttttatatccttaaccagtgttccggggacaccggttagcatttccc 43594222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 27456257 - 27456304
Alignment:
Q  150 atatccttaaccagtgtcccggaggcaccagttagcatttcccttaaaa 198  Q
    |||||||||||||||| ||||| ||||||||||||||||||||| ||||    
T  27456257 atatccttaaccagtg-cccgggggcaccagttagcatttccctaaaaa 27456304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 34333333 - 34333281
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccctta 195  Q
    |||||| ||| |||||||||||| ||||| |||||| ||||||||||||||||    
T  34333333 ctttttcatacccttaaccagtgccccgggggcaccggttagcatttccctta 34333281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 34557036 - 34557083
Alignment:
Q  151 tatccttaaccagtgtcccggaggcaccagttagcatttcccttaaaat 199  Q
    |||||||||||| || ||||| |||||||||||||||||||||||||||    
T  34557036 tatccttaaccaatgccccgg-ggcaccagttagcatttcccttaaaat 34557083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 143 - 194
Target Start/End: Original strand, 29993624 - 29993675
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccctt 194  Q
    |||||| |||||||||||| ||| ||||| |||||| |||||||||||||||    
T  29993624 ctttttcatatccttaaccggtgccccgggggcacccgttagcatttccctt 29993675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 38128430 - 38128489
Alignment:
Q  144 ttttttatatccttaaccagtgtcccggaggcaccagttagcatttcccttaaaatataa 203  Q
    |||||| ||| ||||||||||| |||||||||||| ||||||||  ||||| ||||||||    
T  38128430 ttttttgtatgcttaaccagtgccccggaggcaccggttagcatgaccctttaaatataa 38128489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 197
Target Start/End: Original strand, 12218573 - 12218627
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttcccttaaa 197  Q
    |||||| |||| |||| |||||| ||||| |||||| ||||||||||||||||||    
T  12218573 ctttttcatatacttatccagtgccccgggggcaccggttagcatttcccttaaa 12218627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 189
Target Start/End: Complemental strand, 28262080 - 28262034
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcattt 189  Q
    |||||| |||||||||||| ||| |||||||||||| ||||||||||    
T  28262080 ctttttcatatccttaaccggtgacccggaggcaccggttagcattt 28262034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 37631679 - 37631729
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccct 193  Q
    ||||||||||||||||||| ||| |||||| ||||| |||| |||||||||    
T  37631679 cttttttatatccttaacccgtgccccggaagcaccggttaacatttccct 37631729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 186
Target Start/End: Complemental strand, 21869439 - 21869406
Alignment:
Q  153 tccttaaccagtgtcccggaggcaccagttagca 186  Q
    ||||||||||||| ||||||||||||||||||||    
T  21869439 tccttaaccagtgacccggaggcaccagttagca 21869406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 47657030 - 47656981
Alignment:
Q  142 tcttttttatatccttaaccagtgtcccggaggcaccagttagcatttcc 191  Q
    ||||||| |||||||||||||||| ||| || ||||| ||||||||||||    
T  47657030 tctttttcatatccttaaccagtgcccccgaagcaccggttagcatttcc 47656981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 1737028 - 1736980
Alignment:
Q  144 ttttttatatccttaaccagtgtcccggaggcaccagttagcatttccc 192  Q
    ||||| |||||||||||||||| ||| || ||||| |||||||||||||    
T  1737028 tttttcatatccttaaccagtgccccagaagcaccggttagcatttccc 1736980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 195
Target Start/End: Complemental strand, 6097377 - 6097333
Alignment:
Q  151 tatccttaaccagtgtcccggaggcaccagttagcatttccctta 195  Q
    ||||||||||||||| ||||| |||| | ||||||||||||||||    
T  6097377 tatccttaaccagtgccccgggggcatcggttagcatttccctta 6097333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 195
Target Start/End: Complemental strand, 20402430 - 20402386
Alignment:
Q  151 tatccttaaccagtgtcccggaggcaccagttagcatttccctta 195  Q
    |||||||||||| |||||||| | |||| ||||||||||||||||    
T  20402430 tatccttaaccaatgtcccggggacaccggttagcatttccctta 20402386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 28587958 - 28587911
