View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6063_low_10 (Length: 471)

Name: NF6063_low_10
Description: NF6063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6063_low_10
NF6063_low_10
[»] chr3 (37 HSPs)
chr3 (1-452)||(40194160-40194612)
chr3 (60-188)||(10366714-10366842)
chr3 (60-207)||(17652656-17652802)
chr3 (50-197)||(36476497-36476644)
chr3 (50-213)||(38137501-38137664)
chr3 (32-207)||(39043794-39043966)
chr3 (60-207)||(11905726-11905872)
chr3 (46-215)||(36460467-36460636)
chr3 (60-215)||(19822906-19823061)
chr3 (60-203)||(43253928-43254072)
chr3 (60-206)||(38795247-38795394)
chr3 (57-215)||(12904759-12904917)
chr3 (50-203)||(27471242-27471395)
chr3 (50-207)||(30190715-30190872)
chr3 (50-111)||(45710849-45710910)
chr3 (60-217)||(29024030-29024182)
chr3 (50-190)||(44301481-44301622)
chr3 (51-207)||(49447847-49448004)
chr3 (50-124)||(11632067-11632141)
chr3 (50-195)||(33491414-33491561)
chr3 (50-173)||(41038448-41038571)
chr3 (60-121)||(37695731-37695792)
chr3 (142-207)||(37773113-37773178)
chr3 (81-125)||(24703647-24703691)
chr3 (50-121)||(14194545-14194615)
chr3 (60-111)||(23004447-23004498)
chr3 (60-123)||(34750483-34750546)
chr3 (48-119)||(41351617-41351688)
chr3 (50-112)||(28690837-28690899)
chr3 (133-195)||(37311864-37311926)
chr3 (63-121)||(37497481-37497539)
chr3 (60-121)||(3901214-3901275)
chr3 (40-101)||(24569145-24569206)
chr3 (165-214)||(30682234-30682283)
chr3 (60-112)||(19611907-19611959)
chr3 (50-110)||(40462319-40462379)
chr3 (59-111)||(54726484-54726536)
[»] chr2 (33 HSPs)
chr2 (39-213)||(36354485-36354658)
chr2 (59-214)||(35242359-35242514)
chr2 (46-121)||(17346411-17346486)
chr2 (47-207)||(9458316-9458475)
chr2 (50-219)||(25637371-25637541)
chr2 (59-219)||(3323334-3323494)
chr2 (60-207)||(14523435-14523582)
chr2 (39-197)||(34225503-34225661)
chr2 (46-188)||(37322351-37322492)
chr2 (46-125)||(26863407-26863486)
chr2 (150-212)||(27501637-27501700)
chr2 (39-197)||(34120481-34120637)
chr2 (60-203)||(35313794-35313937)
chr2 (51-217)||(17695220-17695389)
chr2 (60-218)||(16463579-16463739)
chr2 (50-187)||(39785508-39785645)
chr2 (68-207)||(7494909-7495049)
chr2 (240-298)||(15492264-15492322)
chr2 (53-121)||(19937374-19937442)
chr2 (62-187)||(5272204-5272328)
chr2 (39-209)||(34451377-34451544)
chr2 (60-125)||(5789711-5789776)
chr2 (145-209)||(17122894-17122957)
chr2 (46-183)||(28186141-28186278)
chr2 (60-111)||(15359150-15359201)
chr2 (50-125)||(39329717-39329791)
chr2 (145-207)||(11742677-11742739)
chr2 (143-209)||(16377801-16377867)
chr2 (133-207)||(34120657-34120731)
chr2 (60-125)||(16807758-16807823)
chr2 (60-125)||(16847039-16847104)
chr2 (63-112)||(18202103-18202152)
chr2 (32-116)||(18853236-18853320)
[»] chr7 (41 HSPs)
chr7 (60-207)||(759163-759310)
chr7 (60-195)||(21350697-21350833)
chr7 (60-203)||(11373500-11373643)
chr7 (50-190)||(19271795-19271934)
chr7 (60-172)||(24516361-24516473)
chr7 (60-188)||(34947429-34947557)
chr7 (60-207)||(28202381-28202528)
chr7 (60-207)||(43873833-43873980)
chr7 (60-197)||(2459391-2459528)
chr7 (50-207)||(6494996-6495152)
chr7 (50-215)||(25571322-25571486)
chr7 (50-125)||(26974018-26974093)
chr7 (62-124)||(7463206-7463268)
chr7 (60-206)||(13961872-13962016)
chr7 (62-125)||(22738693-22738756)
chr7 (50-121)||(30865963-30866034)
chr7 (143-197)||(47045620-47045674)
chr7 (47-121)||(49101659-49101733)
chr7 (50-111)||(3178266-3178327)
chr7 (60-213)||(8592512-8592666)
chr7 (60-206)||(9785899-9786045)
chr7 (50-111)||(32018978-32019039)
chr7 (50-196)||(34100609-34100755)
chr7 (50-111)||(41506127-41506188)
chr7 (50-125)||(5524369-5524447)
chr7 (60-207)||(83294-83442)
chr7 (60-207)||(21390204-21390352)
chr7 (64-207)||(21760060-21760203)
chr7 (50-173)||(37245634-37245757)
chr7 (133-207)||(40076228-40076302)
chr7 (50-111)||(23670492-23670553)
chr7 (40-101)||(35333059-35333120)
chr7 (40-123)||(17610896-17610979)
chr7 (50-125)||(29835476-29835550)
chr7 (50-125)||(46478355-46478430)
chr7 (133-207)||(16560706-16560780)
chr7 (133-207)||(16604882-16604956)
chr7 (60-125)||(28103725-28103790)
chr7 (50-111)||(32018774-32018835)
chr7 (146-207)||(38391662-38391723)
chr7 (133-177)||(24166930-24166974)
[»] chr4 (49 HSPs)
chr4 (50-207)||(38405163-38405321)
chr4 (60-207)||(16821402-16821550)
chr4 (39-217)||(2066684-2066860)
chr4 (46-175)||(2653355-2653484)
chr4 (50-207)||(49428403-49428559)
chr4 (50-188)||(5841488-5841627)
chr4 (60-207)||(11907670-11907817)
chr4 (133-215)||(42517790-42517872)
chr4 (60-187)||(47773090-47773217)
chr4 (50-125)||(32884786-32884861)
chr4 (60-207)||(26147686-26147836)
chr4 (50-188)||(47464426-47464565)
chr4 (46-205)||(10754280-10754437)
chr4 (46-205)||(10968049-10968206)
chr4 (60-125)||(17237367-17237432)
chr4 (50-207)||(42616964-42617120)
chr4 (50-125)||(51624771-51624846)
chr4 (59-125)||(6643730-6643796)
chr4 (60-187)||(17114363-17114490)
chr4 (46-111)||(18741531-18741596)
chr4 (60-121)||(22130032-22130093)
chr4 (60-121)||(33790802-33790863)
chr4 (60-121)||(35311294-35311355)
chr4 (46-219)||(18532070-18532243)
chr4 (59-212)||(7061734-7061889)
chr4 (50-125)||(34360640-34360715)
chr4 (60-187)||(49176005-49176132)
chr4 (46-124)||(35998798-35998875)
chr4 (61-215)||(36985683-36985835)
chr4 (50-124)||(53412094-53412168)
chr4 (60-125)||(2942715-2942780)
chr4 (60-121)||(21240775-21240836)
chr4 (60-197)||(35380404-35380542)
chr4 (46-111)||(38502539-38502604)
chr4 (50-111)||(47359010-47359071)
chr4 (151-187)||(30192176-30192212)
chr4 (50-110)||(38663508-38663568)
chr4 (60-112)||(44526377-44526429)
chr4 (147-209)||(35251799-35251862)
chr4 (145-215)||(53412001-53412072)
chr4 (150-196)||(25734780-25734826)
chr4 (133-175)||(29295161-29295203)
chr4 (60-117)||(11288700-11288757)
chr4 (61-187)||(25233105-25233230)
chr4 (137-186)||(48914284-48914333)
chr4 (134-217)||(16411524-16411610)
chr4 (143-203)||(40123009-40123069)
chr4 (40-124)||(43902237-43902321)
chr4 (143-187)||(52859948-52859992)
[»] chr1 (45 HSPs)
chr1 (60-214)||(31042693-31042847)
chr1 (50-203)||(39864018-39864171)
chr1 (62-203)||(6785163-6785304)
chr1 (46-187)||(9379155-9379296)
chr1 (50-203)||(14757652-14757804)
chr1 (60-173)||(20209908-20210021)
chr1 (59-203)||(24991720-24991865)
chr1 (63-125)||(9307612-9307674)
chr1 (50-173)||(37506061-37506184)
chr1 (48-121)||(2137425-2137498)
chr1 (46-123)||(27896942-27897019)
chr1 (81-214)||(35682883-35683012)
chr1 (143-214)||(6160601-6160673)
chr1 (50-207)||(16395105-16395260)
chr1 (63-219)||(37539020-37539174)
chr1 (50-125)||(44707818-44707893)
chr1 (50-120)||(8896390-8896460)
chr1 (59-121)||(10495828-10495890)
chr1 (50-173)||(33733320-33733443)
chr1 (60-121)||(2572458-2572519)
chr1 (50-188)||(24880794-24880936)
chr1 (60-124)||(35367788-35367852)
chr1 (50-121)||(7759204-7759275)
chr1 (143-206)||(30755093-30755155)
chr1 (46-121)||(52429333-52429408)
chr1 (62-124)||(22856307-22856369)
chr1 (60-187)||(49224054-49224181)
chr1 (50-208)||(34031585-34031743)
chr1 (143-215)||(52837177-52837250)
chr1 (50-106)||(6023707-6023763)
chr1 (60-173)||(12039019-12039132)
chr1 (59-111)||(25089153-25089205)
chr1 (60-111)||(15699121-15699172)
chr1 (150-205)||(29074786-29074840)
chr1 (143-214)||(30437700-30437771)
chr1 (63-121)||(4441674-4441732)
chr1 (46-108)||(32219715-32219777)
chr1 (133-217)||(37238924-37239004)
chr1 (133-207)||(43500881-43500955)
chr1 (50-111)||(917023-917084)
chr1 (60-121)||(37276450-37276511)
chr1 (144-219)||(6365543-6365616)
chr1 (61-121)||(13579690-13579750)
chr1 (60-173)||(28748928-28749041)
chr1 (143-207)||(38787241-38787305)
[»] chr8 (34 HSPs)
chr8 (39-208)||(17719303-17719472)
chr8 (37-215)||(26626155-26626333)
chr8 (50-195)||(11976992-11977137)
chr8 (60-203)||(44761560-44761701)
chr8 (53-189)||(17823843-17823978)
chr8 (134-207)||(40996501-40996574)
chr8 (60-173)||(9300179-9300294)
chr8 (60-207)||(32678319-32678453)
chr8 (59-207)||(39405665-39405813)
chr8 (60-121)||(31082608-31082669)
chr8 (50-111)||(42886999-42887060)
chr8 (40-111)||(29226574-29226645)
chr8 (142-217)||(32476181-32476256)
chr8 (59-195)||(34948752-34948886)
chr8 (96-195)||(50731-50830)
chr8 (50-177)||(10180003-10180130)
chr8 (60-117)||(10098057-10098114)
chr8 (60-203)||(21216167-21216309)
chr8 (60-215)||(39482507-39482665)
chr8 (46-125)||(45425718-45425797)
chr8 (60-207)||(39301022-39301169)
chr8 (50-188)||(13335139-13335276)
chr8 (50-125)||(4428407-4428482)
chr8 (143-177)||(396760-396794)
chr8 (59-125)||(7172899-7172965)
chr8 (50-112)||(27294115-27294177)
chr8 (142-215)||(41091894-41091965)
chr8 (183-217)||(42886885-42886919)
chr8 (39-124)||(4924112-4924197)
chr8 (46-119)||(32476278-32476351)
chr8 (249-298)||(38076759-38076808)
chr8 (46-123)||(43719288-43719365)
chr8 (143-203)||(10953881-10953941)
chr8 (143-203)||(10961886-10961946)
[»] chr5 (33 HSPs)
chr5 (50-208)||(6753711-6753869)
chr5 (50-207)||(6315830-6315987)
chr5 (46-121)||(7827975-7828050)
chr5 (60-207)||(40899821-40899968)
chr5 (50-207)||(27542698-27542855)
chr5 (40-123)||(4441008-4441091)
chr5 (60-203)||(8698215-8698359)
chr5 (60-207)||(19929849-19929996)
chr5 (39-121)||(21060619-21060701)
chr5 (60-173)||(40530287-40530401)
chr5 (60-173)||(41496017-41496130)
chr5 (41-207)||(3348174-3348341)
chr5 (50-173)||(15818535-15818658)
chr5 (50-111)||(6754028-6754089)
chr5 (60-203)||(4818457-4818601)
chr5 (40-111)||(11796210-11796281)
chr5 (50-207)||(1248657-1248814)
chr5 (50-121)||(27580589-27580660)
chr5 (50-105)||(29856052-29856107)
chr5 (37-75)||(6535992-6536030)
chr5 (151-213)||(6833367-6833429)
chr5 (46-124)||(22848433-22848511)
chr5 (50-124)||(29374328-29374402)
chr5 (50-124)||(29570378-29570452)
chr5 (145-215)||(38161855-38161925)
chr5 (142-207)||(2588208-2588273)
chr5 (71-173)||(10598214-10598316)
chr5 (46-79)||(24455010-24455043)
chr5 (60-125)||(31655038-31655103)
chr5 (143-207)||(6753932-6753996)
chr5 (68-120)||(30512757-30512809)
chr5 (68-120)||(30553097-30553149)
chr5 (82-122)||(41492248-41492288)
[»] chr6 (21 HSPs)
chr6 (46-125)||(34657612-34657691)
chr6 (39-207)||(32440688-32440858)
chr6 (51-203)||(3720296-3720448)
chr6 (60-207)||(11656010-11656158)
chr6 (150-218)||(22398235-22398303)
chr6 (60-124)||(31894274-31894338)
chr6 (60-207)||(29363207-29363356)
chr6 (39-215)||(1063646-1063818)
chr6 (39-111)||(3291811-3291883)
chr6 (62-123)||(15046111-15046171)
chr6 (50-123)||(15058104-15058177)
chr6 (142-207)||(21010074-21010139)
chr6 (60-125)||(24983513-24983578)
chr6 (1-40)||(1063584-1063623)
chr6 (50-121)||(33510129-33510200)
chr6 (50-79)||(13206886-13206915)
chr6 (50-111)||(13909423-13909484)
chr6 (50-111)||(17828939-17829000)
chr6 (162-214)||(21804691-21804744)
chr6 (143-187)||(27367246-27367290)
chr6 (143-187)||(27457593-27457637)
[»] scaffold0095 (1 HSPs)
scaffold0095 (59-207)||(50107-50255)
[»] scaffold0110 (2 HSPs)
scaffold0110 (143-207)||(1459-1523)
scaffold0110 (61-121)||(1693-1753)
[»] scaffold0328 (1 HSPs)
scaffold0328 (60-204)||(8046-8191)
[»] scaffold0330 (1 HSPs)
scaffold0330 (60-118)||(5382-5440)
[»] scaffold0159 (1 HSPs)
scaffold0159 (60-125)||(34084-34149)
[»] scaffold0068 (1 HSPs)
scaffold0068 (162-214)||(56557-56610)
[»] scaffold0464 (1 HSPs)
scaffold0464 (133-217)||(5939-6022)
[»] scaffold0016 (1 HSPs)
scaffold0016 (74-190)||(76212-76328)
[»] scaffold0011 (1 HSPs)
scaffold0011 (58-124)||(14231-14297)


Alignment Details
Target: chr3 (Bit Score: 363; Significance: 0; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 1 - 452
Target Start/End: Complemental strand, 40194612 - 40194160
Alignment:
Q  1 ttaaagtttatgtatgatttataagaaaatgattaattgtattaattattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaat 100  Q
    ||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  40194612 ttaaagtttgtatatgatttataaaaaaatgattaattgtattaattattaaaatactcttattaattgtagttagtggcgtagttgagttggaagaaat 40194513  T
Q  101 ttaataaataaagatataatagtggnnnnnnn-taatgaatactgcattggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaa 199  Q
    |||||||||||||||||||||||||        ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40194512 ttaataaataaagatataatagtggaaaaaaaataatgaatactacattgatattctaaattgacaattattttaagacagagaaaaaatgataaagaaa 40194413  T
Q  200 caattattttaagacgaaggtcgcatgatttttaaagtccttttggtctaaatcatcacatttcaagtcttttcaaccgccaaacataatgtaaggtcga 299  Q
    ||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40194412 caattattttaagacgaagatcacatgatttttaaagtctttttggtctaaatcatcacatttcaagtcttttcaaccgccaaacataatgtaaggtcga 40194313  T
Q  300 tgttgtttttcattaatttgannnnnnncctgggtgtttaacttgttcaaattatataattggaaccaatttgtttatcgttttagattatataatattc 399  Q
    |||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  40194312 tgttgtttttcattaatttgatttttttcctgggtgtttaacttgttcaaattatataattggaaccaaattgtttatcgttttagattatataatattc 40194213  T
Q  400 tctgaacatgttcaagatgtgctgaaaacaaacttttgttgatttttatattt 452  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40194212 tctgaacatgttcaagatgtgctgaaaacaaacttttgttgatttttatattt 40194160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 60 - 188
Target Start/End: Original strand, 10366714 - 10366842
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaa 159  Q
    |||||||||||||||||||  |||||| ||||||| |||||| ||||||||| | ||||||| |||       |||| |||  |||||||||||||||||    
T  10366714 ttattaattgtagttagtgaagtagttaagttggatgaaattcaataaataagggtataataatgggaaaaaataataaatgttgcattggtattctaaa 10366813  T
Q  160 ttgacaattattttaagacagagaaaaaa 188  Q
     ||||||||||||| ||| | ||||||||    
T  10366814 gtgacaattattttgagaaaaagaaaaaa 10366842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 60 - 207
Target Start/End: Complemental strand, 17652802 - 17652656
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaa 159  Q
    |||||||||||||||||||  |||||| ||||||| |||||||||||||||| | ||||||| | |       | || |||||||||||  |||||||||    
T  17652802 ttattaattgtagttagtgaggtagttaagttggatgaaatttaataaataagggtataataattgaaaaaatt-ataaatactgcattaatattctaaa 17652704  T
Q  160 ttgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
     ||||||||||||| ||| | |||||| ||| |||||| |||||||||    
T  17652703 gtgacaattattttgagaaaaagaaaagatggtaaagagacaattatt 17652656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 50 - 197
Target Start/End: Complemental strand, 36476644 - 36476497
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattg 149  Q
    ||||||||  |||||||||||||||||| | |||||| |||| || |||||| ||||||||| | ||||||| | |       |||| ||| ||||||||    
T  36476644 taaaatacccttattaattgtagttagtagagtagttaagtttgatgaaattcaataaataagggtataataatagaaaaaagtaataaatgctgcattg 36476545  T
Q  150 gtattctaaattgacaattattttaagacagagaaaaaatgataaaga 197  Q
    |||||||||| ||||||||||||| ||| | | |||||||| ||||||    
T  36476544 gtattctaaagtgacaattattttgagaaaaataaaaaatgttaaaga 36476497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 50 - 213
Target Start/End: Original strand, 38137501 - 38137664
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattg 149  Q
    ||||||| | ||||||| |||||||||||| |||||| | || || |||||| |||||||||||||||||||||||       |||| |||| ||||||     
T  38137501 taaaatattcttattaactgtagttagtggggtagttaaattcgatgaaattcaataaataaagatataatagtggaaaataataataaatattgcatta 38137600  T
Q  150 gtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattattttaaga 213  Q
    |||||  ||| ||||||||||||| | | | |||||||||   ||||||||||| ||| |||||    
T  38137601 gtattgcaaagtgacaattattttgaaaaaaagaaaaaatataaaagaaacaataattgtaaga 38137664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 32 - 207
Target Start/End: Original strand, 39043794 - 39043966
Alignment:
Q  32 attaattgtattaattattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnn 131  Q
    |||||| |||| | ||| |||||||| ||||||||||||||||||||| |||||| ||||| | |||||| ||||||||| | ||||||| ||           
T  39043794 attaatagtatcatttactaaaatacctttattaattgtagttagtggagtagttaagttgaatgaaattcaataaataagggtataataatg--aaaaa 39043891  T
Q  132 ntaatgaatactgcattggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
     |||| |||  ||||||||||||||||| ||||||||| ||| ||| | ||| |||||| |||||| |||||||||    
T  39043892 ataataaatgttgcattggtattctaaagtgacaatta-tttcagaaaaagagaaaatgctaaagagacaattatt 39043966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 60 - 207
Target Start/End: Complemental strand, 11905872 - 11905726
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaa 159  Q
    |||||||||||||||| ||| || ||| ||||||| |||||| ||||||||||||||||||| |||       |||| |||  ||||||| |||||||||    
T  11905872 ttattaattgtagttaatggagttgttaagttggatgaaattcaataaataaagatataataatgg-aaaaaataataaatgttgcattgatattctaaa 11905774  T
Q  160 ttgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
     | | ||||||||||||| | |||||||  |||||||||| |||||||    
T  11905773 ataaaaattattttaagaaaaagaaaaatggataaagaaataattatt 11905726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 46 - 215
Target Start/End: Original strand, 36460467 - 36460636
Alignment:
Q  46 ttattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgc 145  Q
    ||||||||||| | |||||||||||||||| ||| ||| || ||||||| |||||| ||||||||| | |||||||||||       |||| |||| |||    
T  36460467 ttattaaaatattcttattaattgtagttaatggagtaattaagttggatgaaattcaataaataagggtataatagtggaaacaaataataaatattgc 36460566  T
Q  146 attggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattattttaagacg 215  Q
    |||| |||  |||| ||||||||||||| ||| | | ||||| ||  ||||| ||||| ||| |||||||    
T  36460567 attgatatcgtaaagtgacaattattttgagaaaaataaaaattgcaaaagagacaataattataagacg 36460636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 60 - 215
Target Start/End: Complemental strand, 19823061 - 19822906
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaa 159  Q
    ||||||||||||||||||||  ||||| ||||||| |||||| ||||||||| | |||| || ||        |||| ||| ||||||||||||||||||    
T  19823061 ttattaattgtagttagtggaatagttaagttggatgaaattcaataaataagggtatattaatg-aaaaaaataataaatgctgcattggtattctaaa 19822963  T
Q  160 t-tgacaattattttaagacagagaaaaaatgataaagaaacaattattttaagacg 215  Q
      ||||||||||||| ||| | |||||||||  |||||| ||||||||| |||||||    
T  19822962 agtgacaattattttgagaaaaagaaaaaattgtaaagagacaattattgtaagacg 19822906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 60 - 203
Target Start/End: Original strand, 43253928 - 43254072
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtgg-nnnnnnntaatgaatactgcattggtattctaa 158  Q
    |||||||||||||||||||| |||||| ||| ||| |||||| | ||||||| | |||||||||||        |||| |||  |||||||||||| |||    
T  43253928 ttattaattgtagttagtggagtagttaagtgggatgaaattcattaaataagggtataatagtggaaaaaaactaataaatgttgcattggtattgtaa 43254027  T
Q  159 attgacaattattttaagacagagaaaaaatgataaagaaacaat 203  Q
    | ||||||||||||| ||| | |||||||||| |||||| |||||    
T  43254028 agtgacaattattttgagaaatagaaaaaatgctaaagagacaat 43254072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 60 - 206
Target Start/End: Complemental strand, 38795394 - 38795247
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaa 159  Q
    ||||||||||||||| |||| || ||| ||||||| ||||||||||||| || |  ||||||||||        |   |||| |||||||||||||||||    
T  38795394 ttattaattgtagttggtggagttgttaagttggatgaaatttaataaaaaagggcataatagtggaaaataaaataaaatattgcattggtattctaaa 38795295  T
