View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6063_high_37 (Length: 318)
Name: NF6063_high_37
Description: NF6063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6063_high_37 |
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Alignment Details
Target: chr3 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 30354535 - 30354836
Alignment:
| Q |
1 |
aaaaaacgccattatactttttagaacaaacaaacacaattttggaggaaaaaactcttaactcaattcaaaacccaataaaaagaagagaaacatgaag |
100 |
Q |
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| T |
30354535 |
aaaaaacgccattatactttttagaacaaacaaacacaattttggagaaaaaaactcttaactcaattcaaaatccaataaaaagaagagaaacatgaag |
30354634 |
T |
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| Q |
101 |
aagagaaaggtaaatataaggttttgatggaacgtgggaagaagaagaaaattacagggtaaaaaagagagagcaagaaggtgaagagctgaggaggcca |
200 |
Q |
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| T |
30354635 |
aagagaaaggtaaatataaggttttgatggaacgtgggaagaagaagaaaattacagggtaaaaaagagagagcaagaaggtgaagagctgaggaggcca |
30354734 |
T |
|
| Q |
201 |
aggtgtgaacaaatatttaaaaaccctaattggaaagaaaatggaaggagaataagagatattcagcatctgaaactgagaaaacaaatcgctagactca |
300 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
30354735 |
aggtgtgaacaaatatttaaaaaccctaactggaaagaaaatggaaggagaataagagatattcagcatctgaaactgagaaaacaaatctctagactca |
30354834 |
T |
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| Q |
301 |
aa |
302 |
Q |
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|| |
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| T |
30354835 |
aa |
30354836 |
T |
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