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttcc 191  Q
    |||||| ||||||||||||||||| |||| |||||| ||||||||||||    
T  28587958 ctttttcatatccttaaccagtgt-ccgggggcaccggttagcatttcc 28587911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 68428 - 68480
Alignment:
Q  144 ttttttatatccttaaccagtgtcccggaggcaccagttagcatttcccttaa 196  Q
    ||||| |||||||||||||||| ||||| ||||||||||||||||||||||||    
T  68428 tttttcatatccttaaccagtgccccgggggcaccagttagcatttcccttaa 68480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 30486259 - 30486207
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccctta 195  Q
    |||||| |||||||||||||||| ||||| |||||||||||||||||||||||    
T  30486259 ctttttcatatccttaaccagtgccccgggggcaccagttagcatttccctta 30486207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 31390061 - 31390009
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccctta 195  Q
    |||||| ||||||||||| |||| |||||||||||||||||||||||||||||    
T  31390061 ctttttcatatccttaactagtgccccggaggcaccagttagcatttccctta 31390009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 26891800 - 26891850
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccct 193  Q
    ||||||||||||||||| ||||||||||| |||||| ||||||||||||||    
T  26891800 cttttttatatccttaatcagtgtcccgggggcaccggttagcatttccct 26891850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 156 - 196
Target Start/End: Complemental strand, 20252776 - 20252736
Alignment:
Q  156 ttaaccagtgtcccggaggcaccagttagcatttcccttaa 196  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  20252776 ttaaccagtgtcacggaggcaccagttagcatttcccttaa 20252736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 194
Target Start/End: Original strand, 561655 - 561706
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccctt 194  Q
    |||||| |||||||||||||||| ||||| |||||| |||||||||||||||    
T  561655 ctttttcatatccttaaccagtgccccgggggcaccggttagcatttccctt 561706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 1859210 - 1859161
Alignment:
Q  144 ttttttatatccttaaccagtgtcccggaggcaccagttagcatttccct 193  Q
    ||||||||||||||||||| |  ||||| |||||||||||||||||||||    
T  1859210 ttttttatatccttaaccattaccccgggggcaccagttagcatttccct 1859161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 154 - 199
Target Start/End: Original strand, 35851917 - 35851962
Alignment:
Q  154 ccttaaccagtgtcccggaggcaccagttagcatttcccttaaaat 199  Q
    |||||||||||| ||||| |||||| ||||||||||||||||||||    
T  35851917 ccttaaccagtgccccgggggcaccggttagcatttcccttaaaat 35851962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 44587951 - 44587902
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccc 192  Q
    ||||||||||||||||||| ||| ||||| |||||| |||||||||||||    
T  44587951 cttttttatatccttaaccggtgccccgggggcaccggttagcatttccc 44587902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 22068456 - 22068508
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccctta 195  Q
    |||||| |||||||||||||||| ||||| |||||  ||||||||||||||||    
T  22068456 ctttttcatatccttaaccagtgccccgggggcacttgttagcatttccctta 22068508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 153 - 196
Target Start/End: Complemental strand, 20363953 - 20363910
Alignment:
Q  153 tccttaaccagtgtcccggaggcaccagttagcatttcccttaa 196  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||||    
T  20363953 tccttaaccagtgtcacgggggcactagttagcatttcccttaa 20363910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 32361005 - 32361056
Alignment:
Q  142 tcttttttatatccttaaccagtgtcccggaggcaccagttagcatttccct 193  Q
    ||||||| | |||||||||||||| ||||| |||||| ||||||||||||||    
T  32361005 tctttttcacatccttaaccagtgccccgggggcaccggttagcatttccct 32361056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 199
Target Start/End: Original strand, 35470367 - 35470413
Alignment:
Q  153 tccttaaccagtgtcccggaggcaccagttagcatttcccttaaaat 199  Q