Q  160 ttgacaattattttaagacagag-aaaaaatgataaagaaacaattat 206  Q
     ||||||||||||| ||||| || |||||||| |||||| ||||||||    
T  38795294 gtgacaattattttgagacaaagaaaaaaatgctaaagagacaattat 38795247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 57 - 215
Target Start/End: Complemental strand, 12904917 - 12904759
Alignment:
Q  57 cttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattct 156  Q
    ||||||||||||||||||||||| ||| || ||||||| |||||| ||||||||| | |||||||||||        ||| ||  || |||| ||||| |    
T  12904917 cttttattaattgtagttagtggagtaattaagttggatgaaattcaataaataagggtataatagtggaaaaaaaaaataaaagctccattagtattat 12904818  T
Q  157 aaattgacaattattttaagacagagaaaaaatgataaagaaacaattattttaagacg 215  Q
    ||||| ||||||||||| ||||  | |||| ||   ||||||||||||||||| |||||    
T  12904817 aaattaacaattattttgagactaaaaaaatattccaaagaaacaattattttgagacg 12904759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 50 - 203
Target Start/End: Complemental strand, 27471395 - 27471242
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattg 149  Q
    ||||| ||| ||||||||| ||  |||||| |||||| ||||| | |||||| ||||||||||| |||  ||||||       |||| ||| ||| ||||    
T  27471395 taaaacactcttattaattataagtagtggagtagttaagttgaatgaaattcaataaataaaggtatggtagtggacaaaaataataaatgctgtattg 27471296  T
Q  150 gtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaat 203  Q
    ||||| |||| ||||||||||||| ||| | |||||||||| |||||| |||||    
T  27471295 gtattataaagtgacaattattttgagaaaaagaaaaaatgctaaagagacaat 27471242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 50 - 207
Target Start/End: Original strand, 30190715 - 30190872
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattg 149  Q
    ||||||||  |||||||||||||||||||| |||||| ||||||| |||||| ||| ||||| | || |||| |||       |||| |||  | ||||     
T  30190715 taaaatacccttattaattgtagttagtggagtagttaagttggatgaaattcaattaataagggtaaaataatggaaattaataataaatgttacattt 30190814  T
Q  150 gtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
     ||||||||| ||||||||||||| ||| | ||||||| || |||||| |||||||||    
T  30190815 ttattctaaagtgacaattattttgagaaaaagaaaaagtgctaaagagacaattatt 30190872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 50 - 111
Target Start/End: Complemental strand, 45710910 - 45710849
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataa 111  Q
    ||||| |||||||||||||||||||||||| |||||| ||||||| ||| || |||||||||    
T  45710910 taaaacacttttattaattgtagttagtggagtagttaagttggatgaagttcaataaataa 45710849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 217
Target Start/End: Original strand, 29024030 - 29024182
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaa 159  Q
    |||||||||||||||||||| ||| || ||||||| |||||| ||||||||| | ||||||| |||        ||  ||| || ||||| |||||||||    
T  29024030 ttattaattgtagttagtggagtaattaagttggatgaaattcaataaataatggtataataatggaaa-----aaaaaatgctacattgatattctaaa 29024124  T
Q  160 ttgacaattattttaagacagagaaaaaatgataaagaaacaattattttaagacgaa 217  Q
     ||||||||||||||||| | ||||||   | |||||| ||||||||| | |||||||    
T  29024125 gtgacaattattttaagaaaaagaaaattgggtaaagagacaattattgtgagacgaa 29024182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 44301622 - 44301481
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtgg-nnnnnnntaatgaatactgcatt 148  Q
    ||||||||  |||| ||||||| ||||||| |||||| ||||||| |||||| |||||||||   |||||||||||        |||| |||  ||||||    
T  44301622 taaaatacccttatcaattgtaattagtggagtagttaagttggatgaaattcaataaataagagtataatagtggaaaaatattaataaatgttgcatt 44301523  T
Q  149 ggtattctaaattgacaattattttaagacagagaaaaaatg 190  Q
    | |||| |||| ||||||||||||| ||| ||||||||||||    
T  44301522 gatattataaagtgacaattattttgagaaagagaaaaaatg 44301481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 51 - 207
Target Start/End: Original strand, 49447847 - 49448004
Alignment:
Q  51 aaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnnta-atgaatactgcattg 149  Q
    |||||||  |||||||||||||||||| |  ||||| | || || |||||||||||||||| | ||||||||| |       || || |||| |||||||    
T  49447847 aaaatacccttattaattgtagttagtagaatagttaaatttgatgaaatttaataaataagggtataatagtagaaaaaaatatataaatagtgcattg 49447946  T
Q  150 gtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
     | ||||||| |||||  |||||| | |||||||||||||| ||||| ||||||||||    
T  49447947 attttctaaagtgacagctattttgaaacagagaaaaaatgttaaaggaacaattatt 49448004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 124
Target Start/End: Complemental strand, 11632141 - 11632067
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtg 124  Q
    ||||| || |||||||||||||||||||||   |||| ||||||| |||||| ||||||||||  ||||||||||    
T  11632141 taaaacacctttattaattgtagttagtggaaaagttaagttggatgaaattcaataaataaaagtataatagtg 11632067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 195
Target Start/End: Original strand, 33491414 - 33491561
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaattt-aataaataaagatataatagtg-gnnnnnnntaatgaatactgcat 147  Q
    ||||| ||| ||||||||| |||||||||| |||||| ||||| | ||||||| ||||||||| | |||||||||| |       | || |||||| |||    
T  33491414 taaaacactcttattaattatagttagtggagtagttaagttgtatgaaattttaataaataagggtataatagtgcgaaaaaaatcataaatactacat 33491513  T
Q  148 tggtattctaaattgacaattattttaagacagagaaaaaatgataaa 195  Q
    | ||||| |||| ||||||||||||| ||| | |||||||||| ||||    
T  33491514 tagtattgtaaagtgacaattattttgagaaaaagaaaaaatgttaaa 33491561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 173
Target Start/End: Original strand, 41038448 - 41038571
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattg 149  Q
    ||||||||| |||||||||||||||| ||  |||||| ||||||  ||| || ||||||||| ||||| ||| |||       |||| ||| |||||||     
T  41038448 taaaatactcttattaattgtagttaatgaagtagttaagttggttgaagttcaataaataaggatattataatggaaaaaaataataaatgctgcattt 41038547  T
Q  150 gtattctaaattgacaattatttt 173  Q
    ||||| |||| |||||||||||||    
T  41038548 gtattttaaagtgacaattatttt 41038571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 121
Target Start/End: Original strand, 37695731 - 37695792
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataata 121  Q
    |||||||||||||||||||| |||||| |||| || |||||| ||||||||| | |||||||    
T  37695731 ttattaattgtagttagtggagtagttaagttagatgaaattcaataaataagggtataata 37695792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 142 - 207
Target Start/End: Original strand, 37773113 - 37773178
Alignment:
Q  142 ctgcattggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
    ||||||||||||| |||| ||||||||||||| ||| | ||||||| || |||||| |||||||||    
T  37773113 ctgcattggtattgtaaagtgacaattattttgagaaaaagaaaaattgctaaagagacaattatt 37773178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 24703691 - 24703647
Alignment:
Q  81 gtagttgagttggaagaaatttaataaataaagatataatagtgg 125  Q
    |||||| ||||||| |||||| |||||||||||||||||||||||    
T  24703691 gtagttaagttggatgaaattcaataaataaagatataatagtgg 24703647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 121
Target Start/End: Complemental strand, 14194615 - 14194545
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataata 121  Q
    |||||||||||||| |||||| |||||||| ||| || ||||||| |||||| ||| ||||||| |||||||    
T  14194615 taaaatacttttatgaattgt-gttagtggagtaattaagttggatgaaattcaattaataaaggtataata 14194545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 23004447 - 23004498
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataa 111  Q
    |||||||||||||||||||| |||||| ||||| | |||||| |||||||||    
T  23004447 ttattaattgtagttagtggagtagttaagttgtatgaaattcaataaataa 23004498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 34750546 - 34750483
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagt 123  Q
    ||||||||||||||| |||| |||||| | ||||| |||| ||||||||||| | |||||||||    
T  34750546 ttattaattgtagttggtggagtagttaacttggatgaaaattaataaataatggtataatagt 34750483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 119
Target Start/End: Original strand, 41351617 - 41351688
Alignment:
Q  48 attaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataa 119  Q
    ||||||||  ||||||||||  |||||||||| |||||| ||||| | |||||| ||||||||||| |||||    
T  41351617 attaaaattattttattaatgatagttagtggagtagttaagttgaatgaaattcaataaataaaggtataa 41351688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 28690837 - 28690899
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaa 112  Q
    |||||||  ||||||||||||||||||||   ||||| ||||||| |||||| ||||||||||    
T  28690837 taaaatatctttattaattgtagttagtgagatagttaagttggatgaaattcaataaataaa 28690899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 195
Target Start/End: Complemental strand, 37311926 - 37311864
Alignment:
Q  133 taatgaatactgcattggtattctaaattgacaattattttaagacagagaaaaaatgataaa 195  Q
    |||| ||| |||||||| |||| |||| ||||||||||||||||| | |||||||||| ||||    
T  37311926 taataaatgctgcattgatattgtaaagtgacaattattttaagaaaaagaaaaaatgttaaa 37311864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 121
Target Start/End: Complemental strand, 37497539 - 37497481
Alignment:
Q  63 ttaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataata 121  Q
    |||| |||||||||||| |||||| ||||||| |||||| ||||||||||  |||||||    
T  37497539 ttaactgtagttagtggagtagttaagttggatgaaattcaataaataaacgtataata 37497481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 121
Target Start/End: Original strand, 3901214 - 3901275
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataata 121  Q
    |||||| ||||||||||||| ||| || ||||||| |||||| ||||||||| | |||||||    
T  3901214 ttattagttgtagttagtggggtacttaagttggatgaaattcaataaataagggtataata 3901275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 101
Target Start/End: Original strand, 24569145 - 24569206
Alignment:
Q  40 tattaattattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatt 101  Q
    ||||| ||| ||||||||  |||||||||||||||||||| |||||| ||||| | ||||||    
T  24569145 tattatttactaaaatacccttattaattgtagttagtggagtagttaagttgaatgaaatt 24569206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 30682234 - 30682283
Alignment:
Q  165 aattattttaagacagagaaaaaatgataaagaaacaattattttaagac 214  Q
    ||||||||| |||||||||||||||| |||||| |||||| |||| ||||    
T  30682234 aattattttgagacagagaaaaaatgttaaagatacaattcttttgagac 30682283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 19611959 - 19611907
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaa 112  Q
    ||||||||||| |||||||| |||||| |||| || |||||| ||||||||||    
T  19611959 ttattaattgttgttagtggagtagttaagtttgatgaaattcaataaataaa 19611907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 50 - 110
Target Start/End: Complemental strand, 40462379 - 40462319
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaata 110  Q
    |||||||||||| ||||||||||||||  | |||||| |||||||  ||||| ||||||||    
T  40462379 taaaatacttttgttaattgtagttagaagagtagttaagttggataaaattcaataaata 40462319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 59 - 111
Target Start/End: Complemental strand, 54726536 - 54726484
Alignment:
Q  59 tttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataa 111  Q
    ||||||||||||||||| ||| |||||| |||| || ||| ||||||||||||    
T  54726536 tttattaattgtagttaatggagtagttaagttagatgaagtttaataaataa 54726484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 4e-33; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 39 - 213
Target Start/End: Original strand, 36354485 - 36354658
Alignment:
Q  39 gtattaattattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatga 138  Q
    |||||| ||||| ||| ||| |||||||||||||||||||| |||||| ||||||| |||||| ||||||||| | ||||||| |||       |||| |    
T  36354485 gtattatttattgaaacactcttattaattgtagttagtggagtagttaagttggatgaaattcaataaataatggtataataatggaaaaaa-taataa 36354583  T
Q  139 atactgcattggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattattttaaga 213  Q
    || |||||||||||||||||| ||||||||||||| ||| | ||||||||||||||||| ||||||||| |||||    
T  36354584 attctgcattggtattctaaagtgacaattattttgagaaaaagaaaaaatgataaagagacaattattgtaaga 36354658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 59 - 214
Target Start/End: Original strand, 35242359 - 35242514
Alignment:
Q  59 tttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaa 158  Q
    ||||||||||||||||||| | |||||| ||||||| |||||| ||||||||||  ||||||||||        |||| |||| ||||||||||||||||    
T  35242359 tttattaattgtagttagttgagtagttaagttggatgaaattcaataaataaaagtataatagtgaaaactaataataaatattgcattggtattctaa 35242458  T
Q  159 attgacaattattttaagacagagaaaaaatgataaagaaacaattattttaagac 214  Q
    | | | || |||||| ||||| |||||||||  |||||| ||||||||||||||||    
T  35242459 agttataactattttcagacatagaaaaaatattaaagacacaattattttaagac 35242514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 46 - 121
Target Start/End: Original strand, 17346411 - 17346486
Alignment:
Q  46 ttattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataata 121  Q
    ||||||||||| |||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||| |||||    
T  17346411 ttattaaaatatttttattaattgtagttagtggagtagttaagttggaagaaattcaataaataaagatgtaata 17346486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 47 - 207
Target Start/End: Original strand, 9458316 - 9458475
Alignment:
Q  47 tattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgca 146  Q
    |||||||| ||  |||||||||||||||||||| |||||  ||||||| |||||||||||||||| | ||||||| |||       |||| ||| |||||    
T  9458316 tattaaaacacccttattaattgtagttagtggagtagtaaagttggatgaaatttaataaataagggtataataatgg-aaaaaataataaatgctgca 9458414  T
Q  147 ttggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
    ||||||||||||| ||||||||||||| ||| | | |||||  | ||||||||||||||||    
T  9458415 ttggtattctaaagtgacaattattttgagaaaaataaaaatgggtaaagaaacaattatt 9458475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 50 - 219
Target Start/End: Complemental strand, 25637541 - 25637371
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnn-taatgaatactgcatt 148  Q
    ||||| || |||||||||||||||||  || |||||| ||||||| |||||||||||||||| | | ||||| |||        |||| ||| |||||||    
T  25637541 taaaacacctttattaattgtagttataggagtagttaagttggatgaaatttaataaataagggtgtaataatggaaaaaaaataataaatgctgcatt 25637442  T
Q  149 ggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattattttaagacgaagg 219  Q
    ||||||||||| ||||||||||||| ||| | || ||||||| |||||| ||||||||| | |||||||||    
T  25637441 ggtattctaaagtgacaattattttgagaaaaagtaaaaatggtaaagagacaattattgtgagacgaagg 25637371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 59 - 219
Target Start/End: Original strand, 3323334 - 3323494
Alignment:
Q  59 tttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaa 158  Q
    ||||||||||||||||||||| |||||| ||||||| |||||| ||||| |||   | |||||||||       |||| ||| ||||||||||||| |||    
T  3323334 tttattaattgtagttagtggagtagttaagttggatgaaattcaataagtaagagtgtaatagtgggaaaaaataataaatgctgcattggtattgtaa 3323433  T
Q  159 attgacaattattttaagacagagaaaaaatgataaagaaacaattattttaagacgaagg 219  Q
    | ||| ||||||||| ||| | |||||||||| |||||| ||||| ||| | |||||||||    
T  3323434 agtgagaattattttgagaaaaagaaaaaatgctaaagagacaataattatgagacgaagg 3323494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 60 - 207
Target Start/End: Original strand, 14523435 - 14523582
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaa 159  Q
    |||||||||||||||||||| |||||| |||| || |||||| ||| ||||| ||||||||| |||       |||| |||  ||||||| |||||||||    
T  14523435 ttattaattgtagttagtggagtagttaagttagatgaaattcaattaataaggatataataatggaaaataataataaatgttgcattgatattctaaa 14523534  T
Q  160 ttgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
     ||||||||||||| ||| | ||||||| || |||||| |||||||||    
T  14523535 gtgacaattattttgagaaaaagaaaaagtgttaaagagacaattatt 14523582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 39 - 197
Target Start/End: Complemental strand, 34225661 - 34225503
Alignment:
Q  39 gtattaattattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatga 138  Q
    |||||| ||| ||||| ||  |||||||||||||||| ||| ||| || ||||| | |||||||||||||||| | ||||||| ||        |||| |    
T  34225661 gtattatttactaaaacacccttattaattgtagttaatggagtatttaagttgaatgaaatttaataaataagggtataataatgaaaaaaaataataa 34225562  T
Q  139 atactgcattggtattctaaattgacaattattttaagacagagaaaaaatgataaaga 197  Q
    ||||||||||||||||| ||| ||||||||||||||| | | | |||||||||||||||    
T  34225561 atactgcattggtattccaaagtgacaattattttaaaaaaaataaaaaatgataaaga 34225503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 46 - 188
Target Start/End: Complemental strand, 37322492 - 37322351
Alignment:
Q  46 ttattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgc 145  Q
    ||||||||||||  |||||||||||||||||||| |||||| |||| || |||||| ||||||||| | ||||||| |||       |||| ||| || |    
T  37322492 ttattaaaatacccttattaattgtagttagtggagtagttaagttagatgaaattcaataaataagggtataataatgg-aaaaaataataaatgctac 37322394  T
Q  146 attggtattctaaattgacaattattttaagacagagaaaaaa 188  Q
    || ||||||||||| ||||||||||||| ||| | ||||||||    
T  37322393 ataggtattctaaagtgacaattattttgagaaaaagaaaaaa 37322351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 46 - 125
Target Start/End: Original strand, 26863407 - 26863486
Alignment:
Q  46 ttattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtgg 125  Q
    ||||||||| |||||||||||||||||||||||| |||||| ||| ||| |||||| | ||||||||  |||||||||||    
T  26863407 ttattaaaacacttttattaattgtagttagtggagtagttaagtcggatgaaattcattaaataaatgtataatagtgg 26863486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 150 - 212
Target Start/End: Original strand, 27501637 - 27501700
Alignment:
Q  150 gtattctaaattgacaattattttaagacagag-aaaaaatgataaagaaacaattattttaag 212  Q
    |||||||||| |||||||||||||||||||||| |||||||  |||||||||||||||||||||    
T  27501637 gtattctaaaatgacaattattttaagacagagaaaaaaatattaaagaaacaattattttaag 27501700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 197
Target Start/End: Original strand, 34120481 - 34120637
Alignment:
Q  39 gtattaattattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatga 138  Q
    |||||| ||| |||||||  |||||||||||||||||||||  ||||| ||||||| |||||| ||||| |||   ||||||| |||       |||| |    
T  34120481 gtattatttactaaaata--tttattaattgtagttagtggaatagttaagttggatgaaattcaataagtaagagtataataatggaaaaaaataataa 34120578  T
Q  139 atactgcattggtattctaaattgacaattattttaagacagagaaaaaatgataaaga 197  Q
    || ||||||||||||| |||| ||||||||||||| ||| | |||||| ||| ||||||    
T  34120579 atgctgcattggtattttaaagtgacaattattttgagaaaaagaaaagatggtaaaga 34120637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 60 - 203
Target Start/End: Complemental strand, 35313937 - 35313794
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaa 159  Q
    |||||||||||||||||||| |||||| |||| || |||||| |||||||||   |||||||||||       |||| |||  ||||||  |||| ||||    
T  35313937 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggaaaaaagtaataaatgttgcattattattgtaaa 35313838  T
Q  160 ttgacaattattttaagacagagaaaaaatgataaagaaacaat 203  Q
     ||||||||||||| ||| | |||||||||| |||||| |||||    
T  35313837 gtgacaattattttgagaaaaagaaaaaatgttaaagagacaat 35313794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 51 - 217
