View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6063_low_53 (Length: 256)
Name: NF6063_low_53
Description: NF6063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6063_low_53 |
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Alignment Details
Target: chr6 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 314757 - 314994
Alignment:
| Q |
1 |
ctatatatatatggacaagctattgcattatgattgtgcactttaaagtgtacacataatatgtataaatctttgttgatttaactccatcgattacagt |
100 |
Q |
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| T |
314757 |
ctatatatatatggacaagctattgcattatgattgtgcactttaaagtgtacacataatatgtataaatctttgttgatttaactccatcgattacagt |
314856 |
T |
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| Q |
101 |
tcactgaaaaccataaagaactcgacgaggatccaattgtccactgcaatagcttgatgaaaccgttgaaatttcttgataacctttccattcttcacat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
314857 |
tcactgaaaaccataaagaactcgacgaggatccaattgtccactgcaatagcttgatgaaacagttgaaatttcttgataacctttccattcttcacat |
314956 |
T |
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| Q |
201 |
ggtttcaagataataggagtatcaatagctgctgaatt |
238 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
314957 |
ggtttcaagataataggagtatcaatagctgctgaatt |
314994 |
T |
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