    ||||||||||||| |||||||||||| |||| ||||||||| |||||    
T  35470367 tccttaaccagtgccccggaggcaccggttaacatttccctaaaaat 35470413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 20552980 - 20552931
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccc 192  Q
    |||||| |||||||||||||||| ||| | |||||| |||||||||||||    
T  20552980 ctttttcatatccttaaccagtgcccccggggcaccggttagcatttccc 20552931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 22887798 - 22887749
Alignment:
Q  144 ttttttatatccttaaccagtgtcccggaggcaccagttagcatttccct 193  Q
    ||||| ||||||||||||| || |||||||||| | ||||||||||||||    
T  22887798 tttttcatatccttaaccactgccccggaggcatcggttagcatttccct 22887749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 31438695 - 31438646
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccc 192  Q
    |||||| |||||||||||||||| |||||  ||||| |||||||||||||    
T  31438695 ctttttcatatccttaaccagtgccccgggagcaccggttagcatttccc 31438646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 26387201 - 26387253
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccctta 195  Q
    |||||| ||||||||||| |||    |||||||||||||||||||||||||||    
T  26387201 ctttttcatatccttaacaagtacttcggaggcaccagttagcatttccctta 26387253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 194
Target Start/End: Complemental strand, 35132571 - 35132520
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccctt 194  Q
    |||||| |||||||||||||||||||||| |||||| |||||||||||||||    
T  35132571 ctttttcatatccttaaccagtgtcccgggggcaccggttagcatttccctt 35132520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 2619693 - 2619742
Alignment:
Q  142 tcttttttatatccttaaccagtgtcccggaggcaccagttagcatttcc 191  Q
    ||||||| ||||||||||| |||||||||||| |||||||||||||||||    
T  2619693 tctttttcatatccttaacaagtgtcccggagacaccagttagcatttcc 2619742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 10054489 - 10054548
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttcccttaaaatata 202  Q
    |||||| ||| |||||||||||| ||||| |||||| ||||||||||||||||| |||||    
T  10054489 ctttttcatacccttaaccagtgccccgggggcaccggttagcatttcccttaatatata 10054548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 194
Target Start/End: Original strand, 21945006 - 21945049
Alignment:
Q  151 tatccttaaccagtgtcccggaggcaccagttagcatttccctt 194  Q
    ||||||||||||||| |||||||||||| |||||||||||||||    
T  21945006 tatccttaaccagtgccccggaggcaccggttagcatttccctt 21945049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 10070018 - 10069969
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccc 192  Q
    |||||| |||||||||||||||| ||||| |||||| |||||||||||||    
T  10070018 ctttttcatatccttaaccagtgccccgggggcaccggttagcatttccc 10069969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 192
Target Start/End: Original strand, 35504377 - 35504426
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccc 192  Q
    |||||| ||| |||||||||||||||||| |||||| |||||||||||||    
T  35504377 ctttttcatacccttaaccagtgtcccgggggcaccggttagcatttccc 35504426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 143 - 194
Target Start/End: Complemental strand, 13470200 - 13470149
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccctt 194  Q
    |||||| |||||||||||||||| |||  ||||||| |||||||||||||||    
T  13470200 ctttttcatatccttaaccagtgccccataggcaccggttagcatttccctt 13470149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 143 - 194
Target Start/End: Complemental strand, 13661857 - 13661806
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccctt 194  Q
    |||||| ||||||||||||||||  |||| |||||| |||||||||||||||    
T  13661857 ctttttcatatccttaaccagtgctccgggggcaccggttagcatttccctt 13661806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 192
Target Start/End: Complemental strand, 6283612 - 6283562
Alignment:
Q  142 tcttttttatatccttaaccagtgtcccggaggcaccagttagcatttccc 192  Q
    ||||||| ||||| ||||| |||| |||||||||||| |||||||||||||    