Target Start/End: Complemental strand, 17695389 - 17695220
Alignment:
Q  51 aaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtgg--nnnnnnntaatgaatactgcatt 148  Q
    |||||| | ||||||||| |||||||| | |||||| ||||||| |||||| ||||||||| | |||||||||||         |||| ||| |||||||    
T  17695389 aaaatattcttattaattatagttagtagagtagttaagttggatgaaattcaataaataagggtataatagtggaaaaaataataataaatgctgcatt 17695290  T
Q  149 ggtattctaaattgacaattattttaagacagag-aaaaaatgataaagaaacaattattttaagacgaa 217  Q
    | ||||||||| ||||||||||||| ||| | || |||||||| |||||| || |||||| | |||||||    
T  17695289 gatattctaaagtgacaattattttgagaaaaagaaaaaaatggtaaagagactattattgtgagacgaa 17695220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 60 - 218
Target Start/End: Complemental strand, 16463739 - 16463579
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnn--taatgaatactgcattggtattcta 157  Q
    |||||||||||||||||||| |||||  |||| || |||||||||||||||| | || |||| |||         |||| ||| ||||||||||||||||    
T  16463739 ttattaattgtagttagtggagtagtaaagtttgatgaaatttaataaataatggtaaaataatggaaaaaataataataaatgctgcattggtattcta 16463640  T
Q  158 aattgacaattattttaagacagagaaaaaatgataaagaaacaattattttaagacgaag 218  Q
    || ||||||||||||| ||| | | |||||  | |||||| ||||||||| | ||||||||    
T  16463639 aagtgacaattattttgagaaaaataaaaatgggtaaagagacaattattctgagacgaag 16463579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 50 - 187
Target Start/End: Complemental strand, 39785645 - 39785508
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattg 149  Q
    ||||| ||| |||||||||||||||| ||| |||||| ||||||| ||| || ||||||||| | ||| ||| |||       || | ||| ||||||||    
T  39785645 taaaacactcttattaattgtagttaatggagtagttaagttggatgaagttcaataaataagggtattataatgggaaaaaatagtaaatgctgcattg 39785546  T
Q  150 gtattctaaattgacaattattttaagacagagaaaaa 187  Q
    |||||||||| ||||||||||||| ||| | |||||||    
T  39785545 gtattctaaagtgacaattattttgagaaaaagaaaaa 39785508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 207
Target Start/End: Original strand, 7494909 - 7495049
Alignment:
Q  68 tgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnn-taatgaatactgcattggtattctaaattgacaa 166  Q
    ||||||||| || |||||| ||||||| |||||| ||||||||| | ||||||| ||         |||| ||| |||||||||||||||||| ||||||    
T  7494909 tgtagttagcggagtagttaagttggatgaaattcaataaataagggtataataatgaaaaaaaaataataaatgctgcattggtattctaaagtgacaa 7495008  T
Q  167 ttattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
    ||||||| ||| | |||||| ||| |||||| |||||||||    
T  7495009 ttattttgagaaaaagaaaagatggtaaagagacaattatt 7495049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 15492322 - 15492264
Alignment:
Q  240 ttttggtctaaatcatcacatttcaagtcttttcaaccgccaaacataatgtaaggtcg 298  Q
    |||||||| |||||||||||||||||| |||||||| | |||||||||| |||||||||    
T  15492322 ttttggtcaaaatcatcacatttcaagccttttcaaacaccaaacataaggtaaggtcg 15492264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 19937442 - 19937374
Alignment:
Q  53 aatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataata 121  Q
    |||||| |||||||||||||||||||| |||||| ||||| |  ||||| ||||||||||| |||||||    
T  19937442 aatactcttattaattgtagttagtggagtagttaagttgaataaaattcaataaataaaggtataata 19937374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 62 - 187
Target Start/End: Original strand, 5272204 - 5272328
Alignment:
Q  62 attaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaatt 161  Q
    |||||||||||||||||| ||| || | ||||| |||||| ||||||||| | ||||||| |||       |||| |||  |||||| |||||||||| |    
T  5272204 attaattgtagttagtggagtaattaaattggatgaaattcaataaataagggtataataatgggaaaaa-taataaatgttgcatttgtattctaaagt 5272302  T
Q  162 gacaattattttaagacagagaaaaa 187  Q
    |||||||||||||||| | |||||||    
T  5272303 gacaattattttaagaaaaagaaaaa 5272328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 209
Target Start/End: Original strand, 34451377 - 34451544
Alignment:
Q  39 gtattaattattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatga 138  Q
    |||||| ||| ||||||| ||| ||||||| |||||| ||   ||||| ||||||| |||||| |||||||||||  |||||| |||       |||       
T  34451377 gtattatttactaaaatattttcattaattctagttattgaaatagtttagttggatgaaattcaataaataaaggcataatactgggaaaaattaa--- 34451473  T
Q  139 atactgcattggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattatttt 209  Q
    ||  ||||||| ||||||||| ||||||||||||| ||| ||| |||||||  |||||| |||||||||||    
T  34451474 atgttgcattgatattctaaagtgacaattattttgagatagaaaaaaaatactaaagagacaattatttt 34451544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 125
Target Start/End: Original strand, 5789711 - 5789776
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtgg 125  Q
    |||||||||||||||||||   ||||| ||||||| |||||| ||||||||| | |||||||||||    
T  5789711 ttattaattgtagttagtgaaatagttaagttggatgaaattcaataaataatggtataatagtgg 5789776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 17122957 - 17122894
Alignment:
Q  145 cattggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattatttt 209  Q
    ||||| ||||||||| |||||||||||||||||||| ||||||||  |||||| |||||| ||||    
T  17122957 cattgatattctaaagtgacaattattttaagacag-gaaaaaatattaaagacacaattctttt 17122894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 183
Target Start/End: Complemental strand, 28186278 - 28186141
Alignment:
Q  46 ttattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgc 145  Q
    |||||||||||   ||||| ||| |||||||  | |||||| ||||| | |||||| |||||||||| | ||||||||||       |||| ||||||||    
T  28186278 ttattaaaatatccttattcattttagttagcagagtagttaagttgaatgaaattcaataaataaaaaaataatagtggaaaaatataattaatactgc 28186179  T
Q  146 attggtattctaaattgacaattattttaagacagaga 183  Q
    |||  |||| |||| ||||||||||||| |||| ||||    
T  28186178 atttatattataaagtgacaattattttgagacggaga 28186141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 15359150 - 15359201
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataa 111  Q
    |||||||||||||||||||| |||||| ||||||| ||| || |||||||||    
T  15359150 ttattaattgtagttagtggagtagttaagttggatgaagttcaataaataa 15359201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 39329717 - 39329791
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtgg 125  Q
    ||||| ||| |||||||||||||||| ||| |||||| | ||||| |||||| ||||||||| |||| ||||||||    
T  39329717 taaaacactcttattaattgtagtta-tggagtagttaaattggatgaaattcaataaataacgatacaatagtgg 39329791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 145 - 207
Target Start/End: Original strand, 11742677 - 11742739
Alignment:
Q  145 cattggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
    |||| |||||||||| ||||||||||||| ||| | |||||||  |||||||| |||||||||    
T  11742677 cattcgtattctaaagtgacaattattttgagaaaaagaaaaatagataaagatacaattatt 11742739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 209
Target Start/End: Original strand, 16377801 - 16377867
Alignment:
Q  143 tgcattggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattatttt 209  Q
    ||||||| ||||||||| ||||||||||||| | | |||||||||||| || | |||||||| ||||    
T  16377801 tgcattgatattctaaaatgacaattattttgaaaaagagaaaaaatgttagaaaaacaattttttt 16377867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 34120657 - 34120731
Alignment:
Q  133 taatgaatactgcattggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
    |||| ||| ||||||||||||| |||| ||||||||||||| ||| | |||||| ||| ||||||  ||||||||    
T  34120657 taataaatgctgcattggtattttaaagtgacaattattttgagaaaaagaaaagatggtaaagaggcaattatt 34120731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 125
Target Start/End: Complemental strand, 16807823 - 16807758
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtgg 125  Q
    |||||||| ||||||| | | || |||||||| || |||||| |||||||||||||||| ||||||    
T  16807823 ttattaatagtagttaatagagttgttgagttagatgaaattcaataaataaagatatattagtgg 16807758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 125
Target Start/End: Complemental strand, 16847104 - 16847039
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtgg 125  Q
    |||||||| ||||||| | | || |||||||| || |||||| |||||||||||||||| ||||||    
T  16847104 ttattaatagtagttaatagagttgttgagttagatgaaattcaataaataaagatatattagtgg 16847039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 112
Target Start/End: Complemental strand, 18202152 - 18202103
Alignment:
Q  63 ttaattgtagttagtggcgtagttgagttggaagaaatttaataaataaa 112  Q
    |||| |||||||||||  |||||| ||||||| |||||||||||||||||    
T  18202152 ttaaatgtagttagtgaagtagttaagttggatgaaatttaataaataaa 18202103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 18853236 - 18853320
Alignment:
Q  32 attaattgtattaattattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagata 116  Q
    ||||||||||| | |||  |||||||| |||||| ||||||||||| | ||| || | ||||| |||||| ||||||||| ||||    
T  18853236 attaattgtatcatttaccaaaatactcttattagttgtagttagtagagtaattaatttggatgaaattcaataaataaggata 18853320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 8e-25; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 60 - 207
Target Start/End: Original strand, 759163 - 759310
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaa 159  Q
    ||||||||||||||||| || |||||| ||||||| |||||| ||||||||| | ||||||| |||       |||| ||| ||||||||||||||||||    
T  759163 ttattaattgtagttagcggagtagttaagttggatgaaattcaataaataagggtataataatggaaaaaaataataaatgctgcattggtattctaaa 759262  T
Q  160 ttgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
     ||||||||||||| ||| | |||||| ||| |||||| |||||||||    
T  759263 gtgacaattattttgagaaaaagaaaagatggtaaagagacaattatt 759310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 60 - 195
Target Start/End: Original strand, 21350697 - 21350833
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtgg-nnnnnnntaatgaatactgcattggtattctaa 158  Q
    |||||||||||||||||||| |||||| ||||||| |||||| ||||||||| | |||||||||||        |||| ||| ||||||||||||| |||    
T  21350697 ttattaattgtagttagtggagtagttaagttggatgaaattcaataaataagggtataatagtggaaaaaaaataataaatgctgcattggtattgtaa 21350796  T
Q  159 attgacaattattttaagacagagaaaaaatgataaa 195  Q
    | ||||||||||||| ||| | |||||||||| ||||    
T  21350797 agtgacaattattttgagaaaaagaaaaaatgttaaa 21350833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 60 - 203
Target Start/End: Original strand, 11373500 - 11373643
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaa 159  Q
    |||||||||||||||||||| |||||| ||||||| |||||| |||||||||   |||||||||||       |||| ||| |||||||| |||| ||||    
T  11373500 ttattaattgtagttagtggagtagttaagttggatgaaattcaataaataagagtataatagtgggaaaaaataataaatgctgcattgatattgtaaa 11373599  T
Q  160 ttgacaattattttaagacagagaaaaaatgataaagaaacaat 203  Q
     | ||||||||||| ||| | |||||||||| |||||| |||||    
T  11373600 gtaacaattattttgagaaaaagaaaaaatggtaaagagacaat 11373643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 50 - 190
Target Start/End: Original strand, 19271795 - 19271934
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattg 149  Q
    |||||||||||||||||||||||||||||| |||||| ||||||| |||| ||||||||||| | ||||||| |||       |||| |||  |||||||    
T  19271795 taaaatacttttattaattgtagttagtggagtagttaagttggatgaaaattaataaataagggtataatattgg-aaaaaataataaatgttgcattg 19271893  T
Q  150 gtattctaaattgacaattattttaagacagagaaaaaatg 190  Q
    ||||| |||| | ||||||||||| ||| | ||||||||||    
T  19271894 gtattgtaaagtaacaattattttgagaaaaagaaaaaatg 19271934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 60 - 172
Target Start/End: Original strand, 24516361 - 24516473
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaa 159  Q
    |||||||||||||||||||| |||||| ||||||| |||||| |||||||||||||| ||||||||       |||| |||  ||||||| |||| ||||    
T  24516361 ttattaattgtagttagtggagtagttaagttggatgaaattcaataaataaagataaaatagtgggaaaagataataaatgttgcattgatattgtaaa 24516460  T
Q  160 ttgacaattattt 172  Q
     ||||||||||||    
T  24516461 atgacaattattt 24516473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 60 - 188
Target Start/End: Complemental strand, 34947557 - 34947429
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaa 159  Q
    |||||||||||||||||||| |||||| ||||||| |||||| ||||||| | | ||||||| |||       |||| |||  |||||||||||||||||    
T  34947557 ttattaattgtagttagtggagtagttaagttggatgaaattcaataaatgagggtataataatggaaaaaaataataaatgttgcattggtattctaaa 34947458  T
Q  160 ttgacaattattttaagacagagaaaaaa 188  Q
     ||||||||||||| ||| | ||||||||    
T  34947457 gtgacaattattttgagaaaaagaaaaaa 34947429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 60 - 207
Target Start/End: Original strand, 28202381 - 28202528
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaa 159  Q
    |||||||||||||||||||| |||||  ||||||| |||||| |||||||||   ||||||| |||       |||| ||| ||| ||||||||||||||    
T  28202381 ttattaattgtagttagtggagtagtaaagttggatgaaattcaataaataagagtataataatggaaaaaaataataaatgctgtattggtattctaaa 28202480  T
Q  160 ttgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
     ||||||||||||| ||| | | |||||  |||||||| |||||||||    
T  28202481 gtgacaattattttgagaaaaataaaaatggataaagagacaattatt 28202528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 60 - 207
Target Start/End: Complemental strand, 43873980 - 43873833
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaa 159  Q
    ||||||| |||||||||||| |||||| ||||||| ||| |||||||||||||  ||| ||| |||       |||| ||| |||||||| |||||||||    
T  43873980 ttattaaatgtagttagtggagtagttaagttggatgaagtttaataaataaatgtattataatgggaaaaaataataaatgctgcattgatattctaaa 43873881  T
Q  160 ttgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
     ||||||||||||| ||| | |||||||  |||||| | |||||||||    
T  43873880 gtgacaattattttgagaaaaagaaaaatggataaaaagacaattatt 43873833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 60 - 197
Target Start/End: Complemental strand, 2459528 - 2459391
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaa 159  Q
    |||||||||||||||||||| |||||| ||| ||| |||||| ||||||||| | ||||||||||        |||| ||| ||||||||||||| ||||    
T  2459528 ttattaattgtagttagtggagtagttaagtaggatgaaattcaataaataagggtataatagtgaaaaaaaataataaatgctgcattggtattgtaaa 2459429  T
Q  160 ttgacaattattttaagacagagaaaaaatgataaaga 197  Q
     || |||||||||| | | | |||||||||| ||||||    
T  2459428 gtgtcaattattttgaaaaaaagaaaaaatgctaaaga 2459391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 50 - 207
Target Start/End: Original strand, 6494996 - 6495152
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattg 149  Q
    ||||| |||||||||||||||||||||||| |||||  ||||||| |||||||||||||||| | ||||||| | |        ||| ||| || |||||    
T  6494996 taaaacacttttattaattgtagttagtggagtagtaaagttggatgaaatttaataaataagggtataataat-gaaaaaaaaaataaatgctacattg 6495094  T
Q  150 gtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
     ||||||||| ||||||||||||| ||| | |||||||  | |||||| |||||||||    
T  6495095 atattctaaagtgacaattattttgagaaaaagaaaaatgggtaaagagacaattatt 6495152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 50 - 215
Target Start/End: Complemental strand, 25571486 - 25571322
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattg 149  Q
    ||||||||  |||||| |||||||||||||  ||||| ||||||| |||||| ||||||||| | ||||||| |         |||| |||  |||||||    
T  25571486 taaaatacccttattagttgtagttagtggaatagttaagttggatgaaattcaataaataagggtataataatt-aaaaaaataataaatgttgcattg 25571388  T
Q  150 gtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattattttaagacg 215  Q
    |||||||||| ||||||||||||| ||| | |||||||||  |||||| ||||||||||| |||||    
T  25571387 gtattctaaagtgacaattattttgagaaaaagaaaaaatagtaaagagacaattattttgagacg 25571322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 26974093 - 26974018
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtgg 125  Q
    ||||||||| |||||||||||||||||||| |||||| ||||| | |||||||| ||||||||  |||||||||||    
T  26974093 taaaatactcttattaattgtagttagtggagtagttaagttgaatgaaatttattaaataaatgtataatagtgg 26974018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 62 - 124
Target Start/End: Complemental strand, 7463268 - 7463206
Alignment:
Q  62 attaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtg 124  Q
    |||||||||||||||||| |||||| ||||||| |||||| |||||||||||||| |||||||    
T  7463268 attaattgtagttagtggagtagttaagttggatgaaattcaataaataaagatagaatagtg 7463206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 60 - 206
Target Start/End: Complemental strand, 13962016 - 13961872
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaa 159  Q
    ||||||| |||||||||||| |||||| ||||||| |||||||||||||||| |||||  ||   |        ||| ||| ||||||||||||||||||    
T  13962016 ttattaagtgtagttagtggagtagttaagttggatgaaatttaataaataatgatatccta--tgagaaaaaaaataaatgctgcattggtattctaaa 13961919  T
Q  160 ttgacaattattttaagacagagaaaaaatgataaagaaacaattat 206  Q
     ||| ||||||||||||| | |||||||  |||||||| ||||||||    
T  13961918 gtgataattattttaagaaaaagaaaaacggataaagagacaattat 13961872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 62 - 125
Target Start/End: Complemental strand, 22738756 - 22738693
Alignment:
Q  62 attaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtgg 125  Q
    |||||||||||||||| |  ||||| ||||||| |||||||||||||||||| |||||||||||    
T  22738756 attaattgtagttagtagattagttaagttggatgaaatttaataaataaaggtataatagtgg 22738693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 50 - 121
Target Start/End: Complemental strand, 30866034 - 30865963
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataata 121  Q
    ||||||||| ||||||||| || ||||||| |||||| |||| || |||||| |||||||||||||||||||    
T  30866034 taaaatactcttattaattataattagtggagtagttaagttagatgaaattcaataaataaagatataata 30865963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 143 - 197
Target Start/End: Original strand, 47045620 - 47045674
Alignment:
Q  143 tgcattggtattctaaattgacaattattttaagacagagaaaaaatgataaaga 197  Q
    ||||||||||||||||| ||||||||||||| ||| |||||||||||| ||||||    
T  47045620 tgcattggtattctaaagtgacaattattttgagatagagaaaaaatgttaaaga 47045674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 47 - 121
Target Start/End: Complemental strand, 49101733 - 49101659
Alignment:
Q  47 tattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataata 121  Q
    ||||||||||||  ||||||||||||||||||| |||||| ||||| | |||||| ||||||||||  |||||||    
T  49101733 tattaaaatactcatattaattgtagttagtggagtagttaagttgaatgaaattcaataaataaaagtataata 49101659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 50 - 111
Target Start/End: Original strand, 3178266 - 3178327
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataa 111  Q
    ||||| || ||||||||||||||||||||| |||||| ||||||| |||||| |||||||||    
T  3178266 taaaacacctttattaattgtagttagtggagtagttaagttggatgaaattcaataaataa 3178327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 213
Target Start/End: Original strand, 8592512 - 8592666
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaa 159  Q
    |||||||||||||||||||| |||||  |||| || ||||||||||||||||   ||||||||| |       |||| ||| |||||||| |||| ||||    
T  8592512 ttattaattgtagttagtggagtagtaaagttagatgaaatttaataaataagagtataatagtaggaaaaaataataaatgctgcattgatattgtaaa 8592611  T
Q  160 ttgacaattattttaagacagag-aaaaaatgataaagaaacaattattttaaga 213  Q
     ||| ||||||||| ||| | || |||||||| |||||| ||||| ||| |||||    
T  8592612 atgaaaattattttgagaaaaagaaaaaaatgctaaagagacaataattgtaaga 8592666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 206
Target Start/End: Complemental strand, 9786045 - 9785899
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaa 159  Q
    |||||||||||||||||||  |||||| |||||||  ||||| ||||||||| | |||||||  |        |||| ||| |||||||  |||| ||||    
T  9786045 ttattaattgtagttagtgaagtagttaagttggataaaattcaataaataagggtataataaagaaaaataataataaatgctgcattaatattttaaa 9785946  T
Q  160 ttgacaattattttaagacagagaaaaaatgataaagaaacaattat 206  Q
     ||||||||||||| ||| | |||||||||||||||||  |||||||    
T  9785945 gtgacaattattttgagaaaaagaaaaaatgataaagaggcaattat 9785899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 50 - 111
Target Start/End: Original strand, 32018978 - 32019039
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataa 111  Q
    ||||||||| ||||||||||| |||||||| ||| || ||||||| ||||||||||||||||    
T  32018978 taaaatactcttattaattgttgttagtggagtaattaagttggatgaaatttaataaataa 32019039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 50 - 196
Target Start/End: Original strand, 34100609 - 34100755
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattg 149  Q
    |||||||  ||||||||||||||||| ||  |||||| ||||||| || ||| ||||||||| | ||||||||||        |||| |||  ||||||     
T  34100609 taaaatatctttattaattgtagttactgaagtagttaagttggatgacattcaataaataagggtataatagtgaaaaaacataataaatgttgcatta 34100708  T
Q  150 gtattctaaattgacaattattttaagacagagaaaaaatgataaag 196  Q
    ||||| |||| ||||||||||||||||| | | |||||||| |||||    
T  34100709 gtattgtaaagtgacaattattttaagaaaaataaaaaatgttaaag 34100755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 50 - 111
Target Start/End: Original strand, 41506127 - 41506188
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataa 111  Q
    ||||| ||| |||||||||||||||||||| |||||| ||||||| |||||| |||||||||    
T  41506127 taaaacactcttattaattgtagttagtggagtagttaagttggatgaaattcaataaataa 41506188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 5524447 - 5524369
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaat---ttaataaataaagatataatagtgg 125  Q
    ||||| ||||||||||||| |||||||| | |||||| ||||||| |||||   ||||||||||||| |||||||||||    
T  5524447 taaaacacttttattaattatagttagttgagtagttaagttggatgaaatttattaataaataaaggtataatagtgg 5524369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 207
Target Start/End: Complemental strand, 83442 - 83294
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnn-taatgaatactgcattggtattctaa 158  Q
    ||||||||||||||||| || |||||| |||| || |||||| |||||||||   ||| ||| |||        |||| ||| |||||||||||||||||    
T  83442 ttattaattgtagttagcggagtagttaagtttgatgaaattcaataaataagagtatgataatggaaaaaaaataataaatgctgcattggtattctaa 83343  T
Q  159 attgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
    | ||||||||||||| ||| | |||||| ||| ||| || |||||||||    
T  83342 agtgacaattattttgagaaaaagaaaagatggtaatgagacaattatt 83294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 207
Target Start/End: Complemental strand, 21390352 - 21390204
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnn-taatgaatactgcattggtattctaa 158  Q
    ||||| |||||||||||||| |||||| |||| || |||||| ||||||||| | ||||||| |||        |||| ||   |||||||||||| |||    
T  21390352 ttattgattgtagttagtggagtagttaagttagatgaaattcaataaataagggtataataatggaaaaaaaataataaacgttgcattggtattataa 21390253  T
Q  159 attgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
    | ||||||||||||| ||| | |||||| ||| |||||| |||||||||    
T  21390252 agtgacaattattttgagaaaaagaaaagatgctaaagagacaattatt 21390204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 207
Target Start/End: Original strand, 21760060 - 21760203
Alignment:
Q  64 taattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaattga 163  Q
    |||||||||||| ||| |||||| ||||||| |||||| ||||| | | | |||||||  ||       |||| |||  ||||||| ||||||||| |||    
T  21760060 taattgtagttaatggagtagttaagttggatgaaattcaataattgagggtataataaaggaaaaatataataaatgttgcattgatattctaaagtga 21760159  T
Q  164 caattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
    |||||||||| ||| | ||||||| || |||||| |||||||||    
T  21760160 caattattttgagaaaaagaaaaactggtaaagagacaattatt 21760203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 173
Target Start/End: Complemental strand, 37245757 - 37245634
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattg 149  Q
    ||||| ||| |||||||||||| | ||||| || ||| ||||||| |||||| ||||||||| | ||||||||||        |||| |||  |||||||    
T  37245757 taaaacactcttattaattgtaataagtggagtggttaagttggatgaaattcaataaataagggtataatagtgagaaaaaataataaatgttgcattg 37245658  T
Q  150 gtattctaaattgacaattatttt 173  Q
    ||||| |||| |||||||||||||    
T  37245657 gtattgtaaagtgacaattatttt 37245634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 207
Target Start/End: Complemental strand, 40076302 - 40076228
Alignment:
Q  133 taatgaatactgcattggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
    |||| ||| ||||||||||||| |||| ||||||||||||| ||| | |||||||||| |||||| || ||||||    
T  40076302 taataaatgctgcattggtattataaagtgacaattattttgagaaaaagaaaaaatggtaaagagactattatt 40076228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 50 - 111
Target Start/End: Complemental strand, 23670553 - 23670492
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataa 111  Q
    ||||| ||| |||||||| ||||||||||| |||||| |||| || ||||||||||||||||    
T  23670553 taaaacactcttattaatggtagttagtggagtagttaagtttgatgaaatttaataaataa 23670492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 40 - 101
Target Start/End: Complemental strand, 35333120 - 35333059
Alignment:
Q  40 tattaattattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatt 101  Q
    ||||| ||||||||||| | |||||||||||||||||||| |||||| |||| || ||||||    
T  35333120 tattatttattaaaatattattattaattgtagttagtggagtagttaagttagatgaaatt 35333059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 17610979 - 17610896
Alignment:
Q  40 tattaattattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagt 123  Q
    ||||| ||| ||||||| || ||||||||||||||| ||   ||||| ||||||| |||||| |||| | ||||||||||||||    
T  17610979 tattatttactaaaatatttgtattaattgtagttattgaaatagttaagttggatgaaattcaatacacaaagatataatagt 17610896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 29835476 - 29835550
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtgg 125  Q
    ||||| ||| |||||||||| |||||  || |||||| ||||||| | |||| |||||||||||||||||||||||    
T  29835476 taaaacactcttattaattgcagttaacggagtagtt-agttggatgtaattcaataaataaagatataatagtgg 29835550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 46478355 - 46478430
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtgg 125  Q
    ||||||||  |||||||||||||||| | | |||||| ||||||| |||||| |||||||||   |||||||||||    
T  46478355 taaaatacccttattaattgtagttaattgagtagttaagttggatgaaattcaataaataagagtataatagtgg 46478430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 16560706 - 16560780
Alignment:
Q  133 taatgaatactgcattggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
    |||| ||||||||||| |||||||||||| |||||||||||  || | |||||| ||| ||||||  ||||||||    
T  16560706 taataaatactgcatttgtattctaaattaacaattattttgtgaaaaagaaaagatgttaaagaggcaattatt 16560780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 207
Target Start/End: Complemental strand, 16604956 - 16604882
Alignment:
Q  133 taatgaatactgcattggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
    |||| ||||||||||| |||||||||||| |||||||||||  || | |||||| ||| ||||||  ||||||||    
T  16604956 taataaatactgcatttgtattctaaattaacaattattttgtgaaaaagaaaagatgttaaagaggcaattatt 16604882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 125
Target Start/End: Complemental strand, 28103790 - 28103725
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtgg 125  Q
    |||||||||||||||||||  || ||| ||||||| |||||| |||||||||   |||||||||||    
T  28103790 ttattaattgtagttagtgaagtggttaagttggatgaaattcaataaataagcgtataatagtgg 28103725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 111
Target Start/End: Original strand, 32018774 - 32018835
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataa 111  Q
    ||||||||| ||||||||||| |||||| | ||| || |||||||  |||||||||||||||    
T  32018774 taaaatactcttattaattgtcgttagtagagtaattaagttggattaaatttaataaataa 32018835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 207
Target Start/End: Complemental strand, 38391723 - 38391662
Alignment:
Q  146 attggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
    |||| |||| |||| ||||||||||||| ||| | |||||||||| |||||| |||||||||    
T  38391723 attgatattataaagtgacaattattttgagaaaaagaaaaaatggtaaagagacaattatt 38391662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 24166974 - 24166930
Alignment:
Q  133 taatgaatactgcattggtattctaaattgacaattattttaaga 177  Q
    |||| |||| |||||||||||| |||| |||||||||||||||||    
T  24166974 taataaatattgcattggtattgtaaagtgacaattattttaaga 24166930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 3e-24; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 50 - 207
Target Start/End: Original strand, 38405163 - 38405321
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtgg-nnnnnnntaatgaatactgcatt 148  Q
    ||||||||  |||||||||||||||||||| |||||| ||||||| |||||| ||||||||||| ||||||| |||        |||| |||  ||||||    
T  38405163 taaaatacccttattaattgtagttagtggtgtagttaagttggatgaaattcaataaataaaggtataataatggaaaaaaagtaataaatgttgcatt 38405262  T
Q  149 ggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
    | ||||||||| ||||||||||||| ||| | |||||||||| |||| |||||||||||    
T  38405263 gctattctaaagtgacaattattttgagaaaaagaaaaaatggtaaaaaaacaattatt 38405321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 60 - 207
Target Start/End: Original strand, 16821402 - 16821550
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnn-taatgaatactgcattggtattctaa 158  Q
    ||||||||| |||||||||| ||| || ||||| | |||||| ||||||||| | ||||||||||         |||| ||| |||||||||||||||||    
T  16821402 ttattaattatagttagtggagtatttaagttgaatgaaattcaataaataagggtataatagtgcaaaaataataataaatgctgcattggtattctaa 16821501  T
Q  159 attgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
    | ||||||||||||||| | |||||||||||| |||||| |||||||||    
T  16821502 agtgacaattattttaacaaagagaaaaaatgttaaagagacaattatt 16821550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 39 - 217
Target Start/End: Complemental strand, 2066860 - 2066684
Alignment:
Q  39 gtattaattattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatga 138  Q
    |||||| ||||||||| ||  ||||||||| |||||||||| |||||| |||| || |||||| ||||||||||| ||||||| ||        |||| |    
T  2066860 gtattatttattaaaacacccttattaattttagttagtggggtagttaagttagatgaaattcaataaataaaggtataataatg--aaaaaataataa 2066763  T
Q  139 atactgcattggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattattttaagacgaa 217  Q
    || || ||||||||||||||| ||||||||||||| ||| | |||||||||  |||||| | ||||||| | |||||||    
T  2066762 atgcttcattggtattctaaagtgacaattattttgagaaaaagaaaaaatagtaaagagataattattgtgagacgaa 2066684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 2653484 - 2653355
Alignment:
Q  46 ttattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgc 145  Q
    ||||||||||||| ||||||||||||||||  || |||||| | ||||| |||||||||||||||||| ||||||| |||       |||| |||  |||    
T  2653484 ttattaaaatactcttattaattgtagttaaaggagtagttaaattggatgaaatttaataaataaaggtataataatggaaaaagataataaatgttgc 2653385  T
Q  146 attggtattctaaattgacaattattttaa 175  Q
    |||| ||||||||| |||||| ||||||||    
T  2653384 attgatattctaaagtgacaactattttaa 2653355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 50 - 207
Target Start/End: Original strand, 49428403 - 49428559
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattg 149  Q
    ||||||||  |||||||||||||||||||| ||| || ||||||| |||||| ||||||||| | ||||||| |||       |||| |||  |||||||    
T  49428403 taaaatacccttattaattgtagttagtggagtaattaagttggatgaaattcaataaataagggtataataatggaaaaaagtaataaatgttgcattg 49428502  T
Q  150 gtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
     | ||||||| ||||||||||||| ||| | |||||||||| |||||| |||||||||    
T  49428503 at-ttctaaagtgacaattattttgagaaaaagaaaaaatggtaaagagacaattatt 49428559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 50 - 188
Target Start/End: Original strand, 5841488 - 5841627
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtag-ttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcatt 148  Q
    ||||||||  |||||||||||||||||||| |||| || ||||||| |||||| ||||||||||| ||||||| |||       |||| |||  ||||||    
T  5841488 taaaatacccttattaattgtagttagtggagtagtttaagttggatgaaattcaataaataaaggtataataatggaaattaataataaatgatgcatt 5841587  T
Q  149 ggtattctaaattgacaattattttaagacagagaaaaaa 188  Q
    | ||||||||| ||||||||||||| ||| | ||||||||    
T  5841588 gatattctaaagtgacaattattttgagaaaaagaaaaaa 5841627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 60 - 207
Target Start/End: Original strand, 11907670 - 11907817
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaa 159  Q
    |||||||||||||||| ||| |||||| ||||||| ||| || ||||||||||  ||| ||| |||       |||| ||| ||||||||||||||||||    
T  11907670 ttattaattgtagttattggagtagttaagttggatgaagttcaataaataaatgtattataatggaaaaaaataataaatgctgcattggtattctaaa 11907769  T
Q  160 ttgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
     ||||||||||||| ||| | |||||||  | |||| |||||||||||    
T  11907770 gtgacaattattttgagaaaaagaaaaatgggtaaaaaaacaattatt 11907817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 42517790 - 42517872
Alignment:
Q  133 taatgaatactgcattggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattattttaagacg 215  Q
    |||| ||| ||||||| ||||| |||| ||||||||||||| ||| | ||||||||||||||||||||||||||| |||||||    
T  42517790 taataaatgctgcatttgtattttaaagtgacaattatttttagaaaaagaaaaaatgataaagaaacaattattgtaagacg 42517872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 60 - 187
Target Start/End: Original strand, 47773090 - 47773217
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaa 159  Q
    |||||||||||||||||||| |||||| ||||||| ||| || ||||||||| | ||| ||| |||       |||| ||| ||||||||||||||||||    
T  47773090 ttattaattgtagttagtggagtagttaagttggatgaagttcaataaataagggtattataatggaaaaaaataataaatgctgcattggtattctaaa 47773189  T
Q  160 ttgacaattattttaagacagagaaaaa 187  Q
     ||||||||||||| ||| | |||||||    
T  47773190 gtgacaattattttgagaaaaagaaaaa 47773217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 32884861 - 32884786
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtgg 125  Q
    ||||| ||| |||||||||||||||||||| |||||| ||||||| | |||| ||||||||| |||||||||||||    
T  32884861 taaaacactcttattaattgtagttagtggagtagttaagttggatggaattcaataaataaggatataatagtgg 32884786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 60 - 207
Target Start/End: Original strand, 26147686 - 26147836
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaattt-aataaataaagatataatagtggnnnnnnntaa--tgaatactgcattggtattct 156  Q
    |||||||||||||||||||| ||| || ||||||| ||| ||| ||||||||| | ||||||| |||       |||  | |||  || |||||||||||    
T  26147686 ttattaattgtagttagtggagtaattaagttggatgaattttcaataaataagggtataataatggaaaaaaataaaataaatgttgtattggtattct 26147785  T
Q  157 aaattgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
    ||| ||||||||||||| ||| | ||||||||||||||||| |||||||||    
T  26147786 aaagtgacaattattttgagaaaaagaaaaaatgataaagagacaattatt 26147836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 50 - 188
Target Start/End: Original strand, 47464426 - 47464565
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtgg-nnnnnnntaatgaatactgcatt 148  Q
    ||||| ||| ||||||||||||||| |||| |||||| ||||||| |||||| ||||||||| | |||||||||||        |||| |||| ||||||    
T  47464426 taaaaaactcttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtataatagtggaaaaaaaataataaataatgcatt 47464525  T
Q  149 ggtattctaaattgacaattattttaagacagagaaaaaa 188  Q
    |||||| ||||  || ||||||||||||| | ||||||||    
T  47464526 ggtattgtaaaacgataattattttaagaaaaagaaaaaa 47464565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 46 - 205
Target Start/End: Complemental strand, 10754437 - 10754280
Alignment:
Q  46 ttattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgc 145  Q
    ||||||||||||| ||||||||||||||||||||  || || ||||| | ||||||||||||||||   |||||| || |       |||| | |  |||    
T  10754437 ttattaaaatactgttattaattgtagttagtggaataattaagttgaatgaaatttaataaataagagtataatggttg-gaaaaataataattgttgc 10754339  T
Q  146 attggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaatta 205  Q
    ||||||||| || ||||||||||||||| |||||||| ||||||| |||||| |||||||    
T  10754338 attggtattttagattgacaattattttgagacagag-aaaaatgttaaagagacaatta 10754280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 46 - 205
Target Start/End: Complemental strand, 10968206 - 10968049
Alignment:
Q  46 ttattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgc 145  Q
    ||||||||||||| ||||||||||||||||||||  || || ||||| | ||||||||||||||||   |||||| || |       |||| | |  |||    
T  10968206 ttattaaaatactgttattaattgtagttagtggaataattaagttgaatgaaatttaataaataagagtataatggttg-gaaaaataataattgttgc 10968108  T
Q  146 attggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaatta 205  Q
    ||||||||| || ||||||||||||||| |||||||| ||||||| |||||| |||||||    
T  10968107 attggtattttagattgacaattattttgagacagag-aaaaatgttaaagagacaatta 10968049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 60 - 125
Target Start/End: Original strand, 17237367 - 17237432
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtgg 125  Q
    |||||||||||||||||||| |||||| ||||||| |||||| ||||||||| | |||||||||||    
T  17237367 ttattaattgtagttagtggagtagttaagttggatgaaattcaataaataagggtataatagtgg 17237432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 50 - 207
Target Start/End: Original strand, 42616964 - 42617120
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattg 149  Q
    ||||||| |||||||||||||||| ||||| |||||| ||| | | |||||| |||||||||   ||||||| |||       |||| |||  ||||||     
T  42616964 taaaatatttttattaattgtagtaagtggagtagttaagtcgaatgaaattcaataaataagtgtataataatggaaaataataataaatgttgcattt 42617063  T
Q  150 gtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
    |||||||||| ||||||||||||| ||| | || ||||||| ||| ||||||||||||    
T  42617064 gtattctaaagtgacaattattttgagaaaaag-aaaaatgttaatgaaacaattatt 42617120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 51624846 - 51624771
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtgg 125  Q
    ||||| |||||||||| ||||||||||||| |||||| ||||||| |||||| ||||||||| | ||| |||||||    
T  51624846 taaaacacttttattatttgtagttagtggagtagttaagttggatgaaattcaataaataagggtatgatagtgg 51624771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 59 - 125
Target Start/End: Original strand, 6643730 - 6643796
Alignment:
Q  59 tttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtgg 125  Q
    |||||||||||||||||||||  ||||| ||||||| |||||| ||||||||| | |||||||||||    