T  6283612 tctttttcatatctttaactagtgccccggaggcaccggttagcatttccc 6283562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 193
Target Start/End: Complemental strand, 10955988 - 10955950
Alignment:
Q  155 cttaaccagtgtcccggaggcaccagttagcatttccct 193  Q
    ||||||||||| |||||||||| ||||||||||||||||    
T  10955988 cttaaccagtgccccggaggcaacagttagcatttccct 10955950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 192
Target Start/End: Original strand, 11958104 - 11958153
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccc 192  Q
    |||||||||||| |||||| ||| ||||| |||||| |||||||||||||    
T  11958104 cttttttatatctttaacctgtgccccgggggcaccggttagcatttccc 11958153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 40608681 - 40608722
Alignment:
Q  151 tatccttaaccagtgtcccggaggcaccagttagcatttccc 192  Q
    |||||||||||||||||||||  ||||| |||||||||||||    
T  40608681 tatccttaaccagtgtcccgggagcaccggttagcatttccc 40608722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 201
Target Start/End: Complemental strand, 8950228 - 8950180
Alignment:
Q  153 tccttaaccagtgtcccggaggcaccagttagcatttcccttaaaatat 201  Q
    |||||||| |||||||||||| ||||||||| |||||||| ||| ||||    
T  8950228 tccttaactagtgtcccggagacaccagttaacatttcccgtaatatat 8950180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 20175275 - 20175223
Alignment:
Q  144 ttttttatatccttaaccagtgtcccggaggcaccagttagcatttcccttaa 196  Q
    ||||||||||  |||||||||||| ||||| |||| |||||||||||| ||||    
T  20175275 ttttttatatttttaaccagtgtctcggagacaccggttagcatttccattaa 20175223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 39069428 - 39069376
Alignment:
Q  145 tttttatatccttaaccagtgtcccggaggcaccagttagcatttcccttaaa 197  Q
    |||| ||| |||||||||||| || ||| ||||| ||||||||||||||||||    
T  39069428 ttttcatacccttaaccagtgccctggaagcaccggttagcatttcccttaaa 39069376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 25768 - 25719
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccc 192  Q
    |||||| |||||||||||| || |||| ||||||||||||||||||||||    
T  25768 ctttttcatatccttaacccgtatcccagaggcaccagttagcatttccc 25719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 143 - 194
Target Start/End: Complemental strand, 23010 - 22959
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccctt 194  Q
    |||||| ||||||||||||||||  |||| |||||| |||||||||||||||    
T  23010 ctttttcatatccttaaccagtgctccgggggcaccggttagcatttccctt 22959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 11107 - 11155
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccct 193  Q
    |||||| |||||||||||||||||||  | |||||||||||||||||||||    
T  11107 ctttttcatatccttaaccagtgtcc--ggggcaccagttagcatttccct 11155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 53822 - 53872
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccct 193  Q
    |||||| ||| |||||||||||| ||||| |||||| ||||||||||||||    
T  53822 ctttttcatacccttaaccagtgccccgggggcaccggttagcatttccct 53872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 50597 - 50548
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttccc 192  Q
    |||||| ||||| |||||||||| |||||||||||| |||| ||||||||    
T  50597 ctttttcatatctttaaccagtgccccggaggcaccggttaacatttccc 50548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 14944 - 14896
Alignment:
Q  144 ttttttatatccttaaccagtgtcccggaggcaccagttagcatttccc 192  Q
    ||||||||||| |||||||||| ||||| | |||| |||||||||||||    
T  14944 ttttttatatctttaaccagtgccccggggacaccggttagcatttccc 14896  T

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Target: scaffold0188 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 191
Target Start/End: Original strand, 6247 - 6295
Alignment:
Q  143 cttttttatatccttaaccagtgtcccggaggcaccagttagcatttcc 191  Q
    |||||| |||||||||||||||| ||| | |||||| ||||||||||||    
T  6247 ctttttcatatccttaaccagtgccccaggggcaccggttagcatttcc 6295  T

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