T  6643730 tttattaattgtagttagtggtatagttaagttggatgaaattcaataaataagggtataatagtgg 6643796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 17114490 - 17114363
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaa 159  Q
    |||||||||||||||||||| |||||| | ||||| ||| || ||||||||||| ||| ||| |||       |||| ||  ||||||  ||||||||||    
T  17114490 ttattaattgtagttagtggagtagttaatttggaggaagttcaataaataaaggtattataatggaaaaaaataataaacgctgcataagtattctaaa 17114391  T
Q  160 ttgacaattattttaagacagagaaaaa 187  Q
     ||||||||||||||||| | |||||||    
T  17114390 atgacaattattttaagaaaaagaaaaa 17114363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 18741531 - 18741596
Alignment:
Q  46 ttattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataa 111  Q
    |||||||||||  ||||||||||||||||| ||| |||||| ||||||| |||||| |||||||||    
T  18741531 ttattaaaatatctttattaattgtagttaatggagtagttaagttggatgaaattcaataaataa 18741596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 121
Target Start/End: Complemental strand, 22130093 - 22130032
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataata 121  Q
    |||||||||||||||||||| ||| || ||||||| |||||| ||||||||||| |||||||    
T  22130093 ttattaattgtagttagtggagtaattaagttggatgaaattcaataaataaaggtataata 22130032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 121
Target Start/End: Original strand, 33790802 - 33790863
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataata 121  Q
    |||||||||||||||||||| |||||| ||||||| |||||| ||||||||| | |||||||    
T  33790802 ttattaattgtagttagtggagtagttaagttggatgaaattcaataaataagggtataata 33790863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 121
Target Start/End: Original strand, 35311294 - 35311355
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataata 121  Q
    |||||||||||||||||||| ||| || ||||||| |||||| ||||||||||| |||||||    
T  35311294 ttattaattgtagttagtggagtaattaagttggatgaaattcaataaataaaggtataata 35311355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 46 - 219
Target Start/End: Complemental strand, 18532243 - 18532070
Alignment:
Q  46 ttattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgc 145  Q
    ||||||||||| ||||||||||| |||| ||||| || ||| | | ||| |||||| ||||||| | ||||||||||||        |||| |||| | |    
T  18532243 ttattaaaatagttttattaattatagtaagtggagtggttaactaggatgaaattcaataaattatgatataatagtgaaaaataataataaatattac 18532144  T
Q  146 attggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattattttaagacgaagg 219  Q
    |||| |||||||||  ||  |||||| | |||||  | ||||||| ||||||||||||||| |||||| |||||    
T  18532143 attgatattctaaaacgatgattattctcagacatgggaaaaatgttaaagaaacaattatcttaagaggaagg 18532070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 59 - 212
Target Start/End: Original strand, 7061734 - 7061889
Alignment:
Q  59 tttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaa 158  Q
    |||||||||||||||||||||  || || ||||| | |||||| ||||||||| | ||||||||||        |||| |||  || |||| |||| |||    
T  7061734 tttattaattgtagttagtggattaattaagttgaatgaaattcaataaataagggtataatagtgaaaataaataataaatgttgtattgatattttaa 7061833  T
Q  159 attgacaattattttaagacagagaaaaa--atgataaagaaacaattattttaag 212  Q
    | | ||||||||||| ||| |||||||||  ||| |||||||||||||||| ||||    
T  7061834 agtaacaattattttgagaaagagaaaaaatatgctaaagaaacaattattgtaag 7061889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 34360715 - 34360640
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtgg 125  Q
    ||||| ||| |||||||||||||||||||| |||||| ||||| |  ||||| ||||||||| | |||||||||||    
T  34360715 taaaacactcttattaattgtagttagtggagtagttaagttgaataaaattcaataaataagggtataatagtgg 34360640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 187
Target Start/End: Original strand, 49176005 - 49176132
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagt-ggnnnnnnntaatgaatactgcattggtattctaa 158  Q
    ||||||||||||||||| || |||||| |||||||  ||||| ||||||||| | ||||||||| ||       |||| | |  ||||||||||||||||    
T  49176005 ttattaattgtagttagcggagtagttaagttggataaaattcaataaataagggtataatagtgggaaaaaaataataattgttgcattggtattctaa 49176104  T
Q  159 attgacaattattttaagacagagaaaaa 187  Q
    | ||||||||||||| |||| ||||||||    
T  49176105 agtgacaattattttgagac-gagaaaaa 49176132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 124
Target Start/End: Complemental strand, 35998875 - 35998798
Alignment:
Q  46 ttattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtg 124  Q
    |||||||||||   |||||||||||||||  ||| |||||| ||||||| ||| || ||||||||||||||||||||||    
T  35998875 ttattaaaatatcattattaattgtagttgatggagtagttaagttggatgaa-ttcaataaataaagatataatagtg 35998798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 215
Target Start/End: Complemental strand, 36985835 - 36985683
Alignment:
Q  61 tattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaat 160  Q
    ||||||||||||||||| |  || || ||||||| |||||| ||||||||| | |||||| ||||        | | ||| || ||||| |||||||||     
T  36985835 tattaattgtagttagtagaataattaagttggatgaaattcaataaataagggtataatggtggaaaaaaacagtaaatgcttcattgatattctaaac 36985736  T
Q  161 tgacaattattttaagacagagaaaaaatgataaagaaacaattattttaagacg 215  Q
    ||||||||||||| |||| ||||||||||| |  ||| ||||||||||| |||||    
T  36985735 tgacaattattttgagactgagaaaaaatgtt--agagacaattattttgagacg 36985683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 124
Target Start/End: Complemental strand, 53412168 - 53412094
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtg 124  Q
    ||||||| ||||||||||| ||||| ||||  ||||| ||||||| |||||| ||||||||||  ||||||||||    
T  53412168 taaaatatttttattaattatagtttgtggaatagttaagttggatgaaattcaataaataaaagtataatagtg 53412094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 125
Target Start/End: Original strand, 2942715 - 2942780
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtgg 125  Q
    |||||||||||||||||||| || ||| ||||| | ||| || |||||| ||||||||||||||||    
T  2942715 ttattaattgtagttagtggagtggttaagttgaatgaatttcaataaacaaagatataatagtgg 2942780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 121
Target Start/End: Original strand, 21240775 - 21240836
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataata 121  Q
    |||||||||||||||||| | |||||| ||||||| |||||| ||||||||| | |||||||    
T  21240775 ttattaattgtagttagttgagtagttaagttggatgaaattcaataaataagggtataata 21240836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 197
Target Start/End: Original strand, 35380404 - 35380542
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtgg-nnnnnnntaatgaatactgcattggtattctaa 158  Q
    |||||||||||||||||||| || ||| ||||||| |||||| |||||||||   ||||||| |||        |||| |||  |||||||||||| |||    
T  35380404 ttattaattgtagttagtggagtggttaagttggatgaaattcaataaataagagtataataatggaaaaaaaataataaatgttgcattggtattataa 35380503  T
Q  159 attgacaattattttaagacagagaaaaaatgataaaga 197  Q
    | ||||||||||||| ||| | ||||||| || ||||||    
T  35380504 agtgacaattattttgagaaaaagaaaaattgctaaaga 35380542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 38502539 - 38502604
Alignment:
Q  46 ttattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataa 111  Q
    ||||||||||||||||||||||| |||||| ||  |||||| |||||||  ||||| |||||||||    
T  38502539 ttattaaaatacttttattaattatagttaatgtagtagttaagttggataaaattcaataaataa 38502604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 50 - 111
Target Start/End: Original strand, 47359010 - 47359071
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataa 111  Q
    |||||||||||||||||||||||| ||||| ||| || ||||| | |||||| |||||||||    
T  47359010 taaaatacttttattaattgtagtcagtggagtaattaagttgaatgaaattcaataaataa 47359071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 187
Target Start/End: Complemental strand, 30192212 - 30192176
Alignment:
Q  151 tattctaaattgacaattattttaagacagagaaaaa 187  Q
    ||||||||| |||||||||||||||||||||||||||    
T  30192212 tattctaaagtgacaattattttaagacagagaaaaa 30192176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 110
Target Start/End: Original strand, 38663508 - 38663568
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaata 110  Q
    ||||| |||||||||||| |||||||||   |||||| ||||||| |||||||||||||||    
T  38663508 taaaacacttttattaatcgtagttagtaaagtagttaagttggatgaaatttaataaata 38663568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 44526429 - 44526377
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaa 112  Q
    ||||||||||||||||||||  ||||  ||||||| |||||||||||||||||    
T  44526429 ttattaattgtagttagtggaatagtgaagttggatgaaatttaataaataaa 44526377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 209
Target Start/End: Complemental strand, 35251862 - 35251799
Alignment:
Q  147 ttggtattctaaattgacaattattttaagacagagaa-aaaatgataaagaaacaattatttt 209  Q
    ||||||||||||||||| ||||||||  |||||||||| |||||| |||| | |||||||||||    
T  35251862 ttggtattctaaattgataattatttggagacagagaaaaaaatgttaaaaagacaattatttt 35251799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 215
Target Start/End: Complemental strand, 53412072 - 53412001
Alignment:
Q  145 cattggtattctaaattgacaattattttaagacagag-aaaaaatgataaagaaacaattattttaagacg 215  Q
    ||||||||||||||| ||||||||||||||||| | || |||||||| |||||| |  |||||||| |||||    
T  53412072 cattggtattctaaaatgacaattattttaagataaagtaaaaaatgctaaagagatgattattttgagacg 53412001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 196
Target Start/End: Original strand, 25734780 - 25734826
Alignment:
Q  150 gtattctaaattgacaattattttaagacagagaaaaaatgataaag 196  Q
    ||||| |||| ||||||||||||||||| |||||| |||||||||||    
T  25734780 gtattttaaagtgacaattattttaagatagagaagaaatgataaag 25734826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 175
Target Start/End: Complemental strand, 29295203 - 29295161
Alignment:
Q  133 taatgaatactgcattggtattctaaattgacaattattttaa 175  Q
    |||| |||||||||||||||||||||| ||| |||||||||||    
T  29295203 taataaatactgcattggtattctaaagtgataattattttaa 29295161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 11288700 - 11288757
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatat 117  Q
    ||||||||||||||| |||| |||||| |||||||  ||||| |||||||||| ||||    
T  11288700 ttattaattgtagttggtggagtagttaagttggataaaattcaataaataaaaatat 11288757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 187
Target Start/End: Complemental strand, 25233230 - 25233105
Alignment:
Q  61 tattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaat 160  Q
    |||||||| |||||||||  |||||| ||||||| ||| || ||||||||||||||| ||| | |       |||| |||  ||||||| |||||||||     
T  25233230 tattaattatagttagtgaagtagttaagttggatgaagttcaataaataaagatattataat-gaaaaaaataataaatgttgcattgatattctaaag 25233132  T
Q  161 tgacaattattttaagacagagaaaaa 187  Q
    ||||||||||||| ||| | |||||||    
T  25233131 tgacaattattttgagaaaaagaaaaa 25233105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 48914284 - 48914333
Alignment:
Q  137 gaatactgcattggtattctaaattgacaattattttaagacagagaaaa 186  Q
    ||||||| || || ||||||||| ||||||||||||||||||||| ||||    
T  48914284 gaatactacactgatattctaaagtgacaattattttaagacagaaaaaa 48914333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 217
Target Start/End: Original strand, 16411524 - 16411610
Alignment:
Q  134 aatgaatactgcat---tggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattattttaagacgaa 217  Q
    ||||||||||||||   ||||||||||||  ||||||| |||| | |||   |||||||| |||| ||||||||||||| |||||||    
T  16411524 aatgaatactgcataattggtattctaaagagacaattgttttgaaacaagaaaaaaatgctaaaaaaacaattattttgagacgaa 16411610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 40123009 - 40123069
Alignment:
Q  143 tgcattggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaat 203  Q
    |||||||||||| |||| ||| ||||||||||||| | | |||||||| |||||| |||||    
T  40123009 tgcattggtattgtaaagtgataattattttaagaaaaataaaaaatgctaaagagacaat 40123069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 43902321 - 43902237
Alignment:
Q  40 tattaattattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtg 124  Q
    ||||| ||||||||||| | ||||||||  |||||||||| ||| || ||||| | |||||| ||||||||| |  |||||||||    
T  43902321 tattatttattaaaatattcttattaatcatagttagtggagtaattaagttgcatgaaattcaataaataagggcataatagtg 43902237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 52859948 - 52859992
Alignment:
Q  143 tgcattggtattctaaattgacaattattttaagacagagaaaaa 187  Q
    ||||||||||||||||| ||||||||||||| ||| | |||||||    
T  52859948 tgcattggtattctaaagtgacaattattttgagaaaaagaaaaa 52859992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 3e-24; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 60 - 214
Target Start/End: Complemental strand, 31042847 - 31042693
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaa 159  Q
    ||||||||||||| |||||  ||| || ||||| | |||||| ||||||||||||||| |||||||       |||| |||  || |||| |||||||||    
T  31042847 ttattaattgtaggtagtgaagtaattaagttgaatgaaattcaataaataaagatatcatagtggaaaaaaataataaatgatgtattgatattctaaa 31042748  T
Q  160 ttgacaattattttaagacagagaaaaaatgataaagaaacaattattttaagac 214  Q
     ||||||||||||| ||| ||||||||||||||||||| ||||||||| ||||||    
T  31042747 gtgacaattattttgagaaagagaaaaaatgataaagagacaattattgtaagac 31042693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 50 - 203
Target Start/End: Complemental strand, 39864171 - 39864018
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattg 149  Q
    ||||||||| |||||||||||||||||||| |||||| ||||||| |||||| ||||||||| | |||||||||||       |||| |||  |||||||    
T  39864171 taaaatactcttattaattgtagttagtggagtagttaagttggatgaaattcaataaataagggtataatagtggaaaaaaataataaatgttgcattg 39864072  T
Q  150 gtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaat 203  Q
     |||| |||| ||||||||||||| ||  |  ||||||||| |||||| |||||    
T  39864071 atattgtaaagtgacaattattttgaggaaatgaaaaaatgctaaagagacaat 39864018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 62 - 203
Target Start/End: Complemental strand, 6785304 - 6785163
Alignment:
Q  62 attaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaatt 161  Q
    |||||||||||||||||| |||||| |||| || |||||| ||||||||| | |||||||||||       |||| |||  ||||| |||||| |||| |    
T  6785304 attaattgtagttagtggagtagttaagtttgatgaaattcaataaataagggtataatagtggaaaaaaataataaatgttgcataggtattgtaaagt 6785205  T
Q  162 gacaattattttaagacagagaaaaaatgataaagaaacaat 203  Q
    |||||||||||| ||| | |||||||||  ||||||||||||    
T  6785204 gacaattattttgagaaaaagaaaaaattctaaagaaacaat 6785163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 46 - 187
Target Start/End: Complemental strand, 9379296 - 9379155
Alignment:
Q  46 ttattaaaatacttttattaattgtagttagt-ggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactg 144  Q
    |||||||||||  ||||||||||||||||||| || |||||| |||| || ||||||||||||||| || ||||||| |||        ||| |||| ||    
T  9379296 ttattaaaatatatttattaattgtagttagtgggagtagttaagtttgatgaaatttaataaatataggtataataatggaaaaata-aataaatattg 9379198  T
Q  145 cattggtattctaaattgacaattattttaagacagagaaaaa 187  Q
    ||||| ||||||||| ||||||||||||||||| ||| |||||    
T  9379197 cattgatattctaaaatgacaattattttaagaaagaaaaaaa 9379155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 50 - 203
Target Start/End: Original strand, 14757652 - 14757804
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattg 149  Q
    ||||| ||| |||||||||||||||||||  |||||| |||| || |||||||||||||||| | |||||||||||       | || ||| |||||||     
T  14757652 taaaacactcttattaattgtagttagtgaagtagttaagttcgatgaaatttaataaataagggtataatagtggaaaaaaattataaattctgcattt 14757751  T
Q  150 gtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaat 203  Q
    ||||| ||||  |||||||||||| ||| | |||||||||| |||||| |||||    
T  14757752 gtattgtaaa-ggacaattattttgagaaaaagaaaaaatgttaaagagacaat 14757804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 60 - 173
Target Start/End: Original strand, 20209908 - 20210021
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaa 159  Q
    |||||||||||||||||||| |||||| ||||||| ||| || ||||||||| | ||| ||| |||       |||| ||| ||||||||||||||||||    
T  20209908 ttattaattgtagttagtggagtagttaagttggatgaagttcaataaataagggtattataatgggaaaaaataataaatgctgcattggtattctaaa 20210007  T
Q  160 ttgacaattatttt 173  Q
     |||||||||||||    
T  20210008 gtgacaattatttt 20210021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 59 - 203
Target Start/End: Original strand, 24991720 - 24991865
Alignment:
Q  59 tttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagt-ggnnnnnnntaatgaatactgcattggtattcta 157  Q
    |||||||||||||||||||||  ||||| ||||||| |||||| ||||||||||| ||||||||| ||       |||| |||  |||||| ||||| ||    
T  24991720 tttattaattgtagttagtggaatagttaagttggatgaaattcaataaataaaggtataatagtgggaaaaaaataataaatgttgcattagtattgta 24991819  T
Q  158 aattgacaattattttaagacagagaaaaaatgataaagaaacaat 203  Q
    || ||||||||||||| |||  || |||||||| |||||| |||||    
T  24991820 aagtgacaattattttgagaaggaaaaaaaatgctaaagagacaat 24991865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 63 - 125
Target Start/End: Complemental strand, 9307674 - 9307612
Alignment:
Q  63 ttaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtgg 125  Q
    ||||||||||||||||| |||||| ||||||| |||||| ||||||||||| |||||||||||    
T  9307674 ttaattgtagttagtggagtagttaagttggatgaaattcaataaataaaggtataatagtgg 9307612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 50 - 173
Target Start/End: Complemental strand, 37506184 - 37506061
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattg 149  Q
    ||||| |||||||||||||||||||||||| |||||| ||||| | |||||| ||||||||| | ||| ||| |||       |||| |||  |||||||    
T  37506184 taaaacacttttattaattgtagttagtggagtagttaagttgaatgaaattcaataaataagggtattataatggaaaaaaataataaatgttgcattg 37506085  T
Q  150 gtattctaaattgacaattatttt 173  Q
     ||||||||| |||||||||||||    
T  37506084 atattctaaagtgacaattatttt 37506061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 2137425 - 2137498
Alignment:
Q  48 attaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataata 121  Q
    ||||||||||||||||||||||| |||| ||| ||| || |||||||  ||||| |||||||||||||||||||    
T  2137425 attaaaatacttttattaattgttgttattggagtatttaagttggataaaattcaataaataaagatataata 2137498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 27897019 - 27896942
Alignment:
Q  46 ttattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagt 123  Q
    |||| |||||| | ||||||||| |||||||||| ||| || ||||||| |||||||||||||||||| |||||||||    
T  27897019 ttatcaaaatattcttattaattatagttagtggagtaatttagttggatgaaatttaataaataaaggtataatagt 27896942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 81 - 214
Target Start/End: Original strand, 35682883 - 35683012
Alignment:
Q  81 gtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaattgacaattattttaagacag 180  Q
    |||||| ||||||| |||||| ||||||||| | |||||||||||       |||| |||| ||||||| |||||||||||| |||||||||| ||| |     
T  35682883 gtagttaagttggatgaaattcaataaataagggtataatagtggaaaaaa-taataaatattgcattgatattctaaattggcaattattttgagaga- 35682980  T
Q  181 agaaaaaatgataaagaaacaattattttaagac 214  Q
      ||||||||||||||| ||||||||||| ||||    
T  35682981 --aaaaaatgataaagagacaattattttgagac 35683012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 143 - 214
Target Start/End: Original strand, 6160601 - 6160673
Alignment:
Q  143 tgcattggtattctaaattgacaattattttaagacagag-aaaaaatgataaagaaacaattattttaagac 214  Q
    ||||||| ||||||||| ||||||||||||| |||||||| ||||||||   |||||||||||||||||||||    
T  6160601 tgcattgatattctaaaatgacaattattttgagacagagaaaaaaatgccgaagaaacaattattttaagac 6160673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 50 - 207
Target Start/End: Original strand, 16395105 - 16395260
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattg 149  Q
    |||||||| ||| ||||||||||||||||| |||||| |||| || |||||| ||||||||| ||||||||| | |       |||| ||| || |||||    
T  16395105 taaaataccttt-ttaattgtagttagtggagtagttaagttagatgaaattcaataaataatgatataataat-gaaaaaaataataaatcctacattg 16395202  T
Q  150 gtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
    |||||||||| ||||||||||||| ||| | ||||||   | |||||| |||||||||    
T  16395203 gtattctaaagtgacaattattttgagaaaaagaaaagtgggtaaagagacaattatt 16395260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 63 - 219
Target Start/End: Complemental strand, 37539174 - 37539020
Alignment:
Q  63 ttaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaattg 162  Q
    ||||||||||||||| | |||||| |||| || |||||| ||||||||| | ||| |||||||       | || |||  | ||||||||||||||| |     
T  37539174 ttaattgtagttagtagagtagttaagtttgatgaaattcaataaataagggtatcatagtggaaaaaaattataaat--tacattggtattctaaaata 37539077  T
Q  163 acaattattttaagacagagaaaaaatgataaagaaacaattattttaagacgaagg 219  Q
    ||||||||||||| || || |||||||  |||||| || ||||||||||||||||||    
T  37539076 acaattattttaaaactgataaaaaattctaaagagaccattattttaagacgaagg 37539020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 44707818 - 44707893
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtgg 125  Q
    ||||| || ||||||||||||||||||||  | |||| ||||||| |||||| ||||||||||| |||||||||||    
T  44707818 taaaacacatttattaattgtagttagtgaagcagttaagttggatgaaattcaataaataaaggtataatagtgg 44707893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 50 - 120
Target Start/End: Original strand, 8896390 - 8896460
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataat 120  Q
    |||||||  ||||||||||||||||||||| || ||| ||||||| |||||| ||||||||||| ||||||    
T  8896390 taaaatatatttattaattgtagttagtggagtggttaagttggatgaaattcaataaataaaggtataat 8896460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 59 - 121
Target Start/End: Complemental strand, 10495890 - 10495828
Alignment:
Q  59 tttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataata 121  Q
    ||||||||||||| ||||||| |||||| ||||||| |||||| |||||||||| ||||||||    
T  10495890 tttattaattgtaattagtggagtagttaagttggatgaaattcaataaataaatatataata 10495828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 50 - 173
Target Start/End: Original strand, 33733320 - 33733443
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattg 149  Q
    |||||||||||||||||||||||||||| | || |||  || | | |||||| ||||||||| | ||||||| |||       |||| ||| || |||||    
T  33733320 taaaatacttttattaattgtagttagtagagtggttaggtagaatgaaattcaataaataagggtataataatggaaaagaataataaatgcttcattg 33733419  T
Q  150 gtattctaaattgacaattatttt 173  Q
    |||||||||| |||||||||||||    
T  33733420 gtattctaaagtgacaattatttt 33733443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 121
Target Start/End: Complemental strand, 2572519 - 2572458
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataata 121  Q
    |||||||||||||||||||| |||||| ||||| | |||||| |||||||||| ||||||||    
T  2572519 ttattaattgtagttagtggagtagttaagttgaatgaaattcaataaataaaaatataata 2572458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 50 - 188
Target Start/End: Complemental strand, 24880936 - 24880794
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagt---tgagttggaagaaatttaataaataaagatataatagtgg--nnnnnnntaatgaatactg 144  Q
    |||||||||||||||||||||||||||||| |||||   | ||||||| |||||| ||||||| | ||||||||| |||         |||| ||| ||     
T  24880936 taaaatacttttattaattgtagttagtggagtagttagtaagttggatgaaattcaataaattaggatataataatggaaaaagaaataataaatgcta 24880837  T
Q  145 cattggtattctaaattgacaattattttaagacagagaaaaaa 188  Q
    || |||||||||||| ||||||||||||||||| | ||||||||    
T  24880836 ca-tggtattctaaagtgacaattattttaagaaaaagaaaaaa 24880794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 124
Target Start/End: Complemental strand, 35367852 - 35367788
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtg 124  Q
    |||||||||||||||||||| |||||| |||| || |||||| ||||||||| | ||||||||||    
T  35367852 ttattaattgtagttagtggagtagttaagttagatgaaattcaataaataagggtataatagtg 35367788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 50 - 121
Target Start/End: Complemental strand, 7759275 - 7759204
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataata 121  Q
    ||||||||| ||||||||||||||||||||  ||||| ||||| | |||||| ||||||||| | |||||||    
T  7759275 taaaatactcttattaattgtagttagtggaatagttaagttgaatgaaattcaataaataagggtataata 7759204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 206
Target Start/End: Original strand, 30755093 - 30755155
Alignment:
Q  143 tgcattggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattat 206  Q
    ||||||||||||||||| ||| ||||||||||||| | || |||||||||||||| ||||||||    
T  30755093 tgcattggtattctaaagtgataattattttaagaaaaag-aaaaatgataaagagacaattat 30755155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 46 - 121
Target Start/End: Complemental strand, 52429408 - 52429333
Alignment:
Q  46 ttattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataata 121  Q
    ||||||||||||  |||||||||||||||||||| |||||| ||||| | |||||| | ||||||| | |||||||    
T  52429408 ttattaaaatacccttattaattgtagttagtggagtagttaagttgaatgaaattcattaaataagggtataata 52429333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 124
Target Start/End: Original strand, 22856307 - 22856369
Alignment:
Q  62 attaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtg 124  Q
    |||||||||||||||||| |||||| || |||| |||||| ||||||||||  ||||||||||    
T  22856307 attaattgtagttagtggagtagttaagctggatgaaattcaataaataaaagtataatagtg 22856369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 60 - 187
Target Start/End: Original strand, 49224054 - 49224181
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaa 159  Q
    |||||||||||||||||||| |||||| ||||||| ||| || ||||||||| | ||| ||| ||        |||| |||  |||||| ||||||||||    
T  49224054 ttattaattgtagttagtggagtagttaagttggatgaagttcaataaataagggtattataatgaaaaaaaataataaatgttgcattagtattctaaa 49224153  T
Q  160 ttgacaattattttaagacagagaaaaa 187  Q
     ||||||||||||| ||| | |||||||    
T  49224154 gtgacaattattttgagaaaaagaaaaa 49224181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 50 - 208
Target Start/End: Original strand, 34031585 - 34031743
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattg 149  Q
    ||||||||  |||||||||||||||||||   ||||   |||| | |||||| |||||||||   ||||||| |||       |||| ||| ||||||||    
T  34031585 taaaataccgttattaattgtagttagtgtaatagtaaggttgaatgaaattcaataaataagagtataataatggaaaaacataataaatgctgcattg 34031684  T
Q  150 gtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattattt 208  Q
     || ||||||  |||||||||||||||| | ||| |||||| |||||| ||||||||||    
T  34031685 atagtctaaaacgacaattattttaagaaaaagagaaaatgttaaagagacaattattt 34031743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 143 - 215
Target Start/End: Complemental strand, 52837250 - 52837177
Alignment:
Q  143 tgcattggtattctaaattgacaattattttaagacagagaaaaaa-tgataaagaaacaattattttaagacg 215  Q
    ||||||| |||| |||| || |||||||||| ||||| |||||||| || |||||| |||||||||||||||||    
T  52837250 tgcattgctattataaagtggcaattattttgagacatagaaaaaaatgttaaagagacaattattttaagacg 52837177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 106
Target Start/End: Original strand, 6023707 - 6023763
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaata 106  Q
    |||||||| ||||||||||||||||| ||| |||||| ||||||| |||||| ||||    
T  6023707 taaaatacctttattaattgtagttattggagtagttaagttggatgaaattcaata 6023763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 60 - 173
Target Start/End: Complemental strand, 12039132 - 12039019
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaa 159  Q
    |||||||||||||||| ||| ||| || ||||||| | |||| ||||||||| | |||||||||||       |||| |||  |||||| ||||| ||||    
T  12039132 ttattaattgtagttaatggagtatttaagttggatgtaattcaataaataagggtataatagtggaaaataataataaatgttgcattagtattgtaaa 12039033  T
Q  160 ttgacaattatttt 173  Q
     |||||||||||||    
T  12039032 gtgacaattatttt 12039019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 25089153 - 25089205
Alignment:
Q  59 tttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataa 111  Q
    ||||||||||||||||||||  |||||| ||||||| |||||| |||||||||    
T  25089153 tttattaattgtagttagtgaagtagttaagttggatgaaattcaataaataa 25089205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 111
Target Start/End: Complemental strand, 15699172 - 15699121
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataa 111  Q
    |||||||||||||||||||| |||||| ||||||| ||| || |||||||||    
T  15699172 ttattaattgtagttagtggagtagttaagttggatgaagttcaataaataa 15699121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 29074840 - 29074786
Alignment:
Q  150 gtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaatta 205  Q
    ||||| |||| ||||||||||||||||||||| |||||||||||||| || |||||    
T  29074840 gtattataaagtgacaattattttaagacaga-aaaaaatgataaagtaataatta 29074786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 214
Target Start/End: Complemental strand, 30437771 - 30437700
Alignment:
Q  143 tgcattggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattattttaagac 214  Q
    |||||| ||||| ||||||||||||||||||| ||||   ||||| || |||||| ||||| ||||||||||    
T  30437771 tgcattagtattataaattgacaattattttatgacacgaaaaaattgttaaagagacaatgattttaagac 30437700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 4441674 - 4441732
Alignment:
Q  63 ttaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataata 121  Q
    ||||||||||||||||| ||| || | || || |||||||||||||||||| |||||||    
T  4441674 ttaattgtagttagtggagtaattaaattagatgaaatttaataaataaaggtataata 4441732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 108
Target Start/End: Original strand, 32219715 - 32219777
Alignment:
Q  46 ttattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaa 108  Q
    ||||||||||||| ||||||||| ||||| |||| || ||| ||||||| |||||| ||||||    
T  32219715 ttattaaaatactcttattaattatagtttgtggagtggttaagttggatgaaattcaataaa 32219777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 217
Target Start/End: Complemental strand, 37239004 - 37238924
Alignment:
Q  133 taatgaatactgcattggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattattttaagacgaa 217  Q
    |||| ||| |||||||  |||| |||| ||||||||||||| ||||  |||||||||| |||  |||||||||||||||||||||    
T  37239004 taataaatgctgcattaatattttaaaatgacaattattttgagac--agaaaaaatgttaa--aaacaattattttaagacgaa 37238924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 43500881 - 43500955
Alignment:
Q  133 taatgaatactgcattggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
    |||| ||| ||||||| |||||||||| ||||||||||||| ||| | |  ||||||| |||||| |||||||||    
T  43500881 taataaatgctgcattagtattctaaagtgacaattattttgagaaaaaataaaaatggtaaagagacaattatt 43500955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 111
Target Start/End: Complemental strand, 917084 - 917023
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataa 111  Q
    ||||||||  |||||||||||||||||| |  ||||| ||||| | ||||||||||||||||    
T  917084 taaaatacccttattaattgtagttagtagattagttaagttgcatgaaatttaataaataa 917023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 121
Target Start/End: Complemental strand, 37276511 - 37276450
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataata 121  Q
    ||||||||||||||||||||  ||||| | ||||| |||||| ||||||||| | |||||||    
T  37276511 ttattaattgtagttagtggaatagttaaattggatgaaattcaataaataagggtataata 37276450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 219
Target Start/End: Complemental strand, 6365616 - 6365543
Alignment:
Q  144 gcattggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattattttaagacgaagg 219  Q
    ||||||||||| |||  |||||||||||||  || ||| |||||||  |||||| ||||||| |||||||||||||    
T  6365616 gcattggtattttaaggtgacaattatttt--gaaagaaaaaaaatattaaagagacaattactttaagacgaagg 6365543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 121
Target Start/End: Original strand, 13579690 - 13579750
Alignment:
Q  61 tattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataata 121  Q
    ||||||||||||||||||| ||| || |||| || |||||| ||||||||| | |||||||    
T  13579690 tattaattgtagttagtggagtatttaagtttgatgaaattcaataaataagggtataata 13579750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 60 - 173
Target Start/End: Complemental strand, 28749041 - 28748928
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaa 159  Q
    |||||||||||| ||||| |  | ||| ||||||| ||||||| |||||||| | |||||||||||       |||| ||| |||||||| |||| ||||    
T  28749041 ttattaattgtaattagtagaattgttaagttggatgaaattttataaataagggtataatagtgggaaaaaataataaatgctgcattgctattataaa 28748942  T
Q  160 ttgacaattatttt 173  Q
     ||| |||||||||    
T  28748941 gtgataattatttt 28748928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 207
Target Start/End: Complemental strand, 38787305 - 38787241
Alignment:
Q  143 tgcattggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
    ||||||| | ||||||| ||||||||||||| ||| | | |||||||| |||||| |||||||||    
T  38787305 tgcattgcttttctaaagtgacaattattttgagaaaaataaaaaatggtaaagagacaattatt 38787241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 1e-23; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 39 - 208
Target Start/End: Original strand, 17719303 - 17719472
Alignment:
Q  39 gtattaattattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatga 138  Q
    |||||| ||| |||||||   ||||||||| |||||||||| |||||| ||||||| |||||||||||||||||| ||||||| |||       |||| |    
T  17719303 gtattatttactaaaatatccttattaattatagttagtggagtagttaagttggatgaaatttaataaataaaggtataataatggaaaaagataataa 17719402  T
Q  139 atactgcattggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattattt 208  Q
    ||  ||||||||||||||||| ||||||||||||  ||| | | |||||||| |||||  ||||||||||    
T  17719403 atgttgcattggtattctaaagtgacaattatttagagaaaaataaaaaatgctaaagttacaattattt 17719472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 37 - 215
Target Start/End: Original strand, 26626155 - 26626333
Alignment:
Q  37 ttgtattaattattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaat 136  Q
    |||||| | |||||||||||   |||||||||||||||||||| |||||   |||| | |||||| ||||||||| | ||||||| |||       ||||    
T  26626155 ttgtataatttattaaaatatccttattaattgtagttagtggagtagtccggttgaatgaaattcaataaataagggtataataatgggaaaaaataat 26626254  T
Q  137 gaatactgcattggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattattttaagacg 215  Q
     ||| |||||||| |||| |||| ||||||||||||| ||| | |||||||  |||||||| ||||||||||| |||||    
T  26626255 aaatgctgcattgatattttaaagtgacaattattttgagaaaaagaaaaatggataaagagacaattattttgagacg 26626333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 50 - 195
Target Start/End: Original strand, 11976992 - 11977137
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattg 149  Q
    ||||||||  |||||||||||||||||| | |||||| |||| || |||||| ||||||||||| |||||||| ||       |||| ||| || ||||     
T  11976992 taaaatacccttattaattgtagttagtagagtagttaagttagatgaaattcaataaataaaggtataatagcggaaaaaaataataaatgctacatta 11977091  T
Q  150 gtattctaaattgacaattattttaagacagagaaaaaatgataaa 195  Q
    ||||| |||| ||||||||||||||||| | |||||||||| ||||    
T  11977092 gtattgtaaaatgacaattattttaagaaaaagaaaaaatggtaaa 11977137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 60 - 203
Target Start/End: Original strand, 44761560 - 44761701
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaa 159  Q
    |||||||||||||||||||| |||||| ||||||| |||||| ||||||| | | |||||||||||       ||||  || ||||||||||||| ||||    
T  44761560 ttattaattgtagttagtggagtagttaagttggatgaaattcaataaatgagggtataatagtggaaaaaactaat--atgctgcattggtattgtaaa 44761657  T
Q  160 ttgacaattattttaagacagagaaaaaatgataaagaaacaat 203  Q
     ||||||||||||| ||| | |||||||||| || ||| |||||    
T  44761658 gtgacaattattttgagaaaaagaaaaaatgctagagagacaat 44761701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 53 - 189
Target Start/End: Complemental strand, 17823978 - 17823843
Alignment:
Q  53 aatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggta 152  Q
    ||||| ||||||||||||||||||||  |||||| ||||||| |||||| |||||||||   |||||||||||       |||| |||| || |||| ||    
T  17823978 aatacctttattaattgtagttagtgaagtagttaagttggatgaaattaaataaataatagtataatagtgg-aggaaataataaatattgtattgtta 17823880  T
Q  153 ttctaaattgacaattattttaagacagagaaaaaat 189  Q
    || |||||||||||||||||| ||||||| |||||||    
T  17823879 ttataaattgacaattattttgagacagaaaaaaaat 17823843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 40996501 - 40996574
Alignment:
Q  134 aatgaatactgcattggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
    |||||||  ||||||||||||||||| ||||||||||||| ||| | |||||||||| ||||||||||||||||    
T  40996501 aatgaatgttgcattggtattctaaagtgacaattattttgagaaaaagaaaaaatggtaaagaaacaattatt 40996574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 60 - 173
Target Start/End: Original strand, 9300179 - 9300294
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagt--ggnnnnnnntaatgaatactgcattggtattcta 157  Q
    ||||||||| |||||||||| |||||| ||||| | |||||| ||||||||| |||||||||||  ||       |||| ||||||||||||||||| ||    
T  9300179 ttattaattttagttagtggagtagttaagttgaatgaaattcaataaataaggatataatagtggggaaagaaataataaatactgcattggtattgta 9300278  T
Q  158 aattgacaattatttt 173  Q
    || |||||||||||||    
T  9300279 aagtgacaattatttt 9300294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 60 - 207
Target Start/End: Complemental strand, 32678453 - 32678319
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaa 159  Q
    |||||||||||||||||||| |||||| ||||||| |||||| |||||||||  ||||||||             || |||  ||||||| |||| ||||    
T  32678453 ttattaattgtagttagtggagtagttaagttggatgaaattaaataaataagaatataata-------------ataaatgatgcattgatattttaaa 32678367  T
Q  160 ttgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
     ||||||||||||||||| | |||||||||| ||||||||||||||||    
T  32678366 gtgacaattattttaagaaaaagaaaaaatggtaaagaaacaattatt 32678319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 59 - 207
Target Start/End: Complemental strand, 39405813 - 39405665
Alignment:
Q  59 tttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaa 158  Q
    ||||||||||  ||||||||| ||| || ||||| | |||||| ||||||||| | ||||||||||        |||| ||| |||||||| ||||||||    
T  39405813 tttattaattacagttagtggagtaattaagttgaatgaaattaaataaataagggtataatagtgaaaaataataataaatgctgcattgatattctaa 39405714  T
Q  159 attgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
    | ||||||||||||| | | ||| |||||||| |||||| |||||||||    
T  39405713 agtgacaattattttgacaaagaaaaaaaatgctaaagagacaattatt 39405665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 60 - 121
Target Start/End: Complemental strand, 31082669 - 31082608
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataata 121  Q
    ||||||||| |||||||||| |||||| ||||||| |||||||||||||||||| |||||||    
T  31082669 ttattaattatagttagtggagtagttaagttggatgaaatttaataaataaaggtataata 31082608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 50 - 111
Target Start/End: Complemental strand, 42887060 - 42886999
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataa 111  Q
    |||||||| |||||||||||||||||||||||||||| |||||||  ||||| |||||||||    
T  42887060 taaaatacctttattaattgtagttagtggcgtagttaagttggataaaattcaataaataa 42886999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 29226574 - 29226645
Alignment:
Q  40 tattaattattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataa 111  Q
    ||||| ||||||||| ||| |||||||||||||||||||| |||||| |||| || |||||| |||||||||    
T  29226574 tattatttattaaaacactcttattaattgtagttagtggagtagttaagttagatgaaattcaataaataa 29226645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 32476256 - 32476181
Alignment:
Q  142 ctgcattggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattattttaagacgaa 217  Q
    |||||||||||||||||| ||||||||||||| ||| | |||||||||| |||||| || |||||| | |||||||    
T  32476256 ctgcattggtattctaaagtgacaattattttgagaaaaagaaaaaatgctaaagagactattattgtgagacgaa 32476181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 59 - 195
Target Start/End: Original strand, 34948752 - 34948886
Alignment:
Q  59 tttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaa 158  Q
    ||||||||||||||||||||| |||||| ||||||| |||||| ||||||| ||| ||||| | | |       |||| |||| ||||||||||||||||    
T  34948752 tttattaattgtagttagtggagtagttaagttggatgaaattcaataaat-aaggtataacaat-gaaaaaaataataaatattgcattggtattctaa 34948849  T
Q  159 attgacaattattttaagacagagaaaaaatgataaa 195  Q
    | | ||||||||||| ||| | |||||||||| ||||    
T  34948850 agtaacaattattttgagaaaaagaaaaaatgctaaa 34948886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 96 - 195
Target Start/End: Complemental strand, 50830 - 50731
Alignment:
Q  96 gaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaattgacaattattttaagacagagaaaaaatgataaa 195  Q
    |||||||||||||||||| ||||||| |||       |||| ||| |||||||| ||||||||| ||||||||||||||||| | | |||||||| ||||    
T  50830 gaaatttaataaataaaggtataataatggaaaaagataataaatgctgcattgatattctaaagtgacaattattttaagaaaaataaaaaatgctaaa 50731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 50 - 177
Target Start/End: Original strand, 10180003 - 10180130
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattg 149  Q
    ||||||||  |||||||||||||||||||| |||||| ||||| | |||||| ||| |||||   ||||||| | |       |||| |||  |||||||    
T  10180003 taaaatacacttattaattgtagttagtggagtagttaagttgaatgaaattcaattaataagtgtataataatagaaaataataataaatgttgcattg 10180102  T
Q  150 gtattctaaattgacaattattttaaga 177  Q
    |||||||||| |||||||||||||||||    
T  10180103 gtattctaaagtgacaattattttaaga 10180130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 10098057 - 10098114
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatat 117  Q
    |||||||||||||||||||| |||||| ||||||| ||| || |||||||||||||||    
T  10098057 ttattaattgtagttagtggagtagttaagttggatgaagttcaataaataaagatat 10098114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 203
Target Start/End: Original strand, 21216167 - 21216309
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnnt-aatgaatactgcattggtattctaa 158  Q
    |||||||||||||||||||| |||||| ||||||| |||||| |||||  || | ||||||||| |       | ||| |||  |||||||||||| |||    
T  21216167 ttattaattgtagttagtggagtagttaagttggatgaaattcaataa--aatggtataatagtagaaaaaaataaataaatgttgcattggtattgtaa 21216264  T
Q  159 attgacaattattttaagacagagaaaaaatgataaagaaacaat 203  Q
    | ||||||||||||| ||| | |||||||||| |||||| |||||    
T  21216265 agtgacaattattttcagaaaaagaaaaaatgctaaagagacaat 21216309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 215
Target Start/End: Complemental strand, 39482665 - 39482507
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataata---gtggnnnnnnntaatgaatactgcattggtattct 156  Q
    ||||||||| ||||||||||  ||||| ||| | | |||||| ||||||||| | |||||||   ||||       |||| ||||||||||||||||| |    
T  39482665 ttattaattatagttagtggactagttaagtggaatgaaattcaataaataagggtataataatagtgggaaaaaataataaatactgcattggtattgt 39482566  T
Q  157 aaattgacaattattttaagacagagaaaaaatgataaagaaacaattattttaagacg 215  Q
    ||| ||||||||||||| ||| | | ||||| || |||||| ||||| ||||| |||||    
T  39482565 aaagtgacaattattttgagaaaaataaaaattgctaaagagacaataattttgagacg 39482507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 46 - 125
Target Start/End: Original strand, 45425718 - 45425797
Alignment:
Q  46 ttattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtgg 125  Q
    ||||||||| | | |||||||||||||||||||| ||| || ||||| | |||||| ||||||||| | |||||||||||    
T  45425718 ttattaaaacattcttattaattgtagttagtggagtaattaagttgtatgaaattcaataaataagggtataatagtgg 45425797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 60 - 207
Target Start/End: Original strand, 39301022 - 39301169
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaa 159  Q
    |||||||||||||||||||  |||||| ||||| | |||||| ||||||||||  ||||||| |||       |||| ||   | ||||| |||||||||    
T  39301022 ttattaattgtagttagtgaagtagttcagttgaatgaaattcaataaataaaagtataataatggaaaataataataaacgattcattgatattctaaa 39301121  T
Q  160 ttgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
     ||||||||||||| ||| | | |||| |||||||| | |||||||||    
T  39301122 atgacaattattttgagagaaaaaaaagatgataaaaagacaattatt 39301169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 188
Target Start/End: Complemental strand, 13335276 - 13335139
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattg 149  Q
    ||||| || ||||||||||| ||||||| | |||||| |||| || |||||| ||||||| | | ||||||| |||       |||| |||  |||||||    
T  13335276 taaaacacatttattaattgcagttagtagagtagttaagtttgatgaaattcaataaatcagggtataataatggaaaaaa-taataaatgttgcattg 13335178  T
Q  150 gtattctaaattgacaattattttaagacagagaaaaaa 188  Q
    |||||||||| ||||||||||||| ||| | ||||||||    
T  13335177 gtattctaaagtgacaattattttgagaaaaagaaaaaa 13335139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 4428407 - 4428482
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtgg 125  Q
    ||||||||  |||||||||||||||||||   ||||| |||| || |||||| ||||||||||  |||||||||||    
T  4428407 taaaatacaattattaattgtagttagtgaattagttaagttagatgaaattcaataaataaaagtataatagtgg 4428482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 177
Target Start/End: Original strand, 396760 - 396794
Alignment:
Q  143 tgcattggtattctaaattgacaattattttaaga 177  Q
    ||||||||||||||||| |||||||||||||||||    
T  396760 tgcattggtattctaaagtgacaattattttaaga 396794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 125
Target Start/End: Complemental strand, 7172965 - 7172899
Alignment:
Q  59 tttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtgg 125  Q
    ||||||||||||||||| ||  |||||| ||||| | |||||| ||||||||| | |||||||||||    
T  7172965 tttattaattgtagttaatgaagtagttaagttgaatgaaattcaataaataagggtataatagtgg 7172899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 27294115 - 27294177
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaa 112  Q
    |||||||  ||||||||||| ||||||||| ||| || ||||||| |||||| ||||||||||    
T  27294115 taaaatatatttattaattgcagttagtggagtaattaagttggatgaaattcaataaataaa 27294177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 41091965 - 41091894
Alignment:
Q  142 ctgcattggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattattttaagacg 215  Q
    |||||||| |||||||||||| ||||||| || ||||  | |||||||  |||||| |||||||||||||||||    
T  41091965 ctgcattgatattctaaattggcaattatgttgagac--aaaaaaaatactaaagagacaattattttaagacg 41091894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 42886919 - 42886885
Alignment:
Q  183 aaaaaatgataaagaaacaattattttaagacgaa 217  Q
    ||||||||||||||||||||||||||| |||||||    
T  42886919 aaaaaatgataaagaaacaattattttgagacgaa 42886885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 4924112 - 4924197
Alignment:
Q  39 gtattaattattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtg 124  Q
    |||||| ||| |||||||  ||||||||||||||||| | | |||||| ||||| | |||| ||||||||||| | |||| |||||    
T  4924112 gtattatttactaaaatatctttattaattgtagttaatagagtagttaagttgaatgaaacttaataaataagggtatattagtg 4924197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 119
Target Start/End: Complemental strand, 32476351 - 32476278
Alignment:
Q  46 ttattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataa 119  Q
    ||||||||||||  |||||||||||||||| ||  |||||| |||| || |||||| ||||||||| | |||||    
T  32476351 ttattaaaatacccttattaattgtagttaatgaagtagttaagtttgatgaaattcaataaataagggtataa 32476278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 298
Target Start/End: Complemental strand, 38076808 - 38076759
Alignment:
Q  249 aaatcatcacatttcaagtcttttcaaccgccaaacataatgtaaggtcg 298  Q
    ||||||||| |||||||| |||||||||| | |||||| |||||||||||    
T  38076808 aaatcatcatatttcaagccttttcaaccactaaacatgatgtaaggtcg 38076759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 43719288 - 43719365
Alignment:
Q  46 ttattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagt 123  Q
    |||||||||||   ||||||||| |||||||| |  || || ||||||| |||||| ||||||||||| |||||||||    
T  43719288 ttattaaaataacattattaattatagttagttgaataattaagttggatgaaattcaataaataaaggtataatagt 43719365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 10953881 - 10953941
Alignment:
Q  143 tgcattggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaat 203  Q
    |||||||||||  |||| ||||||||||||| ||| | |||||||||| |||||| |||||    
T  10953881 tgcattggtatcgtaaagtgacaattattttgagaaaaagaaaaaatgttaaagagacaat 10953941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 10961886 - 10961946
Alignment:
Q  143 tgcattggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaat 203  Q
    |||||||||||  |||| ||||||||||||| ||| | |||||||||| |||||| |||||    
T  10961886 tgcattggtatcgtaaagtgacaattattttgagaaaaagaaaaaatgttaaagagacaat 10961946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 8e-22; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 50 - 208
Target Start/End: Original strand, 6753711 - 6753869
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattg 149  Q
    ||||||||  |||||||||||||||||||| |||||| ||||||| |||||||||||||||| | ||||||| |||       |||| |||  |||||||    
T  6753711 taaaatacccttattaattgtagttagtggagtagttaagttggatgaaatttaataaataagggtataataatggaaaaagataataaatgttgcattg 6753810  T
Q  150 gtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattattt 208  Q
    |||||||||| ||| ||||||||| | | | | |||||||| |||||  ||||||||||    
T  6753811 gtattctaaagtgataattattttgaaaaaaaaaaaaaatgctaaagtgacaattattt 6753869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 50 - 207
Target Start/End: Original strand, 6315830 - 6315987
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattg 149  Q
    ||||||||  |||||||||||||||||||  |||||| ||||||| |||||| ||||||||| | ||||||| |||       |||| |||  |||||||    
T  6315830 taaaatacccttattaattgtagttagtgaagtagttaagttggatgaaattcaataaataagggtataataatggaaaataataataaatgttgcattg 6315929  T
Q  150 gtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
    |||||||||| ||||||||||||| ||| | |||||||||| | |||| || ||||||    
T  6315930 gtattctaaagtgacaattattttgagaaaaagaaaaaatgcttaagagactattatt 6315987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 46 - 121
Target Start/End: Original strand, 7827975 - 7828050
Alignment:
Q  46 ttattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataata 121  Q
    ||||||||||||  |||||||||||||||||||| |||||| ||||||| |||||||||||||||| |||||||||    
T  7827975 ttattaaaatacccttattaattgtagttagtggagtagttaagttggatgaaatttaataaataaggatataata 7828050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 60 - 207
Target Start/End: Complemental strand, 40899968 - 40899821
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaa 159  Q
    |||||||||||||||||||| |||||| |||| || |||||| ||||||||| | ||||||| |||       |||| ||| ||||| || |||||||||    
T  40899968 ttattaattgtagttagtggagtagttaagttagatgaaattcaataaataagggtataataatggaaaataataataaatgctgcaatgttattctaaa 40899869  T
Q  160 ttgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
     ||||||||||||| ||| | ||||||  ||||||||| |||||||||    
T  40899868 gtgacaattattttgagaaaaagaaaatttgataaagagacaattatt 40899821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 50 - 207
Target Start/End: Complemental strand, 27542855 - 27542698
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattg 149  Q
    ||||||||| |||||||||||||||||||| |||||| |||||||  ||||| |||||||||   ||||||| |||       ||||  || |||||||     
T  27542855 taaaatactcttattaattgtagttagtggagtagttaagttggataaaattcaataaataagagtataataatggaaaaaagtaatacatgctgcatta 27542756  T
Q  150 gtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
    |||||||||| | ||||||||||| ||| | |||||||||| |||||| || ||||||    
T  27542755 gtattctaaagtcacaattattttgagaaaaagaaaaaatgctaaagatactattatt 27542698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 4441091 - 4441008
Alignment:
Q  40 tattaattattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagt 123  Q
    ||||| ||| ||||||| |||||||||||||||||||||| |||||| | ||||| |||||| ||||||||| | |||||||||    
T  4441091 tattatttactaaaatatttttattaattgtagttagtggagtagttaaattggatgaaattcaataaataacggtataatagt 4441008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 60 - 203
Target Start/End: Complemental strand, 8698359 - 8698215
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtgg-nnnnnnntaatgaatactgcattggtattctaa 158  Q
    |||||||||||||||||||| || ||| ||||||| |||||| ||||||||| | |||||||||||        |||| |||||| ||||| |||| |||    
T  8698359 ttattaattgtagttagtggagtggttaagttggatgaaattcaataaataagggtataatagtggaaaaaaaataataaatactacattgatattgtaa 8698260  T
Q  159 attgacaattattttaagacagagaaaaaatgataaagaaacaat 203  Q
    | ||||||||||||| ||| | ||||||| || |||||| |||||    
T  8698259 agtgacaattattttgagaaaaagaaaaattgctaaagagacaat 8698215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 60 - 207
Target Start/End: Complemental strand, 19929996 - 19929849
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaa 159  Q
    |||||||||||||||||||   ||||| ||||||| |||||| ||||||||| | ||||||| |||       |||| |||  |||||||||||||||||    
T  19929996 ttattaattgtagttagtgaaatagttaagttggatgaaattcaataaataagggtataataatggaaaataataataaatgttgcattggtattctaaa 19929897  T
Q  160 ttgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
     |||||||||||||  || | |||||| ||| |||| | |||||||||    
T  19929896 gtgacaattattttgcgaaaaagaaaagatggtaaatagacaattatt 19929849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 21060701 - 21060619
Alignment:
Q  39 gtattaattattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataata 121  Q
    |||||| ||| ||||||||| |||||||||||||||||||| |||||| |||||||  ||||| ||||||||| | |||||||    
T  21060701 gtattatttactaaaatactcttattaattgtagttagtggagtagttaagttggataaaattcaataaataatggtataata 21060619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 60 - 173
Target Start/End: Original strand, 40530287 - 40530401
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagt-ggnnnnnnntaatgaatactgcattggtattctaa 158  Q
    |||||||||||||||||||| || ||| ||||||| |||||| ||||||||| | ||||||||| ||       |||| ||| ||||||||||||| |||    
T  40530287 ttattaattgtagttagtggagtggttaagttggatgaaattaaataaataagggtataatagtgggaaataaataataaatgctgcattggtattgtaa 40530386  T
Q  159 attgacaattatttt 173  Q
    | |||||||||||||    
T  40530387 agtgacaattatttt 40530401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 60 - 173
Target Start/End: Complemental strand, 41496130 - 41496017
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaa 159  Q
    |||||||||||||||||||| |||||| | ||||| |||||  ||||||||||| |||||||||||       |||| |||  |||||| ||||| ||||    
T  41496130 ttattaattgtagttagtggagtagttaaattggatgaaatgcaataaataaaggtataatagtggaaaagaataataaatgttgcattagtattgtaaa 41496031  T
Q  160 ttgacaattatttt 173  Q
     |||||||||||||    
T  41496030 gtgacaattatttt 41496017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 41 - 207
Target Start/End: Original strand, 3348174 - 3348341
Alignment:
Q  41 attaattattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaat 140  Q
    |||| ||||||||| ||  ||||||| ||||||| |||  ||| || ||||||| ||| || ||||||||| ||||| ||| |||       |||| |||    
T  3348174 attatttattaaaacacccttattaaatgtagttggtgaagtaattaagttggatgaagttcaataaataaggatattataatggaaaaaaataataaat 3348273  T
Q  141 actgcattggtattctaaattgacaattattttaagacagagaaaaaatgataaagaa-acaattatt 207  Q
     |||||||||||||||||| ||||||||||||| ||| | |||||||  |||||| || |||||||||    
T  3348274 gctgcattggtattctaaaatgacaattattttgagaaaaagaaaaatagataaaaaagacaattatt 3348341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 50 - 173
Target Start/End: Original strand, 15818535 - 15818658
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattg 149  Q
    ||||| || ||||||||||||| | ||||| |||||| | ||||| ||||||||||||||||||  ||||||||||       |||| |||  |||||||    
T  15818535 taaaacacctttattaattgtaatcagtggagtagttaaattggatgaaatttaataaataaaggcataatagtggaaacaagtaattaatgttgcattg 15818634  T
Q  150 gtattctaaattgacaattatttt 173  Q
    ||||| |||| ||||| |||||||    
T  15818635 gtattgtaaagtgacagttatttt 15818658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 50 - 111
Target Start/End: Complemental strand, 6754089 - 6754028
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataa 111  Q
    ||||| ||| |||||||||||||||||||| |||||| ||||||| |||||| |||||||||    
T  6754089 taaaacactcttattaattgtagttagtggagtagttaagttggatgaaattcaataaataa 6754028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 203
Target Start/End: Complemental strand, 4818601 - 4818457
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagt-ggnnnnnnntaatgaatactgcattggtattctaa 158  Q
    |||||||||||||||||||| ||  || |||| || |||||| ||||||||| | ||||||||| ||       |||| ||| || |||||||||| |||    
T  4818601 ttattaattgtagttagtggagtgattaagttagatgaaattcaataaataagggtataatagtgggaaaaaaataataaatgctacattggtattataa 4818502  T
Q  159 attgacaattattttaagacagagaaaaaatgataaagaaacaat 203  Q
    | ||||||||||||| ||| | ||||||| || |||||| |||||    
T  4818501 agtgacaattattttgagaaaaagaaaaattgttaaagagacaat 4818457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 11796210 - 11796281
Alignment:
Q  40 tattaattattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataa 111  Q
    ||||| ||| ||||||| | |||||||||||||||||||  |||||| |||| || ||||||||||||||||    
T  11796210 tattatttactaaaatattattattaattgtagttagtgtagtagttaagttagatgaaatttaataaataa 11796281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 207
Target Start/End: Original strand, 1248657 - 1248814
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattg 149  Q
    ||||||||  |||||||||||||||||||  |||||| ||||| |  ||||| ||| ||||| | ||||||| ||        |||| |||  |||||||    
T  1248657 taaaatacccttattaattgtagttagtgaagtagttaagttgaataaaattcaattaataagggtataataatgaaaaataataataaatgttgcattg 1248756  T
Q  150 gtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
     ||||||||| ||||||||||||| ||| |  |||||| || |||||| |||||||||    
T  1248757 atattctaaagtgacaattattttgagaaaacgaaaaagtgctaaagagacaattatt 1248814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 121
Target Start/End: Complemental strand, 27580660 - 27580589
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataata 121  Q
    ||||||||  |||||||||||||||||||| |||||| ||||| | |||||| | ||||||||  |||||||    
T  27580660 taaaatacccttattaattgtagttagtggagtagttaagttgaatgaaattaattaaataaatgtataata 27580589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 105
Target Start/End: Complemental strand, 29856107 - 29856052
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaat 105  Q
    ||||||||| |||||||||||||||||||| |||||| ||||| | | ||||||||    
T  29856107 taaaatactcttattaattgtagttagtggagtagttaagttgaatgcaatttaat 29856052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 75
Target Start/End: Original strand, 6535992 - 6536030
Alignment:
Q  37 ttgtattaattattaaaatacttttattaattgtagtta 75  Q
    |||||||| ||||||||||| ||||||||||||||||||    
T  6535992 ttgtattatttattaaaatatttttattaattgtagtta 6536030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 213
Target Start/End: Complemental strand, 6833429 - 6833367
Alignment:
Q  151 tattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattattttaaga 213  Q
    ||||||||| ||||||||||||| | |||| ||||| ||  |||||| |||||||||||||||    
T  6833429 tattctaaaatgacaattattttgaaacagtgaaaagatagtaaagagacaattattttaaga 6833367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 124
Target Start/End: Original strand, 22848433 - 22848511
Alignment:
Q  46 ttattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtg 124  Q
    ||||||||| ||  |||||||||||||||| ||| ||||||   ||||| |||||| ||||||||| | ||||||||||    
T  22848433 ttattaaaacacccttattaattgtagttaatggagtagttagattggatgaaattcaataaataagggtataatagtg 22848511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 124
Target Start/End: Complemental strand, 29374402 - 29374328
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtg 124  Q
    ||||| || ||||||||||||||||||||| |||||| | ||| |  ||||| ||||||||| | ||||||||||    
T  29374402 taaaagacctttattaattgtagttagtggagtagttaaattgaataaaattcaataaataagggtataatagtg 29374328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 124
Target Start/End: Complemental strand, 29570452 - 29570378
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtg 124  Q
    ||||| || ||||||||||||||||| |||  ||||| ||||||| |||||| |||||||||   ||||||||||    
T  29570452 taaaacacctttattaattgtagttaatggaatagttaagttggatgaaattcaataaataagagtataatagtg 29570378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 145 - 215
Target Start/End: Original strand, 38161855 - 38161925
Alignment:
Q  145 cattggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattattttaagacg 215  Q
    ||||| |||||||| |||||| ||||||| ||| ||| |||||||  |||||| ||||||||||| |||||    
T  38161855 cattgatattctaatttgacagttattttgagaaagaaaaaaaatactaaagatacaattattttgagacg 38161925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 207
Target Start/End: Original strand, 2588208 - 2588273
Alignment:
Q  142 ctgcattggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
    |||||||| ||||||||| ||||||||||||| ||| | |||||||  | |||||| |||||||||    
T  2588208 ctgcattgatattctaaagtgacaattattttgagaaaaagaaaaataggtaaagagacaattatt 2588273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 173
Target Start/End: Original strand, 10598214 - 10598316
Alignment:
Q  71 agttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaattgacaattat 170  Q
    ||||||||  |||||| |||||||  ||||||||||||||||||||||| ||| |        ||| | |||| |||||||||| |||| ||||||||||    
T  10598214 agttagtgtagtagttaagttggataaaatttaataaataaagatataacagttgaaaaaaaaaataactactacattggtattttaaaatgacaattat 10598313  T
Q  171 ttt 173  Q
    |||    
T  10598314 ttt 10598316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 79
Target Start/End: Original strand, 24455010 - 24455043
Alignment:
Q  46 ttattaaaatacttttattaattgtagttagtgg 79  Q
    ||||||||||||||||||||||||||||| ||||    
T  24455010 ttattaaaatacttttattaattgtagtttgtgg 24455043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 125
Target Start/End: Complemental strand, 31655103 - 31655038
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtgg 125  Q
    |||||||||||||||||||| ||| ||  |||| | |||||| ||||||||| | |||||||||||    
T  31655103 ttattaattgtagttagtggagtaattatgttgaatgaaattcaataaataagggtataatagtgg 31655038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 207
Target Start/End: Complemental strand, 6753996 - 6753932
Alignment:
Q  143 tgcattggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
    |||||||||||| |||| ||||||||||||| ||| | |||||||||   ||||| |||||||||    
T  6753996 tgcattggtattataaagtgacaattattttgagaaaaagaaaaaattgaaaagagacaattatt 6753932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 30512757 - 30512809
Alignment:
Q  68 tgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataat 120  Q
    |||||||||||   ||||| ||||||| |||||||||||||||| ||||||||    
T  30512757 tgtagttagtgaaatagttaagttggatgaaatttaataaataaggatataat 30512809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 30553097 - 30553149
Alignment:
Q  68 tgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataat 120  Q
    |||||||||||   ||||| ||||||| |||||||||||||||| ||||||||    
T  30553097 tgtagttagtgaaatagttaagttggatgaaatttaataaataaggatataat 30553149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 82 - 122
Target Start/End: Complemental strand, 41492288 - 41492248
Alignment:
Q  82 tagttgagttggaagaaatttaataaataaagatataatag 122  Q
    ||||| ||||||| |||||| ||||||||||||||||||||    
T  41492288 tagttaagttggatgaaattcaataaataaagatataatag 41492248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 1e-20; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 46 - 125
Target Start/End: Original strand, 34657612 - 34657691
Alignment:
Q  46 ttattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtgg 125  Q
    ||||||||| |||||||||||||||||||||||| |||||| ||||||| |||||| ||||||||||  |||||||||||    
T  34657612 ttattaaaacacttttattaattgtagttagtggagtagttaagttggatgaaattcaataaataaatgtataatagtgg 34657691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 207
Target Start/End: Original strand, 32440688 - 32440858
Alignment:
Q  39 gtattaattattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatga 138  Q
    |||||| ||| ||||| ||  |||||||||||| ||||| | |||||| ||||||| ||||| |||||||||||| || |||| |||       |||| |    
T  32440688 gtattatttactaaaacacccttattaattgtaattagtagagtagttaagttggatgaaatgtaataaataaaggtacaataatggaaaataataataa 32440787  T
Q  139 atactgcattggta--ttctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
    || |||||||| ||  ||||||| ||||||||||||| ||| | |||||||||| |||||| |||||||||    
T  32440788 atgctgcattgatattttctaaagtgacaattattttgagaaaaagaaaaaatggtaaagagacaattatt 32440858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 51 - 203
Target Start/End: Original strand, 3720296 - 3720448
Alignment:
Q  51 aaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattgg 150  Q
    |||| ||| ||||||||||||||||||||  ||||| ||||| | |||||| | |||||||   |||||||||||        ||| |||  ||||||||    
T  3720296 aaaacactcttattaattgtagttagtggaatagttaagttgaatgaaattcagtaaataagagtataatagtgggggggaaaaataaatgatgcattgg 3720395  T
Q  151 tattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaat 203  Q
     ||| |||||||||||||||||| ||| | ||||||||||||||||| |||||    
T  3720396 cattgtaaattgacaattattttgagaaaaagaaaaaatgataaagagacaat 3720448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 60 - 207
Target Start/End: Original strand, 11656010 - 11656158
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagt-ggnnnnnnntaatgaatactgcattggtattctaa 158  Q
    |||||||||||||||||||| |||||  ||||||| |||||| ||||||||| | ||||||| | ||       |||| ||| |||||||| ||||||||    
T  11656010 ttattaattgtagttagtggagtagtaaagttggatgaaattcaataaataagggtataataatgggaaaaaaataataaatgctgcattgatattctaa 11656109  T
Q  159 attgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
    | ||||||||||||| ||| | | |||||  | ||||||||||||||||    
T  11656110 agtgacaattattttgagaaaaataaaaatgggtaaagaaacaattatt 11656158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 150 - 218
Target Start/End: Complemental strand, 22398303 - 22398235
Alignment:
Q  150 gtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattattttaagacgaag 218  Q
    ||||||||||||||| |||||||| |||| || ||||| ||||||||| ||||||||||| ||||||||    
T  22398303 gtattctaaattgactattattttgagaccgaaaaaaattgataaagagacaattattttgagacgaag 22398235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 60 - 124
Target Start/End: Original strand, 31894274 - 31894338
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtg 124  Q
    |||||||||||||||||||  |||||| ||||||| |||||||||||||||| | ||||||||||    
T  31894274 ttattaattgtagttagtgaagtagttaagttggatgaaatttaataaataagggtataatagtg 31894338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 207
Target Start/End: Complemental strand, 29363356 - 29363207
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnn--taatgaatactgcattggtattcta 157  Q
    ||||||||||||||||| ||  ||||| ||||||| |||||| |||||||||   ||||||| |||         |||| ||| |||||||||||||||     
T  29363356 ttattaattgtagttagcggattagttaagttggatgaaattcaataaataagagtataataatggaaaaaataataataaatgctgcattggtattctg 29363257  T
Q  158 aattgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
    || ||||||||||||| ||| | |||||| ||| |||||| |||||||||    
T  29363256 aagtgacaattattttgagaaaaagaaaagatggtaaagagacaattatt 29363207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 39 - 215
Target Start/End: Original strand, 1063646 - 1063818
Alignment:
Q  39 gtattaattattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatga 138  Q
    |||||| ||| ||||||||| | | |||||||||||||||| |||||| ||||  | |||||||||||| ||| | ||||||  |||       |||| |    
T  1063646 gtattatttactaaaatactctgagtaattgtagttagtggagtagttaagttaaatgaaatttaataagtaagggtataatgatgg-aaaaaataataa 1063744  T
Q  139 atactgcattggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattattttaagacg 215  Q
    || || ||| |||||| |||| ||||||||||||| ||||||   ||||||| |||| ||||||||||||| |||||    
T  1063745 atgctacatcggtattttaaaatgacaattattttgagacag---aaaaatgctaaaaaaacaattattttgagacg 1063818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 3291811 - 3291883
Alignment:
Q  39 gtattaattattaaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataa 111  Q
    |||||| ||| |||||||| ||||||||||||||||||||  |||||| |||||||  ||||| |||||||||    
T  3291811 gtattatttactaaaatacctttattaattgtagttagtgaagtagttaagttggataaaattcaataaataa 3291883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 62 - 123
Target Start/End: Complemental strand, 15046171 - 15046111
Alignment:
Q  62 attaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagt 123  Q
    |||||||||||||||||| |||||| ||||||| |||||| ||||||||| | |||||||||    
T  15046171 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtataatagt 15046111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 50 - 123
Target Start/End: Complemental strand, 15058177 - 15058104
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagt 123  Q
    ||||||||  |||||||||||||||||||  ||| || ||||||| |||||| ||||||||| | |||||||||    
T  15058177 taaaatacccttattaattgtagttagtgaagtatttaagttggatgaaattcaataaataagggtataatagt 15058104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 142 - 207
Target Start/End: Complemental strand, 21010139 - 21010074
Alignment:
Q  142 ctgcattggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
    ||||||||||||| |||| ||||||||||||| ||| | |||||||||| |||| | |||||||||    
T  21010139 ctgcattggtattataaagtgacaattattttgagaaaaagaaaaaatggtaaaaagacaattatt 21010074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 125
Target Start/End: Original strand, 24983513 - 24983578
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtgg 125  Q
    |||||||||||||||||||| |||||| ||||||  |||||| ||||||||| | |||| ||||||    
T  24983513 ttattaattgtagttagtggagtagttaagttgggtgaaattcaataaataagggtatattagtgg 24983578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 1063584 - 1063623
Alignment:
Q  1 ttaaagtttatgtatgatttataagaaaatgattaattgt 40  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  1063584 ttaaagtttatgtataatttttaagaaaatgattaattgt 1063623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 121
Target Start/End: Complemental strand, 33510200 - 33510129
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataata 121  Q
    ||||||| |||||||||||||| ||| | | |||||| ||||||| |||||||| ||||||| | |||||||    
T  33510200 taaaatatttttattaattgtaattaattgagtagttaagttggatgaaatttattaaataagggtataata 33510129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 79
Target Start/End: Original strand, 13206886 - 13206915
Alignment:
Q  50 taaaatacttttattaattgtagttagtgg 79  Q
    ||||||||||||||||||||||||||||||    
T  13206886 taaaatacttttattaattgtagttagtgg 13206915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 111
Target Start/End: Complemental strand, 13909484 - 13909423
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataa 111  Q
    ||||||||  |||||||||||||||||||| ||| || |||| || |||||| |||||||||    
T  13909484 taaaatacccttattaattgtagttagtggagtaattaagttagatgaaattgaataaataa 13909423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 111
Target Start/End: Complemental strand, 17829000 - 17828939
Alignment:
Q  50 taaaatacttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataa 111  Q
    |||||||  ||||||||||||||||||||  ||| || ||||||| |||||||||| |||||    
T  17829000 taaaatatctttattaattgtagttagtgaagtaattaagttggatgaaatttaattaataa 17828939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 214
Target Start/End: Original strand, 21804691 - 21804744
Alignment:
Q  162 gacaattattttaagacagagaaaa-aatgataaagaaacaattattttaagac 214  Q
    |||||| ||||| ||| |||||||| |||||||||||||| |||||||||||||    
T  21804691 gacaataattttgagatagagaaaaaaatgataaagaaacgattattttaagac 21804744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 27367246 - 27367290
Alignment:
Q  143 tgcattggtattctaaattgacaattattttaagacagagaaaaa 187  Q
    ||||||||||||||||| ||||||||||||| ||| | |||||||    
T  27367246 tgcattggtattctaaagtgacaattattttgagaaaaagaaaaa 27367290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 27457593 - 27457637
Alignment:
Q  143 tgcattggtattctaaattgacaattattttaagacagagaaaaa 187  Q
    ||||||||||||||||| ||||||||||||| ||| | |||||||    
T  27457593 tgcattggtattctaaagtgacaattattttgagaaaaagaaaaa 27457637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 59 - 207
Target Start/End: Complemental strand, 50255 - 50107
Alignment:
Q  59 tttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaa 158  Q
    ||||||||||  ||||||||| ||| || ||||| | |||||| ||||||||| | ||||||||||        |||| ||| |||||||| ||||||||    
T  50255 tttattaattacagttagtggagtaattaagttgaatgaaattaaataaataagggtataatagtgaaaaataataataaatgctgcattgatattctaa 50156  T
Q  159 attgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
    | ||||||||||||| | | ||| |||||||| |||||| |||||||||    
T  50155 agtgacaattattttgacaaagaaaaaaaatgctaaagagacaattatt 50107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 143 - 207
Target Start/End: Complemental strand, 1523 - 1459
Alignment:
Q  143 tgcattggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattatt 207  Q
    ||||| ||||||||||| ||||||||||||||||| | |||||||||| |||||| |||||||||    
T  1523 tgcatcggtattctaaagtgacaattattttaagaaaaagaaaaaatggtaaagagacaattatt 1459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 121
Target Start/End: Complemental strand, 1753 - 1693
Alignment:
Q  61 tattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataata 121  Q
    ||||||||||||| ||||| |||||| |||||||  ||||| ||||||||| | |||||||    
T  1753 tattaattgtagtcagtggagtagttaagttggattaaattcaataaataagggtataata 1693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 204
Target Start/End: Original strand, 8046 - 8191
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnn-taatgaatactgcattggtattctaa 158  Q
    |||||||||||||||||||| ||| || ||||||| ||| || ||||||||| | ||| ||| |||        |||| ||| |||||||||||||||||    
T  8046 ttattaattgtagttagtggagtaattaagttggatgaagttcaataaataagggtattataatgggaaaaaaataataaatgctgcattggtattctaa 8145  T
Q  159 attgacaattattttaagacagagaaaaaatgataaagaaacaatt 204  Q
    | ||||||||||||| ||| | |||||||  |||||| | ||||||    
T  8146 agtgacaattattttgagaaaaagaaaaatggataaaaagacaatt 8191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 60 - 118
Target Start/End: Complemental strand, 5440 - 5382
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatata 118  Q
    ||||||||| |||||||||| |||||| ||||||| |||||| ||||||||||| ||||    
T  5440 ttattaattttagttagtggagtagttaagttggatgaaattcaataaataaaggtata 5382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 125
Target Start/End: Original strand, 34084 - 34149
Alignment:
Q  60 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtgg 125  Q
    |||||||||||||||||||   ||||| ||||||| |||||| ||||||||| | |||||||||||    
T  34084 ttattaattgtagttagtgaaatagttaagttggatgaaattcaataaataatggtataatagtgg 34149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 56610 - 56557
Alignment:
Q  162 gacaattattttaagacagagaaaaaa-tgataaagaaacaattattttaagac 214  Q
    |||||||||||| ||| |||||||||| |||||||||||| |||||||||||||    
T  56610 gacaattattttgagatagagaaaaaagtgataaagaaacgattattttaagac 56557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 217
Target Start/End: Complemental strand, 6022 - 5939
Alignment:
Q  133 taatgaatactgcattggtattctaaattgacaattattttaagacagagaaaaaatgataaagaaacaattattttaagacgaa 217  Q
    |||| ||| ||| |||| ||||||||| ||| ||||||||| ||||| ||||||| |  |||||||||||||||||| |||||||    
T  6022 taataaatgctggattgatattctaaagtgataattattttgagacaaagaaaaa-tcttaaagaaacaattattttgagacgaa 5939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 190
Target Start/End: Complemental strand, 76328 - 76212
Alignment:
Q  74 tagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggnnnnnnntaatgaatactgcattggtattctaaattgacaattatttt 173  Q
    |||||| |||||| |||| || |||||| ||||||||| | |||||||||         |||| |||||||||||| |||| || | |||||||||||||    
T  76328 tagtggagtagttaagttagatgaaattcaataaataagggtataatagtcaaaaaaaataataaatactgcattgatattatagagtgacaattatttt 76229  T
Q  174 aagacagagaaaaaatg 190  Q
    |||| | ||||||||||    
T  76228 aagaaaaagaaaaaatg 76212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 124
Target Start/End: Original strand, 14231 - 14297
Alignment:
Q  58 ttttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtg 124  Q
    ||||||||||| |||||| ||| |||||| | || || |||||| ||||||||||| ||||||||||    
T  14231 ttttattaattatagttaatggagtagttaaatttgatgaaattcaataaataaaggtataatagtg 14297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University